The role of zeta potential in the adhesion of E. coli to suspended intertidal sediments

Modulation of bacterial membranes and cellular macromolecules by dimethyl sulfoxide: A dose-dependent study providing novel insights

Using Escherichia coli as a model, this manuscript delves into the intricate interactions between dimethyl sulfoxide (DMSO) and membranes, cellular macromolecules, and the effects on various aspects of bacterial physiology. Given DMSO's wide-ranging use as a solvent in microbiology, we investigate the impacts of both non-growth inhibitory (1.0 % and 2.5 % v/v) and slightly growth-inhibitory (5.0 % v/v) concentrations of DMSO. The results demonstrate that DMSO causes alterations in bacterial membrane potential, influences the electrochemical characteristics of the cell surface, and exerts substantial effects on the composition and structure of cellular biomolecules. Genome-wide gene expression data from DMSO-treated E. coli was used to further investigate and bolster the results. The findings of this study provide valuable insights into the complex relationship between DMSO and biological systems, with potential implications in drug delivery and cellular manipulation. However, it is essential to exercise caution when utilizing DMSO to enhance the solubility and delivery of bioactive compounds, as even at low concentrations, DMSO exerts non-inert effects on cellular macromolecules and processes.

Antimicrobial Peptide-Inspired Design of Amino-Modified Lignin with Improved Antimicrobial Activities

A major challenge to make use of lignin as an antimicrobial material is the weak antimicrobial activity of industrial lignin. Inspired by the antimicrobial mechanism of actions of antimicrobial peptides, alkyldiamines were employed as lysine mimics for lignin modifications. Accordingly, aminoalkyl-modified lignins with different degrees of substitution of amino groups and different hydrophobicity were synthesized. The chemical structure, properties, and antimicrobial activities of the as-prepared aminoalkyl lignins were thoroughly characterized with state-of-the-art technologies. The results indicated that aminobutyl lignin showed enhanced antimicrobial activity against S. aureus and E. coli and performed even better than copper ions. The antimicrobial mechanism of action of the as-prepared aminobutyl lignin was similar to that of polylysine, which damaged the cell membrane, leading to the leakage of intracellular molecules and death of the cell. This study provides a feasible approach to afford modified lignin with enhanced antimicrobial performance, which would facilitate the high-value valorization of lignin as biological materials.

Impact of TiO2 Reduction and Cu Doping on Bacteria Inactivation under Artificial Solar Light Irradiation

Preparation of TiO₂ using the hydrothermal treatment in NH₄OH solution and subsequent thermal heating at 500-700 °C in Ar was performed in order to introduce some titania surface defects. The highest amount of oxygen vacancies and Ti³⁺ surface defects were observed for a sample heat-treated at 500 °C. The presence of these surface defects enhanced photocatalytic properties of titania towards the deactivation of two bacteria species, E. coli and S. epidermidis, under artificial solar lamp irradiation. Further modification of TiO₂ was targeted towards the doping of Cu species. Cu doping was realized through the impregnation of the titania surface by Cu species supplied from various copper salts in an aqueous solution and the subsequent heating at 500 °C in Ar. The following precursors were used as a source of Cu: CuSO₄, CuNO₃ or Cu(CH₃COO)₂. Cu doping was performed for raw TiO₂ after a hydrothermal process with and without NH₄OH addition. The obtained results indicate that Cu species were deposited on the titania surface defects in the case of reduced TiO₂, but on the TiO₂ without NH₄OH modification, Cu species were attached through the titania adsorbed hydroxyl groups. Cu doping on TiO₂ increased the absorption of light in the visible range. Rapid inactivation of E. coli within 30 min was obtained for the ammonia-reduced TiO₂ heated at 500 °C and TiO₂ doped with Cu from CuSO₄ solution. Photocatalytic deactivation of S. epidermidis was greatly enhanced through Cu doping on TiO₂. Impregnation of TiO₂ with CuSO₄ was the most effective for inactivation of both E. coli and S. epidermidis.

Magnetic porphyrin-based metal organic gel for rapid RhB removal and enhanced antibacterial activity by heterogeneous Photo-Fenton reaction under visible light

Nanomaterials with visible light-driven catalytic ability are beneficial in controlling environmental pollutants. Porphyrin-based metal organic gel (MOG) was herein synthesized in one step and magnetic metal organic gel (MMOG) was successfully prepared via in-situ reaction of MOG and Fe₃O₄. This MMOG was developed as a novel visible light assisted Fenton-like catalyst. The catalytic experiments showed the high photo-Fenton activity of MMOG in the degradation of Rhodamine B (RhB) in the presence of visible light and H₂O₂ with a RhB degradation efficiency of 94.2% within 40 min. Notably, the obtained MMOG can kill E. coli and S. aureus with high killing rate (>99.999%) under visible light. Importantly, the MMOG can be recovered simply by an external magnetic field due to the unique magnetic property. This easily synthesized MMOG with photo-Fenton activity under visible light and magnetic property makes MOG based on the photo-Fenton reaction a prospective material for the environmental and biomedical applications.

Activation of the Type III Secretion System of Enteropathogenic Escherichia coli Leads to Remodeling of Its Membrane Composition and Function

The cell envelope of Gram-negative bacteria is a complex structure, essential for bacterial survival and for resistance to many antibiotics. Channels that cross the bacterial envelope and the host cell membrane form secretion systems that are activated upon attachment to host, enabling bacteria to inject effector molecules into the host cell, required for bacterium-host interaction. The type III secretion system (T3SS) is critical for the virulence of several pathogenic bacteria, including enteropathogenic Escherichia coli (EPEC). EPEC T3SS activation is associated with repression of carbon storage regulator (CsrA), resulting in gene expression remodeling, which is known to affect EPEC central carbon metabolism and contributes to the adaptation to a cell-adherent lifestyle in a poorly understood manner. We reasoned that the changes in the bacterial envelope upon attachment to the host and the activation of a secretion system may involve a modification of the lipid composition of bacterial envelope. Accordingly, we performed a lipidomics analysis on mutant strains that simulate T3SS activation. We saw a shift in glycerophospholipid metabolism toward the formation of lysophospholipids, attributed to corresponding upregulation of the phospholipase gene pldA and the acyltransferase gene ygiH upon T3SS activation in EPEC. We also detected a shift from menaquinones and ubiquinones to undecaprenyl lipids, concomitant with abnormal synthesis of O antigen. The remodeling of lipid metabolism is mediated by CsrA and associated with increased bacterial cell size and zeta potential and a corresponding alteration in EPEC permeability to vancomycin, increasing the sensitivity of T3SS-activated strains and of adherent wild-type EPEC to the antibiotic. IMPORTANCE The characterization of EPEC membrane lipid metabolism upon attachment to the host is an important step toward a better understanding the shift of EPEC, a notable human pathogen, from a planktonic to adherent lifestyle. It may also apply to other pathogenic bacteria that use this secretion system. We predict that upon attachment to host cells, the lipid remodeling upon T3SS activation contributes to bacterial fitness and promotes host colonization, and we show that it is associated with increased cell permeability and higher sensitivity to vancomycin. To the best of our knowledge, this is the first demonstration of a bacterial lipid remodeling due to activation of a secretion system.

Diversity and distribution of antibiotic resistance genes associated with road sediments transported in urban stormwater runoff

Recently, increasing attention has been paid to antibiotic resistance genes (ARGs) in urban stormwater runoff. However, there were little data on the diversity and distribution of ARGs associated with road sediments transported in runoff. The investigation of ARGs diversity showed that sulfonamide resistance genes (sul2 and sul3) occupied 61.7%-82.3% of total ARGs in runoff. The analysis of ARGs distribution in particulate matter (PM) implied that both tetQ and trbC existed mainly in PM with size of 150-300 μm, but other ARGs and mobile genetic elements (MGEs) were dominant in PM with size <75 μm. The discussion of potential hosts indicated that target genes (ermF, blaOXA1/blaOXA30, ermC, qnrA, sul2, tnpA-01, intI2, tetW, intI1, sul3, trbC) had the strongest subordinate relationship with Proteobacteria at phylum level and Enterobacter at genus level. The effect evaluation of ARGs distribution suggested that 13 kinds of ARGs were positively correlated with Pr/PS and Zeta potential, resulting in the more ARGs in PM with smaller size (<75 μm).

Effects and interactions of metal oxides in microparticle-enhanced cultivation of filamentous microorganisms

Filamentous microorganisms are used as molecular factories in industrial biotechnology. In 2007, a new approach to improve productivity in submerged cultivation was introduced: microparticle-enhanced cultivation (MPEC). Since then, numerous studies have investigated the influence of microparticles on the cultivation. Most studies considered MPEC a morphology engineering approach, in which altered morphology results in increased productivity. But sometimes similar morphological changes lead to decreased productivity, suggesting that this hypothesis is not a sufficient explanation for the effects of microparticles. Effects of surface chemistry on particles were paid little attention, as particles were often considered chemically-inert and bioinert. However, metal oxide particles strongly interact with their environment. This review links morphological, physical, and chemical properties of microparticles with effects on culture broth, filamentous morphology, and molecular biology. More precisely, surface chemistry effects of metal oxide particles lead to ion leaching, adsorption of enzymes, and generation of reactive oxygen species. Therefore, microparticles interfere with gene regulation, metabolism, and activity of enzymes. To enhance the understanding of microparticle-based morphology engineering, further interactions between particles and cells are elaborated. The presented description of phenomena occurring in MPEC eases the targeted choice of microparticles, and thus, contributes to improving the productivity of microbial cultivation technology.

Stent conditioned media for in vitro evaluation of hydrophobic stent coatings

In vitro cell studies of hydrophobic drugs face difficulties associated with their low aqueous solubility. To study poorly soluble drugs in bio-relevant media, solubilizing agents are frequently used to make stock solutions before final reconstitution in media. This results in drug concentrations that are not representative of in vivo conditions and may pose adverse effects on cells' biological functions. This is especially true of typical hydrophobic stent coatings intended for vascular applications, where poor in vitro to in vivo correlation exists. To this end, a method for preparation of hydrophobic drug suspensions in bio-relevant media via stent conditioned media using paclitaxel (PTX) as a model drug is proposed. Since the drug is present as a suspension, this media was validated for its content uniformity and potency to induce formation of micronuclei, typical of cells undergoing prolonged mitotic arrest. Further, PTX uptake by endothelial cells was quantified and showed that the PTX stent conditioned media (at a theoretical concentration of 100 μM) suppressed cellular growth equivalent to the 0.1 μM DMSO dissolved PTX.

Biological power generation and earthworm assisted sludge treatment wetland to remove organic matter in sludge and synchronous power generation

In order to eliminate the weak degradation ability of organic matter in sludge treatment wetland (STW). In current work, a combined biological power generation and earthworm assisted sludge treatment wetland (BE-STW) system is proposed for the first time to accelerate degradation and dehydration process of organics in STW, thusly, recovering biomass energy in sludge. Experimental results show that S₄ system (earthworm and bioelectricity combined) yields a voltage of 0.832 V and maximum power density of 94.98 W/m² in the 5th day. The combination of earthworm, microorganism and plants in STW system can reduce the ratio of volatile solids to total solids (VS/TS) to 15% while the removal rate of total chemical oxygen demand (TCOD) reaches 92.1%. The BE-STW system increases sludge particle size while reduces absolute value of Zeta and extracellular polymeric substances (EPS) content, so that the moisture content of effluent sludge retains to 66.8%. Meanwhile, the richness of bacterial communities in S₄ proves that bioelectrochemistry and earthworm can effectively improve the sludge treatment effect.

Visible-Light-Responsive Nanofibrous α-Fe2O3 Integrated FeOx Cluster-Templated Siliceous Microsheets for Rapid Catalytic Phenol Removal and Enhanced Antibacterial Activity

Visible-light-driven environmental contaminants control using 2D photocatalytic nanomaterials with an unconfined reaction-diffusion path is advantageous for public health. Here, cost-effective siliceous composite microsheets (FeSiO-MS) combined with two distinct refined α-Fe₂O₃ nanospecies as photofunctional catalysts were constructed via a one-pot synthesis approach. Through precise control of Fe²⁺ precursor addition, specially configured α-Fe₂O₃ nanofibers combined with FeOx cluster-functionalized siliceous microsheets of ∼15 nm gradually evolved from the iron oxide-bearing molecular sieve, endowing a superior light-response characteristic of the formed nanocomposite. The catalytic experiment along with the ESR study demonstrated that the produced FeSiO-MS showed reinforced photo-Fenton reactivity, which was effective for rapid phenol degradation under visible light radiation. Moreover, the phenol removal process was found to be regulated by the specially configured types and concentrations of iron oxides. Notably, the obtained composites exhibited a considerable visible-light-induced bactericidal effect against E. coli. The constructed FeSiO-MS nanocomposites as integrated and eco-friendly photocatalysts exhibit enormous potentials for environmental and hygienic application.

Zeta potential beyond materials science: Applications to bacterial systems and to the development of novel antimicrobials

This review summarizes the theory of zeta potential (ZP) and the most relevant data about how it has been used for studying bacteria. We have especially focused on the discovery and characterization of novel antimicrobial compounds. The ZP technique may be considered an indirect tool to estimate the surface potential of bacteria, a physical characteristic that is key to maintaining optimal cell function. For this reason, targeting the bacterial surface is of paramount interest in the development of new antimicrobials. Surface-acting agents have been found to display a remarkable bactericidal effect and have simultaneously revealed a low tendency to trigger resistance. Changes in the bacterial surface as a result of various processes can also be followed by ZP measurements. However, due to the complexity of the bacterial surface, some considerations regarding the assessment of ZP must first be taken into account. Evidence on the application of ZP measurements to the characterization of bacteria and biofilm formation is presented next. We finally discuss the feasibility of using the ZP technique to assess antimicrobial-induced changes in the bacterial surface. Among these changes are those related to the interaction of the agent with different components of the cell envelope, membrane permeabilization, and loss of viability.

Rainfall-driven E. coli transfer to the stream-conduit network observed through increasing spatial scales in mixed land-use paddy farming karst terrain

Karst aquifers have distinctive hydrology and supply 25% of the world's population with drinking water, making them a critical geological setting for understanding and managing microbial water pollution. Rainfall causes elevated concentrations and loading of faecal microorganisms, e.g. E. coli, in catchment surface and groundwater systems, increasing the risk of human exposure to faecally-contaminated water. However, effective management of microbial water quality in complex karst catchments is constrained by limited understanding of E. coli - discharge responses to rainfall. We analysed how rainfall events of varying magnitude (2.4-100 mm) control E. coli-discharge dynamics at increasing spatial scales in a mixed land-use karst catchment in southwest China. During the wet season, hourly water sampling was undertaken throughout five storm events to characterise in high detail E. coli emergence with resulting flow across multiple sites of varying catchment area, stream order, and land-use. E. coli concentration was found to increase by 1-3 orders of magnitude following rainfall events. Maximum E. coli concentration and speed of E. coli recession were influenced by rainfall (amount, intensity), timing of agricultural activities, and position in the hydrological system. For high intensity events ∼90% of the cumulative E. coli export occurred within 48 h. E. coli concentration increased with increasing discharge at all sites. E. coli concentration at low discharge was higher in the headwaters than at the catchment outlet, while the rate of increase in E. coli concentration with increasing discharge appears to follow the opposite trend, being higher at the catchment outlet than the headwaters. This was attributed to the decreasing flow path gradient and increasing degree of development of the fissure network, but further event monitoring at varying catchment scales is required to confirm this relationship. The results provide novel insight into how rainfall characteristics combine with land-use and catchment hydrology to control E. coli export in karst landscapes.

Evaluation of modified basalt fiber as biological carrier media for wastewater treatment with the extended DLVO theory model

In this study, environment-friendly inorganic basalt fiber (BF) was used as bio-carrier for wastewater treatment. To enhance the bio-affinity, raw BF was modified by grafting the diethylamino functional groups to make the surface more hydrophilic and electro-positive. Contact angle and zeta potential of modified basalt fiber (MBF) were characterized. The capacity of MBF bio-carriers was evaluated by microorganism immobilization tests. To explain the mechanism of capacity enhancement by modification, the profiles of total interaction energy barrier between raw BF (or MBF) and bacteria (Escherichia coli, E. coli) were discussed based on the extended Derjaguin-Landau-Verwey-Overbeek (DLVO) theory. The results showed the contact angle of fiber decreased from 89.71° to 63.08° after modification, and zeta potential increased from - 18.53 to +10.58 mV. The microorganism immobilization tests showed that the surface modification accelerated the initial bacterial adhesion on fiber. The total interaction energy barrier between MBF and E. coli disappeared as a result of electrostatic and hydrophilic attractive forces, and enhanced the irreversible adhesion. MBF bio-carrier medium provides a promising alternative to conventional bio-carrier materials for wastewater treatment. Graphical abstract.

Curli production enhances clay-E. coli aggregation and sedimentation

Curli are amyloid fibrils that polymerize extracellularly from curlin, a protein that is secreted by many enteric bacteria and is important for biofilm formation. Presented here is a systematic study of the effects of curli on bacteria-clay interactions. The aggregation trends of curli-producing and curli-deficient bacteria with clay minerals were followed using gradient-sedimentation experiments, Lumisizer measurements, bright-field and electron microscopy. The results revealed that curli-producing bacteria auto-aggregated into high-density flocs (1.23 g/cm³), ranging in size from 10 to 50 μm, that settle spontaneously. In contrast, curli-deficient bacteria remained relatively stable in solution as individual cells (1-2 μm, 1.18 g/cm³), even at high ionic strength (350 mM). The stability of clay suspensions mixed with curli-deficient bacteria depended on clay type and ionic strength, the general trends being consistent with the classic DLVO theory. However, suspensions of curli-producing bacteria mixed with clays were highly unstable regardless of clay type and solution chemistry, suggesting extensive interactions between the clays and the bacteria-curli aggregates. SEM measurements revealed interesting differences in morphologies of the aggregates; montmorillonite particles coated the bacterial auto-aggregates whereas the kaolinite platelets were embedded within the larger curli-bacteria aggregates. These new observations regarding the densities, aggregation trends, and morphologies of bacteria-curli and bacteria-curli-clay complexes make it clear that production of surface appendages, such as curli, need to be considered when addressing the fate, activity and transport of bacteria - particularly in aquatic environments.

Purification of harvested rainwater using slow sand filters with low-cost materials: Bacterial community structure and purifying effect

Slow sand filters (SSFs) have been shown to effectively improve water quality. The aim of the present study was to obtain low-cost materials (LCMs) as filter mediums (FMs) to efficiently purify harvested rainwater and to document the relationship between bacterial community structure and water purification. The red clay was mixed with crushed limestone and crushed brick, respectively. The mixtures or brick powder were used as the filter media for SSFs. Laboratory column tests were conducted in conjunction with the monitoring of representative water quality parameters (COD, NH₄⁺, CFU and total coliforms) to estimate the performance of low-cost material slow sand filters (LCM-SSFs), including the time needed for biofilm maturation. The relationship between bacterial community structure and SSF performance was determined using a combination of 16S rRNA gene sequencing and an array of statistical techniques. The results demonstrated that LCM-SSFs perform well in purifying harvested rainwater, and are of superior economic benefit. LCMs had a stronger adsorptivity than quartz sand, which enhanced the purification of harvested rainwater before the biofilms matured, and shorten the time required for biofilm maturation. During the 90-day laboratory experiment, a mixture of crushed limestone and red clay exhibited the best performance. The abundance of Opitutae could be used as a potential indicator of NH₄⁺ removal efficiency by SSFs. Schmutzdecke was characterized by abundant, diverse and evenly distributed bacterial communities that produced rich, stable and robust environmental functions, and that possessed an excellent purifying capacity. Environmental conditions associated with low ecological stress, such as neutral pH filter mediums and lucifugal experimental conditions, were conducive to the diversity and evenness of effluent bacterial communities and improved the performance of LCM-SSFs in purifying harvested rainwater.

Effect of the particle size and surface area on Escherichia coli attachment to mineral particles in fresh water

The objective of this study was to assess the effects of the particle size and specific surface area (SSA) on the attachment of Escherichia coli to sediment particles. To exclude the effect of different sediment mineral compositions, pure minerals were used, and three typical suspended sediment (<62 μm) components, quartz, K-feldspar and calcite, were separated into four groups with different grain size distributions. Equilibrium attachment experiments covering common E. coli concentrations in surface water were conducted for each group. The results show that the finer fractions of each pure mineral had the greatest attachment capacity. Different mineral properties were measured, as well as an author-defined parameter (SSA_a), which was calculated by integrating the particle size distribution and only reflected the microscopic surface areas accessible to E. coli cells (∼1 μm) while excluding the effects of nanoscopic pores (5-10 nm). Pearson correlation and partial correlation analyses suggested that the partition coefficient (K_d) was positively correlated with the clay content (CC) and SSA_a (P < 0.01). Stepwise multiple regression analysis suggested that SSA_a was the dominant factor (P < 0.01) and was a better explanatory variable than CC. Moreover, in addition to SSA_a, the zeta potential and SSA also partially explained the results (P < 0.05).

Factors affecting the spatial and temporal distribution of E. coli in intertidal estuarine sediments

Microbiological water quality monitoring of bathing waters does not account for faecal indicator organisms in sediments. Intertidal deposits are a significant reservoir of FIOs and this indicates there is a substantial risk to bathers through direct contact with the sediment, or through the resuspension of bacteria to the water column. Recent modelling efforts include sediment as a secondary source of contamination, however, little is known about the driving factors behind spatial and temporal variation in FIO abundance. E. coli abundance, in conjunction with a wide range of measured variables, was used to construct models to explain E. coli abundance in intertidal sediments in two Scottish estuaries. E. coli concentrations up to 6 log₁₀ CFU 100 g dry wt^-1 were observed, with optimal models accounting for E. coli variation up to an adjusted R² of 0.66. Introducing more complex models resulted in overfitting of models, detrimentally affected the transferability of models between datasets. Salinity was the most important single variable, with season, pH, colloidal carbohydrates, organic content, bulk density and maximum air temperature also featuring in optimal models. Transfer of models, using only lower cost variables, between systems explained an average deviance of 42%. This study demonstrates the potential for cost-effective sediment characteristic monitoring to contribute to FIO fate and transport modelling and consequently the risk assessment of bathing water safety.

How can we improve understanding of faecal indicator dynamics in karst systems under changing climatic, population, and land use stressors? - Research opportunities in SW China

Human exposure to water contaminated with faeces is a leading cause of worldwide ill-health. Contaminated water can be transmitted rapidly in karst terrain as a result of the connectivity of surface and groundwater systems, high transmissivity of aquifers over large areas, and well-developed underground conduit systems. Faecal indicator organisms (FIOs) are the most widely-used indicator of faecal contamination and microbial water quality; however, the conceptualisation of FIO risk and associated sources, pathways, and survival dynamics of FIOs in karst landscapes requires a degree of modification from traditional conceptual models of FIO fate and transfer in non-karst systems. While a number of reviews have provided detailed accounts of the state-of-the-science concerning FIO dynamics in catchments, specific reference to the uniqueness of karst and its influence on FIO fate and transfer is a common omission. In response, we use a mixed methods approach of critical review combined with a quantitative survey of 372 residents of a typical karst catchment in the southwest China karst region (SWCKR) to identify emerging research needs in an area where much of the population lives in poverty and is groundwater dependent. We found that the key research needs are to understand: 1) overland and subsurface FIO export pathways in karst hydrology under varying flow conditions; 2) urban and agricultural sources and loading in mixed land-use paddy farming catchments; 3) FIO survival in paddy farming systems and environmental matrices in karst terrain; 4) sediment-FIO interactions and legacy risk in karst terrain; and 5) key needs for improved hydrological modelling and risk assessment in karst landscapes. Improved knowledge of these research themes will enable the development of evidence-based faecal contamination mitigation strategies for managing land and water resources in the SWCKR, which is highly vulnerable to climate change impacts on water supply and quality of water resources.