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Sidduri A, Dresel MJ, Knapp S. Incorporation of an Isohexide Subunit Improves the Drug-like Properties of Bioactive Compounds. ACS Med Chem Lett 2023; 14:176-182. [PMID: 36793427 PMCID: PMC9923839 DOI: 10.1021/acsmedchemlett.2c00476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Accepted: 01/17/2023] [Indexed: 01/22/2023] Open
Abstract
An enhanced ability to pre-engineer favorable drug-likeness qualities into bioactive molecules would focus and streamline the drug development process. We find that phenols, carboxylic acids, and a purine react with isosorbide ("GRAS" designated) under Mitsunobu coupling conditions to deliver the isoidide conjugates selectively and efficiently. Such conjugates show improved solubility and permeability properties compared with the bare scaffold compounds themselves, and the purine adduct may have applications as a 2'-deoxyadenosine isostere. We anticipate additional benefits, implied by their structures, in metabolic stability and reduced toxicity of the isoidide conjugates as well.
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Affiliation(s)
- Achyutharao Sidduri
- Department
of Chemistry & Chemical Biology, Rutgers
The State University of New Jersey, 321 Bevier Road, Piscataway, New Jersey 08854, United States
- Aunova
Medchem LLC, West Orange, New Jersey 07052, United States
| | - Mark J. Dresel
- Department
of Chemistry & Chemical Biology, Rutgers
The State University of New Jersey, 321 Bevier Road, Piscataway, New Jersey 08854, United States
| | - Spencer Knapp
- Department
of Chemistry & Chemical Biology, Rutgers
The State University of New Jersey, 321 Bevier Road, Piscataway, New Jersey 08854, United States
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2
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Ngo TTD, Huynh KD, Ibrahim H, Nguyen TH, Bournaud C, Toffano M, Vo-Thanh G. Chiral catalysts derived from biomass: design, synthesis and applications in asymmetric catalysis. VIETNAM JOURNAL OF CHEMISTRY 2020. [DOI: 10.1002/vjch.201900177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Thi Thuy Duong Ngo
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, ICMMO. UMR 8182. Laboratoire de Catalyse Moléculaire. Université Paris-Sud, Université Paris Saclay; 91405 Orsay Cedex France
| | - Khanh Duy Huynh
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, ICMMO. UMR 8182. Laboratoire de Catalyse Moléculaire. Université Paris-Sud, Université Paris Saclay; 91405 Orsay Cedex France
| | - Houssein Ibrahim
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, ICMMO. UMR 8182. Laboratoire de Catalyse Moléculaire. Université Paris-Sud, Université Paris Saclay; 91405 Orsay Cedex France
| | - Thi Huong Nguyen
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, ICMMO. UMR 8182. Laboratoire de Catalyse Moléculaire. Université Paris-Sud, Université Paris Saclay; 91405 Orsay Cedex France
| | - Chloée Bournaud
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, ICMMO. UMR 8182. Laboratoire de Catalyse Moléculaire. Université Paris-Sud, Université Paris Saclay; 91405 Orsay Cedex France
| | | | - Giang Vo-Thanh
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, ICMMO. UMR 8182. Laboratoire de Catalyse Moléculaire. Université Paris-Sud, Université Paris Saclay; 91405 Orsay Cedex France
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3
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Jacolot M, Moebs-Sanchez S, Popowycz F. Diastereoselective Iridium-Catalyzed Amination of Biosourced Isohexides Through Borrowing Hydrogen Methodology. J Org Chem 2018; 83:9456-9463. [DOI: 10.1021/acs.joc.8b01162] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Maïwenn Jacolot
- Université de Lyon, INSA Lyon, ICBMS, UMR 5246, CNRS - Université Lyon 1 - CPE Lyon, Bâtiment Lederer, F-69622 Villeurbanne Cedex, France
| | - Sylvie Moebs-Sanchez
- Université de Lyon, INSA Lyon, ICBMS, UMR 5246, CNRS - Université Lyon 1 - CPE Lyon, Bâtiment Lederer, F-69622 Villeurbanne Cedex, France
| | - Florence Popowycz
- Université de Lyon, INSA Lyon, ICBMS, UMR 5246, CNRS - Université Lyon 1 - CPE Lyon, Bâtiment Lederer, F-69622 Villeurbanne Cedex, France
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Wu J, Thiyagarajan S, Fonseca Guerra C, Eduard P, Lutz M, Noordover BAJ, Koning CE, van Es DS. Isohexide Dinitriles: A Versatile Family of Renewable Platform Chemicals. CHEMSUSCHEM 2017; 10:3202-3211. [PMID: 28590079 DOI: 10.1002/cssc.201700617] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2017] [Indexed: 06/07/2023]
Abstract
Building blocks of isohexides extended by one carbon atom at the 2- or 5-positions are now synthetically accessible by a convenient, selective, base-catalyzed epimerization of the corresponding dinitriles. Kinetic experiments using the strong organic base 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) show that all three possible isohexide dinitrile isomers exist within a dynamic equilibrium. An epimerization mechanism based on density functional theory (DFT) calculations is proposed. Structural identification of all three possible isomers is based on NMR analysis and single crystal x-ray crystallography. DFT calculations confirm that the observed crystal structures are indeed the lowest energy conformers of these isohexide derivatives.
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Affiliation(s)
- Jing Wu
- Co-Innovation Center of Textile Industry, Donghua University, Northern Renmin Road 2999, Shanghai, P.R. China
- Food & Biobased Research, Wageningen University, Bornse Weilanden 9, 6708, WG, Wageningen, The Netherlands
- Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, Den Dolech 2, 5600, MB, Eindhoven, The Netherlands
| | - Shanmugam Thiyagarajan
- Food & Biobased Research, Wageningen University, Bornse Weilanden 9, 6708, WG, Wageningen, The Netherlands
| | - Célia Fonseca Guerra
- Department of Theoretical Chemistry and Amsterdam Center for multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081, HV, Amsterdam, The Netherlands
- Leiden Institut of Chemistry, Gorlaeus Laboratories, Leiden University, P.O. Box 9502, 2300, RA, Leiden, The Netherlands
| | - Pieter Eduard
- Food & Biobased Research, Wageningen University, Bornse Weilanden 9, 6708, WG, Wageningen, The Netherlands
| | - Martin Lutz
- Bijvoet Center for Biomolecular Research, Crystal and Structural Chemistry, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands
| | - Bart A J Noordover
- Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, Den Dolech 2, 5600, MB, Eindhoven, The Netherlands
| | - Cor E Koning
- Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, Den Dolech 2, 5600, MB, Eindhoven, The Netherlands
| | - Daan S van Es
- Food & Biobased Research, Wageningen University, Bornse Weilanden 9, 6708, WG, Wageningen, The Netherlands
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5
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Huynh KD, Ibrahim H, Bouchardy L, Bournaud C, Kolodziej E, Toffano M, Vo-Thanh G. Biosourced Ligands from Isosorbide for the Ethylation of Aldehydes or Alkynylation of Imines. ASIAN J ORG CHEM 2016. [DOI: 10.1002/ajoc.201600291] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- Khanh-Duy Huynh
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR8182; Université Paris Sud-Université Paris Saclay; 91405 Orsay Cedex France
| | - Houssein Ibrahim
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR8182; Université Paris Sud-Université Paris Saclay; 91405 Orsay Cedex France
| | - Lucie Bouchardy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR8182; Université Paris Sud-Université Paris Saclay; 91405 Orsay Cedex France
| | - Chloée Bournaud
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR8182; Université Paris Sud-Université Paris Saclay; 91405 Orsay Cedex France
| | - Emilie Kolodziej
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR8182; Université Paris Sud-Université Paris Saclay; 91405 Orsay Cedex France
| | - Martial Toffano
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR8182; Université Paris Sud-Université Paris Saclay; 91405 Orsay Cedex France
| | - Giang Vo-Thanh
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, CNRS UMR8182; Université Paris Sud-Université Paris Saclay; 91405 Orsay Cedex France
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Janvier M, Moebs-Sanchez S, Popowycz F. Bio-Based Amides from Renewable Isosorbide by a Direct and Atom-Economic Boric Acid Amidation Methodology. European J Org Chem 2016. [DOI: 10.1002/ejoc.201600186] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Kadraoui M, Maunoury T, Derriche Z, Guillarme S, Saluzzo C. Isohexides as Versatile Scaffolds for Asymmetric Catalysis. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402851] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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8
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Dobrota C, Fiaud JC, Toffano M. P-Aryl-Diphenylphospholanes and their Phospholanium Salts as Efficient Monodentate Ligands for Asymmetric Rhodium-Catalyzed Hydrogenation. ChemCatChem 2014. [DOI: 10.1002/cctc.201402687] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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9
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Hernández-Guerra D, Rodríguez MS, Suárez E. Fragmentation of Carbohydrate Anomeric Alkoxyl Radicals: Synthesis of Chiral Polyhydroxylated β-Iodo- and Alkenylorganophosphorus(V) Compounds. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402387] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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