Differential impacts of sewage sludge and biochar on phosphorus-related processes: An imaging study of the rhizosphere

The potential of Pseudomonas fluorescens SBW25 to produce viscosin enhances wheat root colonization and shapes root-associated microbial communities in a plant genotype-dependent manner in soil systems

Microorganisms interact with plant roots through colonization of the root surface, i.e., the rhizoplane or the surrounding soil, i.e., the rhizosphere. Beneficial rhizosphere bacteria such as Pseudomonas spp. can promote plant growth and protect against pathogens by producing a range of bioactive compounds, including specialized metabolites like cyclic lipopeptides (CLPs) known for their biosurfactant and antimicrobial activities. However, the role of CLPs in natural soil systems during bacteria-plant interactions is underexplored. Here, Pseudomonas fluorescens SBW25, producing the CLP viscosin, was used to study the impact of viscosin on bacterial root colonization and microbiome assembly in two cultivars of winter wheat (Heerup and Sheriff). We inoculated germinated wheat seeds with SBW25 wild type or a viscosin-deficient mutant and grew the plants in agricultural soil. After 2 weeks, enhanced root colonization of SBW25 wild type compared to the viscosin-deficient mutant was observed, while no differences were observed between wheat cultivars. In contrast, the impact on root-associated microbial community structure was plant-genotype-specific, and SBW25 wild type specifically reduced the relative abundance of an unclassified oomycete and Phytophthora in Sheriff and Heerup, respectively. This study provides new insights into the natural role of viscosin and specifically highlights the importance of viscosin in wheat root colonization under natural soil conditions and in shaping the root microbial communities associated with different wheat cultivars. Furthermore, it pinpoints the significance of microbial microdiversity, plant genotype, and microbe-microbe interactions when studying colonization of plant roots.

IMPORTANCE

Understanding parameters governing microbiome assembly on plant roots is critical for successfully exploiting beneficial plant-microbe interactions for improved plant growth under low-input conditions. While it is well-known from in vitro studies that specialized metabolites are important for plant-microbe interactions, e.g., root colonization, studies on the ecological role under natural soil conditions are limited. This might explain the often-low translational power from laboratory testing to field performance of microbial inoculants. Here, we showed that viscosin synthesis potential results in a differential impact on the microbiome assembly dependent on wheat cultivar, unlinked to colonization potential. Overall, our study provides novel insights into factors governing microbial assembly on plant roots, and how this has a derived but differential effect on the bacterial and protist communities.

Phosphorus Footprint in the Whole Biowaste-Biochar-Soil-Plant System: Reservation, Replenishment, and Reception

Two phosphorus (P)-rich biowastes, sewage sludge (SS) and bone dreg (BD), were selected to clarify P footprints among biowaste, biochar, soil, and plants by introducing a novel "3R" concept model. Results showed that pyrolysis resulted in P transformation from an unstable-organic amorphous phase to a stable-inorganic crystalline phase with a P retention rate of 70-90% in biochar (P reservation). In soil, SSBC released more P in acid red soil and alkaline yellow soil than BDBC, while the opposite result appeared in neutral paddy soil. The P released from SSBC formed AlPO4 by combining with Al in soil, whereas P from BDBC transformed into Ca5(PO4)3F(or Cl) in conjunction with Ca in the soil (P replenishment). Various plants exhibited an uptake of approximately 2-6 times more P from biochar-amended soil than from the original soil (P reception). This study can guide the application of biochar in various soil-plant systems for effective nutrient reclamation.