Biological treatment of propanil and 3,4-dichloroaniline: kinetic and microbiological characterisation

Self-purification of actual wastewater via microbial-synergy driving of catalyst-surface microelectronic field: A pilot-scale study

High energy consumption is impedimental for eliminating refractory organics in wastewater by current technologies. Herein, we develop an efficient self-purification process for actual non-biodegradable dyeing wastewater at pilot scale, using N-doped graphene-like (CN) complexed Cu-Al₂O₃ supported Al₂O₃ ceramics (HCLL-S8-M) fixed-bed reactor without additional input. About 36% chemical oxygen demand removal was achieved within 20 min empty bed retention time and maintained stability for almost one year. The HCLL-S8-M structure feature and its interface on microbial community structure, functions, and metabolic pathways were analyzed by density-functional theory calculation, X-ray photoelectron spectroscopy, multiomics analysis of metagenome, macrotranscriptome and macroproteome. On the surface of HCLL-S8-M, a strong microelectronic field (MEF) was formed by the electron-rich/poor area due to Cu-π interaction from the complexation between phenolic hydroxy of CN and Cu species, driving the electrons of the adsorbed dye pollutants to the microorganisms through extracellular polymeric substance and the direct transfer of extracellular electrons, causing their degradation into CO₂ and intermediates, which was degraded partly via intracellular metabolism. The lower energy feeding for the microbiome produced less adenosine triphosphate, resulting in little sludge throughout reaction. The MEF from electronic polarization is greatly potential to develop low-energy wastewater treatment technology.

A synergistic platform enables co-oxidation of halogenated organic pollutants without input of organic primary substrate

While co-oxidation is widely used to biodegrade halogenated organic pollutants (HOPs), a considerable amount of organic primary substrate is required. Adding organic primary substrates increases the operating cost and also leads to extra carbon dioxide release. In this study, we evaluated a two-stage Reduction and Oxidation Synergistic Platform (ROSP), which integrated catalytic reductive dehalogenation with biological co-oxidation for HOPs removal. The ROSP was a combination of an H₂-based membrane catalytic-film reactor (H_2-MCfR) and an O₂-based membrane biofilm reactor (O_2-MBfR). 4-chlorophenol (4-CP) was used as a model HOP to evaluate the performance of ROSP. In the MCfR stage, zero-valent palladium nanoparticles (Pd⁰NPs) catalyzed reductive hydrodechlorination that converted 4-CP to phenol, with a conversion yield over 92%. In the MBfR stage, the phenol was oxidized and used as a primary substrate that supported the co-oxidation of residual 4-CP. Genomic DNA sequencing revealed that phenol produced from 4-CP reduction enriched bacteria having genes for functional enzymes for phenol biodegradation in the biofilm community. In the ROSP, over 99% of 60 mg/L 4-CP was removed and mineralized during continuous operation: Effluent 4-CP and chemical oxygen demand concentrations were below 0.1 and 3 mg/L, respectively. H₂ was the only added electron donor to the ROSP, which means no extra carbon dioxide was produced by primary-substrate oxidation.

Wide substrate range for a candidate bioremediation enzyme isolated from Nocardioides sp. strain SG-4 G

Narrow substrate ranges can impact heavily on the range of applications and hence commercial viability of candidate bioremediation enzymes. Here we show that an ester hydrolase from Nocardioides strain SG-4 G has potential as a bioremediation agent against various pollutants that can be detoxified by hydrolytic cleavage of some carboxylester, carbamate, or amide linkages. Previously we showed that a radiation-killed, freeze-dried preparation (ZimA) of this strain can rapidly degrade the benzimidazole fungicide carbendazim due to the activity of a specific ester hydrolase, MheI. Here, we report that ZimA also has substantial hydrolytic activity against phthalate diesters (dimethyl, dibutyl, and dioctyl phthalate), anilide (propanil and monalide), and carbamate ester (chlorpropham) herbicides under laboratory conditions. The reaction products are substantially less toxic, or inactive as herbicides, than the parent compounds. Tests of strain SG-4 G and Escherichia coli expressing MheI found they were also able to hydrolyse dimethyl phthalate, propanil, and chlorpropham, indicating that MheI is principally responsible for the above activities.

Enantioselectivity and mechanisms of chiral herbicide biodegradation in hydroponic systems

This study demonstrates the enantioselective removal dynamics and mechanisms of the chiral herbicide metolachlor in a hydroponic system of Phragmites australis. It presents the first work to elucidate plant-microbial driven enantioselective degradation processes of chiral chemicals. The results showed a degradation efficiency of up to 95.07 ± 2.81% in the hydroponic system driven by a notably high degradation rate constant of 0.086 d^-1. P. australis was demonstrated to rapidly increase the contribution of biodegradation pathways in the hydroponic system to 82.21 ± 4.81% within 4 d with an enantiomeric fraction (EF) drop to 0.26 ± 0.02 to favour the enantioselective degradation of S-Metolachlor (k_{S-Metolachlor} = 0.568 d^-1 and k_{R-Metolachlor} = 0.147 d^-1). Comparatively, the biodegradation pathways in the control constituted less than 25%, with an EF value of circa 0.5. However, the enantioselective biodegradation pathways exhibited complete reversal after about 4 d to favour R-Metolachlor. Plants promoted the degradation of R-Metolachlor, evidenced by an increase in EF to 0.59 ± 0.03. Nonetheless, metolachlor showed an inhibitory effect on plants reflected by the reduction of plant growth rate, chlorophyll content, and electron transport rate to -7.85 ± 1.52%, 1.33 ± 0.43 mg g^-1, 4.03 ± 1.33 μmol (m² s)^-1, respectively. However, rhizosphere microorganisms aided plants to catalyze excessive reactive oxygen species production by the antioxidant enzymes to protect plants from oxidative damage and restore their physiological activities. High-throughput analysis of microbial communities demonstrated the enrichment of Massilia (40.63%) and Pseudomonas (8.16%) in the initial stage to promote the rapid degradation of S-Metolachlor. By contrast, the proliferation of Brevundimonas (32.29%) and Pseudarthrobacter (11.03%) in the terminal stage was closely associated with the degradation of R-Metolachlor. Moreover, as symbiotic bacteria of plants, these bacteria aided plants protection from reactive oxygen damages and promoted the recovery of plant metabolic functions and photosynthesis. Overall, these results demonstrate biodegradation mediated by plant-microbe mechanisms as the main driver for the enantioselective degradation of metolachlor in hydroponic systems.

Ethylmalonyl-CoA pathway involved in polyhydroxyvalerate synthesis in Candidatus Contendobacter

Here a stable glycogen accumulating organisms (GAOs) system was operated by anaerobic–aerobic mode in the sequencing batch reactor. We focused on the metabolic mechanisms of PHAs storage from GAOs. Our system showed the classic characteristic of glycogen accumulating metabolism (GAM). Glycogen consumption was followed by acetic acid uptake to synthesize poly-β-hydroxyalkanoates (PHAs) during the anaerobic period, and glycogen was synthesized by PHAs degradation in the aerobic stage. Microbial community structure indicated that Candidatus Contendobacter was the most prevalent GAOs. We found that the ethylmalonyl-CoA (EMC) pathway was the crucial pathway supplying the core substance propionyl-CoA for poly-β-hydroxyvalerate (PHV) synthesis in Candidatus Contendobacter. All genes in EMC pathway were mainly located in Candidatus Contendobacter by gene source analysis. The key genes expression of EMC pathway increased with Candidatus Contendobacter enrichment, further validating that propionyl-CoA was synthesized by Candidatus Contendobacter predominantly via EMC pathway. Our work revealed the novel mechanisms underlying PHV synthesis through EMC pathway and further improved the intercellular storage metabolism of GAOs.

We observed GAM characteristic in the GAOs enrichment system.

Metagenome-based analysis revealed that Candidatus Contendobacter was the dominant GAOs.

The EMC pathway was a novel propionyl-CoA synthesis pathway for PHV in Candidatus Contendobacter.

Supported cuprous oxide-clinoptilolite nanoparticles: Brief identification and the catalytic kinetics in the photodegradation of dichloroaniline

The supported CuO onto the ball-mill prepared clinoptilolite nanoparticles (CNPs) was prepared via an ion exchange process in Cu(II) aqueous solution followed by the calcination process. The CuO-CNP samples with various CuO loading were briefly characterized by XRD, FTIR, and DRS. pHpzc was varied in the range of 6.3 to 6.8 depending on the amount of loaded CuO in the samples. The band gap energy was estimated by applying the Kubelka-Munk equation on the DRS results that varied from 2.41 to 2.50 eV depending on the CuO loading. Based on the Scherrer equation nano-sized CuO-CNP at about 50 nm was estimated. The CuO-CNP contained 3.9% CuO showed the highest photocatalytic activity toward dichloroaniline (DCA). The effects of the experimental variables on DCA photodegradation were studied by using the Hinshelwood model. The optimal conditions for obtaining a higher rate for DCA photodegradation were the catalyst dose of 0.5 g/L, C_DCA: 5 ppm, and the initial pH: 3. HPLC analysis of the photodegraded DCA solutions for 180 and 300 min gave the degradation extents 71% and 90%, respectively.

Photocatalytic kinetics of 2,4-dichloroaniline degradation by NiO-clinoptilolite nanoparticles

The ball-mill clinoptilolite nanoparticles (CNP) was ion-exchanged in Ni(II) solutions and calcined to obtain NiO-CNP catalysts with various NiO loadings. The resultant CNP was ion-exchanged in 0.1, 0.2, 0.3, and 0.4 M Ni(II) solutions and then calcined at 450 °C. The resultant NiO-CNPs contained 1.9, 2.3, 3.0, and 3.2% NiO, respectively. The XRD, FTIR, and DRS characterization techniques were applied. By applying the Scherrer equation on the XRD results, the average crystallite size for the NiO-CNP samples was estimated in the range of 42-65 nm. The pHpzc of the NiO-CNP species was slightly changed from 6.8 to 7.6 by an increase in the loaded NiO. The band gap energy of the samples was calculated by applying the Kubelka-Munk equation on the DRS results. The band gap energies of 3.81, 4.05, and 3.63 eV were estimated for the direct electronic transitions of the CN2, CN2.3, and CN3.2 samples, respectively. The boosted photoactivity was obtained in 2,4-dichloroanilyne (DCA) degradation when NiO supported onto both micronized clinoptilolite and its nanoparticles. The effects of the most important experimental variables on DCA photodegradation rate were kinetically studied by applying the Hinshelwood model on the results. The faster rate for the DCA photodegradation was achieved at the optimal conditions, including the catalyst dose: 0.5 g/L, C_DCA: 5 ppm, and the initial pH: 3. Some new peaks were observed in the HPLC chromatograms for the photodegraded DCA solutions after 180 min and 300 min, which showed 84% and 95% DCA photodegradation.

Aerobic degradation of 4-fluoroaniline and 2,4-difluoroaniline: performance and microbial community in response to the inocula

In this study, a distinct inoculum was investigated as an isolated variable within sequencing batch reactors via a comparison of the 4-fluoroaniline (4-FA) or 2,4-difluoroaniline (2,4-DFA) removal amounts. The inocula were derived from a treatment plant for treating pharmaceutical wastewater plus a small amount of municipal sewage (PMS), a treatment plant for treating fluoridated hydrocarbon wastewater (FHS), and a treatment plant for treating the comprehensive wastewater in an industrial park (CIS). There were slight differences among the degradation patterns of the 4-FA for the three inocula, whether during the enrichment period or the high concentration shock period. In contrast, it was observed that the degradation efficiency of 2,4-DFA initially varied with the inocula. The FHS-derived inoculum was determined to be optimal, exhibiting the earliest degradation reaction only after an acclimation of 7 days had the highest degradation rate constant of 0.519 h^-1, and had the fastest recovery time of three weeks after high concentration shock. Additionally, compared with the PMS-derived inoculum, the CIS-derived inoculum exhibited an earlier degradation reaction within three weeks, and a higher microbial diversity, but a lower shock resistance and degradation rate constant of 0.257 h^-1. High-throughput sequencing demonstrated that each final consortium was different in composition, and the microbial consortia developed well on the inoculum and substrate. In comparison of the similarity among the three 2,4-DFA enrichment cultures, the higher similarity (63.9-70.0%) among three final consortia enriching with 4-FA was observed. The results indicated that the inoculum played an important role in the degradation of FAs and the microbial bacterial communities of final consortia, and the effect extent might well depend on the fluorinated level of FAs.

Biodegradation of propanil by Acinetobacter baumannii DT in a biofilm-batch reactor and effects of butachlor on the degradation process

The herbicide, propanil, has been extensively applied in weed control, which causes serious environmental pollution. Acinetobacter baumannii DT isolated from soil has been used to determine the degradation rates of propanil and 3,4-dichloroaniline by freely suspended and biofilm cells. The results showed that the bacterial isolate could utilize both compounds as sole carbon and nitrogen sources. Edwards's model could be fitted well to the degradation kinetics of propanil, with the maximum degradation of 0.027 ± 0.003 mM h-1. The investigation of the degradation pathway showed that A. baumannii DT transformed propanil to 3,4-dichloroaniline before being completely degraded via the ortho-cleavage pathway. In addition, A. baumannii DT showed high tolerance to butachlor, a herbicide usually mixed with propanil to enhance weed control. The presence of propanil and butachlor in the liquid media increased the cell surface hydrophobicity and biofilm formation. Moreover, the biofilm reactor showed increased degradation rates of propanil and butachlor and high tolerance of bacteria to these chemicals. The obtained results showed that A. baumannii DT has a high potential in the degradation of propanil.

Impact of temperature changes and pH on aqueous solutions of TCAB, a derived propanil contaminant

3,4,3',4'-tetrachloroazobenzene known as TCAB is an unwanted product derivate from the degradation of propanil herbicide. In this work UV-visible and infrared spectroscopies were used to experimentally explore the impact of pH and temperature changes of TCAB in aqueous and ethanol solutions. Two isomeric forms, cis and trans, are present in solution. The density functional theory (DFT) with PCM methodology was used to analyze the stability of each isomer in solution phase by the evaluation of solvation energy and frontier orbital energies of TCBA at 25 and 40 °C. This compound has been studied from room temperature to 50 °C, revealing the weakening of trans form with an increment of cis form in ethanol and high temperature. Interestingly, under acid conditions the protonated azo compound was evidenced in solution. We found that the cis form is predominant in aqueous solution at 40 °C and 30 min. Finally, FTIR studies show that the increasing of the temperature promote irreversible structural changes via a trans to cis interconversion process. The derivative results from this study may contributed to understanding of transformation of TCAB in aqueous solution by pH and temperature changes.

State of the art of the environmental behaviour and removal techniques of the endocrine disruptor 3,4-dichloroaniline

In recent years, the presence of Endocrine Disrupting Chemicals (EDCs) in wastewater discharges from agricultural and industrial sources, ^[1] fresh- and estuarine-waters, as well as soils, has been reported in the literature. ^[2] Studies of adverse changes in wildlife, linked to environmental exposure to these substances, and the suggestion that humans could also be at similar risk of adverse health effects, ^[3-5] have raised concern for urgent action to understand and reduce such risks. 3,4-Dichloroaniline (3,4-DCA) has been recognized as an EDC, with regards to endocrine disruption data for both wildlife populations and human health. ^[5] 3,4-DCA is present in the environment as a product of the biodegradation of phenylurea and phenylcarbamate pesticides ^[6,7] ; furthermore, it can be introduced from industrial and municipal wastewater that is insufficiently purified, or via accidental spills. ^[8-10] Increasing concentrations of 3,4-DCA in soil and water are the result of its high persistence and accumulation, as well as its low biodegradability. ^[11,12] Hence, remediation techniques require in-depth study, especially when considering the low removal achieved by traditional activated sludge treatments, and the generation of carcinogenic trihalomethanes as a consequence of the chlorine oxidation methods frequently used in drinking water plants. ^[13] Fe⁰/H₂O₂ systems, photodegradation using doped TiO₂, and the use of dielectric barrier discharge reactors, seem to be the most promising techniques for the removal of 3,4-DCA from water.

Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium

Strain EPL6^T, a Gram-negative, motile, short rod was isolated from a propanil and 3,4-dichloroaniline enrichment culture produced from rice paddy soil. Based on the analyses of the 16S rRNA gene sequence, strain EPL6^T was observed to be a member of the family Comamonadaceae, sharing the highest pairwise identity with type strains of the species Alicycliphilus denitrificans K601^T (96.8 %) and Melaminivora alkalimesophila CY1^T (96.8 %). Strain EPL6^T was able to grow in a temperature range of 15-37 °C, pH 6-9 and in the presence of up to 4 % (w/v) NaCl and tested positive for catalase and oxidase reactions. The major respiratory quinone was Q8. The genomic DNA had a G+C content of 69.4±0.9 mol%. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol, and the major fatty acid methyl esters comprised C16 : 0, C18 : 1ω7c and summed feature 3 (C16 : 1ω7c/iso-C15 : 0 2-OH). Comparison of the genome sequence of strain EPL6^T and of its closest neighbours, Melaminivora alkalimesophila CY1^T and Alicycliphilus denitrificans K601^T, yielded values of ANI ≤84.1 % and of AAI ≤80.3 %. Therefore, the genetic, phylogenetic, phenotypic and chemotaxonomic characteristics support the classification of this organism into a new taxon. Considering the genetic divergence of strain EPL6^T from the type strains of the closest species, which belong to distinct genera, we propose a new genus within the family Comamonadaceae, named Oryzisolibacter propanilivorax gen. nov., sp. nov., represented by the isolate EPL6^T as the type strain of the species (=LMG 28427^T=CECT 8927^T).

Toxicidad del herbicida Propanil (Propanil Trust® 500EC) en embriones y renacuajos de tres especies de anuros

El Propanil es un herbicida empleado en el control de arvenses que puede afectar organismos no blanco como los anuros. El objetivo del trabajo fue evaluar los efectos letales (concentración letal media, CL50) y subletales (retrasos en el desarrollo, longitud total y máxima distancia de natación) del Propanil (Propanil Trust® 500EC) sobre embriones y renacuajos de tres especies de anuros bajo condiciones de laboratorio y microcosmos, que incluyen algunos componentes de campo (sedimentos y material vegetal). La especie más sensible fue Rhinella humboldti (embriones: laboratorio CL50= 9,14 mg/L y microcosmos CL50= 83,92 mg/ha; renacuajos: laboratorio CL50= 5,09 mg/L y microcosmos CL50= 44,52 mg/ha), y la más resistente Hypsiboas crepitans (embriones: laboratorio CL50= 19,58 mg/L y microcosmos CL50= 179,53 mg/ha; renacuajos: laboratorio CL50= 16,54 mg/L y microcosmos CL50= 190,72 mg/ha). Engystomops pustulosus mostró una sensibilidad intermedia. En general, en laboratorio los CL50 indicaron una letalidad alta y se encontraron cambios significantes en la longitud total y la máxima distancia de natación de los organismos expuestos al Propanil, contrario a los resultados en microcosmos, aunque el tiempo de desarrollo embrionario no mostró diferencias entre tratamientos. Al comparar los CL50 se encontró que los renacuajos fueron más sensibles al herbicida que los embriones. En conclusión, el Propanil resultó tóxico para los embriones y renacuajos en condiciones de laboratorio pero tuvo un efecto menor en microcosmos. Esto demuestra que los componentes de campo de los microcosmos y la falta de renovación de las soluciones reducen la toxicidad del Propanil en los anuros de estudio.

Homologues of xenobiotic metabolizing N-acetyltransferases in plant-associated fungi: Novel functions for an old enzyme family

Plant-pathogenic fungi and their hosts engage in chemical warfare, attacking each other with toxic products of secondary metabolism and defending themselves via an arsenal of xenobiotic metabolizing enzymes. One such enzyme is homologous to arylamine N-acetyltransferase (NAT) and has been identified in Fusarium infecting cereal plants as responsible for detoxification of host defence compound 2-benzoxazolinone. Here we investigate functional diversification of NAT enzymes in crop-compromising species of Fusarium and Aspergillus, identifying three groups of homologues: Isoenzymes of the first group are found in all species and catalyse reactions with acetyl-CoA or propionyl-CoA. The second group is restricted to the plant pathogens and is active with malonyl-CoA in Fusarium species infecting cereals. The third group generates minimal activity with acyl-CoA compounds that bind non-selectively to the proteins. We propose that fungal NAT isoenzymes may have evolved to perform diverse functions, potentially relevant to pathogen fitness, acetyl-CoA/propionyl-CoA intracellular balance and secondary metabolism.

Modelling the biodegradation kinetics of the herbicide propanil and its metabolite 3,4-dichloroaniline

This study models the biodegradation kinetics of two toxic xenobiotic compounds in enriched mixed cultures: a commonly applied herbicide (3,4-dichloropropionanilide or propanil) and its metabolite (3,4-dichloroaniline or DCA). The dependence of the metabolite degradation kinetics on the presence of the parent compound was investigated, as well as the influence of the feeding operation strategy. Model equations were proposed incorporating substrate inhibition of the parent compound and the metabolite during dump feed operation of a sequencing batch reactor (SBR). The kinetic parameters of the biomass were compared to step feed degradation of the SBR. The relationship between propanil and DCA degradation rates with the concentration of each compound was studied. A statistical comparison was carried out between the model predictions and experimental results. Substrate inhibition by both propanil and DCA was prominent during dump feed operation but insignificant during step feed. With both feeding strategies, the metabolite degradation was found to be dependent on the concentration of both the parent compound and the metabolite, suggesting that the DCA degrading enzymatic activity was independent of the detachment of the propionate moiety from the propanil molecule. After incorporating this finding into the model equations, the model was able to describe well the propanil and DCA degradation profiles, with an r (2) correlation >0.95 for each case. A kinetic model was developed for the degradation of the herbicide propanil and its metabolite DCA. An exponential inhibition term was incorporated to describe the substrate inhibition during dump feeding. The kinetics of metabolite degradation was dependent of the sum of the concentrations of metabolite and parent compound, which could also be of relevance to future xenobiotic modelling applications from wastewater.

Degradation of aqueous 3,4-dichloroaniline by a novel dielectric barrier discharge plasma reactor

Degradation of aqueous 3,4-dichloroaniline (3,4-DCA) was conducted in a novel dielectric barrier discharge (DBD) plasma reactor. The factors affecting the degradation efficiency of 3,4-DCA and the degradation mechanism of 3,4-DCA were investigated. The experimental results indicated that the degradation efficiency of 3,4-DCA increased with increasing input power intensity, and the degradation of 3,4-DCA by the novel DBD plasma reactor fitted pseudo-first-order kinetics. Higher degradation efficiency of 3,4-DCA was observed in acidic conditions. The degradation efficiency of 3,4-DCA, the removal rate of total organic carbon (TOC), and the detected Cl(-) increased dramatically with adding Fe(2+) or Fe(3+). Degradation of 3,4-DCA could be accelerated or inhibited in the presence of H2O2 depending on the dosage. Several degradation intermediates of 3,4-DCA such as 1,2-dichlorobenzene, 2-chloro-1,4-benzoquinone, 3,4-dichlorophenyl isocyanate, 2-chlorohydroquinone, 3,4-dichloronitrobenzene, and 3,4-dichlorophenol were identified by gas chromatography mass spectrometry (GC-MS) analysis. Based on the identification of aromatic intermediates, acetic acid, formic acid, oxalic acid, and Cl(-) released, a possible mineralization pathway of 3,4-DCA was proposed.

Aerobic degradation study of three fluoroanilines and microbial community analysis: the effects of increased fluorine substitution

The fate of fluorinated compounds in the environment, especially polyfluorinated aromatics, is a matter of great concern. In this work, 4-Fluoroaniline (4-FA), 2,4-Difluoroanilines (2,4-DFA), and 2,3,4-Trifluoroanilines (2,3,4-TFA), were chosen as the target pollutants to study their biodegradability under aerobic conditions. The required enriched time of the mixed bacterial culture for degrading 4-FA, 2,4-DFA, and 2,3,4-TFA was 26, 51, and 165 days, respectively, which suggested that the longer enrichment time was required with the increase of fluorine substitution. At the initial concentrations of 100-200 mg L(-1), the 4-FA, 2,4-DFA, and 2,3,4-TFA could be degraded completely by the mixed bacterial culture. The maximum specific degradation rates of 4-FA, 2,4-DFA, and 2,3,4-TFA were 22.48 ± 0.55, 15.27 ± 2.04, and 8.84 ± 0.93 mg FA (g VSS h)(-1), respectively. Also, the three FAs enriched cultures showed certain potential of degrading other two FAs. The results from enzyme assay suggested the expression of meta-cleavage pathways during three FAs degradation. The denaturing gradient gel electrophoresis analysis revealed that unique bacterial communities were formed after FAs enrichment and these were principally composed of β-Proteobacteria, Oscillatoriophycideae, δ-Proteobacteria, α-Proteobacteria, Thermales, Xanthomonadales, Deinococci, Flavobacteriia, and Actinobacteridae. The Shannon-Wiener indexes in three FAs enriched culture decreased with the increase of fluorine substitution, indicating the significant effect of fluorine substitution on the microbial diversity. These findings supply important information on the fate of three FAs under aerobic environment, and the bacterial communities in their degradation systems.

Biodegradation of 3,4 dichloroaniline by fungal isolated from the preconditioning phase of winery wastes subjected to vermicomposting

A hazardous contaminant, 3,4-dichloroaniline (DCA) is widespread in the environment due to its extensive use in the manufacture of chemicals and its application in different sectors. The ability of fungi grow on in winery wastes in the preconditioning period of vermicomposting to degrade DCA was investigated. Three filamentous fungi (F1, F2, and F3) were isolated and one identified as Aspergillus niger and two as Fusarium sp. strains. The culture media with the fungus alone or in consortium (Fmix) with DCA as the nitrogen source were analyzed by solid-phase microextraction and gas chromatography-mass spectrometry (SPME-GC/MS). The fastest degradation rate was measured in Fmix with a DT50 of 0.85day(-1). Fusarium sp. and A. niger differed in the metabolism of DCA. Five metabolites were identified as a result of oxidation, co-denitrification, N-acetylation, and polymerization reactions. The major metabolites were 3,4-dichloroacetanilide and dichloroquinolines. The azo-metabolites tetrachloroazobenzene and tetracloroazoxybenzene and 3,4-dichloronitrobenzene were found in minor amounts but appeared to be the most persistent in the Fusarium cultures (half-lives ranging from 8.3 to 30.9 days). This study highlights the metabolic potential of microorganisms in the preconditioning period of the vermicomposting process and its possible application for in situ bioremediation strategies.

Propionate addition enhances the biodegradation of the xenobiotic herbicide propanil and its metabolite

This study investigated ways of stimulating the biodegradation rates of the commonly applied herbicide, 3,4-dichloropropionanilide (propanil), and its metabolite, 3,4-dichloroaniline (DCA), as well as the growth rate of propanil- and DCA-degrading organisms in a mixed culture. Propionate, the other metabolite of propanil, stimulated the specific degradation rates of both propanil and DCA after a brief acclimation period. A metabolic model developed to characterise the metabolism of propanil and DCA biodegradation showed that the efficiency of oxidative phosphorylation (i.e. P/O ratio), which measures the metabolic efficiency, increased over time by 6- to 10-fold. This increase was accompanied by a 5- to 10-fold increase in the propanil and DCA biodegradation degradation rates. The biodegradation rates of the culture were unaffected when using an irrigation water matrix (Tejo river, Portugal), highlighting the utility of the culture for bioaugmentation purposes.

Biodegradation of clofibric acid and identification of its metabolites

Clofibric acid (CLF) is the pharmaceutically active metabolite of lipid regulators clofibrate, etofibrate and etofyllinclofibrate, and it is considered both environmentally persistent and refractory. This work studied the biotransformation of CLF in aerobic sequencing batch reactors (SBRs) with mixed microbial cultures, monitoring the efficiency of biotransformation of CLF and the production of metabolites. The maximum removal achieved was 51% biodegradation (initial CLF concentration=2 mg L(-1)), where adsorption and abiotic removal mechanisms were shown to be negligible, showing that CLF is indeed biodegradable. Tests showed that the observed CLF biodegradation was mainly carried out by heterotrophic bacteria. Three main metabolites were identified, including α-hydroxyisobutyric acid, lactic acid and 4-chlorophenol. The latter is known to exhibit higher toxicity than the parent compound, but it did not accumulate in the SBRs. α-Hydroxyisobutyric acid and lactic acid accumulated for a period, where nitrite accumulation may have been responsible for inhibiting their degradation. A metabolic pathway for the biodegradation of CLF is proposed in this study.

Cloning and characterization of a novel amidase from Paracoccus sp. M-1, showing aryl acylamidase and acyl transferase activities

A novel amidase gene, designated pamh, was cloned from Paracoccus sp. M-1. Site-directed mutagenesis and bioinformatic analysis showed that the PamH protein belonged to the amidase signature enzyme family. PamH was expressed in Escherichia coli, purified, and characterized. The molecular mass of PamH was determined to be 52 kDa with an isoelectric point of 5.13. PamH displayed its highest enzymatic activity at 45°C and at pH 8.0 and was stable within a pH range of 5.0-10.0. The PamH enzyme exhibited amidase activity, aryl acylamidase activity, and acyl transferase activity, allowing it to function across a very broad substrate spectrum. PamH was highly active on aromatic and short-chain aliphatic amides (benzamide and propionamide), moderately active on amino acid amides, and possessed weak urease activity. Of the anilides examined, only propanil was a good substrate for PamH. For propanil, the k (cat) and K (m) were 2.8 s(-1) and 158 μM, respectively, and the catalytic efficiency value (k (cat)/K (m)) was 0.018 μM(-1) s(-1). In addition, PamH was able to catalyze the acyl transfer reaction to hydroxylamine for both amide and anilide substrates, including acetamide, propanil, and 4-nitroacetanilide; the highest reaction rate was shown with isobutyramide. These characteristics make PamH an excellent candidate for environmental remediation and an important enzyme for the biosynthesis of novel amides.