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Shit P, Misra AK. Synthesis of the pentasaccharide repeating unit corresponding to the capsular polysaccharide of Escherichia coli O20:K83:H26. Tetrahedron 2022. [DOI: 10.1016/j.tet.2022.132948] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
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2
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Yan S, Wu L, Li S, Guo W. Triflic Acid Adsorbed on Silica Gel as an Efficient Catalyst for O-Isopropylidenation of Sugar Derivatives. HETEROCYCLES 2022. [DOI: 10.3987/com-22-14621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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3
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Gucchait A, Shit P, Misra AK. Concise synthesis of a tetrasaccharide related to the repeating unit of the cell wall O-antigen of Salmonella enterica O60. Tetrahedron 2020. [DOI: 10.1016/j.tet.2020.131412] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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4
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Gucchait A, Shit P, Misra AK. Synthesis of the tetrasaccharide repeating unit of the O-specific polysaccharide of Azospirillum doebereinerae type strain GSF71 T using linear and one-pot iterative glycosylations. Beilstein J Org Chem 2020; 16:1700-1705. [PMID: 32733613 PMCID: PMC7372237 DOI: 10.3762/bjoc.16.141] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Accepted: 07/09/2020] [Indexed: 12/22/2022] Open
Abstract
A straightforward synthetic strategy was developed for the synthesis of the tetrasaccharide repeating unit corresponding to the O-specific polysaccharide of Azospirillum doebereinerae type strain GSF71T in a very good yield adopting sequential glycosylation followed by removal of the p-methoxybenzyl (PMB) group in the same pot. Further, the synthetic strategy was modified by carrying out three stereoselective iterative glycosylations followed by in situ removal of the PMB group in one pot. The stereochemical outcome of the newly formed glycosidic linkages was excellent using thioglycoside derivatives as glycosyl donors and a combination of N-iodosuccinimide (NIS) and perchloric acid supported on silica (HClO4-SiO2) as the glycosyl activator.
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Affiliation(s)
- Arin Gucchait
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII M, Kolkata 700054, India
| | - Pradip Shit
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII M, Kolkata 700054, India
| | - Anup Kumar Misra
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII M, Kolkata 700054, India
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Kundu M, Gucchait A, Misra AK. Convergent synthesis of a pentasaccharide corresponding to the cell wall O-polysaccharide of enteropathogenic Escherichia coli O115. Tetrahedron 2020. [DOI: 10.1016/j.tet.2020.130952] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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6
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Manna T, Gucchait A, Misra AK. Convenient synthesis of the pentasaccharide repeating unit corresponding to the cell wall O-antigen of Escherichia albertii O4. Beilstein J Org Chem 2020; 16:106-110. [PMID: 32082429 PMCID: PMC7006483 DOI: 10.3762/bjoc.16.12] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2019] [Accepted: 01/15/2020] [Indexed: 12/26/2022] Open
Abstract
A straightforward sequential synthetic strategy has been developed for the synthesis of a pentasaccharide repeating unit corresponding to the cell wall O-antigen of the Escherichia albertii O4 strain in very good yield with the desired configuration at the glycosidic linkages using thioglycosides and trichloroacetimidate derivatives as glycosyl donors and perchloric acid supported over silica (HClO4/SiO2) as a solid supported protic acid glycosyl activator. The expected configuration at the glycosidic linkages was achieved using a reasonable selection of protecting groups in the manosaccharide intermediates.
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Affiliation(s)
- Tapasi Manna
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII M, Kolkata 700054, India
| | - Arin Gucchait
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII M, Kolkata 700054, India
| | - Anup Kumar Misra
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII M, Kolkata 700054, India
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Straightforward sequential and one-pot synthesis of a pentasaccharide repeating unit corresponding to the cell wall O-antigen of Shigella boydii type 18. Tetrahedron 2019. [DOI: 10.1016/j.tet.2019.130697] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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8
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Shit P, Misra AK. Synthesis of a hexasaccharide repeating unit of the cell wall polysaccharide of Bifidobacterium animalis subsp. lactis LKM512. Carbohydr Res 2019; 473:12-17. [PMID: 30599388 DOI: 10.1016/j.carres.2018.12.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2018] [Revised: 12/18/2018] [Accepted: 12/23/2018] [Indexed: 10/27/2022]
Abstract
A convergent synthesis of the hexasaccharide as its 2-aminoethyl glycoside corresponding to the repeating unit of the cell wall polysaccharide of Bifidobacterium animalis subsp. lactis LKM512 has been achieved applying a [4 + 2] glycosylation strategy. The disaccharide thioglycoside donor was prepared by combining a d-galactofuranosyl thioglycoside with another l-rhamnosyl thioglycoside acceptor. The yields of the individual glycosylation steps were highly satisfactory with excellent stereo outcome. An α-glycosidic linkage of the d-galactofuranosyl moiety in the hexasaccharide was achieved in very good yield.
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Affiliation(s)
- Pradip Shit
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII-M, Kolkata, 700054, India
| | - Anup Kumar Misra
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII-M, Kolkata, 700054, India.
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Kita Y, Kajimoto T, Morimoto K, Yanase K, Odaka I. Enviromentally-Benign Glycosylation Reaction Using Odorless Thio-Glycosides and Hypervalent Iodine(III) Reagent. HETEROCYCLES 2019. [DOI: 10.3987/com-18-s(f)35] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Affiliation(s)
- Michael Martin Nielsen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 Copenhagen, Denmark
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11
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Bhaumik I, Misra AK. Concise Synthesis of a Pentasaccharide Repeating Unit Corresponding to the O-Antigen of Salmonella EntericaO51. ChemistrySelect 2017. [DOI: 10.1002/slct.201601918] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Ishani Bhaumik
- Division of Molecular Medicine; Bose Institute, P-1/12, C.I.T. Scheme VII M; Kolkata 700054 India
| | - Anup Kumar Misra
- Division of Molecular Medicine; Bose Institute, P-1/12, C.I.T. Scheme VII M; Kolkata 700054 India
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Abstract
The development of glycobiology relies on the sources of particular oligosaccharides in their purest forms. As the isolation of the oligosaccharide structures from natural sources is not a reliable option for providing samples with homogeneity, chemical means become pertinent. The growing demand for diverse oligosaccharide structures has prompted the advancement of chemical strategies to stitch sugar molecules with precise stereo- and regioselectivity through the formation of glycosidic bonds. This Review will focus on the key developments towards chemical O-glycosylations in the current century. Synthesis of novel glycosyl donors and acceptors and their unique activation for successful glycosylation are discussed. This Review concludes with a summary of recent developments and comments on future prospects.
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Affiliation(s)
- Rituparna Das
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
| | - Balaram Mukhopadhyay
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
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Dhara D, Misra AK. Convergent Synthesis of Oligosaccharide Fragments Corresponding to the Cell Wall O-Polysaccharide of Salmonella enterica O53. ChemistryOpen 2015; 4:768-73. [PMID: 27308202 PMCID: PMC4906498 DOI: 10.1002/open.201500102] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2015] [Indexed: 11/23/2022] Open
Abstract
Conventional glycoconjugate vaccines are prepared with polysaccharides isolated from bacterial fermentation, an approach with some significant drawbacks such as handling of live bacterial strains, the presence of biological impurities, and inter-batch variations in oligosaccharide epitope structure. However, it has been shown in many cases that a synthetic fragment of appropriate structure conjugated to a protein can be an effective vaccine that circumvents the shortcomings of using full-length oligosaccharides. The development of synthetic strategies to prepare glycoconjugate derivatives against pathogenic bacterial strains is therefore of great interest. Oligosaccharide fragments corresponding to the repeat unit of the cell wall O-antigen of Salmonella enterica strain O53 were synthesized in good yield. Sequential and block glycosylation strategies were used for the synthesis of the target compounds. A number of recently developed reaction conditions were used in the synthetic strategy. A one-pot reaction scheme was also developed for the multiple glycosylation steps. The stereoselective outcomes of all glycosylation reactions were very good.
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Affiliation(s)
- Debashis Dhara
- Bose InstituteDivision of Molecular MedicineP-1/12C.I.T. Scheme VII MKolkata700054India
| | - Anup Kumar Misra
- Bose InstituteDivision of Molecular MedicineP-1/12C.I.T. Scheme VII MKolkata700054India
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Synthesis of trisaccharide and a tetrasaccharide repeating unit corresponding to the O-antigen of Shiga toxin producing Escherichia coli O177. Tetrahedron 2015. [DOI: 10.1016/j.tet.2015.04.042] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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15
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Kajimoto T, Morimoto K, Ogawa R, Dohi T, Kita Y. Phenyliodine Bis(trifluoroacetate) (PIFA) as an Excellent Promoter of 2-Deoxy-2-phthalimido-1-thioglycosides in the Presence of Triflic Acid in Glycosylation Reactions. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500186] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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16
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Lian G, Zhang X, Yu B. Thioglycosides in Carbohydrate Research. Carbohydr Res 2015; 403:13-22. [DOI: 10.1016/j.carres.2014.06.009] [Citation(s) in RCA: 143] [Impact Index Per Article: 15.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2014] [Revised: 05/29/2014] [Accepted: 06/10/2014] [Indexed: 11/30/2022]
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17
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Yu Y, Chen M. A Protocol for the Synthesis of C8-16Alkyl 2,3-Isopropylidene-α-L-Rhamnosides. J Carbohydr Chem 2014. [DOI: 10.1080/07328303.2014.958159] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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18
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Dara S, Saikam V, Yadav M, Singh PP, Vishwakarma RA. HClO4–silica-catalysed regioselective opening of benzylidene acetals and its application towards regioselective HO-4 glycosylation of benzylidene acetals in one-pot. Carbohydr Res 2014; 391:93-6. [DOI: 10.1016/j.carres.2014.01.011] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2013] [Revised: 01/11/2014] [Accepted: 01/13/2014] [Indexed: 12/01/2022]
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19
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Bhaumik I, Misra AK. Expedient synthesis of a pentasaccharide related to the O-specific polysaccharide of Escherichia coli O117:K98:H4 strain. RSC Adv 2014. [DOI: 10.1039/c4ra10538a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A convenient synthetic strategy has been developed for the synthesis of a pentasaccharide, related to the O-specific polysaccharide ofEscherichia coliO117:K98:H4 strain, using sequential glycosylations of functionalized monosaccharide moieties.
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Affiliation(s)
- Ishani Bhaumik
- Bose Institute
- Division of Molecular Medicine
- Kolkata-700054, India
| | - Anup Kumar Misra
- Bose Institute
- Division of Molecular Medicine
- Kolkata-700054, India
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20
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Vidyasagar A, Pathigoolla A, Sureshan KM. Chemoselective alcoholysis/acetolysis of trans-ketals over cis-ketals and its application in the total synthesis of the cellular second messenger, d-myo-inositol-1,4,5-trisphosphate. Org Biomol Chem 2013; 11:5443-53. [DOI: 10.1039/c3ob40789f] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
- Adiyala Vidyasagar
- School of Chemistry, Indian Institute of Science Education and Research, Thiruvananthapuram 695016, India
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21
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Sau A, Misra AK. Convergent synthesis of the tetrasaccharide repeating unit of the cell wall lipopolysaccharide of Escherichia coli O40. Beilstein J Org Chem 2012; 8:2053-9. [PMID: 23209539 PMCID: PMC3511039 DOI: 10.3762/bjoc.8.230] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2012] [Accepted: 11/01/2012] [Indexed: 11/23/2022] Open
Abstract
A tetrasaccharide repeating unit corresponding to the cell-wall lipopolysaccharide of E. coli O40 was synthesized by using a convergent block glycosylation strategy. A disaccharide donor was coupled to a disaccharide acceptor by a stereoselective glycosylation. A 2-aminoethyl linker was chosen as the anomeric protecting group at the reducing end of the tetrasaccharide. All glycosylation steps are significantly high yielding and stereoselective.
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Affiliation(s)
- Abhijit Sau
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII-M, Kolkata-700054, India; FAX: +91-33-2355 3886
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22
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Ghosh T, Misra AK. Facile synthesis of the pentasaccharide repeating unit of the cell wall O-antigen of Escherichia coli 19ab. Carbohydr Res 2012; 362:8-12. [DOI: 10.1016/j.carres.2012.09.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2012] [Revised: 08/31/2012] [Accepted: 09/01/2012] [Indexed: 11/25/2022]
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23
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Guchhait G, Misra AK. Convergent synthesis of the tetrasaccharide repeating unit corresponding to the O-antigen of the verotoxin-producing Escherichia coli O176. Glycoconj J 2011; 28:519-24. [PMID: 21928148 DOI: 10.1007/s10719-011-9351-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2011] [Revised: 09/02/2011] [Accepted: 09/05/2011] [Indexed: 11/29/2022]
Abstract
A convergent synthesis of the tetrasaccharide repeating unit of the O-antigen of the verotoxin producing E. coli O176 has been achieved in excellent yield adopting a [2+2] block glycosylation strategy. The β-D-mannosidic moiety of the tetrasaccharide was prepared from β-D-glucoside and α-D-galactosamine moiety was derived from D-galactal. The tetrasaccharide was synthesized as its 2-trimethylsilylethyl glycoside in excellent yield. All intermediate steps are high yielding.
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Affiliation(s)
- Goutam Guchhait
- Molecular Medicine Division, Bose Institute, P-1/12, C.I.T. Scheme VII M, Kolkata 700054, India
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Prifti E, Goetz S, Nepogodiev SA, Field RA. Synthesis of fluorescently labelled rhamnosides: probes for the evaluation of rhamnogalacturonan II biosynthetic enzymes. Carbohydr Res 2011; 346:1617-21. [DOI: 10.1016/j.carres.2011.03.039] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2011] [Revised: 03/25/2011] [Accepted: 03/29/2011] [Indexed: 11/26/2022]
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25
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Santra A, Misra AK. Convergent synthesis of the tetrasaccharide repeating unit of the O-antigen of Shigella boydii type 9. Beilstein J Org Chem 2011; 7:1182-8. [PMID: 21977201 PMCID: PMC3182426 DOI: 10.3762/bjoc.7.137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2011] [Accepted: 07/25/2011] [Indexed: 11/23/2022] Open
Abstract
A convenient synthesis of the tetrasaccharide repeating unit of the O-antigen of Shigella boydii type 9 has been achieved in excellent yield using a [2 + 2] block glycosylation strategy. TEMPO-mediated selective oxidation of the primary alcohol of the tetrasaccharide derivative 8 to the carboxylic group followed by deprotection of the functional groups furnished target tetrasaccharide 1 as its 4-methoxyphenyl glycoside in high yield.
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Affiliation(s)
- Abhishek Santra
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII-M, Kolkata-700054, India; Fax: 91-33-2355 3886
| | - Anup Kumar Misra
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII-M, Kolkata-700054, India; Fax: 91-33-2355 3886
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Nepogodiev SA, Fais M, Hughes DL, Field RA. Synthesis of apiose-containing oligosaccharide fragments of the plant cell wall: fragments of rhamnogalacturonan-II side chains A and B, and apiogalacturonan. Org Biomol Chem 2011; 9:6670-84. [PMID: 21847487 DOI: 10.1039/c1ob05587a] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Fragments of pectic polysaccharides rhamnogalacturonan-II (RG-II) and apiogalacturonan were synthesised using p-tolylthio apiofuranoside derivatives as key building blocks. Apiofuranose thioglycosides can be conveniently prepared by cyclization of the corresponding dithioacetals possessing a 2,3-O-isopropylidene group, which is required for preservation of the correct (3R) configuration of the apiofuranose ring. The remarkable stability of this protecting group in apiofuranose derivatives requires its replacement with a more reactive protecting group, such as a benzylidene acetal which was used in the synthesis of trisaccharide β-Rhap-(1→3')-β-Apif-(1→2)-α-GalAp-OMe. The X-ray crystal structure of the protected precursor of this trisaccharide has been elucidated.
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Affiliation(s)
- Sergey A Nepogodiev
- Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, UK NR4 7UH.
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Rauter AP, Xavier NM, Lucas SD, Santos M. Zeolites and other silicon-based promoters in carbohydrate chemistry. Adv Carbohydr Chem Biochem 2010; 63:29-99. [PMID: 20381704 DOI: 10.1016/s0065-2318(10)63003-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
Silicon-based materials, namely zeolites, clays, and silica gel have been widely used in organic synthesis, allowing mild reaction conditions and environmentally friendly methodologies. These heterogeneous catalysts are easy to handle, possess nontoxic and noncorrosive character and offer the possibility of recovery and reuse, thus contributing to clean and sustainable organic transformations. Moreover, they present shape-selective properties and provide stereo- and regiocontrol in chemical reactions. Herein, we survey the most significant applications of silicon-based materials as catalysts in carbohydrate chemistry, to mediate important transformations such as glycosylation, sugar protection and deprotection, and hydrolysis and dehydration. Emphasis is placed on their promising synthetic potential in comparison with conventional catalysts.
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Dalpozzo R, Bartoli G, Sambri L, Melchiorre P. Perchloric Acid and Its Salts: Very Powerful Catalysts in Organic Chemistry. Chem Rev 2010; 110:3501-51. [DOI: 10.1021/cr9003488] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Renato Dalpozzo
- Department of Chemistry, Università della Calabria, Ponte Bucci cubo 12/c,I-87030 Arcavacata di Rende (Cs), Italy
| | - Giuseppe Bartoli
- Department of Organic Chemistry “A. Mangini”, Università di Bologna, viale Risorgimento 4, I-40136 Bologna, Italy
| | - Letizia Sambri
- Department of Organic Chemistry “A. Mangini”, Università di Bologna, viale Risorgimento 4, I-40136 Bologna, Italy
| | - Paolo Melchiorre
- ICIQ - Institut Català d’Investigació Química, Avgda. Països Catalans 16, E-43007 Tarragona, Spain
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Krag J, Christiansen MS, Petersen JG, Jensen HH. Direct chemical glycosylation with pentenyl- and thioglycoside donors of N-acetylglucosamine. Carbohydr Res 2010; 345:872-9. [PMID: 20304386 DOI: 10.1016/j.carres.2010.02.013] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2010] [Revised: 02/10/2010] [Accepted: 02/16/2010] [Indexed: 10/19/2022]
Abstract
The use of pentenyl and thiophenyl glycosides of N-acetylglucosamine (GlcNAc) as glycosyl donors for the direct preparation of O-glycosides of GlcNAc promoted by N-iodosuccinimide (NIS) and metal triflates in dichloromethane has been investigated. Both glycosyl acceptors 1-octanol and (-)-menthol resulted in good glycosylation yields for both types of donors with pentenyl glycosides being somewhat superior in terms of yield. Carbohydrate-based acceptors were reacted with a benzylated GlcNAc-pentenyl donor but only provided disaccharides in poor to moderate yields. The results show that a variety of metal triflates are capable of acting as an activator for both NIS and the intermediate oxazoline.
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Affiliation(s)
- Jonas Krag
- Department of Chemistry, Aarhus University, Langelandsgade 140, DK-8000 Aarhus C, Denmark
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Kurosu M, Li K. MILD AND SELECTIVE O-GLYCOSYLATIONS OF PRIMARY ALCOHOLS WITH THE THIOGLUCOSAMINIDE DERIVATIVE PROMOTED BY N-IODOSUCCINIMIDE AND HBF(4)-ADOSROBED ON SILICA GEL. HETEROCYCLES 2010; 80:115-123. [PMID: 23239901 PMCID: PMC3518929 DOI: 10.3987/com-09-s(s)24] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Selective glycosylations of primary alcohols with the thioglucosaminide 1 are achieved by using NIS and HBF(4)-SiO(2). HBF(4)-SiO(2) is a mild Brønsted acid which requires primary alcohols or phenols to effectively activate 1 with NIS at rt. A wide range of functional groups are tolerated under these conditions.
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Affiliation(s)
- Michio Kurosu
- Department of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, 1682 Campus Delivery, Fort Collins, CO 80523-1682, USA
| | - Kai Li
- Department of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, 1682 Campus Delivery, Fort Collins, CO 80523-1682, USA
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Liu HX, Wu QP, Shu YN, Chen X, Xi XD, Du TJ, Zhang QS. A mild, efficient, and selective procedure for transprotection of acetonides to acetates catalyzed with HClO4–SiO2. Carbohydr Res 2009; 344:2342-8. [DOI: 10.1016/j.carres.2009.08.035] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2009] [Revised: 07/24/2009] [Accepted: 08/27/2009] [Indexed: 10/20/2022]
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Singh SP, Kumar TV, Chandrasekharam M, Giribabu L, Reddy PY. Microwave-Assisted, Rapid, Solvent-Free Aza-Michael Reaction by Perchloric Acid Impregnated on Silica Gel. SYNTHETIC COMMUN 2009. [DOI: 10.1080/00397910902883579] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Roy B, Field RA, Mukhopadhyay B. Synthesis of a tetrasaccharide related to the repeating unit of the O-antigen from Escherichia coli K-12. Carbohydr Res 2009; 344:2311-6. [PMID: 19836012 DOI: 10.1016/j.carres.2009.09.026] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2009] [Revised: 09/19/2009] [Accepted: 09/22/2009] [Indexed: 10/20/2022]
Abstract
Synthesis of a tetrasaccharide related to the repeating unit of the O-antigen from Escherichia coli K-12 is reported in the form of its octyl glycoside. Syntheses of the 1,2-cis glycosidic linkages have been accomplished by using NIS in conjunction with H(2)SO(4)-silica, and it was found to be stereoselective and productive. The synthesized tetrasaccharide will be utilized as the substrate for galactofuranosyltransferase, WbbI.
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Affiliation(s)
- Bimalendu Roy
- Indian Institute of Science Education and Research-Kolkata, Mohanpur Campus, P.O. BCKV Campus Main Office, Mohanpur, Nadia, West Bengal, India
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Encinas L, Chiara JL. Lipophilic Thioglycosides for the Solution-Phase Synthesis of Oligosaccharides Using Biphasic Liquid-Liquid Separation. European J Org Chem 2009. [DOI: 10.1002/ejoc.200900081] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Dasgupta S, Mukhopadhyay B. Synthesis of Oligosaccharides Related to a Biodynamic Saponin fromCalamus Insignisas Their Propargyl Glycosides. European J Org Chem 2008. [DOI: 10.1002/ejoc.200800834] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Xiong DC, Zhang LH, Ye XS. Bromodimethylsulfonium Bromide-Silver Triflate: A New Powerful Promoter System for the Activation of Thioglycosides. Adv Synth Catal 2008. [DOI: 10.1002/adsc.200800190] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Gupta P, Kumari N, Agarwal A, Vankar YD. HClO4·SiO2 catalysed synthesis of alkyl 3-deoxy-hex-2-enopyranosides from 2-hydroxy glucal ester: application in the synthesis of a cis-fused bicyclic ether and a 4-amino-C-glucoside. Org Biomol Chem 2008; 6:3948-56. [DOI: 10.1039/b810654a] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Dasgupta S, Pramanik K, Mukhopadhyay B. Oligosaccharides through reactivity tuning: convergent synthesis of the trisaccharides of the steroid glycoside Sokodoside B isolated from marine sponge Erylus placenta. Tetrahedron 2007. [DOI: 10.1016/j.tet.2007.09.072] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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41
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Mandal S, Mukhopadhyay B. Concise synthesis of two trisaccharides related to the saponin isolated from Centratherum anthelminticum. Tetrahedron 2007. [DOI: 10.1016/j.tet.2007.08.077] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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42
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Tiwari P, Misra AK. Synthesis of a Pentasaccharide Repeating Unit of the Extracellular Polysaccharide Produced by Lactobacillus Delbrueckii Subsp. Bulgaricus 291. J Carbohydr Chem 2007. [DOI: 10.1080/07328300701410676] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Pallavi Tiwari
- a Medicinal and Process Chemistry Division , Central Drug Research Institute , Lucknow, India
| | - Anup Kumar Misra
- a Medicinal and Process Chemistry Division , Central Drug Research Institute , Lucknow, India
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Dasgupta‡ S, Rajput‡ VK, Roy B, Mukhopadhyay B. Lanthanum Trifluoromethane-sulfonate‐Catalyzed Facile Synthesis of Per‐O‐acetylated Sugars and Their One‐Pot Conversion to S‐Aryl and O‐Alkyl/Aryl Glycosides. J Carbohydr Chem 2007. [DOI: 10.1080/07328300701298170] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Somnath Dasgupta‡
- a Medicinal and Process Chemistry Division , Central Drug Research Institute, Chattar Manzil Palace , Lucknow, 226001, UP, India
| | - Vishal Kumar Rajput‡
- a Medicinal and Process Chemistry Division , Central Drug Research Institute, Chattar Manzil Palace , Lucknow, 226001, UP, India
| | - Bimalendu Roy
- a Medicinal and Process Chemistry Division , Central Drug Research Institute, Chattar Manzil Palace , Lucknow, 226001, UP, India
| | - Balaram Mukhopadhyay
- a Medicinal and Process Chemistry Division , Central Drug Research Institute, Chattar Manzil Palace , Lucknow, 226001, UP, India
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Dasgupta S, Roy B, Mukhopadhyay B. NIS/H2SO4–Silica: a mild and efficient reagent system for the hydrolysis of thioglycosides. Carbohydr Res 2006; 341:2708-13. [PMID: 17014833 DOI: 10.1016/j.carres.2006.09.005] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2006] [Revised: 08/26/2006] [Accepted: 09/04/2006] [Indexed: 10/24/2022]
Abstract
Chemoselective hydrolysis of a variety of thioglycosides in the presence of a wide range of protecting groups has been achieved by using N-iodosuccinimide and H(2)SO(4) immobilized on silica in good to excellent yields.
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Affiliation(s)
- Somnath Dasgupta
- Medicinal and Process Chemistry Division, Central Drug Research Institute, Lucknow 226 001, India
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Agnihotri G, Misra AK. Synthesis of a di- and a trisaccharide related to the O-antigen of Escherichia coli O83:K24:H31. Carbohydr Res 2006; 341:2420-5. [PMID: 16884704 DOI: 10.1016/j.carres.2006.07.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2006] [Revised: 07/06/2006] [Accepted: 07/13/2006] [Indexed: 11/18/2022]
Abstract
Di- and trisaccharide fragments related to the repeating unit of the O-antigen of Escherichia coli O83:K24:H31 have been synthesized as their methyl glycoside analogs starting from readily available monosaccharides.
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Affiliation(s)
- Geetanjali Agnihotri
- Medicinal and Process Chemistry Division, Central Drug Research Institute, Chattar Manzil Palace, Lucknow 226001, UP, India
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Sulfuric acid immobilized on silica: an efficient reusable catalyst for the synthesis of O-isopropylidene sugar derivatives. Tetrahedron Lett 2006. [DOI: 10.1016/j.tetlet.2006.06.050] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Mukhopadhyay B, Field RA. Convergent synthesis of a trisaccharide as its 2-(trimethylsilyl)ethyl glycoside related to the flavonoid triglycoside from Gymnema sylvestre. Carbohydr Res 2006; 341:1697-701. [PMID: 16603139 DOI: 10.1016/j.carres.2006.03.019] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2006] [Revised: 03/07/2006] [Accepted: 03/14/2006] [Indexed: 10/24/2022]
Abstract
The glycone part of the flavonoid triglycoside, kaempferol 3-O-beta-D-glucopyranosyl-(1-->4)-alpha-L-rhamnopyranosyl-(1-->6)-beta-D-galactopyranoside, has been synthesized in good yield and stereoselectivity using N-iodosuccinimide and HClO4-silica promoted glycosylations of thioglycoside donors.
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Affiliation(s)
- Balaram Mukhopadhyay
- Centre for Carbohydrate Chemistry, School of Chemical Sciences and Pharmacy, University of East Anglia, Norwich NR4 7TJ, UK
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Khan AT, Ghosh S, Choudhury LH. Perchloric Acid Impregnated on Silica Gel (HClO4/SiO2): A Versatile Catalyst for Michael Addition of Thiols to the Electron-Deficient Alkenes. European J Org Chem 2006. [DOI: 10.1002/ejoc.200600006] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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49
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Mukhopadhyay B, Maurer SV, Rudolph N, van Well RM, Russell DA, Field RA. From Solution Phase to “On-Column” Chemistry: Trichloroacetimidate-Based Glycosylation Promoted by Perchloric Acid−Silica. J Org Chem 2005; 70:9059-62. [PMID: 16238354 DOI: 10.1021/jo051390g] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
[reaction: see text] Activation of ester-protected glycosyl trichloroacetimidate donors by perchloric acid immobilized on silica afforded 1,2-trans disaccharides in 60-90% yields. Applying this approach to one-pot sequential glycosylation resulted in efficient syntheses of the N-linked glycan trimannoside and Le(X) and Le(A) trisaccharides in very good yield (76%, 62%, and 59% yields, respectively). Solution phase reactions were also translated to a solid phase format; priming the top of a standard silica chromatography column with perchloric acid immobilized on silica facilitated "on-column" glycosylation with subsequent "in situ" purification of products. Coupling yields from this approach were comparable to those obtained from the corresponding solution-phase disaccharide couplings. A series of glycosylated amino acids were also synthesized in high yield with use of the on-column approach.
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Affiliation(s)
- Balaram Mukhopadhyay
- Centre for Carbohydrate Chemistry, School of Chemical Sciences and Pharmacy, University of East Anglia, Norwich, UK
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