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Recknagel H, Zakšek V, Delić T, Gorički Š, Trontelj P. Multiple transitions between realms shape relict lineages of Proteus cave salamanders. Mol Ecol 2024; 33:e16868. [PMID: 36715250 DOI: 10.1111/mec.16868] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 01/16/2023] [Indexed: 01/31/2023]
Abstract
In comparison to biodiversity on Earth's surface, subterranean biodiversity has largely remained concealed. The olm (Proteus anguinus) is one of the most enigmatic extant cave inhabitants, and until now little was known regarding its genetic structure and evolutionary history. Olms inhabit subterranean waters throughout the Dinaric Karst of the western Balkans, with a seemingly uniform phenotypic appearance of cave-specialized traits: an elongate body, snout and limbs, degenerated eyes and loss of pigmentation ("white olm"). Only a single small region in southeastern Slovenia harbours olms with a phenotype typical of surface animals: pigmented skin, eyes, a blunt snout and short limbs ("black olm"). We used a combination of mitochondrial DNA and genome-wide single nucleotide polymorphism data to investigate the molecular diversity, evolutionary history and biogeography of olms along the Dinaric Karst. We found nine deeply divergent species-level lineages that separated between 17 and 4 million years ago, while molecular diversity within lineages was low. We detected no signal of recent admixture between lineages and only limited historical gene flow. Biogeographically, the contemporaneous distribution of lineages mostly mirrors hydrologically separated subterranean environments, while the historical separation of olm lineages follows microtectonic and climatic changes in the area. The reconstructed phylogeny suggests at least four independent transitions to the cave phenotype. Two of the species-level lineages have miniscule ranges and may represent Europe's rarest amphibians. Their rarity and the decline in other lineages call for protection of their subterranean habitats.
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Affiliation(s)
- H Recknagel
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
| | - V Zakšek
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
| | - T Delić
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
| | - Š Gorički
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
- Scriptorium biologorum, Murska Sobota, Slovenia
| | - P Trontelj
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
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Post-collisional mantle delamination in the Dinarides implied from staircases of Oligo-Miocene uplifted marine terraces. Sci Rep 2021; 11:2685. [PMID: 33514786 PMCID: PMC7846848 DOI: 10.1038/s41598-021-81561-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2020] [Accepted: 12/28/2020] [Indexed: 11/08/2022] Open
Abstract
The Dinarides fold-thrust belt on the Balkan Peninsula resulted from convergence between the Adriatic and Eurasian plates since Mid-Jurassic times. Under the Dinarides, S-wave receiver functions, P-wave tomographic models, and shear-wave splitting data show anomalously thin lithosphere overlying a short down-flexed slab geometry. This geometry suggests a delamination of Adriatic lithosphere. Here, we link the evolution of this continental convergence system to hitherto unreported sets of extensively uplifted Oligocene–Miocene (28–17 Ma) marine terraces preserved at elevations of up to 600 m along the Dinaric coastal range. River incision on either side of the Mediterranean-Black Sea drainage divide is comparable to the amounts of terrace uplift. The preservation of the uplifted terraces implies that the most External Dinarides did not experience substantial deformation other than surface uplift in the Neogene. These observations and the contemporaneous emplacement of igneous rocks (33–22 Ma) in the internal Dinarides suggest that the Oligo-Miocene orogen-wide uplift was driven by post-break-off delamination of the Adriatic lithospheric mantle, this was followed by isostatic readjustment of the remaining crust. Our study details how lithospheric delamination exerts an important control on crustal deformation and that its crustal signature and geomorphic imprint can be preserved for millions of years.
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Lovrenčić L, Bonassin L, Boštjančić LL, Podnar M, Jelić M, Klobučar G, Jaklič M, Slavevska-Stamenković V, Hinić J, Maguire I. New insights into the genetic diversity of the stone crayfish: taxonomic and conservation implications. BMC Evol Biol 2020; 20:146. [PMID: 33158414 PMCID: PMC7648294 DOI: 10.1186/s12862-020-01709-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 10/21/2020] [Indexed: 12/23/2022] Open
Abstract
Background Austropotamobius torrentium is a freshwater crayfish species native to central and south-eastern Europe, with an intricate evolutionary history and the highest genetic diversity recorded in the northern-central Dinarides (NCD). Its populations are facing declines, both in number and size across its entire range. By extanding current knowledge on the genetic diversity of this species, we aim to assist conservation programmes. Multigene phylogenetic analyses were performed using different divergence time estimates based on mitochondrial and, for the first time, nuclear DNA markers on the largest data set analysed so far. In order to reassess taxonomic relationships within this species we applied several species delimitation methods and studied the meristic characters with the intention of finding features that would clearly separate stone crayfish belonging to different phylogroups. Results Our results confirmed the existence of high genetic diversity within A. torrentium, maintained in divergent phylogroups which have their own evolutionary dynamics. A new phylogroup in the Kordun region belonging to NCD has also been discovered. Due to the incongruence between implemented species delimitation approaches and the lack of any morphological characters conserved within lineages, we are of the opinion that phylogroups recovered on mitochondrial and nuclear DNA are cryptic subspecies and distinct evolutionary significant units. Conclusions Geographically and genetically isolated phylogroups represent the evolutionary legacy of A. torrentium and are highly relevant for conservation due to their evolutionary distinctiveness and restricted distribution.
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Affiliation(s)
- Leona Lovrenčić
- Division of Zoology, Department of Biology, Faculty of Science, University of Zagreb, Rooseveltov trg 6, 10000, Zagreb, Croatia
| | - Lena Bonassin
- Division of Zoology, Department of Biology, Faculty of Science, University of Zagreb, Rooseveltov trg 6, 10000, Zagreb, Croatia
| | - Ljudevit Luka Boštjančić
- Division of Zoology, Department of Biology, Faculty of Science, University of Zagreb, Rooseveltov trg 6, 10000, Zagreb, Croatia
| | - Martina Podnar
- Croatian Natural History Museum, Demetrova 1, 10000, Zagreb, Croatia
| | - Mišel Jelić
- Department of Natural Sciences, Varaždin City Museum, Franjevački trg 10, 42000, Varaždin, Croatia
| | - Göran Klobučar
- Division of Zoology, Department of Biology, Faculty of Science, University of Zagreb, Rooseveltov trg 6, 10000, Zagreb, Croatia
| | - Martina Jaklič
- Center for Clinical Research, University Medical Centre Ljubljana, Zaloška 2, 1000, Ljubljana, Slovenia
| | - Valentina Slavevska-Stamenković
- Department of Invertebrates and Animal Ecology, Faculty of Natural Sciences and Mathematics, University "St. Cyril and Methodius", Arhimedova 3, 1000, Skopje, Republic of North Macedonia
| | - Jelena Hinić
- Department of Invertebrates and Animal Ecology, Faculty of Natural Sciences and Mathematics, University "St. Cyril and Methodius", Arhimedova 3, 1000, Skopje, Republic of North Macedonia
| | - Ivana Maguire
- Division of Zoology, Department of Biology, Faculty of Science, University of Zagreb, Rooseveltov trg 6, 10000, Zagreb, Croatia.
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Smectitization as a Trigger of Bacterially Mediated Mn-Fe Micronodule Generation in Felsic Glass (Livno-Tomislavgrad Paleolake, Bosnia and Herzegovina). MINERALS 2020. [DOI: 10.3390/min10100899] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Miocene tuffs preserved in argillaceous sediment interbedded with lacustrine successions are commonly encountered throughout the Dinarides Lake System (DLS) in south-eastern Europe. In this contribution the volcanic glass degradation and co-genetic Mn-Fe precipitation were studied in a 14.68 Ma felsic tuff from DLS Livno-Tomislavgrad Basin. Microbial activity has been involved in both reactions thus adding the interest of revealing effects of biotic and abiotic processes taking place during tuff eogenesis. X-ray diffraction and electron microbeam analysis with energy-dispersive X-ray spectroscopy revealed the pitting or granular structures developed at glass rims along with smectite flakes protruding from a degrading glass. Mn-Fe mineralization emerges in the form of Mn-Fe coatings, an initial step to micronodule formation, where traces of biogenetic influence included a high content of phases rich in structural Mn (IV) (i.e., ranciéite and jacobsite) and presence of microbial microfossils. Co-genetic ties between glass degradation and Mn-Fe precipitation were established through the report of dioctahedral smectite formed out of altered glass; which then served as nuclei of the ongoing biotic and abiotic Mn-Fe mineralization. These processes manifest on a continuous involvement of microbial life in the course of eogenesis of pyroclastic material in lacustrine environments.
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Xafis A, Saarinen J, Bastl K, Nagel D, Grímsson F. Palaeodietary traits of large mammals from the middle Miocene of Gračanica (Bugojno Basin, Bosnia-Herzegovina). PALAEOBIODIVERSITY AND PALAEOENVIRONMENTS 2020; 100:457-477. [PMID: 32647552 PMCID: PMC7320953 DOI: 10.1007/s12549-020-00435-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Revised: 05/04/2020] [Accepted: 05/09/2020] [Indexed: 06/11/2023]
Abstract
Recent excavations at the Gračanica coal mine (Bugojno Basin, Bosnia-Herzegovina) have unearthed numerous skeletal parts of fossil vertebrates, including a noteworthy collection of mammalian remains. Previous palaeoecological investigations of the Dinarides Lake System were established using stratigraphical, palaeofloral, and malacological data. However, large mammal remains have so far not been used to reconstruct the terrestrial palaeoenvironment of this important fossil ecosystem. Here, the palaeodietary preferences of large mammals were investigated, using a multiproxy approach by employing dental microwear and dental mesowear analysis, in order to provide new perspectives on the terrestrial palaeoecology of the Dinarides Lake System. The dental microwear of all available adult mammalian teeth was analysed. Dental mesowear analysis was employed for ungulate and proboscidean taxa, using mesowear scores and mesowear angles, respectively. The analysis reveals the presence of browsing, "dirty browsing", and mixed-feeding herbivorous taxa, with seasonal fruit, or even grass intake. Additionally, the analysis of the carnivores suggests the presence of hyaena- and cheetah-like hypercarnivores, as well as generalists. The palaeodietary traits of the fossil mammals suggest a closed canopy-like environment, which is supported by the fossil plant assemblage. Palaeopalynological data confirm the omnipresence of fleshy fruit-bearing plants, herbaceous taxa, as well as grasses, which justifies the seasonal fruit browsing, the common "dirty browsing", and the occasional grazing behaviour visualized for some of the fossil mammals from Gračanica.
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Affiliation(s)
- Alexandros Xafis
- Department of Palaeontology, Faculty of Earth Sciences, University of Vienna, 1090 Vienna, Austria
| | - Juha Saarinen
- Department of Geosciences and Geography, University of Helsinki, Helsinki, Finland
| | - Katharina Bastl
- Department of Palaeontology, Faculty of Earth Sciences, University of Vienna, 1090 Vienna, Austria
- Department of Oto-Rhino-Laryngology, Research Group Aerobiology and Pollen Information, Medical University of Vienna, Vienna, Austria
| | - Doris Nagel
- Department of Palaeontology, Faculty of Earth Sciences, University of Vienna, 1090 Vienna, Austria
| | - Friðgeir Grímsson
- Department of Botany and Biodiversity Research, University of Vienna, 1030 Vienna, Austria
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Tectonics, climate, and the rise and demise of continental aquatic species richness hotspots. Proc Natl Acad Sci U S A 2015; 112:11478-83. [PMID: 26305934 DOI: 10.1073/pnas.1503992112] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Continental aquatic species richness hotspots are unevenly distributed across the planet. In present-day Europe, only two centers of biodiversity exist (Lake Ohrid on the Balkans and the Caspian Sea). During the Neogene, a wide variety of hotspots developed in a series of long-lived lakes. The mechanisms underlying the presence of richness hotspots in different geological periods have not been properly examined thus far. Based on Miocene to Recent gastropod distributions, we show that the existence and evolution of such hotspots in inland-water systems are tightly linked to the geodynamic history of the European continent. Both past and present hotspots are related to the formation and persistence of long-lived lake systems in geological basins or to isolation of existing inland basins and embayments from the marine realm. The faunal evolution within hotspots highly depends on warm climates and surface area. During the Quaternary icehouse climate and extensive glaciations, limnic biodiversity sustained a severe decline across the continent and most former hotspots disappeared. The Recent gastropod distribution is mainly a geologically young pattern formed after the Last Glacial Maximum (19 ky) and subsequent formation of postglacial lakes. The major hotspots today are related to long-lived lakes in preglacially formed, permanently subsiding geological basins.
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