Characterization of microbial trophic structures of two anaerobic bioreactors processing sulfate-rich waste streams

Variations in the substrate composition and microbial community structure in the anaerobic fermentation process using the green algae Enteromorpha prolifera

Enteromorpha prolifera is a nutrient-rich green alga and abound in the Yellow Sea and the Bohai Sea of China. In this study, E. prolifera was anaerobically digested for biogas production. The variations of chemical compositions and microbial community structure as well as the physical structure of E. prolifera in anaerobic digestion process were investigated. This is the first report of multiple ways to deeply analysis the process of E. prolifera anaerobic digestion. Results from the present work showed that the biogas obtained from E. prolifera anaerobic digestion could achieve 409.7 mL•g− 1 TS with an average methane concentration of 53.2%, and the VFAs content in substrate played a vital role for driving the biogas production of flora. Moreover, S1 of Thermotogaceae and Cenarchaeum, the dominant bacteria and archaea in digestion flora, respectively, played important roles in degrading E. prolifera, acidizing slurry, and providing methanogenic substrate for methanogens.

Graphical Abstract

Obstacles faced by methanogenic archaea originating from substrate-driven toxicants in anaerobic digestion

Anaerobic digestion (AD) is used to treat waste and produce bioenergy. However, toxicants, which originate from the substrate, can inhibit or damage the digestion process. Methanogenic archaea (MA), which are the executor in the methanogenesis stage, are more sensitive than bacteria to these toxicants. This review discusses the effects of substrate-driven toxicants, namely, antibiotics, H₂S and sulfate, heavy metals (HMs), long-chain fatty acids (LCFAs), and ammonia nitrogen, on the activity of MAs, methanogenic pathways, and the inter-genus succession of MAs. The adverse effects of these five toxicants on MA include effects on pH, damages to cell membranes, the prevention of protein synthesis, changes in hydrogen partial pressure, a reduction in the bioavailability of trace elements, and hindrance of mass transfer. These effects cause a reduction in MA activity and the succession of MAs and methanogenic pathways, which affect AD performance. Under the stress of these toxicants, succession occurs among HA (hydrogenotrophic methanogen), AA (acetoclastic methanogen), and MM (methylotrophic methanogen), especially HA gradually replaces AA as the dominant MA. Simultaneously, the dominant methanogenic pathway also changes from the aceticlastic pathway to other methanogenic pathways. A comprehensive understanding of the impact of toxicants on MA permits more specific targeting when developing strategies to mitigate or eliminate the effects of these toxicants.

Chaperone co-inducer BGP-15 mitigates early contractile dysfunction of the soleus muscle in a rat ICU model

Aim

Critical illness myopathy (CIM) represents a common consequence of modern intensive care, negatively impacting patient health and significantly increasing health care costs; however, there is no treatment available apart from symptomatic and supportive interventions. The chaperone co‐inducer BGP‐15 has previously been shown to have a positive effect on the diaphragm in rats exposed to the intensive care unit (ICU) condition. In this study, we aim to explore the effects of BGP‐15 on a limb muscle (soleus muscle) in response to the ICU condition.

Methods

Sprague‐Dawley rats were subjected to the ICU condition for 5, 8 and 10 days and compared with untreated sham‐operated controls.

Results

BGP‐15 significantly improved soleus muscle fibre force after 5 days exposure to the ICU condition. This improvement was associated with the protection of myosin from post‐translational myosin modifications, improved mitochondrial structure/biogenesis and reduced the expression of MuRF1 and Fbxo31 E3 ligases. At longer durations (8 and 10 days), BGP‐15 had no protective effect when the hallmark of CIM had become manifest, that is, preferential loss of myosin. Unrelated to the effects on skeletal muscle, BGP‐15 had a strong positive effect on survival compared with untreated animals.

Conclusions

BGP‐15 treatment improved soleus muscle fibre and motor protein function after 5 days exposure to the ICU condition, but not at longer durations (8 and 10 days) when the preferential loss of myosin was manifest. Thus, long‐term CIM interventions targeting limb muscle fibre/myosin force generation capacity need to consider both the post‐translational modifications and the loss of myosin.

Sulfate reducing bacteria-based wastewater treatment system integrated with sulfide fuel cell for simultaneous wastewater treatment and electricity generation

This study aimed to design a sulfate-reducing bacteria (SRB)-based wastewater treatment system (SWTS) integrated with a sulfide fuel cell (SFC) as an alternative to the energy-intensive aerobic wastewater treatment process. The result showed that the COD/sulfate ratio and hydraulic retention time (HRT) were two important parameters in a SWTS. The highest COD and sulfate removal efficiency rates were at a HRT of 4 h at a COD/sulfate ratio of 0.67, reaching 83 ± 0.2% and 84 ± 0.4% with sulfate removal rates of 4.087 ± 32 mg SO₄^2-/d, respectively. A microbial analysis revealed that the dominance of nine OTUs belonging to SRB closely affected the high sulfate removal efficiency in the SWTS. At the HRT of 8 h, voltage of 0.02 V and a power density level of 130 mW/m² were obtained with sulfide removal efficiency of 99 ± 0.5%. These results overall demonstrate that SRB can serve as a green and effective route for wastewater treatment.

A gradual change between methanogenesis and sulfidogenesis during a long-term UASB treatment of sulfate-rich chemical wastewater

The competition between methane-producing archaea and sulfate-reducing bacteria is an important topic in anaerobic wastewater treatment. In this study, an Up-flow Anaerobic Sludge Blanket Reactor (UASB) was operated for 330 days to evaluate the treatment performance of sulfate-rich wastewater. The effects of competition change between methane production and sulfate reduction on the organic removal efficiency, methane production, and electrons allocation were investigated. Synthetic wastewater was composed of ethanol and acetate with a chemical oxygen demand (COD)/SO₄^2- of 1.0. As a result, the COD removal efficiency achieved in long-term treatment was higher than 90%. During the initial stage, methane production was the dominant reaction. Sulfate-reducing bacteria (SRB) could only partially oxidize ethanol to acetate, and methane-producing archaea (MPA) utilized acetate for methane production. Methane production declined gradually over the long-term operation, whereas the sulfate-reducing efficiency increased. However, UASB performed well throughout the experiment because there was no significant inhibition. After the complete reduction of the sulfate, MPA converted the remaining COD into methane.

Performance of CSTR-EGSB-SBR system for treating sulfate-rich cellulosic ethanol wastewater and microbial community analysis

Performance and microbial community composition were evaluated in a two-phase anaerobic and aerobic system treating sulfate-rich cellulosic ethanol wastewater (CEW). The system was operated at five different chemical oxygen demand (COD)/SO₄^2- ratios (63.8, 26.3, 17.8, 13.7, and 10.7). Stable performance was obtained for total COD removal efficiency (94.5%), sulfate removal (89.3%), and methane production rate (11.5 L/day) at an organic loading rate of 32.4 kg COD/(m³·day). The acidogenic reactor made a positive contribution to net VFAs production (2318.1 mg/L) and sulfate removal (60.9%). Acidogenic bacteria (Megasphaera, Parabacteroides, unclassified Ruminococcaceae spp., and Prevotella) and sulfate-reducing bacteria (Butyrivibrio, Megasphaera) were rich in the acidogenic reactor. In the methanogenic reactor, high diversity of microorganisms corresponded with a COD removal contribution of 83.2%. Moreover, methanogens (Methanosaeta) were predominant, suggesting that these organisms played an important role in the acetotrophic methanogenesis pathway. The dominant aerobic bacteria (Truepera) appeared to have been responsible for the COD removal of the SBR. These results indicate that dividing the sulfate reduction process could effectively minimize sulfide toxicity, which is important for the successful operation of system treating sulfate-rich CEW.

Latitudinal distribution of microbial communities in anaerobic biological stabilization ponds: effect of the mean annual temperature

Considering wide utilization and high methane fluxes from anaerobic biological stabilization ponds (ABSPs), understanding the methanogenesis in ABSPs is of fundamental importance. Here we investigated the variation and impact factors of methanogenesis in seven ABSPs that spanned from the north to the south of China. Results showed that methanogen abundance (7.7 × 10⁹ -8.7 × 10¹⁰  copies g^-1 dry sediment) and methanogenic activities (2.2-21.2 μmol CH₄  g^-1  dry sediment h^-1 ) were considerable for all sediments. Statistical analysis demonstrated that compared with other factors (ammonium, pH, COD and TOC), mean annual temperature (MAT) showed the lowest P value and thus was the most important influencing factor for the methanogenic process. Besides, with the increasing MAT, methanogenic activity was enhanced mainly due to the shift of the dominant methanogenic pathway from acetoclastic (49.8-70.7%) in low MAT areas to hydrogenotrophic (42.0-54.6%) in high MAT areas. This shift of methanogenic pathway was also paralleled with changes in composition of bacterial communities. These results suggested that future global warming may reshape the composition of methanogen communities and lead to an increasing methane emission from ABSPs. Therefore, further research is urgently needed to globally estimate methane emissions from ABSPs and re-examine the role of ABSPs in wastewater treatment.

Anaerobic digestion of sulfate-acidified cattle slurry: One-stage vs. two-stage

Two strategies to include acidified cattle manure (AcCM) in co-digestion with normal cattle manure (CM) are presented in this work. The strategies are a single thermophilic (50 °C) continuous stirred tank reactor (CSTR) anaerobic digestion and a two-step (65 °C + 50 °C) CSTR process. In both strategies, two different inclusion levels of H2SO4-acidified CM (10% and 20%) in co-digestion with normal CM were tested and compared with a control CSTR fed only CM. Important enhancement of methane (CH4) yield and solid reductions were observed in the thermophilic one-step CSTR working with 10% AcCM. However, a higher inclusion level of AcCM (20%) caused volatile fatty acid accumulation in the reactor and a more than 30% reduction in CH4 production. In terms of CH4 production, when 10% of AcCM was co-digested with 90% of CM, the two-step anaerobic co-digestion yielded less than the single step. During the first step of the two-step CSTR process, acidogenesis and a partial sulfate reduction were achieved. However, sulfide stripping between the first and the second step must be promoted in order to advance this technology.

Zero valent iron simultaneously enhances methane production and sulfate reduction in anaerobic granular sludge reactors

Zero valent iron (ZVI) packed anaerobic granular sludge reactors have been developed for improved anaerobic wastewater treatment. In this work, a mathematical model is developed to describe the enhanced methane production and sulfate reduction in anaerobic granular sludge reactors with the addition of ZVI. The model is successfully calibrated and validated using long-term experimental data sets from two independent ZVI-enhanced anaerobic granular sludge reactors with different operational conditions. The model satisfactorily describes the chemical oxygen demand (COD) removal, sulfate reduction and methane production data from both systems. Results show ZVI directly promotes propionate degradation and methanogenesis to enhance methane production. Simultaneously, ZVI alleviates the inhibition of un-dissociated H2S on acetogens, methanogens and sulfate reducing bacteria (SRB) through buffering pH (Fe(0) + 2H(+) = Fe(2+) + H2) and iron sulfide precipitation, which improve the sulfate reduction capacity, especially under deterioration conditions. In addition, the enhancement of ZVI on methane production and sulfate reduction occurs mainly at relatively low COD/ [Formula: see text] ratio (e.g., 2-4.5) rather than high COD/ [Formula: see text] ratio (e.g., 16.7) compared to the reactor without ZVI addition. The model proposed in this work is expected to provide support for further development of a more efficient ZVI-based anaerobic granular system.

Diversity Profile of Microbes Associated with Anaerobic Sulfur Oxidation in an Upflow Anaerobic Sludge Blanket Reactor Treating Municipal Sewage

We herein analyzed the diversity of microbes involved in anaerobic sulfur oxidation in an upflow anaerobic sludge blanket (UASB) reactor used for treating municipal sewage under low-temperature conditions. Anaerobic sulfur oxidation occurred in the absence of oxygen, with nitrite and nitrate as electron acceptors; however, reactor performance parameters demonstrated that anaerobic conditions were maintained. In order to gain insights into the underlying basis of anaerobic sulfur oxidation, the microbial diversity that exists in the UASB sludge was analyzed comprehensively to determine their identities and contribution to sulfur oxidation. Sludge samples were collected from the UASB reactor over a period of 2 years and used for bacterial 16S rRNA gene-based terminal restriction fragment length polymorphism (T-RFLP) and next-generation sequencing analyses. T-RFLP and sequencing results both showed that microbial community patterns changed markedly from day 537 onwards. Bacteria belonging to the genus Desulforhabdus within the phylum Proteobacteria and uncultured bacteria within the phylum Fusobacteria were the main groups observed during the period of anaerobic sulfur oxidation. Their abundance correlated with temperature, suggesting that these bacterial groups played roles in anaerobic sulfur oxidation in UASB reactors.

Effect of sulfate and lactate loading rates on the respiration process and microbial population changes measured by ecological indices

In a sulfate reducing process, increasing loading rates and sulfide accumulation may induce population changes resulting in decreasing effectiveness of the process. Thus, the relationship between microbial metabolism changes and population dynamics was studied. An upflow anaerobic sludge blanket reactor was operated at different sulfate loading rates (SLR), from 290 to 981 mg SO4-S/L d at a constant carbon/sulfur ratio of 0.75. When the SLR was increased, the total organic carbon and sulfate consumption efficiencies decreased to nearly 30% and 25%, respectively. The acetate and propionate yields increased with increasing SLR and 385±7 mg sulfide-S/L d was reached. The ecological indices, determined by random amplified polymorphic DNA and denaturing gradient gel electrophoresis techniques, diversity and evenness were found to be constant, and similarity coefficient values remained higher than 76%. The results suggest that the microbial population changes were negligible compared with metabolic changes when SLR was increased. The sulfide accumulation did not modify the microbial diversity. The sequencing of 16S rRNA genes showed strains related to sulfate reducing, fermentation, and methanogenesis processes. The results indicated that the decreasing of effectiveness, under the experimental conditions tested, was dependent more on operational parameters than microbial changes.

Impact of abrupt temperature increase on the performance of an anaerobic hybrid bioreactor and its intrinsic microbial community

This study aimed to analyse the effect of sudden temperature increases (in the range of 45-65 °C) on the performance and the microbial community structure of a hybrid anaerobic reactor. The reactor recovered with time after every temperature shock up to the operating temperature of 55 °C. At 55 °C, a 10 °C shock resulting in an operating temperature of 65 °C, deteriorated the reactor's performance. At this condition, both, the diversity and the relative abundance of methanogenic groups, especially of Methanosaetaceae, were significantly affected as observed by DGGE fingerprinting and quantitative PCR. In contrast, at lower temperatures (i.e., 45 and 55 °C), thermal shocks seemed to have less effect due to the presence and maintenance of thermophilic strains, which prevented system deterioration. At 65 °C, the absence of any acetoclastic methanogen is assumed to be the cause of system failure.

Towards a hybrid anaerobic digester-microbial fuel cell integrated energy recovery system: an overview of the development of an electrogenic biofilm

An electrogenic biofilm was developed on a macroporous chitosan-carbon nanotube (CHIT-CNT) electrode under constant poised potential (-0.25V versus Ag/AgCl reference electrode) and flow through conditions utilizing the effluent of an anaerobic digester as both the inoculant and substrate for the electrogenic biofilm. After 125 days of inoculation the bioelectrode demonstrated an open circuit potential of -0.62V and a current density of 9.43μAcm(-3) (at -0.25V). Scanning electron microscopy images indicate thorough surface coverage of the biofilm with a high density of bacterial nanowires physically connecting bacteria to bacteria and bacteria to carbon nanotube (electrode surface) suggesting the nanowires are electrically conductive. DGGE was used to identify the major bacterial and archaeal populations.

Process performance of anaerobic co-digestion of raw and acidified pig slurry

The effect of incorporating different ratios of acidified pig slurry on methane yield was evaluated in two scales of anaerobic digesters: Thermophilic (50 °C) pilot scale digester (120 l), operating with an average hydraulic retention time of 20 days and thermophilic (52 °C) full-scale digesters (10 and 30 m(3)), operating with an average hydraulic retention time of 30 days. In the lab-scale digester, different inclusion levels of acidified slurry (0-60%) were tested each 15 days, to determine the maximum ratio of acidified to non-acidified slurry causing inhibition and to find process state indicators helping to prevent process failure. In the full-scale digesters, the level of inclusion of the acidified slurry was chosen from the ratio causing methane inhibition in the pilot scale experiment and was carried on in a long-term process of 100 days. The optimal inclusion level of acidified pig slurry in anaerobic co-digestion with conventional slurry was 10%, which promoted anaerobic methane yield by nearly 20%. Higher inclusion levels caused methane inhibition and volatile fatty acids accumulations in both experiments. In order to prevent process failure, the most important traits to monitor in the anaerobic digestion of acidified pig slurry were found to be: sulfate content of the slurry, alkalinity parameters (especially partial alkalinity and the ratio of alkalinity) and total volatile fatty acids (especially acetic and butyric acids).

Implications of volatile fatty acid profile on the metabolic pathway during continuous sulfate reduction

Volatile fatty acid (VFA) profile is an important parameter in anaerobic reactors because it enables the assessment of metabolic pathways. Volatile fatty acids were monitored during sulfate reduction in a UASB (upflow anaerobic sludge blanket) reactor treating 2g/L sulfate concentration and with the organic loading increasing from 3.5 kg COD/m(3)d to 5.9 kg COD/m(3)d, for a 1-day residence time. In the absence of recirculation, the best outcome (65% reduction) was noticed with the lowest organic loading (3.55 kg/m(3)d). When recirculation was applied, sulfate reduction yields increased to 89%, corresponding to a sulfate removal rate of 1.94 kg SO(4)(2-)/m(3)d. The reactor performance was discussed in relation to microbial diversity and metabolic pathways. At high organic loading, two metabolic pathways account for lactate degradation: (i) lactate is oxidized to acetate and carbon dioxide by the incomplete-oxidizer SRB (sulfate-reducing bacteria) Desulfomonas, Desulfovibrio, Desulfolobus, Desulfobulbus and Desulfotomaculum spp.; (ii) lactate is converted to acetate by fermenting bacteria such as Clostridium sp. High propionate concentrations imply that there are low sulfate reduction efficiencies.

Performance of a sulfidogenic bioreactor and bacterial community shifts under different alkalinity levels

The performance of a sulfidogenic bioreactor and the response of bacterial populations to influent alkalinity changes were investigated. The bioreactor reached 40% of sulfate removal efficiency (SRE) with 0 mg l(-1) of alkalinity, and single-stranded conformation polymorphism profiles showed that some members of Bacteroides, Dysgonomonas, Sporobacter, Quinella, and Citrobacter became dominant populations. 16S rRNA gene library analysis indicated that the Actinobacteria group increased from 0% in seed to 23% in sludge. An increase in alkalinity to 1300 mg l(-1) led to a rapid increase of SRE to 65% and changes in the bacterial community. Sequences representing Dysgonomonas, Raoultella, Kluyvera, and Phascolarctobacterium were now found. When alkalinity was deceased to 0 mg l(-1), SRE dropped and the bands representing Raoultella, Kluyvera, and Phascolarctobacterium disappeared, while bands representing Clostridium appeared. A second cycle of low/high alkalinity did not result in obvious changes to the bacterial community. These results indicate that the sulfidogenic bioreactor favored higher influent alkalinity and that the different functional microbial populations responded well to the alkalinity changes.