1
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Narayanan D, Tran KT, Pallesen JS, Solbak SMØ, Qin Y, Mukminova E, Luchini M, Vasilyeva KO, González Chichón D, Goutsiou G, Poulsen C, Haapanen N, Popowicz GM, Sattler M, Olagnier D, Gajhede M, Bach A. Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery. J Med Chem 2022; 65:14481-14526. [PMID: 36263945 DOI: 10.1021/acs.jmedchem.2c00830] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Targeting the protein-protein interaction (PPI) between the transcription factor nuclear factor erythroid 2-related factor 2 (Nrf2) and its repressor, Kelch-like ECH-associated protein 1 (Keap1), constitutes a promising strategy for treating diseases involving oxidative stress and inflammation. Here, a fragment-based drug discovery (FBDD) campaign resulted in novel, high-affinity (Ki = 280 nM), and cell-active noncovalent small-molecule Keap1-Nrf2 PPI inhibitors. We screened 2500 fragments using orthogonal assays─fluorescence polarization (FP), thermal shift assay (TSA), and surface plasmon resonance (SPR)─and validated the hits by saturation transfer difference (STD) NMR, leading to 28 high-priority hits. Thirteen co-structures showed fragments binding mainly in the P4 and P5 subpockets of Keap1's Kelch domain, and three fluorenone-based fragments featuring a novel binding mode were optimized by structure-based drug discovery. We thereby disclose several fragment hits, including their binding modes, and show how FBDD can be performed to find new small-molecule Keap1-Nrf2 PPI inhibitors.
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Affiliation(s)
- Dilip Narayanan
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Kim T Tran
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Jakob S Pallesen
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Sara M Ø Solbak
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Yuting Qin
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Elina Mukminova
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Martina Luchini
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Kristina O Vasilyeva
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Dorleta González Chichón
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Georgia Goutsiou
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Cecilie Poulsen
- Department of Biomedicine, Faculty of Health, Aarhus University, 8000 Aarhus C, Denmark
| | - Nanna Haapanen
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Grzegorz M Popowicz
- Institute of Structural Biology, Helmholtz Zentrum München, 85764 Neuherberg, Germany.,Bavarian NMR Center, Department of Chemistry, Technical University of Munich, 85747 Garching, Germany
| | - Michael Sattler
- Institute of Structural Biology, Helmholtz Zentrum München, 85764 Neuherberg, Germany.,Bavarian NMR Center, Department of Chemistry, Technical University of Munich, 85747 Garching, Germany
| | - David Olagnier
- Department of Biomedicine, Faculty of Health, Aarhus University, 8000 Aarhus C, Denmark
| | - Michael Gajhede
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
| | - Anders Bach
- Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Universitetsparken 2, 2100 Copenhagen, Denmark
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2
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Basetty S, Kumaraguru T. Preparation of enantiopure pregabalin intermediate using cross linked enzyme aggregates (CLEAs) in basket reactor. BIOCATAL BIOTRANSFOR 2022. [DOI: 10.1080/10242422.2021.2023507] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Shalini Basetty
- Department of Organic Synthesis and Process Chemistry, CSIR-Indian Institute of Chemical Technology, Hyderabad, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India
| | - Thenkrishnan Kumaraguru
- Department of Organic Synthesis and Process Chemistry, CSIR-Indian Institute of Chemical Technology, Hyderabad, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India
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3
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Ortega‐Rojas MA, Castillo E, Razo‐Hernández RS, Pastor N, Juaristi E, Escalante J. Effect of the Substituent and Amino Group Position on the Lipase‐Catalyzed Resolution of γ‐Amino Esters: A Molecular Docking Study Shedding Light on
Candida antarctica
lipase B Enantioselectivity. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100712] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Marina A. Ortega‐Rojas
- Instituto de Investigación en Ciencias Básicas y Aplicadas Centro de Investigaciones Químicas Universidad Autónoma del Estado de Morelos Av. Universidad No. 1001, Col. Chamilpa C.P. 62210 Cuernavaca Morelos México
| | - Edmundo Castillo
- Departamento de Ingeniería Celular y Biocatálisis Instituto de Biotecnología UNAM Apartado Postal 510–3 C.P. 62271 Cuernavaca Morelos México
| | - Rodrigo Said Razo‐Hernández
- Instituto de Investigación en Ciencias Básicas y Aplicadas Centro de Investigación en Dinámica Celular Universidad Autónoma del Estado de Morelos Av. Universidad No. 1001, Col. Chamilpa C.P. 62210 Cuernavaca Morelos México
| | - Nina Pastor
- Instituto de Investigación en Ciencias Básicas y Aplicadas Centro de Investigación en Dinámica Celular Universidad Autónoma del Estado de Morelos Av. Universidad No. 1001, Col. Chamilpa C.P. 62210 Cuernavaca Morelos México
| | - Eusebio Juaristi
- Departamento de Química Centro de Investigación y de Estudios Avanzados Av. Instituto Politécnico Nacional No. 2508 07360 Ciudad de México México
- El Colegio Nacional Luis González Obregón 23, Centro Histórico 06020 Ciudad de México México
| | - Jaime Escalante
- Instituto de Investigación en Ciencias Básicas y Aplicadas Centro de Investigaciones Químicas Universidad Autónoma del Estado de Morelos Av. Universidad No. 1001, Col. Chamilpa C.P. 62210 Cuernavaca Morelos México
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4
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D’Oca CDRM, Mass EB, Ongaratto RF, de Andrade AM, D’Oca MGM, Russowsky D. Synthesis of (+/−)-Pregabalin and its novel lipophilic β-alkyl-substituted analogues from fatty chains. NEW J CHEM 2020. [DOI: 10.1039/d0nj02263b] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this work, were synthesized for the first time a series of new lipophilic β-alkyl substituted GABA derivatives from fatty alkyl chains.
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Affiliation(s)
| | - Eduardo Bustos Mass
- Instituto de Química
- Universidade Federal do Rio Grande do Sul
- Porto Alegre
- Brazil
| | | | | | | | - Dennis Russowsky
- Instituto de Química
- Universidade Federal do Rio Grande do Sul
- Porto Alegre
- Brazil
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5
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Scalable Preparation of Enantioenriched ( S)-5-methylhept-2-en-4-one. Synthesis and Aroma Properties of Achiral Analogues Thereof. Molecules 2019; 24:molecules24244497. [PMID: 31818002 PMCID: PMC6943495 DOI: 10.3390/molecules24244497] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Revised: 11/19/2019] [Accepted: 12/04/2019] [Indexed: 11/30/2022] Open
Abstract
(S)-5-Methylhept-2-en-4-one is a key flavour compound in hazelnuts. We have performed its chiral-pool-based chemoenzymatic synthesis with 39% overall yield (73% ee). The four-step aldol-based sequence avoids the use of highly reactive and/or toxic reagents, does not require anhydrous conditions and uses only distillation as the purification method. Thus, such methodology represents a green and scalable alternative to only two stereoselective approaches towards this natural product known so far. In addition, we have designed and prepared a set of new (di)enones as achiral synthetic analogues of the title compound. The results of their sensory analyses clearly show that relatively minor structural changes of the natural molecule significantly alter its olfactory properties. Thus, simple (poly)methylation completely changes the original hazelnut aroma of (S)-5-methylhept-2-en-4-one and shifts the odour of its analogues to eucalyptus, menthol, camphor, and sweet aroma.
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6
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Jiang B, Zhao M, Li SS, Xu YH, Loh TP. Macrolide Synthesis through Intramolecular Oxidative Cross-Coupling of Alkenes. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201710601] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Bing Jiang
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
| | - Meng Zhao
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
| | - Shu-Sen Li
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
| | - Yun-He Xu
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
| | - Teck-Peng Loh
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
- Institute of Advanced Synthesis; Jiangsu National Synergetic, Innovation Center for Advanced Materials; Nanjing Tech University; Nanjing Jiangsu 210009 China
- Division of Chemistry and Biological Chemistry; School of Physical and Mathematical Sciences; Nanyang Technological University; Singapore 637616 Singapore
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7
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Jiang B, Zhao M, Li SS, Xu YH, Loh TP. Macrolide Synthesis through Intramolecular Oxidative Cross-Coupling of Alkenes. Angew Chem Int Ed Engl 2017; 57:555-559. [DOI: 10.1002/anie.201710601] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2017] [Indexed: 12/19/2022]
Affiliation(s)
- Bing Jiang
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
| | - Meng Zhao
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
| | - Shu-Sen Li
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
| | - Yun-He Xu
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
| | - Teck-Peng Loh
- Hefei National Laboratory for Physical Sciences at the Microscale iChEM (Collaborative Innovation Center of Chemistry for Energy Materials); University of Science and Technology of China; Hefei Anhui 230026 China
- Institute of Advanced Synthesis; Jiangsu National Synergetic, Innovation Center for Advanced Materials; Nanjing Tech University; Nanjing Jiangsu 210009 China
- Division of Chemistry and Biological Chemistry; School of Physical and Mathematical Sciences; Nanyang Technological University; Singapore 637616 Singapore
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8
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Cortigiani M, Tampieri A, Monasterolo C, Mereu A, Adamo MF. Preparation and reactivity of sterically encumbered organocatalysts and their use in the preparation of ( S )-Pregabalin precursors. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.09.067] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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9
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Ordóñez M, Cativiela C, Romero-Estudillo I. An update on the stereoselective synthesis of γ-amino acids. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.tetasy.2016.08.011] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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10
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Potassium carbonate as a base for generation of carbanions from CH-acids in organic synthesis. Russ Chem Bull 2016. [DOI: 10.1007/s11172-016-1260-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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11
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Stereoselective reactions of nitro compounds in the synthesis of natural compound analogs and active pharmaceutical ingredients. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.07.067] [Citation(s) in RCA: 95] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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12
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Tsai SW. Enantiopreference of Candida antarctica lipase B toward carboxylic acids: Substrate models and enantioselectivity thereof. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.molcatb.2014.07.010] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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13
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Recent Advances in Lipase-Mediated Preparation of Pharmaceuticals and Their Intermediates. Int J Mol Sci 2015; 16:29682-716. [PMID: 26690428 PMCID: PMC4691134 DOI: 10.3390/ijms161226191] [Citation(s) in RCA: 102] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2015] [Revised: 11/04/2015] [Accepted: 11/04/2015] [Indexed: 01/26/2023] Open
Abstract
Biocatalysis offers an alternative approach to conventional chemical processes for the production of single-isomer chiral drugs. Lipases are one of the most used enzymes in the synthesis of enantiomerically pure intermediates. The use of this type of enzyme is mainly due to the characteristics of their regio-, chemo- and enantioselectivity in the resolution process of racemates, without the use of cofactors. Moreover, this class of enzymes has generally excellent stability in the presence of organic solvents, facilitating the solubility of the organic substrate to be modified. Further improvements and new applications have been achieved in the syntheses of biologically active compounds catalyzed by lipases. This review critically reports and discusses examples from recent literature (2007 to mid-2015), concerning the synthesis of enantiomerically pure active pharmaceutical ingredients (APIs) and their intermediates in which the key step involves the action of a lipase.
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14
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Moccia M, Cortigiani M, Monasterolo C, Torri F, Del Fiandra C, Fuller G, Kelly B, Adamo MFA. Development and Scale-up of an Organocatalytic Enantioselective Process to Manufacture (S)-Pregabalin. Org Process Res Dev 2015. [DOI: 10.1021/acs.oprd.5b00160] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Maria Moccia
- Centre
for Synthesis and Chemical Biology (CSCB), Royal College of Surgeons in Ireland (RCSI), 123 St. Stephen’s Green, Dublin 2, Ireland
| | - Mauro Cortigiani
- Centre
for Synthesis and Chemical Biology (CSCB), Royal College of Surgeons in Ireland (RCSI), 123 St. Stephen’s Green, Dublin 2, Ireland
| | - Claudio Monasterolo
- Centre
for Synthesis and Chemical Biology (CSCB), Royal College of Surgeons in Ireland (RCSI), 123 St. Stephen’s Green, Dublin 2, Ireland
| | - Federica Torri
- Centre
for Synthesis and Chemical Biology (CSCB), Royal College of Surgeons in Ireland (RCSI), 123 St. Stephen’s Green, Dublin 2, Ireland
| | - Claudia Del Fiandra
- Centre
for Synthesis and Chemical Biology (CSCB), Royal College of Surgeons in Ireland (RCSI), 123 St. Stephen’s Green, Dublin 2, Ireland
| | - Geoffrey Fuller
- Kelada
Pharmachem.
Ltd., 123 St. Stephen’s Green, Dublin 2, Ireland
| | - Brian Kelly
- Kelada
Pharmachem.
Ltd., 123 St. Stephen’s Green, Dublin 2, Ireland
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15
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Ballini R, Petrini M. The Nitro to Carbonyl Conversion (Nef Reaction): New Perspectives for a Classical Transformation. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500008] [Citation(s) in RCA: 91] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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16
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Xu F, Chen S, Xu G, Wu J, Yang L. Discovery and expression of a Pseudomonas sp. esterase as a novel biocatalyst for the efficient biosynthesis of a chiral intermediate of pregabalin. BIOTECHNOL BIOPROC E 2015. [DOI: 10.1007/s12257-015-0069-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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17
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Moccia M, Wells RJ, Adamo MFA. An improved procedure to prepare 3-methyl-4-nitroalkylenethylisoxazoles and their reaction under catalytic enantioselective Michael addition with nitromethane. Org Biomol Chem 2015; 13:2192-5. [DOI: 10.1039/c4ob02109f] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
A two-step preparation of 3-methyl-4-nitro-5-alkylethenyl isoxazoles is herein reported. These were reacted with nitromethane under phase-transfer catalysis to provide highly enantioenriched adducts (up to 93% ee).
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Affiliation(s)
- Maria Moccia
- Centre for Synthesis and Chemical Biology (CSCB)
- Department of Pharmaceutical and Medicinal Chemistry
- Royal College of Surgeons in Ireland
- Dublin 2
- Ireland
| | - Robert J. Wells
- Centre for Synthesis and Chemical Biology (CSCB)
- Department of Pharmaceutical and Medicinal Chemistry
- Royal College of Surgeons in Ireland
- Dublin 2
- Ireland
| | - Mauro. F. A. Adamo
- Centre for Synthesis and Chemical Biology (CSCB)
- Department of Pharmaceutical and Medicinal Chemistry
- Royal College of Surgeons in Ireland
- Dublin 2
- Ireland
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18
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Gupta P, Mahajan A. Green chemistry approaches as sustainable alternatives to conventional strategies in the pharmaceutical industry. RSC Adv 2015. [DOI: 10.1039/c5ra00358j] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Green chemistry is a rapidly developing field for the sustainable development of future science and technology. Incorporating green chemistry into the synthesis of active pharmaceutical ingredients and intermediates is of ongoing importance to the pharmaceutical industry.
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Affiliation(s)
- Princy Gupta
- Department of Chemistry
- Guru Nanak Dev University
- Amritsar
- India
| | - Aman Mahajan
- Research Scientist
- Research and Development Centre
- Apeejay Stya Research Foundation
- Gurgaon
- India
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19
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Bashiardes G, Bodwell GJ, Collingwood SP, Costello JF, Davies SG, Fletcher AM, Garner A, Preston SC, Thomson JE. Stereoselective syntheses of substituted succinic acid derivatives of the iron chiral auxiliary [(η5-C5H5)Fe(CO)(PPh3)]. Tetrahedron 2014. [DOI: 10.1016/j.tet.2014.09.049] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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20
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Jędrzejczak K, Szczesio M, Oracz M, Jankowski S, Główka ML. Crystal structure of (3R)-3-benzyl-4-[(tert-but-oxy-carbon-yl)amino]-butanoic acid. Acta Crystallogr Sect E Struct Rep Online 2014; 70:o1081-o1082. [PMID: 25484683 PMCID: PMC4257155 DOI: 10.1107/s1600536814019497] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2014] [Accepted: 08/28/2014] [Indexed: 06/04/2023]
Abstract
The characteristic feature of the title mol-ecule, C16H23NO4, is the syn configuration of the partially double amide C-N bond [C-N-C-O torsion angle = -14.8 (2)°]. The crystal packing is determined by inter-molecular O-H⋯O and N-H⋯O hydrogen bonds, which link the mol-ecules into a double-chain structure extending along [010].
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Affiliation(s)
- Karol Jędrzejczak
- Institute of Organic Chemistry, Faculty of Chemistry, Lodz University of Technology, Żeromskiego 116, Łódź, Poland
| | - Małgorzata Szczesio
- Institute of General and Ecological Chemistry, Faculty of Chemistry, Lodz University of Technology, Żeromskiego 116, Łódź, Poland
| | - Monika Oracz
- Institute of General and Ecological Chemistry, Faculty of Chemistry, Lodz University of Technology, Żeromskiego 116, Łódź, Poland
| | - Stefan Jankowski
- Institute of Organic Chemistry, Faculty of Chemistry, Lodz University of Technology, Żeromskiego 116, Łódź, Poland
| | - Marek L. Główka
- Institute of General and Ecological Chemistry, Faculty of Chemistry, Lodz University of Technology, Żeromskiego 116, Łódź, Poland
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21
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Jędrzejczak K, Hrynczyszyn P, Artym J, Kocięba M, Zimecki M, Zabrocki J, Jankowski S. Synthesis and biological activity of cyclolinopeptide A analogues modified with γ(3)-bis(homophenylalanine). Eur J Med Chem 2014; 86:515-27. [PMID: 25203781 DOI: 10.1016/j.ejmech.2014.09.014] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2014] [Revised: 09/01/2014] [Accepted: 09/04/2014] [Indexed: 01/01/2023]
Abstract
Cyclolinopeptide A, naturally occurring immunomodulatory nonapeptide, was modified with S or R-γ(3)-bis(homophenylalanine) in positions 3 or 4, or both 3 and 4. The replacement of one or both Phe residues by γ(3)-hhPhe led to decrease of their conformational flexibility in the analogues in comparison to CLA. All cyclic peptides, except 11, exist as isomers with the cis Pro-Pro peptide bond. Cyclic peptide 11 with single modification S-γ(3)-hhPhe(4) exists as a mixture of two isomers and the major isomer (89%) contains all peptide bonds of the trans geometry. The peptides were subjected to several immunological tests in vitro and in vivo. Linear peptides 1-8, precursors of CLA analogues 9-16, were not toxic against human peripheral blood mononuclear cells (PBMC) but cyclic analogues showed dose-dependent toxicity with exception of peptide 11. Linear peptides did not inhibit mitogen-induced PBMC proliferation whereas cyclic ones inhibited the proliferation in a dose-dependent manner. The actions of linear and cyclic peptides with regard to lipopolysaccharide (LPS) -induced tumour necrosis factor alpha (TNF α) production in whole human blood cultures were differential but particularly suppressive in the case of linear compound 6. Therefore, for in vivo tests compounds 6 and 11 were selected. The compounds showed comparable, suppressive actions in induction and effector phases of delayed type hypersensitivity as well as in the carrageenan-induced foot pad edema in mouse models. In summary, linear peptide 6 and cyclic peptide 11 are attractive as potential immune suppressor drugs.
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Affiliation(s)
- Karol Jędrzejczak
- Institute of Organic Chemistry, Faculty of Chemistry, Technical University of Łódź, Żeromskiego 116, 90-924, Poland
| | - Paweł Hrynczyszyn
- Institute of Organic Chemistry, Faculty of Chemistry, Technical University of Łódź, Żeromskiego 116, 90-924, Poland
| | - Jolanta Artym
- Institute of Immunology and Experimental Therapy, Polish Academy of Science, R. Weigla 12, 53-114 Wroclaw, Poland
| | - Maja Kocięba
- Institute of Immunology and Experimental Therapy, Polish Academy of Science, R. Weigla 12, 53-114 Wroclaw, Poland
| | - Michał Zimecki
- Institute of Immunology and Experimental Therapy, Polish Academy of Science, R. Weigla 12, 53-114 Wroclaw, Poland
| | - Janusz Zabrocki
- Institute of Organic Chemistry, Faculty of Chemistry, Technical University of Łódź, Żeromskiego 116, 90-924, Poland; Peptaderm Ltd., Rydygiera 8, 01-793 Warsaw, Poland
| | - Stefan Jankowski
- Institute of Organic Chemistry, Faculty of Chemistry, Technical University of Łódź, Żeromskiego 116, 90-924, Poland.
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22
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Fukasawa H, Muratake H, Ito A, Suzuki H, Amano Y, Nagae M, Sugiyama K, Shudo K. Silicon-containing GABA derivatives, silagaba compounds, as orally effective agents for treating neuropathic pain without central-nervous-system-related side effects. ACS Chem Neurosci 2014; 5:525-32. [PMID: 24738473 PMCID: PMC4102965 DOI: 10.1021/cn500053d] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
Neuropathic pain is a chronic condition resulting from neuronal damage. Pregabalin, the (S)-isomer of 3-isobutyl-γ-aminobutyric acid (GABA), is widely used to treat neuropathic pain, despite the occurrence of central nervous system (CNS)-related side effects such as dizziness and somnolence. Here we describe the pharmacology of novel GABA derivatives containing silicon-carbon bonds, silagaba compounds. Silagaba131, 132, and 161 showed pregabalin-like analgesic activities in animal models of neuropathic pain, but in contrast to pregabalin they did not impair neuromuscular coordination in rotarod tests. Pharmacokinetic studies showed that brain exposure to silagaba compounds was lower than that to pregabalin. Surprisingly, despite their potent analgesic action in vivo, silagaba compounds showed only weak binding to α2-δ protein. These compounds may be useful to study mechanisms of neuropathic pain. Our results also indicate that silagaba132 and 161 are candidates for orally effective treatment of neuropathic pain without CNS-related side effects.
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Affiliation(s)
- Hiroshi Fukasawa
- Research Foundation
ITSUU Laboratory, 2-28-10 Tamagawa, Setagaya-ku, Tokyo 158-0094, Japan
| | - Hideaki Muratake
- Research Foundation
ITSUU Laboratory, 2-28-10 Tamagawa, Setagaya-ku, Tokyo 158-0094, Japan
| | - Ai Ito
- Research Foundation
ITSUU Laboratory, 2-28-10 Tamagawa, Setagaya-ku, Tokyo 158-0094, Japan
| | - Hideyuki Suzuki
- Research Foundation
ITSUU Laboratory, 2-28-10 Tamagawa, Setagaya-ku, Tokyo 158-0094, Japan
| | - Yohei Amano
- Research Foundation
ITSUU Laboratory, 2-28-10 Tamagawa, Setagaya-ku, Tokyo 158-0094, Japan
| | - Marina Nagae
- Department
of Clinical Pharmacokinetics, Hoshi University, 2-4-41 Ebara, Shinagawa-ku, Tokyo 142-8501, Japan
| | - Kiyoshi Sugiyama
- Department
of Clinical Pharmacokinetics, Hoshi University, 2-4-41 Ebara, Shinagawa-ku, Tokyo 142-8501, Japan
| | - Koichi Shudo
- Research Foundation
ITSUU Laboratory, 2-28-10 Tamagawa, Setagaya-ku, Tokyo 158-0094, Japan
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Tovar-Gudiño E, Morales-Nava R, Fernández-Zertuche M. Diasteroselective conjugate addition of diethylaluminum cyanide to a conjugated N-enoyl system: an alternative synthesis of (S)-pregabalin. CAN J CHEM 2014. [DOI: 10.1139/cjc-2013-0397] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
We have explored in this work the conjugate addition of diethylaluminum cyanide (Nagata’s reagent) to an N-enoyl system bearing the (R)-4-phenyl-2-oxazolidinone chiral auxiliary. Since this method provided a practical synthesis of γ-amino acids, we report the conjugate addition of diethylaluminum cyanide as the key step in the synthesis of (S)-pregabalin 1 in a five-step sequence of reactions from commercially available starting materials.
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Affiliation(s)
- Erika Tovar-Gudiño
- Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Morelos. Av. Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos, México 62209
| | - Rosmarbel Morales-Nava
- Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Morelos. Av. Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos, México 62209
| | - Mario Fernández-Zertuche
- Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Morelos. Av. Universidad 1001, Col. Chamilpa, Cuernavaca, Morelos, México 62209
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24
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A New Enantioselective Synthesis of the Anticonvulsant Drug Pregabalin (Lyrica) Based on a Hydrolytic Kinetic Resolution Method. Chirality 2013; 25:965-9. [DOI: 10.1002/chir.22253] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2013] [Revised: 08/26/2013] [Accepted: 08/26/2013] [Indexed: 11/07/2022]
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25
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Tajbakhsh M, Farhang M, Hosseini AA. MgO nanoparticles as an efficient and reusable catalyst for aza-Michael reaction. JOURNAL OF THE IRANIAN CHEMICAL SOCIETY 2013. [DOI: 10.1007/s13738-013-0338-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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26
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Engineering of Thermomyces lanuginosus lipase Lip: creation of novel biocatalyst for efficient biosynthesis of chiral intermediate of Pregabalin. Appl Microbiol Biotechnol 2013; 98:2473-83. [DOI: 10.1007/s00253-013-5136-y] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2013] [Revised: 07/16/2013] [Accepted: 07/17/2013] [Indexed: 10/26/2022]
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27
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Murai K, Matsushita T, Nakamura A, Hyogo N, Nakajima J, Fujioka H. Kinetic Resolution of β-Substituted Olefinic Carboxylic Acids by Asymmetric Bromolactonization. Org Lett 2013; 15:2526-9. [DOI: 10.1021/ol401007u] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Kenichi Murai
- Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Tomoyo Matsushita
- Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Akira Nakamura
- Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Norimichi Hyogo
- Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Junki Nakajima
- Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Hiromichi Fujioka
- Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamada-oka, Suita, Osaka 565-0871, Japan
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28
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Simon G, Eljezi T, Legeret B, Charmantray F, Castillo JA, Guérard-Hélaine C, Lemaire M, Bouzon M, Marlière P, Hélaine V, Hecquet L. Synthesis of Specially Designed Probes to Broaden Transketolase Scope. ChemCatChem 2013. [DOI: 10.1002/cctc.201200479] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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29
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(R)- and (S)-4-Amino-3-(trimethylsilyl)methylbutanoic acids ameliorate neuropathic pain without central nervous system-related side effects. Bioorg Med Chem Lett 2012; 22:7602-4. [DOI: 10.1016/j.bmcl.2012.10.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2012] [Revised: 09/26/2012] [Accepted: 10/01/2012] [Indexed: 11/22/2022]
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30
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Enzymatic production of (S)-3-cyano-5-methylhexanoic acid ethyl ester with high substrate loading by immobilized Pseudomonas cepacia lipase. ACTA ACUST UNITED AC 2012. [DOI: 10.1016/j.tetasy.2012.10.011] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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31
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Shen Z, Wu W, Wang W, Chen L. Synthesis of deuterium-labeled pregabalin. J Labelled Comp Radiopharm 2011. [DOI: 10.1002/jlcr.1936] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Zucheng Shen
- School of Pharmaceutical Sciences; Nanjing University of Technology; 5 Xinmofan Road; Nanjing; Jiangsu; 210009; China
| | - Wenchao Wu
- School of Biotechnology and Pharmaceutical Engineering; Nanjing University of Technology; 5 Xinmofan Road; Nanjing; Jiangsu; 210009; China
| | - Wei Wang
- School of Pharmaceutical Sciences; Nanjing University of Technology; 5 Xinmofan Road; Nanjing; Jiangsu; 210009; China
| | - Liqin Chen
- Hi-Tech Research Institute and State Key Laboratory of Materials-Oriented Chemical Engineering; Nanjing University of Technology; 5 Xinmofan Road; Nanjing; Jiangsu; 210009; China
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32
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A green way to γ-lactams through a copper catalyzed ARGET-ATRC in ethanol and in the presence of ascorbic acid. Tetrahedron 2011. [DOI: 10.1016/j.tet.2010.11.025] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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33
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Felluga F, Ghelfi F, Pitacco G, Roncaglia F, Valentin E, Venneri CD. Esterase-mediated synthesis of optically active GABA analogues containing a stereogenic all-carbon quaternary carbon atom. ACTA ACUST UNITED AC 2010. [DOI: 10.1016/j.tetasy.2010.07.010] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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34
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Chavan AB, Maikap GC, Gurjar MK. An Efficient Process of Racemization of 3-(Carbamoylmethyl)-5-methylhexanoic acid: A Pregabalin Intermediate. Org Process Res Dev 2009. [DOI: 10.1021/op900064x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Anil B. Chavan
- Emcure Pharmaceuticals Ltd, R & D Centre, Plot No.12/2, F-II Block, M.I.D.C., Pimpri, Pune - 411018, India
| | - Golak C. Maikap
- Emcure Pharmaceuticals Ltd, R & D Centre, Plot No.12/2, F-II Block, M.I.D.C., Pimpri, Pune - 411018, India
| | - Mukund K. Gurjar
- Emcure Pharmaceuticals Ltd, R & D Centre, Plot No.12/2, F-II Block, M.I.D.C., Pimpri, Pune - 411018, India
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35
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WU T, GAO M, YE B, SHEN Y. An Efficient Method for Racemization of ( S)-3-Carbamoylmethyl-5-methylhexanoic Acid. CHINESE J CHEM 2009. [DOI: 10.1002/cjoc.200990167] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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36
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Tao J, Xu JH. Biocatalysis in development of green pharmaceutical processes. Curr Opin Chem Biol 2009; 13:43-50. [DOI: 10.1016/j.cbpa.2009.01.018] [Citation(s) in RCA: 151] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2008] [Revised: 01/16/2009] [Accepted: 01/26/2009] [Indexed: 10/21/2022]
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