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Kwon HC, Lee DH, Yoon M, Nayab S, Lee H, Han JH. Novel Cu(II) complexes as DNA-destabilizing agents and their DNA nuclease activity. Dalton Trans 2023; 52:16802-16811. [PMID: 37902974 DOI: 10.1039/d3dt02615a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2023]
Abstract
Here, we report a series of four novel Cu complexes, namely 2-(piperidin-1-ylmethyl)quinoline copper(II) nitrate, [LACu(NO3)2] (Cu1), 4-(quinolin-2-ylmethyl)morpholine copper(II) nitrate, [LBCu(NO3)2] (Cu2), 4-(quinolin-2-ylmethyl)morpholine copper(II) chloride, [LBCuCl2] (Cu3), and 2-(piperidin-1-ylmethyl)pyridine copper(II) chloride, [LCCu(μ-Cl)Cl]2 (Cu4). X-ray diffraction studies revealed that the geometry around the Cu(II) center could be best described as distorted octahedral in Cu1 and Cu2, whereas Cu3 and Cu4 showed distorted tetrahedral and square pyramidal geometries, respectively. DNA binding studies showed that Cu complexes Cu1-3 containing quinoline interacted via minor groove binding, whereas the Cu4 complex containing pyridine interacted via intercalation. All Cu complexes containing quinoline and pyridine caused destabilization of DNA at specific homogeneous G-C regions. The Cu1-3 complexes as groove binders destabilized the DNA structure much more than the Cu4 complex as an intercalator. Regarding groove binders, the Cu2 complex containing quinoline and morpholine caused the highest distortion and destabilization of the DNA structure, leading to high DNA cleavage efficiency.
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Affiliation(s)
- Hee Chang Kwon
- Department of Chemical and Biological Engineering, Andong National University, 1375 Gyeongdong-ro, Andong, Gyeongbuk, Korea, 36729.
| | - Da Hyun Lee
- Department of Chemical and Biological Engineering, Andong National University, 1375 Gyeongdong-ro, Andong, Gyeongbuk, Korea, 36729.
| | - Minyoung Yoon
- Department of Chemistry and Green-Nano Materials Research Center, Kyungpook National University, 80 Daehakro, Bukgu, Daegu 41566, Republic of Korea.
| | - Saira Nayab
- Department of Chemistry and Green-Nano Materials Research Center, Kyungpook National University, 80 Daehakro, Bukgu, Daegu 41566, Republic of Korea.
- Department of Chemistry, Shaheed Benazir Bhutto University (SBBU), Sheringal Upper Dir (18050), Khyber Pakhtunkhwa, Islamic Republic of Pakistan
| | - Hyosun Lee
- Department of Chemistry and Green-Nano Materials Research Center, Kyungpook National University, 80 Daehakro, Bukgu, Daegu 41566, Republic of Korea.
| | - Ji Hoon Han
- Department of Chemical and Biological Engineering, Andong National University, 1375 Gyeongdong-ro, Andong, Gyeongbuk, Korea, 36729.
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Singha K, Habib I, Hossain M. Quinoline N‐Oxide: A Versatile Precursor in Organic Transformations. ChemistrySelect 2022. [DOI: 10.1002/slct.202203537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Koustav Singha
- Synthetic Organic Research Laboratory UGC-Human Resource Development Centre (Chemistry) University of North Bengal Siliguri Darjeeling 734013 India
| | - Imran Habib
- Synthetic Organic Research Laboratory UGC-Human Resource Development Centre (Chemistry) University of North Bengal Siliguri Darjeeling 734013 India
| | - Mossaraf Hossain
- Synthetic Organic Research Laboratory UGC-Human Resource Development Centre (Chemistry) University of North Bengal Siliguri Darjeeling 734013 India
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3
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Jeong AR, Nayab S, Kim E, Yeo H, Lee H. Norbornene and methyl methacrylate polymerizations catalyzed by palladium(II) complexes bearing aminomethylpyridine and aminomethylquinoline derivatives. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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4
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Woo J, Christian AH, Burgess SA, Jiang Y, Mansoor UF, Levin MD. Scaffold hopping by net photochemical carbon deletion of azaarenes. Science 2022; 376:527-532. [PMID: 35482853 PMCID: PMC9107930 DOI: 10.1126/science.abo4282] [Citation(s) in RCA: 55] [Impact Index Per Article: 27.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Discovery chemists routinely identify purpose-tailored molecules through an iterative structural optimization approach, but the preparation of each successive candidate in a compound series can rarely be conducted in a manner matching their thought process. This is because many of the necessary chemical transformations required to modify compound cores in a straightforward fashion are not applicable in complex contexts. We report a method that addresses one facet of this problem by allowing chemists to hop directly between chemically distinct heteroaromatic scaffolds. Specifically, we show that selective photolysis of quinoline N-oxides with 390-nanometer light followed by acid-promoted rearrangement affords N-acylindoles while showing broad compatibility with medicinally relevant functionality. Applications to late-stage skeletal modification of compounds of pharmaceutical interest and more complex transformations involving serial single-atom changes are demonstrated.
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Affiliation(s)
- Jisoo Woo
- Department of Chemistry, University of Chicago, Chicago, IL, USA
| | | | | | - Yuan Jiang
- Analytical Research and Development, Merck & Co., Inc., Boston, MA, USA
| | | | - Mark D Levin
- Department of Chemistry, University of Chicago, Chicago, IL, USA
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5
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Effect of initiator on the catalytic performance of zinc(II) complexes supported by aminomethylquinoline and aminomethylpyridine derived ligands in stereoselective ring opening polymerization of rac-lactide. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.115696] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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6
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Ham WS, Choi H, Zhang J, Kim D, Chang S. C2-Selective, Functional-Group-Divergent Amination of Pyrimidines by Enthalpy-Controlled Nucleophilic Functionalization. J Am Chem Soc 2022; 144:2885-2892. [PMID: 35138104 DOI: 10.1021/jacs.1c13373] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Synthesis of heteroaryl amines has been an important topic in organic chemistry because of their importance in small-molecule discovery. In particular, 2-aminopyrimidines represent a highly privileged structural motif that is prevalent in bioactive molecules, but a general strategy to introduce the pyrimidine C2-N bonds via direct functionalization is elusive. Here we describe a synthetic platform for site-selective C-H functionalization that affords pyrimidinyl iminium salt intermediates, which then can be transformed into various amine products in situ. Mechanism-based reagent design allowed for the C2-selective amination of pyrimidines, opening the new scope of site-selective heteroaryl C-H functionalization. Our method is compatible with a broad range of pyrimidines with sensitive functional groups and can access complex aminopyrimidines with high selectivity.
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Affiliation(s)
- Won Seok Ham
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, South Korea.,Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, South Korea
| | - Hoonchul Choi
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, South Korea.,Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, South Korea
| | - Jianbo Zhang
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, South Korea.,Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, South Korea
| | - Dongwook Kim
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, South Korea.,Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, South Korea
| | - Sukbok Chang
- Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS), Daejeon 34141, South Korea.,Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, South Korea
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7
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Sahin Y, Sika-Nartey AT, Ercan KE, Kocak Y, Senol S, Ozensoy E, Türkmen YE. Precious Metal-Free LaMnO 3 Perovskite Catalyst with an Optimized Nanostructure for Aerobic C-H Bond Activation Reactions: Alkylarene Oxidation and Naphthol Dimerization. ACS APPLIED MATERIALS & INTERFACES 2021; 13:5099-5110. [PMID: 33492925 DOI: 10.1021/acsami.0c20490] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
In this article, we describe the development of a new aerobic C-H oxidation methodology catalyzed by a precious metal-free LaMnO3 perovskite catalyst. Molecular oxygen is used as the sole oxidant in this approach, obviating the need for other expensive and/or environmentally hazardous stoichiometric oxidants. The electronic and structural properties of the LaMnO3 catalysts were systematically optimized, and a reductive pretreatment protocol was proved to be essential for acquiring the observed high catalytic activities. It is demonstrated that this newly developed method was extremely effective for the oxidation of alkylarenes to ketones as well as for the oxidative dimerization of 2-naphthol to 1,1-binaphthyl-2,2-diol (BINOL), a particularly important scaffold for asymmetric catalysis. Detailed spectroscopic and mechanistic studies provided valuable insights into the structural aspects of the active catalyst and the reaction mechanism.
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Affiliation(s)
- Yesim Sahin
- Department of Chemistry, Faculty of Science, Bilkent University, 06800 Ankara, Turkey
| | - Abel T Sika-Nartey
- Department of Chemistry, Faculty of Science, Bilkent University, 06800 Ankara, Turkey
| | - Kerem E Ercan
- Department of Chemistry, Faculty of Science, Bilkent University, 06800 Ankara, Turkey
| | - Yusuf Kocak
- Department of Chemistry, Faculty of Science, Bilkent University, 06800 Ankara, Turkey
| | - Sinem Senol
- Department of Chemistry, Faculty of Science, Bilkent University, 06800 Ankara, Turkey
| | - Emrah Ozensoy
- Department of Chemistry, Faculty of Science, Bilkent University, 06800 Ankara, Turkey
| | - Yunus E Türkmen
- Department of Chemistry, Faculty of Science, Bilkent University, 06800 Ankara, Turkey
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8
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Recent Advances in the Synthesis of C2‐Functionalized Pyridines and Quinolines Using
N
‐Oxide Chemistry. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000910] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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9
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Xie L, Peng S, Liu F, Yi J, Wang M, Tang Z, Xu X, He W. Metal‐free Deoxygenative 2‐Amidation of Quinoline
N
‐oxides with Nitriles via a Radical Activation Pathway. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201800918] [Citation(s) in RCA: 89] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Long‐Yong Xie
- Hunan Provincial Engineering Research Center for Ginkgo bilobaHunan University of Science and Engineering Yongzhou 425100 People's Republic of China
| | - Sha Peng
- Hunan Provincial Engineering Research Center for Ginkgo bilobaHunan University of Science and Engineering Yongzhou 425100 People's Republic of China
| | - Fang Liu
- Hunan Provincial Engineering Research Center for Ginkgo bilobaHunan University of Science and Engineering Yongzhou 425100 People's Republic of China
| | - Jin‐Yu Yi
- Hunan Provincial Engineering Research Center for Ginkgo bilobaHunan University of Science and Engineering Yongzhou 425100 People's Republic of China
| | - Ming Wang
- Key Laboratory of Theoretical Organic Chemistry and Functional Molecule of Ministry of EducationHunan University of Science and Technology Xiangtan 411201 People's Republic of China
| | - Zilong Tang
- Key Laboratory of Theoretical Organic Chemistry and Functional Molecule of Ministry of EducationHunan University of Science and Technology Xiangtan 411201 People's Republic of China
| | - Xinhua Xu
- State Key Laboratory of Chemo/Biosensing and ChemometricsHunan University, Changsha 410082, People's Republic of China
| | - Wei‐Min He
- Hunan Provincial Engineering Research Center for Ginkgo bilobaHunan University of Science and Engineering Yongzhou 425100 People's Republic of China
- State Key Laboratory of Chemo/Biosensing and ChemometricsHunan University, Changsha 410082, People's Republic of China
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