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Robert E, Goonewardene K, El Kanoa I, Hochman O, Nfon C, Ambagala A. Oral Fluids for the Early Detection of Classical Swine Fever in Commercial Level Pig Pens. Viruses 2024; 16:318. [PMID: 38543685 PMCID: PMC10974009 DOI: 10.3390/v16030318] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Revised: 02/15/2024] [Accepted: 02/17/2024] [Indexed: 05/23/2024] Open
Abstract
The early detection of classical swine fever (CSF) remains a key challenge, especially when outbreaks are caused by moderate and low-virulent CSF virus (CSFV) strains. Oral fluid is a reliable and cost-effective sample type that is regularly surveilled for endemic diseases in commercial pig herds in North America. Here, we explored the possibility of utilizing oral fluids for the early detection of CSFV incursions in commercial-size pig pens using two independent experiments. In the first experiment, a seeder pig infected with the moderately-virulent CSFV Pinillos strain was used, and in the second experiment, a seeder pig infected with the highly-virulent CSFV Koslov strain was used. Pen-based oral fluid samples were collected daily and individual samples (whole blood, swabs) every other day. All samples were tested by a CSFV-specific real-time RT-PCR assay. CSFV genomic material was detected in oral fluids on the seventh and fourth day post-introduction of the seeder pig into the pen, in the first and second experiments, respectively. In both experiments, oral fluids tested positive before the contact pigs developed viremia, and with no apparent sick pigs in the pen. These results indicate that pen-based oral fluids are a reliable and convenient sample type for the early detection of CSF, and therefore, can be used to supplement the ongoing CSF surveillance activities in North America.
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Affiliation(s)
- Erin Robert
- Canadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, MB R3E 3M4, Canada; (E.R.); (K.G.); (I.E.K.); (O.H.); (C.N.)
- Department of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, MB R3E 0W2, Canada
| | - Kalhari Goonewardene
- Canadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, MB R3E 3M4, Canada; (E.R.); (K.G.); (I.E.K.); (O.H.); (C.N.)
| | - Ian El Kanoa
- Canadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, MB R3E 3M4, Canada; (E.R.); (K.G.); (I.E.K.); (O.H.); (C.N.)
| | - Orie Hochman
- Canadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, MB R3E 3M4, Canada; (E.R.); (K.G.); (I.E.K.); (O.H.); (C.N.)
| | - Charles Nfon
- Canadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, MB R3E 3M4, Canada; (E.R.); (K.G.); (I.E.K.); (O.H.); (C.N.)
| | - Aruna Ambagala
- Canadian Food Inspection Agency, National Centre for Foreign Animal Disease, Winnipeg, MB R3E 3M4, Canada; (E.R.); (K.G.); (I.E.K.); (O.H.); (C.N.)
- Department of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, MB R3E 0W2, Canada
- Department of Animal Science, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
- Department of Comparative Biology and Experimental Medicine, Faculty of Veterinary Medicine, University of Calgary, Calgary, AB T2N 4Z6, Canada
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Lebret A, Normand V, Berton P, Nicolazo T, Teixeira Costa C, Chevance C, Brissonnier M, Boulbria G. Alternative Samples for Porcine Reproductive and Respiratory Syndrome Surveillance in an Endemic PRRSV-1-Infected Breeding Herd: A Descriptive Study. Vet Sci 2023; 10:558. [PMID: 37756080 PMCID: PMC10537479 DOI: 10.3390/vetsci10090558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Revised: 08/28/2023] [Accepted: 09/01/2023] [Indexed: 09/28/2023] Open
Abstract
Knowing porcine reproductive and respiratory syndrome (PRRS) status is essential for designing herd management protocols. For this, weaning-age pigs are a key subpopulation. Recently, different alternatives to blood sampling have been introduced because they are easier, welfare-friendly and cost-saving tools. Moreover, most of them allow the testing of more animals and seem to be more sensitive in low-prevalence scenarios. However, these studies were implemented mainly in PRRSV-2-infected herds. The first objective of our study was to compare the rate of detection of PRRSV-1 by RT-qPCR in individual serum samples, family oral fluid samples (FOF) and udder wipes (UW) collected the day before weaning. The second objective was to evaluate the suitability of pooling. The study was performed on a 210-sow farrow-to-finish farm which was PRRSV-1 infected and unstable. A total of 119 litters were sampled. The rate of detection of PRRSV-1 in blood samples, FOF and UW was 10.9%, 7.6% and 0.8%, respectively. The agreement between sera and FOF was almost perfect even if the detection capacity of sera was numerically superior to FOF. The Ct values of positive sera were statistically lower than those of FOF. Two modalities of pooling (1:3 and 1:5) were tested for sera and FOF. For sera, both modalities did not impact the PRRSV-1 status either at the litter level or at the batch one. On the other hand, whatever the modality (pooled by 3 or 5), most of the pools of FOF gave negative results, misclassifying many litters and batches.
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Affiliation(s)
- Arnaud Lebret
- Porc.Spective Swine Vet Practice, ZA de Gohélève, 56920 Noyal-Pontivy, France
- Rezoolution Pig Consulting Services, ZA de Gohélève, 56920 Noyal-Pontivy, France
| | - Valérie Normand
- Porc.Spective Swine Vet Practice, ZA de Gohélève, 56920 Noyal-Pontivy, France
- Rezoolution Pig Consulting Services, ZA de Gohélève, 56920 Noyal-Pontivy, France
| | - Pauline Berton
- Porc.Spective Swine Vet Practice, ZA de Gohélève, 56920 Noyal-Pontivy, France
| | - Théo Nicolazo
- Rezoolution Pig Consulting Services, ZA de Gohélève, 56920 Noyal-Pontivy, France
| | | | - Céline Chevance
- Porc.Spective Swine Vet Practice, ZA de Gohélève, 56920 Noyal-Pontivy, France
- Rezoolution Pig Consulting Services, ZA de Gohélève, 56920 Noyal-Pontivy, France
| | - Mathieu Brissonnier
- Porc.Spective Swine Vet Practice, ZA de Gohélève, 56920 Noyal-Pontivy, France
| | - Gwenaël Boulbria
- Porc.Spective Swine Vet Practice, ZA de Gohélève, 56920 Noyal-Pontivy, France
- Rezoolution Pig Consulting Services, ZA de Gohélève, 56920 Noyal-Pontivy, France
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Osemeke OH, VanKley N, LeFevre C, Peterson C, Linhares DCL. Evaluating oral swab samples for PRRSV surveillance in weaning-age pigs under field conditions. Front Vet Sci 2023; 10:1072682. [PMID: 36876004 PMCID: PMC9976936 DOI: 10.3389/fvets.2023.1072682] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Accepted: 01/16/2023] [Indexed: 02/05/2023] Open
Abstract
Introduction The use of serum and family oral fluids for porcine reproductive and respiratory syndrome virus (PRRSV) surveillance in weaning-age pigs has been previously characterized. Characterizing more sample types similarly offers veterinarians and producers additional validated sample options for PRRSV surveillance in this subpopulation of pigs. Oral swab sampling is relatively easy and convenient; however, there is sparse information on how it compares to the reference sample type for PRRSV surveillance under field conditions. Therefore, this study's objective was to compare the PRRSV reverse-transcription real-time polymerase chain reaction (RT-rtPCR) test outcomes of oral swabs (OS) and sera samples obtained from weaning-age pig litters. Method At an eligible breeding herd, six hundred twenty-three weaning-age piglets from 51 litters were each sampled for serum and OS and tested for PRRSV RNA by RT-rtPCR. Results and Discussion PRRSV RT-rtPCR positivity rate was higher in serum samples (24 of 51 litters, 83 of 623 pigs, with a mean cycle threshold (Ct) value of RT-rtPCR-positive samples per litter ranging from 18.9 to 32.0) compared to OS samples (15 of 51 litters, 33 of 623 pigs, with a mean Ct of RT-rtPCR positive samples per litter ranging from 28.2 to 36.9); this highlights the importance of interpreting negative RT-rtPCR results from OS samples with caution. Every litter with a positive PRRSV RT-rtPCR OS had at least one viremic piglet, highlighting the authenticity of positive PRRSV RT-rtPCR tests using OS; in other words, there was no evidence of environmental PRRSV RNA being detected in OS. Cohen's kappa analysis (Ck = 0.638) indicated a substantial agreement between both sample types for identifying the true PRRSV status of weaning-age pigs.
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Affiliation(s)
| | - Nathan VanKley
- College of Veterinary Medicine, Michigan State University, Lansing, MI, United States
| | - Claire LeFevre
- Carthage Veterinary Service, Carthage, IL, United States
| | - Christina Peterson
- Fieldepi, Iowa State University College of Veterinary Medicine, Ames, IA, United States
| | - Daniel C L Linhares
- Fieldepi, Iowa State University College of Veterinary Medicine, Ames, IA, United States
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Effect of pooling family oral fluids on the probability of PRRSV RNA detection by RT-rtPCR. Prev Vet Med 2022; 206:105701. [DOI: 10.1016/j.prevetmed.2022.105701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Revised: 06/18/2022] [Accepted: 06/26/2022] [Indexed: 11/20/2022]
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Henao-Diaz A, Giménez-Lirola L, Baum DH, Zimmerman J. Guidelines for oral fluid-based surveillance of viral pathogens in swine. Porcine Health Manag 2020; 6:28. [PMID: 33082999 PMCID: PMC7569198 DOI: 10.1186/s40813-020-00168-w] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Accepted: 08/26/2020] [Indexed: 12/18/2022] Open
Abstract
Recent decades have seen both rapid growth and extensive consolidation in swine production. As a collateral effect, these changes have exacerbated the circulation of viruses and challenged our ability to prevent, control, and/or eliminate impactful swine diseases. Recent pandemic events in human and animal health, e.g., SARS-CoV-2 and African swine fever virus, highlight the fact that clinical observations are too slow and inaccurate to form the basis for effective health management decisions: systematic processes that provide timely, reliable data are required. Oral fluid-based surveillance reflects the adaptation of conventional testing methods to an alternative diagnostic specimen. The routine use of oral fluids in commercial farms for PRRSV and PCV2 surveillance was first proposed in 2008 as an efficient and practical improvement on individual pig sampling. Subsequent research expanded on this initial report to include the detection of ≥23 swine viral pathogens and the implementation of oral fluid-based surveillance in large swine populations (> 12,000 pigs). Herein we compile the current information regarding oral fluid collection methods, testing, and surveillance applications in swine production.
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Affiliation(s)
- Alexandra Henao-Diaz
- Department of Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine, Veterinary Medical Research Institute, Iowa State University, Ames, Iowa 50011 USA
| | - Luis Giménez-Lirola
- Department of Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine, Veterinary Medical Research Institute, Iowa State University, Ames, Iowa 50011 USA
| | - David H Baum
- Department of Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine, Veterinary Medical Research Institute, Iowa State University, Ames, Iowa 50011 USA
| | - Jeffrey Zimmerman
- Department of Veterinary Diagnostic and Production Animal Medicine, College of Veterinary Medicine, Veterinary Medical Research Institute, Iowa State University, Ames, Iowa 50011 USA
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