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Tahmasebi P, Farokhi S, Ahmadi G, Roushani M. Electrochemical impedance biosensor based on Y chromosome-specific sequences for fetal sex determination. Mikrochim Acta 2023; 190:483. [PMID: 38006412 DOI: 10.1007/s00604-023-06061-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Accepted: 10/19/2023] [Indexed: 11/27/2023]
Abstract
A new electrochemical biosensor based on the sequence of chromosome Y (SRY) has been introduced to determine the gender of the fetus. At first, the DNA probe was designed based on the SRY gene sequence on chromosome Y. Then, a suitable functional group was added to the DNA probe, and it has been immobilized on the surface of the electrode modified with a nanocomposite containing Cu(OH)2 @N-C n-boxes. This substrate causes more DNA probes to connect to the electrode surface by increasing the effective surface area. The presence of the SRY sequence in the DNA sample extracted from blood was detected by the electrochemical signal of the bio-sensor. After optimizing the parameters, the fabricated genosensor showed linear responses in the two concentration ranges containing 0.5 fM to 50 pM and 50 pM to 500 nM. The limit of detection (LOD) for the proposed method was 0.16 fM. The proposed genosensor has been successfully used to determine the gender of the fetus using cell-free fetal DNA (cffDNA) in the blood plasma of several pregnant mothers. This method has advantages such as being simple, portable, accurate, and non-invasive for early determination of the gender of the fetus and early diagnosis of X-linked genetic disorders.
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Affiliation(s)
- Parisa Tahmasebi
- Department of Biology, Faculty of Science, Ilam University, Ilam, Iran.
| | - Somayeh Farokhi
- Department of Chemistry, Faculty of Sciences, Ilam University, Ilam, Iran
| | - Gelavizh Ahmadi
- Department of Biology, Faculty of Science, Ilam University, Ilam, Iran
| | - Mahmoud Roushani
- Department of Chemistry, Faculty of Sciences, Ilam University, Ilam, Iran.
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2
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Almunla M, Tepeli Büyüksünetçi Y, Akpolat O, Anık Ü. Development of Apple Tissue Based Biocathode and MWCNT−Pt−Au Nanomaterial Based Bioanode Biofuel Cell. ELECTROANAL 2020. [DOI: 10.1002/elan.202060425] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Moustafa Almunla
- Department of Bioinformatics Graduate School of Natural and Applied Sciences Muğla Sıtkı Kocman University Turkey
| | | | - Oğuz Akpolat
- Muğla Sıtkı Kocman University Faculty of Science Chemistry Department 48000- Kotekli Muğla Turkey
| | - Ülkü Anık
- Department of Bioinformatics Graduate School of Natural and Applied Sciences Muğla Sıtkı Kocman University Turkey
- Muğla Sıtkı Kocman University Faculty of Science Chemistry Department 48000- Kotekli Muğla Turkey
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3
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Stojanov S, Berlec A. Electrospun Nanofibers as Carriers of Microorganisms, Stem Cells, Proteins, and Nucleic Acids in Therapeutic and Other Applications. Front Bioeng Biotechnol 2020; 8:130. [PMID: 32158751 PMCID: PMC7052008 DOI: 10.3389/fbioe.2020.00130] [Citation(s) in RCA: 79] [Impact Index Per Article: 19.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Accepted: 02/10/2020] [Indexed: 11/13/2022] Open
Abstract
Electrospinning is a technique that uses polymer solutions and strong electric fields to produce nano-sized fibers that have wide-ranging applications. We present here an overview of the use of electrospinning to incorporate biological products into nanofibers, including microorganisms, cells, proteins, and nucleic acids. Although the conditions used during electrospinning limit the already problematic viability/stability of such biological products, their effective incorporation into nanofibers has been shown to be feasible. Synthetic polymers have been more frequently applied to make nanofibers than natural polymers. Polymer blends are commonly used to achieve favorable physical properties of nanofibers. The majority of nanofibers that contain biological product have been designed for therapeutic applications. The incorporation of these biological products into nanofibers can promote their stability or viability, and also allow their delivery to a desired tissue or organ. Other applications include plant protection in agriculture, fermentation in the food industry, biocatalytic environmental remediation, and biosensing. Live cells that have been incorporated into nanofibers include bacteria and fungi. Nanofibers have served as scaffolds for stem cells seeded on a surface, to enable their delivery and application in tissue regeneration and wound healing. Viruses incorporated into nanofibers have been used in gene delivery, as well as in therapies against bacterial infections and cancers. Proteins (hormones, growth factors, and enzymes) and nucleic acids (DNA and RNA) have been incorporated into nanofibers, mainly to treat diseases and enhance their stability. To summarize, incorporation of biological products into nanofibers has numerous advantages, such as providing protection and facilitating controlled delivery from a solid form with a large surface area. Future studies should address the challenge of transferring nanofibers with biological products into practical and industrial use.
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Affiliation(s)
- Spase Stojanov
- Department of Biotechnology, Jožef Stefan Institute, Ljubljana, Slovenia
- Faculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia
| | - Aleš Berlec
- Department of Biotechnology, Jožef Stefan Institute, Ljubljana, Slovenia
- Faculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia
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4
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Affiliation(s)
| | - Özgul Haklı
- Muğla Sıtkı Koçman UniversityFaculty of Science, Chemistry Department 48000- Kötekli Mugla TURKEY
| | - Ülkü Anik
- Muğla Sıtkı Koçman UniversityFaculty of Science, Chemistry Department 48000- Kötekli Mugla TURKEY
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5
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Bio-assay: The best alternative for conventional methods in detection of epidermal growth factor. Int J Biol Macromol 2019; 133:624-639. [DOI: 10.1016/j.ijbiomac.2019.04.121] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Revised: 04/15/2019] [Accepted: 04/16/2019] [Indexed: 01/01/2023]
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6
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Sai-Anand G, Sivanesan A, Benzigar MR, Singh G, Gopalan AI, Baskar AV, Ilbeygi H, Ramadass K, Kambala V, Vinu A. Recent Progress on the Sensing of Pathogenic Bacteria Using Advanced Nanostructures. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2019. [DOI: 10.1246/bcsj.20180280] [Citation(s) in RCA: 92] [Impact Index Per Article: 18.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Gopalan Sai-Anand
- Global Innovative Center for Advanced Nanomaterials, Faculty of Built Environment and Engineering, The University of Newcastle, Callaghan 2308, New South Wales, Australia
- Future Industries Institute, Division of Information Technology, Engineering and Environment, University of South Australia, Mawson Lakes, South Australia 5095, Australia
| | - Arumugam Sivanesan
- Future Industries Institute, Division of Information Technology, Engineering and Environment, University of South Australia, Mawson Lakes, South Australia 5095, Australia
- Metrohm Australia, 56 Buffalo Road, Gladesville, NSW 2111, Australia
| | - Mercy R Benzigar
- Future Industries Institute, Division of Information Technology, Engineering and Environment, University of South Australia, Mawson Lakes, South Australia 5095, Australia
| | - Gurwinder Singh
- Global Innovative Center for Advanced Nanomaterials, Faculty of Built Environment and Engineering, The University of Newcastle, Callaghan 2308, New South Wales, Australia
- Future Industries Institute, Division of Information Technology, Engineering and Environment, University of South Australia, Mawson Lakes, South Australia 5095, Australia
| | - Anantha-Iyengar Gopalan
- Research Institute of Advanced Energy Technology, Kyungpook National University, Daegu 41566, Korea
| | - Arun Vijay Baskar
- Global Innovative Center for Advanced Nanomaterials, Faculty of Built Environment and Engineering, The University of Newcastle, Callaghan 2308, New South Wales, Australia
- Future Industries Institute, Division of Information Technology, Engineering and Environment, University of South Australia, Mawson Lakes, South Australia 5095, Australia
| | - Hamid Ilbeygi
- Future Industries Institute, Division of Information Technology, Engineering and Environment, University of South Australia, Mawson Lakes, South Australia 5095, Australia
| | - Kavitha Ramadass
- Global Innovative Center for Advanced Nanomaterials, Faculty of Built Environment and Engineering, The University of Newcastle, Callaghan 2308, New South Wales, Australia
- Future Industries Institute, Division of Information Technology, Engineering and Environment, University of South Australia, Mawson Lakes, South Australia 5095, Australia
| | - Venkata Kambala
- Hudson Marketing Pty Ltd, Level 2/131 Macquarie St, Sydney NSW 2000, Australia
| | - Ajayan Vinu
- Global Innovative Center for Advanced Nanomaterials, Faculty of Built Environment and Engineering, The University of Newcastle, Callaghan 2308, New South Wales, Australia
- Future Industries Institute, Division of Information Technology, Engineering and Environment, University of South Australia, Mawson Lakes, South Australia 5095, Australia
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7
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Alizadeh N, Salimi A. Ultrasensitive Bioaffinity Electrochemical Sensors: Advances and New Perspectives. ELECTROANAL 2018. [DOI: 10.1002/elan.201800598] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Negar Alizadeh
- Department of ChemistryUniversity of Kurdistan 66177-15175 Sanandaj Iran
| | - Abdollah Salimi
- Department of ChemistryUniversity of Kurdistan 66177-15175 Sanandaj Iran
- Research Center for NanotechnologyUniversity of Kurdistan 66177-15175 Sanandaj Iran
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8
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Tripathy S, Gangwar R, Supraja P, Rao AVSSN, Vanjari SRK, Singh SG. Graphene Doped Mn2
O3
Nanofibers as a Facile Electroanalytical DNA Point Mutation Detection Platform for Early Diagnosis of Breast/Ovarian Cancer. ELECTROANAL 2018. [DOI: 10.1002/elan.201800220] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
| | - Rahul Gangwar
- Indian Institute of Technology; Hyderabad, Telangana India- 502285
| | - Patta Supraja
- Indian Institute of Technology; Hyderabad, Telangana India- 502285
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9
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Fabrication of nickel coated graphene oxide composite electrode for sensitive determination of Rutin. J Electroanal Chem (Lausanne) 2018. [DOI: 10.1016/j.jelechem.2018.02.049] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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10
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Highly sensitive and reproducible non-enzymatic glucose sensor fabricated by drop-casting novel nanocomposite with 3D architecture and tailorable properties prepared in controllable way. Talanta 2018; 180:133-143. [DOI: 10.1016/j.talanta.2017.12.052] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2017] [Revised: 12/03/2017] [Accepted: 12/14/2017] [Indexed: 11/22/2022]
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11
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Anik Ü, Tepeli Y, Sayhi M, Nsiri J, Diouani MF. Towards the electrochemical diagnostic of influenza virus: development of a graphene–Au hybrid nanocomposite modified influenza virus biosensor based on neuraminidase activity. Analyst 2018; 143:150-156. [DOI: 10.1039/c7an01537b] [Citation(s) in RCA: 43] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
An effective electrochemical influenza A biosensor based on a graphene–gold (Au) hybrid nanocomposite modified Au-screen printed electrode has been developed.
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Affiliation(s)
- Ülkü Anik
- Mugla Sitki Kocman University
- Faculty of Science
- Chemistry Department
- Kotekli/Mugla
- Turkey
| | - Yudum Tepeli
- Mugla Sitki Kocman University
- Faculty of Science
- Chemistry Department
- Kotekli/Mugla
- Turkey
| | - Maher Sayhi
- Laboratory of Epidemiology and Veterinary Microbiology (LEMV)
- Institut Pasteur de Tunis
- University of Tunis El Manar
- LR11IPT03
- Tunis-Belvédère 1002
| | - Jihene Nsiri
- Laboratory of Epidemiology and Veterinary Microbiology (LEMV)
- Institut Pasteur de Tunis
- University of Tunis El Manar
- LR11IPT03
- Tunis-Belvédère 1002
| | - Mohamed Fethi Diouani
- Laboratory of Epidemiology and Veterinary Microbiology (LEMV)
- Institut Pasteur de Tunis
- University of Tunis El Manar
- LR11IPT03
- Tunis-Belvédère 1002
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12
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Kalyoncu D, Tepeli Y, Kirgöz UC, Buyraç A, Anik Ü. Electro-nano Diagnostic Platforms for Simultaneous Detection of Multiple Cancer Biomarkers. ELECTROANAL 2017. [DOI: 10.1002/elan.201700556] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Dorukhan Kalyoncu
- Mugla Sitki Kocman University, Faculty of Science; Chemistry Department; Kotekli/Mugla
| | - Yudum Tepeli
- Mugla Sitki Kocman University, Faculty of Science; Chemistry Department; Kotekli/Mugla
| | - Umut Can Kirgöz
- Isikkent High School; 6240/5 St.No:3 35070 Yesilova/Izmir Turkey
| | - Arda Buyraç
- Isikkent High School; 6240/5 St.No:3 35070 Yesilova/Izmir Turkey
| | - Ülkü Anik
- Mugla Sitki Kocman University, Faculty of Science; Chemistry Department; Kotekli/Mugla
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13
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Hasanzadeh M, Shadjou N. (Nano)-materials and methods of signal enhancement for genosensing of p53 tumor suppressor protein: Novel research overview. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2017; 76:1424-1439. [DOI: 10.1016/j.msec.2017.02.038] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2016] [Revised: 02/07/2017] [Accepted: 02/09/2017] [Indexed: 12/22/2022]
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14
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Recent progress in electrochemical sensing of cardiac troponin by using nanomaterial-induced signal amplification. Mikrochim Acta 2017. [DOI: 10.1007/s00604-017-2219-y] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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15
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Tepeli Y, Anik U. Preparation, Characterization and Electrochemical Application of Graphene-metallic Nanocomposites. ELECTROANAL 2016. [DOI: 10.1002/elan.201600369] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Yudum Tepeli
- Mugla Sitki Kocman University; Faculty of Science; Chemistry Department; 48000 Kotekli-Mugla TURKEY
| | - Ulku Anik
- Mugla Sitki Kocman University; Faculty of Science; Chemistry Department; 48000 Kotekli-Mugla TURKEY
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16
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17
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Li SJ, Hou LL, Yuan BQ, Chang MZ, Ma Y, Du JM. Enzyme-free glucose sensor using a glassy carbon electrode modified with reduced graphene oxide decorated with mixed copper and cobalt oxides. Mikrochim Acta 2016. [DOI: 10.1007/s00604-016-1817-4] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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18
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Anik Ü, Timur S. Towards the electrochemical diagnosis of cancer: nanomaterial-based immunosensors and cytosensors. RSC Adv 2016. [DOI: 10.1039/c6ra23686c] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
In this review, nanomaterial based electrochemical biosensors including electrochemical immunosensors and cytosensors towards cancer detection are covered.
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Affiliation(s)
- Ülkü Anik
- Mugla Sitki Kocman University
- Faculty of Science
- Chemistry Department
- 48000 Mugla
- Turkey
| | - Suna Timur
- Ege University
- Faculty of Science
- Biochemistry Department
- İzmir
- Turkey
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19
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Zou C, Zhong J, Wang J, Shiraishi Y, Li S, Yan B, Guo J, Du Y. Fabrication of reduced graphene oxide–bimetallic Pd@Au nanocomposites for simultaneous determination of ascorbic acid, dopamine and uric acid. RSC Adv 2016. [DOI: 10.1039/c6ra18254b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The Pd@Au/RGO plays a critical important role in facilitating the electron transfer capability and promoting the highly efficient electrocatalytic performance in the simultaneous determination of AA, UA and DA.
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Affiliation(s)
- Cui'e Zou
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- PR China
| | - Jiatai Zhong
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- PR China
| | - Jin Wang
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- PR China
| | | | - Shumin Li
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- PR China
| | - Bo Yan
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- PR China
| | - Jun Guo
- Testing and Analysis Center
- Soochow University
- Suzhou
- 215123 PR China
| | - Yukou Du
- College of Chemistry
- Chemical Engineering and Materials Science
- Soochow University
- Suzhou 215123
- PR China
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20
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Gutiérrez A, Gutierrez FA, Eguílaz M, González-Domínguez JM, Hernández-Ferrer J, Ansón-Casaos A, Martínez MT, Rivas GA. Electrochemical sensing of guanine, adenine and 8-hydroxy-2′-deoxyguanosine at glassy carbon modified with single-walled carbon nanotubes covalently functionalized with lysine. RSC Adv 2016. [DOI: 10.1039/c5ra22556f] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Synthesis and characterization of l-lysine covalently functionalized SWCNT and analytical application for the highly sensitive quantification of guanine, adenine and 8-hydroxy-2′-deoxyguanosine.
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Affiliation(s)
- Alejandro Gutiérrez
- INFIQC
- Departamento de Físico Química
- Facultad de Ciencias Químicas
- Universidad Nacional de Córdoba
- Ciudad Universitaria
| | - Fabiana A. Gutierrez
- INFIQC
- Departamento de Físico Química
- Facultad de Ciencias Químicas
- Universidad Nacional de Córdoba
- Ciudad Universitaria
| | - Marcos Eguílaz
- INFIQC
- Departamento de Físico Química
- Facultad de Ciencias Químicas
- Universidad Nacional de Córdoba
- Ciudad Universitaria
| | | | | | | | | | - Gustavo A. Rivas
- INFIQC
- Departamento de Físico Química
- Facultad de Ciencias Químicas
- Universidad Nacional de Córdoba
- Ciudad Universitaria
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21
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Aslan S, Anik Ü. Microbial glucose biosensors based on glassy carbon paste electrodes modified with Gluconobacter Oxydans and graphene oxide or graphene-platinum hybrid nanoparticles. Mikrochim Acta 2015. [DOI: 10.1007/s00604-015-1590-9] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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22
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Tepeli Y, Anik U. Comparison of performances of bioanodes modified with graphene oxide and graphene–platinum hybrid nanoparticles. Electrochem commun 2015. [DOI: 10.1016/j.elecom.2015.05.002] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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23
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Tepeli Y, Demir B, Timur S, Anik U. An electrochemical cytosensor based on a PAMAM modified glassy carbon paste electrode. RSC Adv 2015. [DOI: 10.1039/c5ra07893h] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Electrochemical detection of HeLa cancer cells with GCPE/AuNp/Cys/Glu/PAMAM/FA cytosensor.
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Affiliation(s)
- Yudum Tepeli
- Mugla Sitki Kocman University
- Faculty of Science
- Chemistry Department
- 48000-Kotekli
- Turkey
| | - Bilal Demir
- Ege University
- Faculty of Science
- Department of Biochemistry
- Izmir
- Turkey
| | - Suna Timur
- Ege University
- Faculty of Science
- Department of Biochemistry
- Izmir
- Turkey
| | - Ulku Anik
- Mugla Sitki Kocman University
- Faculty of Science
- Chemistry Department
- 48000-Kotekli
- Turkey
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