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You Y, Tang Y, Yin W, Liu X, Gao P, Zhang C, Tembrock LR, Zhao Y, Yang Z. From genome to proteome: Comprehensive identification of venom toxins from the Chinese funnel-web spider (Macrothelidae: Macrothele yani). Int J Biol Macromol 2024; 268:131780. [PMID: 38657926 DOI: 10.1016/j.ijbiomac.2024.131780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2024] [Revised: 03/26/2024] [Accepted: 04/21/2024] [Indexed: 04/26/2024]
Abstract
Macrothelidae is a family of mygalomorph spiders containing the extant genera Macrothele and Vacrothele. China is an important center of diversity for Macrothele with 65 % of the known species occurring there. Previous work on Macrothele was able to uncover several important toxin compounds including Raventoxin which may have applications in biomedicine and agricultural chemistry. Despite the importance of Macrothele spiders, high-quality reference genomes are still lacking, which hinders our understanding and application of the toxin compounds. In this study, we assembled the genome of the Macrothele yani to help fill gaps in our understanding of toxin biology in this lineage of spiders to encourage the future study and applications of these compounds. The final assembled genome was 6.79 Gb in total length, had a contig N50 of 21.44 Mb, and scaffold N50 of 156.16 Mb. Hi-C scaffolding assigned 98.19 % of the genome to 46 pseudo-chromosomes with a BUSCO score of 95.7 % for the core eukaryotic gene set. The assembled genome was found to contain 75.62 % repetitive DNA and a total of 39,687 protein-coding genes were annotated making it the spider genome with highest number of genes. Through integrated analysis of venom gland transcriptomics and venom proteomics, a total of 194 venom toxins were identified, including 38 disulfide-rich peptide neurotoxins, among which 12 were ICK knottin peptides. In summary, we present the first high-quality genome assembly at the chromosomal level for any Macrothelidae spider, filling an important gap in our knowledge of these spiders. Such high-quality genomic data will be invaluable as a reference in resolving Araneae spider phylogenies and in screening different spider species for novel compounds applicable to numerous medical and agricultural applications.
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Affiliation(s)
- Yongming You
- Yunnan Provincial Key Laboratory of Entomological Biopharmaceutical R & D, Dali University, Dali 671000, China; National-Local Joint Engineering Research Center of Entomoceutics, Dali University, Dali 671000, China; Innovative Team of Dali University for Medicinal Insects & Arachnids Resources Digital Development, Dali 671000, China
| | - Yani Tang
- Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, South Waihuan Road, Chenggong District, Kunming 650500, China; MEC International Joint Laboratory for Palaeobiology and Palaeoenvironment, Yunnan University, Kunming 650500, China
| | - Wenhao Yin
- Yunnan Provincial Key Laboratory of Entomological Biopharmaceutical R & D, Dali University, Dali 671000, China; National-Local Joint Engineering Research Center of Entomoceutics, Dali University, Dali 671000, China; Innovative Team of Dali University for Medicinal Insects & Arachnids Resources Digital Development, Dali 671000, China
| | - Xinxin Liu
- Yunnan Provincial Key Laboratory of Entomological Biopharmaceutical R & D, Dali University, Dali 671000, China; National-Local Joint Engineering Research Center of Entomoceutics, Dali University, Dali 671000, China; Innovative Team of Dali University for Medicinal Insects & Arachnids Resources Digital Development, Dali 671000, China
| | - Pengfei Gao
- Yunnan Provincial Key Laboratory of Entomological Biopharmaceutical R & D, Dali University, Dali 671000, China; National-Local Joint Engineering Research Center of Entomoceutics, Dali University, Dali 671000, China; Innovative Team of Dali University for Medicinal Insects & Arachnids Resources Digital Development, Dali 671000, China
| | - Chenggui Zhang
- Yunnan Provincial Key Laboratory of Entomological Biopharmaceutical R & D, Dali University, Dali 671000, China; National-Local Joint Engineering Research Center of Entomoceutics, Dali University, Dali 671000, China; Innovative Team of Dali University for Medicinal Insects & Arachnids Resources Digital Development, Dali 671000, China
| | - Luke R Tembrock
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO 80523, USA..
| | - Yu Zhao
- Yunnan Provincial Key Laboratory of Entomological Biopharmaceutical R & D, Dali University, Dali 671000, China; National-Local Joint Engineering Research Center of Entomoceutics, Dali University, Dali 671000, China; Innovative Team of Dali University for Medicinal Insects & Arachnids Resources Digital Development, Dali 671000, China.
| | - Zizhong Yang
- Yunnan Provincial Key Laboratory of Entomological Biopharmaceutical R & D, Dali University, Dali 671000, China; National-Local Joint Engineering Research Center of Entomoceutics, Dali University, Dali 671000, China; Innovative Team of Dali University for Medicinal Insects & Arachnids Resources Digital Development, Dali 671000, China.
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Ajdi B, El Asbahani A, El Hidan MA, Bocquet M, Falconnet L, Ait Hamza M, Elmourid A, Touloun O, Boubaker H, Bulet P. Molecular diversity assessed by MALDI mass spectrometry of two scorpion species venom from two different locations in Morocco. Toxicon 2024; 238:107562. [PMID: 38103799 DOI: 10.1016/j.toxicon.2023.107562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 11/26/2023] [Accepted: 12/11/2023] [Indexed: 12/19/2023]
Abstract
Scorpion venom is a cocktail of molecules whose composition is remarkably plastic, controlled by several factors. The Moroccan scorpion fauna is characterized by its richness and high rate of endemism and the venom molecular variability of many species is not yet well characterized. The aim of the present study was to highlight the molecular variability of the venom composition of Androctonus amoreuxi and Buthacus stockmanni (endemic species), both belonging to the Buthidae family, collected from two Moroccan regions, Zagora and Tan-tan. Characterization of the molecular mass fingerprints (MFPs) of each specimen was performed by Matrix-assisted laser desorption ionization-mass spectrometry (MALDI-MS) using a sandwich (Sand) and a dried-droplet (DD) sample preparation and dilutions. Considering these two methods, a total of 828 ion signals were detected, and Sand method produced more adducts (56%) than DD (44%). We observed interspecific variations in the venom composition between these two species showing they share 235 ion signals, while 226 and 367 are specific for these two species, respectively. Moreover, B. stockmanni specimens showed a clear difference in their MFPs between the two geographical areas studied, suggesting intraspecific variations. Moreover, specimens from each population also show an intraspecific variability. In addition, for the same individual, a variation in the venom composition was also recorded depending on the milking frequency. Our results confirmed the presence of characteristic components in each extracted venom sample. In conclusion, MFPs assessed by MALDI-MS represent a fast, non-supervised, sensitive, reliable and cost-efficient approach for taxonomic identification and molecular variability characterization. This study undoubtedly represents a step forward for understanding the scorpion venom plasticity, intra/inter variations, and their temporal and geographical variability.
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Affiliation(s)
- Boujemaa Ajdi
- Laboratory of Microbial Biotechnology and Plant Protection, Faculty of Sciences, University of Ibn Zohr, Agadir, Morocco; Institute for Advanced Biosciences, CR Inserm U1209, CNRSUMR 5309, University of Grenoble-Alpes, 38000, Grenoble, France; Platform BioPark Archamps, 74160, Archamps, France.
| | - Abdelhafed El Asbahani
- Applied Chemistry and Environment Laboratory, Team of Bio-organic Chemistry and Natural Substances, Faculty of Sciences, University of Ibn Zohr, Agadir, Morocco.
| | - Moulay Abdelmonaim El Hidan
- Laboratory of Biotechnology and Valorization of Natural Resources, Faculty of Applied Sciences, Ibn Zohr University, Agadir, Morocco.
| | - Michel Bocquet
- Platform BioPark Archamps, 74160, Archamps, France; Apimedia, 74370, Annecy, France
| | | | - Mohamed Ait Hamza
- Laboratory of Biotechnology and Valorization of Natural Resources, Faculty of Applied Sciences, Ibn Zohr University, Agadir, Morocco.
| | - Abdessamad Elmourid
- Polyvalent Team in Research and Development (EPVRD), Department of Biology & Geology, Polydisciplinary Faculty, Sultan Moulay Slimane University, Beni Mellal, 23030, Morocco.
| | - Oulaid Touloun
- Polyvalent Team in Research and Development (EPVRD), Department of Biology & Geology, Polydisciplinary Faculty, Sultan Moulay Slimane University, Beni Mellal, 23030, Morocco.
| | - Hassan Boubaker
- Laboratory of Microbial Biotechnology and Plant Protection, Faculty of Sciences, University of Ibn Zohr, Agadir, Morocco.
| | - Philippe Bulet
- Institute for Advanced Biosciences, CR Inserm U1209, CNRSUMR 5309, University of Grenoble-Alpes, 38000, Grenoble, France; Platform BioPark Archamps, 74160, Archamps, France.
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3
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Hernandez Duran L, Wilson DT, Rymer TL. Exploring behavioral traits over different contexts in four species of Australian funnel-web spiders. Curr Zool 2023; 69:766-774. [PMID: 37876639 PMCID: PMC10591153 DOI: 10.1093/cz/zoac080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Accepted: 10/04/2022] [Indexed: 10/26/2023] Open
Abstract
Australian funnel-web spiders are arguably the most venomous spiders in the world, with much research focusing on this aspect of their biology. However, other aspects related to their life history, ecology and behaviour have been overlooked. For the first time, we assessed repeatability, namely risk-taking behaviour, aggressiveness and activity in the contexts of predation, conspecific tolerance and exploration of a new territory in four species of Australian funnel-web spiders: two are closely related, Hadronyche valida and H. infensa, and two have overlapping distributions but occupy different habitats, H. cerberea and Atrax robustus. We also compared behaviors between species. At the species level, we found that H. valida showed consistency in risk-taking behavior when exposed to a predator stimulus, aggressiveness against conspecifics, and exploration of a new territory. In contrast, in the other species, only A. robustus showed repeatability in the context of exploration of a new territory. These results suggest that some behavioral traits are likely more flexible than others, and that the repeatability of behaviors may be species-specific in funnel-webs. When we compared species, we found differences in risk-taking behavior and defensiveness. This study provides novel insights to understanding variation in behavioral traits within and between species of funnel-web spiders, suggesting that some behavioral traits are likely context and/or species dependent, as a result of their evolutionary history. These findings provide key insights for understanding the ecological role of behavior and venom deployment in venomous animals, and a greater understanding of behavior in these medically significant and iconic spiders that are of conservation concern.
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Affiliation(s)
- Linda Hernandez Duran
- College of Science and Engineering, James Cook University, P.O. Box 6811, Cairns, QLD 4870, Australia
- Centre for Tropical Environmental and Sustainability Sciences, James Cook University, Cairns, QLD 4870, Australia
| | - David Thomas Wilson
- Centre for Molecular Therapeutics, Australian Institute for Tropical Health and Medicine, James Cook University, Cairns, QLD 4878, Australia
| | - Tasmin Lee Rymer
- College of Science and Engineering, James Cook University, P.O. Box 6811, Cairns, QLD 4870, Australia
- Centre for Tropical Environmental and Sustainability Sciences, James Cook University, Cairns, QLD 4870, Australia
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4
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Lyons K, Dugon MM, Boyd A, Healy K. Venom extraction method influences venom composition and potency in the giant house spider Eratigena atrica (C. L. Koch, 1843). Toxicon 2023; 234:107303. [PMID: 37775046 DOI: 10.1016/j.toxicon.2023.107303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Revised: 09/19/2023] [Accepted: 09/26/2023] [Indexed: 10/01/2023]
Abstract
Extraction is the first step when investigating venom composition and function. In small invertebrates, widely used extraction methods include electrostimulation and venom gland extraction, however, the influence of these methods on composition and toxicology is poorly understood. Using the Giant House Spider Eratigena atrica as a model, we show that electrostimulation and venom gland removal extraction methods produce different protein profiles as assessed by Coomassie-stained SDS-PAGE and significantly different potencies in the cricket Acheta domesticus.
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Affiliation(s)
- Keith Lyons
- Macroecology Lab, School of Natural Sciences, Ryan Institute, University of Galway, H91 TK33, Galway, Ireland.
| | - Michel M Dugon
- Venom Systems & Proteomics Lab, School of Natural Sciences, Ryan Institute, University of Galway, H91 TK33, Galway, Ireland
| | - Aoife Boyd
- Pathogenic Mechanisms Research Group, School of Natural Sciences, Ryan Institute, University of Galway, H91 TK33, Galway, Ireland
| | - Kevin Healy
- Macroecology Lab, School of Natural Sciences, Ryan Institute, University of Galway, H91 TK33, Galway, Ireland
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5
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Ramírez DS, Alzate JF, Simone Y, van der Meijden A, Guevara G, Franco Pérez LM, González-Gómez JC, Prada Quiroga CF. Intersexual Differences in the Gene Expression of Phoneutria depilata (Araneae, Ctenidae) Toxins Revealed by Venom Gland Transcriptome Analyses. Toxins (Basel) 2023; 15:429. [PMID: 37505698 PMCID: PMC10467060 DOI: 10.3390/toxins15070429] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 06/17/2023] [Accepted: 06/23/2023] [Indexed: 07/29/2023] Open
Abstract
The wandering spider, Phoneutria depilata, is one of Colombia's most active nocturnal arthropod predators of vertebrates and invertebrates. Its venom has been a relevant subject of study in the last two decades. However, the scarcity of transcriptomic data for the species limits our knowledge of the distinct components present in its venom for linking the mainly neurotoxic effects of the spider venom to a particular molecular target. The transcriptome of the P. depilata venom gland was analyzed to understand the effect of different diets or sex and the impact of these variables on the composition of the venom. We sequenced venom glands obtained from ten males and ten females from three diet treatments: (i) invertebrate: Tenebrio molitor, (ii) vertebrate: Hemidactylus frenatus, and (iii) mixed (T. molitor + H. frenatus). Of 17,354 assembled transcripts from all samples, 65 transcripts relating to venom production differed between males and females. Among them, 36 were classified as neurotoxins, 14 as serine endopeptidases, 11 as other proteins related to venom production, three as metalloprotease toxins, and one as a venom potentiator. There were no differences in transcripts across the analyzed diets, but when considering the effect of diets on differences between the sexes, 59 transcripts were differentially expressed. Our findings provide essential information on toxins differentially expressed that can be related to sex and the plasticity of the diet of P. depilata and thus can be used as a reference for venomics of other wandering spider species.
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Affiliation(s)
- Diego Sierra Ramírez
- Grupo de Investigación Biología y Ecología de Artrópodos (BEA), Facultad de Ciencias, Universidad del Tolima, Altos de Santa Helena, Ibagué 730001, Colombia; (D.S.R.); (J.C.G.-G.)
| | - Juan F. Alzate
- Centro Nacional de Secuenciación Genómica (CNSG), Facultad de Medicina, Universidad de Antioquia, Medellín 050010, Colombia
| | - Yuri Simone
- CIBIO/InBIO/Biopolis, Campus Agrário de Vairão, Rua Padre Armando Quintas 7, 4485-661 Vila do Conde, Portugal; (Y.S.); (A.v.d.M.)
| | - Arie van der Meijden
- CIBIO/InBIO/Biopolis, Campus Agrário de Vairão, Rua Padre Armando Quintas 7, 4485-661 Vila do Conde, Portugal; (Y.S.); (A.v.d.M.)
| | - Giovany Guevara
- Grupo de Investigación en Zoología (GIZ), Facultad de Ciencias, Universidad del Tolima, Altos de Santa Helena, Ibagué 730001, Colombia;
| | - Lida Marcela Franco Pérez
- Facultad de Ciencias Naturales y Matemáticas, Universidad de Ibagué, Carrera 22 Calle 67, Ibagué 730001, Colombia;
| | - Julio César González-Gómez
- Grupo de Investigación Biología y Ecología de Artrópodos (BEA), Facultad de Ciencias, Universidad del Tolima, Altos de Santa Helena, Ibagué 730001, Colombia; (D.S.R.); (J.C.G.-G.)
| | - Carlos F. Prada Quiroga
- Grupo de Investigación Biología y Ecología de Artrópodos (BEA), Facultad de Ciencias, Universidad del Tolima, Altos de Santa Helena, Ibagué 730001, Colombia; (D.S.R.); (J.C.G.-G.)
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A subfraction obtained from the venom of the tarantula Poecilotheria regalis contains inhibitor cystine knot peptides and induces relaxation of rat aorta by inhibiting L-type voltage-gated calcium channels. Toxicon X 2023; 18:100151. [PMID: 36873112 PMCID: PMC9978846 DOI: 10.1016/j.toxcx.2023.100151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Revised: 02/04/2023] [Accepted: 02/06/2023] [Indexed: 02/19/2023] Open
Abstract
Venoms from tarantulas contain low molecular weight vasodilatory compounds whose biological action is conceived as part of the envenomation strategy due to its propagative effects. However, some properties of venom-induced vasodilation do not match those described by such compounds, suggesting that other toxins may cooperate with these ones to produce the observed biological effect. Owing to the distribution and function of voltage-gated ion channels in blood vessels, disulfide-rich peptides isolated from venoms of tarantulas could be conceived into potential vasodilatory compounds. However, only two peptides isolated from spider venoms have been investigated so far. This study describes for the first time a subfraction containing inhibitor cystine knot peptides, PrFr-I, obtained from the venom of the tarantula Poecilotheria regalis. This subfraction induced sustained vasodilation in rat aortic rings independent of vascular endothelium and endothelial ion channels. Furthermore, PrFr-I decreased calcium-induced contraction of rat aortic segments and reduced extracellular calcium influx to chromaffin cells by the blockade of L-type voltage-gated calcium channels. This mechanism was unrelated to the activation of potassium channels from vascular smooth muscle, since vasodilation was not affected in the presence of TEA, and PrFr-I did not modify the conductance of the voltage-gated potassium channel Kv10.1. This work proposes a new envenomating function of peptides from venoms of tarantulas, and establishes a new mechanism for venom-induced vasodilation.
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Key Words
- ACh, acetylcholine
- ADP, adenosine diphosphate
- Cav, voltage-gated calcium channel
- DMEM, Dulbecco's modified eagle's medium
- DRP, disulfide-rich peptide
- EC50, half maximal effective concentration
- Emax, maximum effect
- FBS, fetal bovine serum
- HPLC, high-performance liquid chromatography
- ICK peptide
- ICK, inhibitor cystine knot
- IKCa, intermediate conductance calcium-activated potassium channel
- Kv, voltage-gated potassium channel
- L-type calcium voltage-gated calcium
- LC-MS/MS, liquid chromatography-tandem mass spectrometer
- MALDI, matrix-assisted desorption ionization
- Nav, voltage-gated sodium channel
- Phe, phenylephrine
- Poecilotheria regalis, venom
- RP, reverse phase
- Rat aorta
- SEM, standard error of the mean
- SKCa, small conductance calcium-activated potassium channel
- SNP, sodium nitroprusside
- TEA, tetraethylammonium
- TOF, time of flight
- TRP, transient receptor potential
- Vasodilation
- Vh, holding-voltage
- endothelium-intact (E+), endothelium-denuded (E−)
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Duran LH, Wilson DT, Salih M, Rymer TL. Interactions between physiology and behaviour provide insights into the ecological role of venom in Australian funnel-web spiders: Interspecies comparison. PLoS One 2023; 18:e0285866. [PMID: 37216354 PMCID: PMC10202279 DOI: 10.1371/journal.pone.0285866] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Accepted: 05/03/2023] [Indexed: 05/24/2023] Open
Abstract
Australian funnel-web spiders are iconic species, characterized as being the most venomous spiders in the world. They are also valued for the therapeutics and natural bioinsecticides potentially hidden in their venom molecules. Although numerous biochemical and molecular structural approaches have tried to determine the factors driving venom complexity, these approaches have not considered behaviour, physiology and environmental conditions collectively, which can play a role in the evolution, complexity, and function of venom components in funnel-webs. This study used a novel interdisciplinary approach to understand the relationships between different behaviours (assessed in different ecological contexts) and morphophysiological variables (body condition, heart rate) that may affect venom composition in four species of Australian funnel-web spiders. We tested defensiveness, huddling behaviour, frequency of climbing, and activity for all species in three ecological contexts: i) predation using both indirect (puff of air) and direct (prodding) stimuli; ii) conspecific tolerance; and iii) exploration of a new territory. We also assessed morphophysiological variables and venom composition of all species. For Hadronyche valida, the expression of some venom components was associated with heart rate and defensiveness during the predation context. However, we did not find any associations between behavioural traits and morphophysiological variables in the other species, suggesting that particular associations may be species-specific. When we assessed differences between species, we found that the species separated out based on the venom profiles, while activity and heart rate are likely more affected by individual responses and microhabitat conditions. This study demonstrates how behavioural and morphophysiological traits are correlated with venom composition and contributes to a broader understanding of the function and evolution of venoms in funnel-web spiders.
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Affiliation(s)
- Linda Hernández Duran
- College of Science and Engineering, James Cook University, Cairns, Australia
- Centre for Tropical Environmental and Sustainability Sciences, James Cook University, Cairns, Australia
- Australian Institute for Tropical Health and Medicine, Centre for Molecular Therapeutics, James Cook University, Cairns, Australia
| | - David Thomas Wilson
- Australian Institute for Tropical Health and Medicine, Centre for Molecular Therapeutics, James Cook University, Cairns, Australia
| | - Mohamed Salih
- Department of Obstetrics and Gynaecology, Monash University, Clayton, Victoria, Australia
| | - Tasmin Lee Rymer
- College of Science and Engineering, James Cook University, Cairns, Australia
- Centre for Tropical Environmental and Sustainability Sciences, James Cook University, Cairns, Australia
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Michálek O, Walker AA, Šedo O, Zdráhal Z, King GF, Pekár S. Composition and toxicity of venom produced by araneophagous white-tailed spiders (Lamponidae: Lampona sp.). Sci Rep 2022; 12:21597. [PMID: 36517485 PMCID: PMC9751281 DOI: 10.1038/s41598-022-24694-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Accepted: 11/18/2022] [Indexed: 12/15/2022] Open
Abstract
Prey-specialised spiders are adapted to capture specific prey items, including dangerous prey. The venoms of specialists are often prey-specific and less complex than those of generalists, but their venom composition has not been studied in detail. Here, we investigated the venom of the prey-specialised white-tailed spiders (Lamponidae: Lampona), which utilise specialised morphological and behavioural adaptations to capture spider prey. We analysed the venom composition using proteo-transcriptomics and taxon-specific toxicity using venom bioassays. Our analysis identified 208 putative toxin sequences, comprising 103 peptides < 10 kDa and 105 proteins > 10 kDa. Most peptides belonged to one of two families characterised by scaffolds containing eight or ten cysteine residues. Toxin-like proteins showed similarity to galectins, leucine-rich repeat proteins, trypsins and neprilysins. The venom of Lampona was shown to be more potent against the preferred spider prey than against alternative cricket prey. In contrast, the venom of a related generalist was similarly potent against both prey types. These data provide insights into the molecular adaptations of venoms produced by prey-specialised spiders.
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Affiliation(s)
- Ondřej Michálek
- grid.10267.320000 0001 2194 0956Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37 Brno, Czech Republic
| | - Andrew A. Walker
- grid.1003.20000 0000 9320 7537Institute for Molecular Bioscience, The University of Queensland, St. Lucia, QLD 4072 Australia ,grid.1003.20000 0000 9320 7537Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, St. Lucia, QLD 4072 Australia
| | - Ondrej Šedo
- grid.10267.320000 0001 2194 0956Research Group Proteomics, Mendel Centre for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Kamenice 5, 625 00 Brno, Czech Republic ,grid.10267.320000 0001 2194 0956Faculty of Science, National Centre for Biomolecular Research, Masaryk University, Kamenice 5, 625 00 Brno, Czech Republic
| | - Zbyněk Zdráhal
- grid.10267.320000 0001 2194 0956Research Group Proteomics, Mendel Centre for Plant Genomics and Proteomics, Central European Institute of Technology, Masaryk University, Kamenice 5, 625 00 Brno, Czech Republic ,grid.10267.320000 0001 2194 0956Faculty of Science, National Centre for Biomolecular Research, Masaryk University, Kamenice 5, 625 00 Brno, Czech Republic
| | - Glenn F. King
- grid.1003.20000 0000 9320 7537Institute for Molecular Bioscience, The University of Queensland, St. Lucia, QLD 4072 Australia ,grid.1003.20000 0000 9320 7537Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, St. Lucia, QLD 4072 Australia
| | - Stano Pekár
- grid.10267.320000 0001 2194 0956Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37 Brno, Czech Republic
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Fernandes FF, Moraes JR, Santos JLD, Soares TG, Gouveia VJP, Matavel ACS, Borges WDC, Cordeiro MDN, Figueiredo SG, Borges MH. Comparative venomic profiles of three spiders of the genus Phoneutria. J Venom Anim Toxins Incl Trop Dis 2022; 28:e20210042. [PMID: 35283937 PMCID: PMC8875809 DOI: 10.1590/1678-9199-jvatitd-2021-0042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 07/20/2021] [Indexed: 11/22/2022] Open
Abstract
Background: Spider venoms induce different physio-pharmacological effects by binding
with high affinity on molecular targets, therefore being of biotechnological
interest. Some of these toxins, acting on different types of ion channels,
have been identified in the venom of spiders of the genus
Phoneutria, mainly from P.
nigriventer. In spite of the pharmaceutical potential demonstrated
by P. nigriventer toxins, there is limited information on
molecules from venoms of the same genus, as their toxins remain poorly
characterized. Understanding this diversity and clarifying the differences
in the mechanisms of action of spider toxins is of great importance for
establishing their true biotechnological potential. This prompted us to
compare three different venoms of the Phoneutria genus:
P. nigriventer (Pn-V), P. eickstedtae
(Pe-V) and P. pertyi (Pp-V). Methods: Biochemical and functional comparison of the venoms were carried out by
SDS-PAGE, HPLC, mass spectrometry, enzymatic activities and
electrophysiological assays (whole-cell patch clamp). Results: The employed approach revealed that all three venoms had an overall
similarity in their components, with only minor differences. The presence of
a high number of similar proteins was evident, particularly toxins in the
mass range of ~6.0 kDa. Hyaluronidase and proteolytic activities were
detected in all venoms, in addition to isoforms of the toxins Tx1 and Tx2-6.
All Tx1 isoforms blocked Nav1.6 ion currents, with slight differences. Conclusion: Our findings showed that Pn-V, Pe-V and Pp-V are highly similar concerning
protein composition and enzymatic activities, containing isoforms of the
same toxins sharing high sequence homology, with minor modifications.
However, these structural and functional variations are very important for
venom diversity. In addition, our findings will contribute to the
comprehension of the molecular diversity of the venoms of the other species
from Phoneutria genus, exposing their biotechnological
potential as a source for searching for new active molecules.
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Lüddecke T, Herzig V, von Reumont BM, Vilcinskas A. The biology and evolution of spider venoms. Biol Rev Camb Philos Soc 2021; 97:163-178. [PMID: 34453398 DOI: 10.1111/brv.12793] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Revised: 08/19/2021] [Accepted: 08/20/2021] [Indexed: 12/24/2022]
Abstract
Spiders are diverse, predatory arthropods that have inhabited Earth for around 400 million years. They are well known for their complex venom systems that are used to overpower their prey. Spider venoms contain many proteins and peptides with highly specific and potent activities suitable for biomedical or agrochemical applications, but the key role of venoms as an evolutionary innovation is often overlooked, even though this has enabled spiders to emerge as one of the most successful animal lineages. In this review, we discuss these neglected biological aspects of spider venoms. We focus on the morphology of spider venom systems, their major components, biochemical and chemical plasticity, as well as ecological and evolutionary trends. We argue that the effectiveness of spider venoms is due to their unprecedented complexity, with diverse components working synergistically to increase the overall potency. The analysis of spider venoms is difficult to standardize because they are dynamic systems, fine-tuned and modified by factors such as sex, life-history stage and biological role. Finally, we summarize the mechanisms that drive spider venom evolution and highlight the need for genome-based studies to reconstruct the evolutionary history and physiological networks of spider venom compounds with more certainty.
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Affiliation(s)
- Tim Lüddecke
- Department for Bioresources, Fraunhofer Institute for Molecular Biology and Applied Ecology, Ohlebergsweg 12, Gießen, 35392, Germany.,LOEWE Centre for Translational Biodiversity Genomics (TBG), Senckenberganlage 25, Frankfurt am Main, 60325, Germany
| | - Volker Herzig
- GeneCology Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, 4556, Australia.,School of Science, Technology and Engineering, University of the Sunshine Coast, Sippy Downs, QLD, 4556, Australia
| | - Björn M von Reumont
- LOEWE Centre for Translational Biodiversity Genomics (TBG), Senckenberganlage 25, Frankfurt am Main, 60325, Germany.,Institute for Insect Biotechnology, Justus-Liebig University Giessen, Heinrich-Buff-Ring 26-32, Gießen, 35392, Germany
| | - Andreas Vilcinskas
- Department for Bioresources, Fraunhofer Institute for Molecular Biology and Applied Ecology, Ohlebergsweg 12, Gießen, 35392, Germany.,LOEWE Centre for Translational Biodiversity Genomics (TBG), Senckenberganlage 25, Frankfurt am Main, 60325, Germany.,Institute for Insect Biotechnology, Justus-Liebig University Giessen, Heinrich-Buff-Ring 26-32, Gießen, 35392, Germany
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Saggiomo SL, Firth C, Wilson DT, Seymour J, Miles JJ, Wong Y. The Geographic Distribution, Venom Components, Pathology and Treatments of Stonefish ( Synanceia spp.) Venom. Mar Drugs 2021; 19:md19060302. [PMID: 34073964 PMCID: PMC8225006 DOI: 10.3390/md19060302] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 05/14/2021] [Accepted: 05/18/2021] [Indexed: 12/05/2022] Open
Abstract
Stonefish are regarded as one of the most venomous fish in the world. Research on stonefish venom has chiefly focused on the in vitro and in vivo neurological, cardiovascular, cytotoxic and nociceptive effects of the venom. The last literature review on stonefish venom was published over a decade ago, and much has changed in the field since. In this review, we have generated a global map of the current distribution of all stonefish (Synanceia) species, presented a table of clinical case reports and provided up-to-date information about the development of polyspecific stonefish antivenom. We have also presented an overview of recent advancements in the biomolecular composition of stonefish venom, including the analysis of transcriptomic and proteomic data from Synanceia horrida venom gland. Moreover, this review highlights the need for further research on the composition and properties of stonefish venom, which may reveal novel molecules for drug discovery, development or other novel physiological uses.
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Affiliation(s)
- Silvia L. Saggiomo
- Australian Institute of Tropical Health and Medicine (AITHM), James Cook University, Cairns 4878, Australia; (C.F.); (D.T.W.); (J.S.); (J.J.M.); (Y.W.)
- Centre for Molecular Therapeutics, James Cook University, Cairns 4878, Australia
- Correspondence:
| | - Cadhla Firth
- Australian Institute of Tropical Health and Medicine (AITHM), James Cook University, Cairns 4878, Australia; (C.F.); (D.T.W.); (J.S.); (J.J.M.); (Y.W.)
- Centre for Molecular Therapeutics, James Cook University, Cairns 4878, Australia
| | - David T. Wilson
- Australian Institute of Tropical Health and Medicine (AITHM), James Cook University, Cairns 4878, Australia; (C.F.); (D.T.W.); (J.S.); (J.J.M.); (Y.W.)
- Centre for Molecular Therapeutics, James Cook University, Cairns 4878, Australia
| | - Jamie Seymour
- Australian Institute of Tropical Health and Medicine (AITHM), James Cook University, Cairns 4878, Australia; (C.F.); (D.T.W.); (J.S.); (J.J.M.); (Y.W.)
- Centre for Molecular Therapeutics, James Cook University, Cairns 4878, Australia
| | - John J. Miles
- Australian Institute of Tropical Health and Medicine (AITHM), James Cook University, Cairns 4878, Australia; (C.F.); (D.T.W.); (J.S.); (J.J.M.); (Y.W.)
- Centre for Molecular Therapeutics, James Cook University, Cairns 4878, Australia
- Centre for Tropical Bioinformatics and Molecular Biology, James Cook University, Cairns 4878, Australia
| | - Yide Wong
- Australian Institute of Tropical Health and Medicine (AITHM), James Cook University, Cairns 4878, Australia; (C.F.); (D.T.W.); (J.S.); (J.J.M.); (Y.W.)
- Centre for Molecular Therapeutics, James Cook University, Cairns 4878, Australia
- Centre for Tropical Bioinformatics and Molecular Biology, James Cook University, Cairns 4878, Australia
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