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Slimani A, Ait-El-Mokhtar M, Ben-Laouane R, Boutasknit A, Anli M, Abouraicha EF, Oufdou K, Meddich A, Baslam M. Molecular and Systems Biology Approaches for Harnessing the Symbiotic Interaction in Mycorrhizal Symbiosis for Grain and Oil Crop Cultivation. Int J Mol Sci 2024; 25:912. [PMID: 38255984 PMCID: PMC10815302 DOI: 10.3390/ijms25020912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 01/09/2024] [Accepted: 01/09/2024] [Indexed: 01/24/2024] Open
Abstract
Mycorrhizal symbiosis, the mutually beneficial association between plants and fungi, has gained significant attention in recent years due to its widespread significance in agricultural productivity. Specifically, arbuscular mycorrhizal fungi (AMF) provide a range of benefits to grain and oil crops, including improved nutrient uptake, growth, and resistance to (a)biotic stressors. Harnessing this symbiotic interaction using molecular and systems biology approaches presents promising opportunities for sustainable and economically-viable agricultural practices. Research in this area aims to identify and manipulate specific genes and pathways involved in the symbiotic interaction, leading to improved cereal and oilseed crop yields and nutrient acquisition. This review provides an overview of the research frontier on utilizing molecular and systems biology approaches for harnessing the symbiotic interaction in mycorrhizal symbiosis for grain and oil crop cultivation. Moreover, we address the mechanistic insights and molecular determinants underpinning this exchange. We conclude with an overview of current efforts to harness mycorrhizal diversity to improve cereal and oilseed health through systems biology.
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Affiliation(s)
- Aiman Slimani
- Centre d’Agrobiotechnologie et Bioingénierie, Unité de Recherche Labellisée CNRST (Centre AgroBiotech-URL-CNRST-05), Cadi Ayyad University, Marrakesh 40000, Morocco
- Laboratory of Agro-Food, Biotechnologies and Valorization of Plant Bioresources (AGROBIOVAL), Department of Biology, Faculty of Science Semlalia, Cadi Ayyad University, Marrakesh 40000, Morocco
- Laboratory of Microbial Biotechnologies, Agrosciences, and Environment, Department of Biology, Faculty of Science Semlalia, Cadi Ayyad University, Marrakesh 40000, Morocco
| | - Mohamed Ait-El-Mokhtar
- Laboratory Biochemistry, Environment & Agri-Food URAC 36, Department of Biology, Faculty of Science and Techniques—Mohammedia, Hassan II University of Casablanca, Mohammedia 28800, Morocco
| | - Raja Ben-Laouane
- Laboratory of Environment and Health, Department of Biology, Faculty of Science and Techniques, Errachidia 52000, Morocco
| | - Abderrahim Boutasknit
- Centre d’Agrobiotechnologie et Bioingénierie, Unité de Recherche Labellisée CNRST (Centre AgroBiotech-URL-CNRST-05), Cadi Ayyad University, Marrakesh 40000, Morocco
- Laboratory of Agro-Food, Biotechnologies and Valorization of Plant Bioresources (AGROBIOVAL), Department of Biology, Faculty of Science Semlalia, Cadi Ayyad University, Marrakesh 40000, Morocco
- Department of Biology, Multidisciplinary Faculty of Nador, Mohamed First University, Nador 62700, Morocco
| | - Mohamed Anli
- Laboratory of Agro-Food, Biotechnologies and Valorization of Plant Bioresources (AGROBIOVAL), Department of Biology, Faculty of Science Semlalia, Cadi Ayyad University, Marrakesh 40000, Morocco
- Department of Life, Earth and Environmental Sciences, University of Comoros, Patsy University Center, Moroni 269, Comoros
| | - El Faiza Abouraicha
- Centre d’Agrobiotechnologie et Bioingénierie, Unité de Recherche Labellisée CNRST (Centre AgroBiotech-URL-CNRST-05), Cadi Ayyad University, Marrakesh 40000, Morocco
- Laboratory of Agro-Food, Biotechnologies and Valorization of Plant Bioresources (AGROBIOVAL), Department of Biology, Faculty of Science Semlalia, Cadi Ayyad University, Marrakesh 40000, Morocco
- Higher Institute of Nursing and Health Techniques (ISPITS), Essaouira 44000, Morocco
| | - Khalid Oufdou
- Laboratory of Microbial Biotechnologies, Agrosciences, and Environment, Department of Biology, Faculty of Science Semlalia, Cadi Ayyad University, Marrakesh 40000, Morocco
| | - Abdelilah Meddich
- Centre d’Agrobiotechnologie et Bioingénierie, Unité de Recherche Labellisée CNRST (Centre AgroBiotech-URL-CNRST-05), Cadi Ayyad University, Marrakesh 40000, Morocco
- Laboratory of Agro-Food, Biotechnologies and Valorization of Plant Bioresources (AGROBIOVAL), Department of Biology, Faculty of Science Semlalia, Cadi Ayyad University, Marrakesh 40000, Morocco
| | - Marouane Baslam
- Centre d’Agrobiotechnologie et Bioingénierie, Unité de Recherche Labellisée CNRST (Centre AgroBiotech-URL-CNRST-05), Cadi Ayyad University, Marrakesh 40000, Morocco
- Laboratory of Agro-Food, Biotechnologies and Valorization of Plant Bioresources (AGROBIOVAL), Department of Biology, Faculty of Science Semlalia, Cadi Ayyad University, Marrakesh 40000, Morocco
- GrowSmart, Seoul 03129, Republic of Korea
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Rhizophagus irregularis and Azotobacter chroococcum Uphold Eggplant Production and Quality under Low Fertilization. INTERNATIONAL JOURNAL OF PLANT BIOLOGY 2022. [DOI: 10.3390/ijpb13040048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Microorganisms are essential parts of soil and play an important role in mediating many processes and influencing plant health. Arbuscular mycorrhizal fungi (AMF) and nitrogen-fixing bacteria (NFB), the most common of such microorganisms, can benefit plants by enhancing the nutrient-absorbing ability of roots through bio-inoculation, also called biofertilization. Different methods have been tested and proven to be effective in the enhancement of soil nutrient availability. However, the effects of increased application of biological methods with minimal chemical fertilizers are still inconsistent. In this 2-year of fixed-point greenhouse test, we aimed to evaluate the impact of AMF (Rhizophagus irregularis) and/or NFB (Azotobacter) on growth, quality, and yield of eggplants under different N levels. Data showed that biofertilizer application with reduced chemical fertilizer had the highest impact on eggplant performance and yield. Indeed, low chemical fertilizers combined with adequate amounts of biofertilizers produced a higher plant height, length and width of leaves, dry matter, number of fruits per plant with better morphology, total yield per plant, and total soluble solids (TSS), suggesting that the use of Azotobacter and R. irregularis as biofertilizers could substantially reduce the use of chemical fertilizers without impairing the quality and yield of eggplant.
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Anand U, Vaishnav A, Sharma SK, Sahu J, Ahmad S, Sunita K, Suresh S, Dey A, Bontempi E, Singh AK, Proćków J, Shukla AK. Current advances and research prospects for agricultural and industrial uses of microbial strains available in world collections. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 842:156641. [PMID: 35700781 DOI: 10.1016/j.scitotenv.2022.156641] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Revised: 06/08/2022] [Accepted: 06/08/2022] [Indexed: 06/15/2023]
Abstract
Microorganisms are an important component of the ecosystem and have an enormous impact on human lives. Moreover, microorganisms are considered to have desirable effects on other co-existing species in a variety of habitats, such as agriculture and industries. In this way, they also have enormous environmental applications. Hence, collections of microorganisms with specific traits are a crucial step in developing new technologies to harness the microbial potential. Microbial culture collections (MCCs) are a repository for the preservation of a large variety of microbial species distributed throughout the world. In this context, culture collections (CCs) and microbial biological resource centres (mBRCs) are vital for the safeguarding and circulation of biological resources, as well as for the progress of the life sciences. Ex situ conservation of microorganisms tagged with specific traits in the collections is the crucial step in developing new technologies to harness their potential. Type strains are mainly used in taxonomic study, whereas reference strains are used for agricultural, biotechnological, pharmaceutical research and commercial work. Despite the tremendous potential in microbiological research, little effort has been made in the true sense to harness the potential of conserved microorganisms. This review highlights (1) the importance of available global microbial collections for man and (2) the use of these resources in different research and applications in agriculture, biotechnology, and industry. In addition, an extensive literature survey was carried out on preserved microorganisms from different collection centres using the Web of Science (WoS) and SCOPUS. This review also emphasizes knowledge gaps and future perspectives. Finally, this study provides a critical analysis of the current and future roles of microorganisms available in culture collections for different sustainable agricultural and industrial applications. This work highlights target-specific potential microbial strains that have multiple important metabolic and genetic traits for future research and use.
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Affiliation(s)
- Uttpal Anand
- Department of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva 84105, Israel
| | - Anukool Vaishnav
- Department of Biotechnology, Institute of Applied Sciences & Humanities, GLA University, Mathura, Uttar Pradesh 281406, India; Department of Plant and Microbial Biology, University of Zürich, Zollikerstrasse 107, CH-8008 Zürich, Switzerland; Plant-Soil Interaction Group, Agroscope (Reckenholz), Reckenholzstrasse 191, 8046 Zürich, Switzerland
| | - Sushil K Sharma
- National Agriculturally Important Microbial Culture Collection (NAIMCC), ICAR-National Bureau of Agriculturally Important Microorganisms (ICAR-NBAIM), Mau 275 103, Uttar Pradesh, India.
| | - Jagajjit Sahu
- GyanArras Academy, Gothapatna, Malipada, Bhubaneswar, Odisha 751029, India
| | - Sarfaraz Ahmad
- Department of Botany, Jai Prakash University, Saran, Chhapra 841301, Bihar, India
| | - Kumari Sunita
- Department of Botany, Faculty of Science, Deen Dayal Upadhyay Gorakhpur University, Gorakhpur, Uttar Pradesh 273009, India
| | - S Suresh
- Department of Chemical Engineering, Maulana Azad National Institute of Technology, Bhopal 462 003, Madhya Pradesh, India
| | - Abhijit Dey
- Department of Life Sciences, Presidency University, 86/1 College Street, Kolkata 700073, West Bengal, India
| | - Elza Bontempi
- INSTM and Chemistry for Technologies Laboratory, Department of Mechanical and Industrial Engineering, University of Brescia, Via Branze, 38, 25123 Brescia, Italy
| | - Amit Kishore Singh
- Department of Botany, Bhagalpur National College, (A Constituent unit of Tilka Manjhi Bhagalpur University), Bhagalpur 812007, Bihar, India
| | - Jarosław Proćków
- Department of Plant Biology, Institute of Environmental Biology, Wrocław University of Environmental and Life Sciences, Kożuchowska 5b, 51-631 Wrocław, Poland.
| | - Awadhesh Kumar Shukla
- Department of Botany, K.S. Saket P.G. College, Ayodhya (affiliated to Dr. Rammanohar Lohia Avadh University, Ayodhya) 224123, Uttar Pradesh, India.
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Mi S, Wang Y, Zhang X, Sang Y, Wang X. Authentication of the geographical origin of sesame seeds based on proximate composition, multi-element and volatile fingerprinting combined with chemometrics. Food Chem 2022; 397:133779. [PMID: 35914458 DOI: 10.1016/j.foodchem.2022.133779] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2022] [Revised: 06/28/2022] [Accepted: 07/22/2022] [Indexed: 11/19/2022]
Abstract
The current study was designed to discriminate and authenticate sesame seeds cultivated in China, Togo, Sudan, Mozambique and Ethiopia. Fingerprinting analysis combined with chemometrics was applied to clarify the differences present in the chemical elements and volatiles of sesame seeds. Clear separations were observed among different groups of sesame seeds. Discrimination models were established with 100 % correction rate for the authentication of investigated sesame seeds. A panel of 14 chemical elements and 12 volatile compounds with p value < 0.05 and VIP score > 1 was suggested as important contributors for the discrimination of sesame seeds from China, Togo, Sudan, Mozambique and Ethiopia. In conclusion, our data demonstrate that chemical analysis together with chemometrics is of great applicability to authenticate the geographical origins of sesame seeds.
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Affiliation(s)
- Si Mi
- College of Food Science and Technology, Hebei Agricultural University, Baoding 071000, China
| | - Yuhang Wang
- College of Food Science and Technology, Hebei Agricultural University, Baoding 071000, China
| | - Xiangnan Zhang
- College of Food Science and Technology, Hebei Agricultural University, Baoding 071000, China
| | - Yaxin Sang
- College of Food Science and Technology, Hebei Agricultural University, Baoding 071000, China
| | - Xianghong Wang
- College of Food Science and Technology, Hebei Agricultural University, Baoding 071000, China.
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Mi S, Wang Y, Zhang X, Sang Y, Wang X. Discrimination of Black and White Sesame Seeds Based on Targeted and Non-Targeted Platforms with Chemometrics: From Profiling towards Identification of Chemical Markers. Foods 2022; 11:foods11142042. [PMID: 35885285 PMCID: PMC9315883 DOI: 10.3390/foods11142042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Revised: 07/04/2022] [Accepted: 07/05/2022] [Indexed: 02/05/2023] Open
Abstract
The present study was conducted to clarify the differences in the multi-element, volatile organic compound, fatty acid, and metabolite fingerprints between black and white sesame seeds. A total of 53 chemical elements, 32 volatile flavor compounds, 40 fatty acids, and 283 metabolites were identified and evaluated in the two groups of sesame seeds. Univariate and multivariate statistics indicated a distinct separation between the two groups of sesame seeds. A panel of 16 chemical elements, 3 volatile compounds, 8 individual fatty acids, and 54 metabolites with p value < 0.05 and variable importance in projection score > 1 were selected as the most important discriminants for the two types of sesame seeds. Overall, these data reveal the influence of genotype on the chemical composition of sesame seeds. Our findings also demonstrate that the hybrid model of instrumental analysis and chemometrics is feasible for the discrimination of black and white sesame seeds.
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Srivastava A, Sharma VK, Kaushik P, El-Sheikh MA, Qadir S, Mansoor S. Effect of silicon application with mycorrhizal inoculation on Brassica juncea cultivated under water stress. PLoS One 2022; 17:e0261569. [PMID: 35389996 PMCID: PMC8989204 DOI: 10.1371/journal.pone.0261569] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2021] [Accepted: 12/05/2021] [Indexed: 11/18/2022] Open
Abstract
Brassica juncea L. is a significant member of the Brassicaceae family, also known as Indian mustard. Water is a limiting factor in the successful production of this crop. Here, we tested the effect of water shortage in B. juncea plants supplemented with or without the application of silicon and arbuscular mycorrhizal fungi in total 8 different treatments compared under open filed conditions using a randomised complete block design (RCBD). The treatments under control conditions were control (C, T1); C+Silicon (Si, T2); C+My (Mycorrhiza; T3); and C+Si+My (T4). In contrast, treatments under stress conditions were S (Stress; T5); S+Si (T6); S+My (T7) and S+Si+My (T8), respectively. In total, we evaluated 16 traits, including plant response to stress by evaluating peroxidase (POD), superoxide dismutase (SOD), and catalase (CAT) activity. The fresh weight (g) increased only 7.47 percent with mycorrhiza (C+My) and 22.39 percent with silicon (C+Si) but increased 291.08 percent with both mycorrhiza and silicon (C+Si+My). Using mycorrhiza (S+My) or silicon (S+Si) alone produced a significant increase of 53.16 percent and 55.84 percent in fresh weight, respectively, while using both mycorrhiza and silicon (S+Si+My) together produced a dramatic increase of 380.71 percent under stress conditions. Superoxidase dismutase concentration (Ug−1 FW) was found to be increased by 29.48 percent, 6.71 percent, and 22.63 percent after applying C+My, C+Si and C+Si+My, but treatment under stress revealed some contrasting trends, with an increase of 11.21 percent and 19.77 percent for S+My, S+Si+My, but a decrease of 13.15 percent for S+Si. Finally, in the presence of stress, carotenoid content (mg/g FW) increased by 58.06 percent, 54.83 percent, 183.87 percent with C+My, and 23.81 percent with S+My and S+Si+My, but decreased by 22.22 percent with S+Si. Silicon application proved to be more effective than AMF treatment with Rhizophagus irregularis, and the best results were obtained with the combination of Si and AMF. This work will help to suggest the measures to overcome the water stress in B. juncea.
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Affiliation(s)
- Ashutosh Srivastava
- Department of Botany, Rani Lakshmi Bai Central Agricultural University, Jhansi, Uttar Pradesh
| | - Vijay Kumar Sharma
- Department Genetics and Plant Breeding, Banda University of Agriculture and Technology, Banda, Uttar Pradesh, India
| | - Prashant Kaushik
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Valencia, Spain
- * E-mail: ,
| | - Mohamed A. El-Sheikh
- Botany and Microbiology Department College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Shaista Qadir
- Department of Botany, Womens College, Srinagar, Jammu and Kashmir, India
| | - Sheikh Mansoor
- Division of Biochemistry FBSc, SKUAST Jammu J&K, Jammu and Kashmir, India
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Ezzati Lotfabadi Z, Weisany W, Abdul-Razzak Tahir N, Mohammadi Torkashvand A. Arbuscular mycorrhizal fungi species improve the fatty acids profile and nutrients status of soybean cultivars grown under drought stress. J Appl Microbiol 2022; 132:2177-2188. [PMID: 34651381 DOI: 10.1111/jam.15326] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 08/05/2021] [Accepted: 10/04/2021] [Indexed: 12/21/2022]
Abstract
AIMS To investigate the effects of arbuscular mycorrhizal fungi (AMF) species on the absorption and distribution of mineral nutrients in soybean cultivars under drought stress, an experiment was carried out through a factorial method in the form of randomized complete blocks with six replicates in 2020. METHODS AND RESULTS Experimental factors include: drought stress at three irrigation levels (well-watered [WW], medium stress [MS] and severe stress [SS], i.e., 100%, 70% and 40% FC), soybean cultivars at two levels (Sepideh and Williams), and mycorrhizae application at four levels (nonapplication, Funneliformis mosseae, Glomus hoi, Rhizophagus intraradices). The results indicated that drought stress increased the concentration of grain potassium (K) and sodium (Na), leaf K, stem and leaf Na, and decreased the concentrations of grain phosphorus (P), copper (Cu), and zinc (Zn), leaf P, stem and leaf Cu, and manganese (Mn). In addition, there was no significant difference in terms of concentrations of grain K. The highest reduction was observed under SS conditions (40% FC). G. hoi colonization increased the concentrations of grain P and Zn, leaf K and Cu and stem Mn under SS conditions (40% FC). In addition, compared to Sepideh cv., Williams cv. showed higher stress resistance. Seed oil content decreased in the plants exposed to drought stress. Severe drought treatments have a deleterious effect on seed fatty acid composition, resulting in enhanced linoleic, oleic and linolenic acids. CONCLUSION AMF colonization is a useful tool for improving the plant nutrient uptake, fatty acid profile, efficiency of resource utilization and stabilizing yield, hence reducing the production risks of crops grown under drought stress conditions. It was concluded that AMF colonization should be employed to help alleviate the adverse effects of drought stress. SIGNIFICANCE OF STUDY AMF colonization is an effective biotechnological strategy that can alter nutrient uptake and fatty acid composition and enhance oil quality in soybean cultivars under drought conditions.
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Affiliation(s)
- Zahra Ezzati Lotfabadi
- Department of Agriculture and Food Science, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Weria Weisany
- Department of Agriculture and Food Science, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Nawroz Abdul-Razzak Tahir
- Horticulture Department, College of Agricultural Engineering Sciences, University of Sulaimani, Sulaimani, Iraq
| | - Ali Mohammadi Torkashvand
- Department of Agriculture and Food Science, Science and Research Branch, Islamic Azad University, Tehran, Iran
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Glomus mosseae and Pseudomonas fluorescens Application Sustains Yield and Promote Tolerance to Water Stress in Helianthus annuus L. STRESSES 2021. [DOI: 10.3390/stresses1040022] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
The inoculation of sunflower (Helianthus annuus L.) plants with arbuscular mycorrhizal fungi (AMF) and plant growth-promoting rhizobacteria (PGPR) can significantly enhance its growth and yield in a sustainable manner. Drought tolerance is mediated by a combination of direct AMF and PGPR benefits that boost the plant’s natural ability to cope with stress, whereas drought mitigation is mediated by indirect AMF and PGPR benefits and increased water uptake. An experiment was carried out to demonstrate the interactive effects of AMF (Glomus mosseae) alone or in association with PGPR (Pseudomonas fluorescens) under water-stressed conditions in order to assess their biofertilizer efficiency. Accordingly, various morphological and biochemical parameters were studied, and the results suggested that all the co-inoculation treatments displayed beneficial effects. Still, the combination of G. mosseae + P. fluorescens showed the maximum increment in all the parameters considered, i.e., plant height and weight, leaves length and width, number of leaves per plant, specific leaf weight, relative leaf water content (RLWC), photosynthetic efficiency, seed length, width, and area, seed yield per plant, number of seeds per flower, days to 50% flowering, days to maturity, flower and head diameter, harvest index, oil content, fatty acid composition (palmitic acid, oleic acid, stearic acid, and linoleic acid), and total yield. The improvement in different parameters may be attributed to the increased availability of nutrients due to the symbiotic association of AMF and PGPR with plant roots along with enhanced root structures for more water absorption under stressed conditions. Therefore, the results suggested that they offer a promising bio-control strategy for crop protection as biofertilizers combined in one formulation.
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