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Abadal S, Galván P, Mármol A, Mammone N, Ieracitano C, Lo Giudice M, Salvini A, Morabito FC. Graph neural networks for electroencephalogram analysis: Alzheimer's disease and epilepsy use cases. Neural Netw 2025; 181:106792. [PMID: 39471577 DOI: 10.1016/j.neunet.2024.106792] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 07/21/2024] [Accepted: 10/07/2024] [Indexed: 11/01/2024]
Abstract
Electroencephalography (EEG) is widely used as a non-invasive technique for the diagnosis of several brain disorders, including Alzheimer's disease and epilepsy. Until recently, diseases have been identified over EEG readings by human experts, which may not only be specific and difficult to find, but are also subject to human error. Despite the recent emergence of machine learning methods for the interpretation of EEGs, most approaches are not capable of capturing the underlying arbitrary non-Euclidean relations between signals in the different regions of the human brain. In this context, Graph Neural Networks (GNNs) have gained attention for their ability to effectively analyze complex relationships within different types of graph-structured data. This includes EEGs, a use case still relatively unexplored. In this paper, we aim to bridge this gap by presenting a study that applies GNNs for the EEG-based detection of Alzheimer's disease and discrimination of two different types of seizures. To this end, we demonstrate the value of GNNs by showing that a single GNN architecture can achieve state-of-the-art performance in both use cases. Through design space explorations and explainability analysis, we develop a graph-based transformer that achieves cross-validated accuracies over 89% and 96% in the ternary classification variants of Alzheimer's disease and epilepsy use cases, respectively, matching the intuitions drawn by expert neurologists. We also argue about the computational efficiency, generalizability and potential for real-time operation of GNNs for EEGs, positioning them as a valuable tool for classifying various neurological pathologies and opening up new prospects for research and clinical practice.
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Affiliation(s)
- Sergi Abadal
- Universitat Politècnica de Catalunya, 08034, Barcelona, Spain.
| | - Pablo Galván
- Universitat Politècnica de Catalunya, 08034, Barcelona, Spain
| | - Alberto Mármol
- Universitat Politècnica de Catalunya, 08034, Barcelona, Spain
| | - Nadia Mammone
- DICEAM, University Mediterranea of Reggio Calabria, 89122, Reggio Calabria, Italy
| | - Cosimo Ieracitano
- DICEAM, University Mediterranea of Reggio Calabria, 89122, Reggio Calabria, Italy
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2
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Djemili R, Djemili I. Nonlinear and chaos features over EMD/VMD decomposition methods for ictal EEG signals detection. Comput Methods Biomech Biomed Engin 2024; 27:2091-2110. [PMID: 37861376 DOI: 10.1080/10255842.2023.2271603] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 08/30/2023] [Accepted: 10/08/2023] [Indexed: 10/21/2023]
Abstract
The detection and identification of epileptic seizures attracted considerable relevance for the neurophysiologists. In order to accomplish the detection of epileptic seizures or equivalently ictal EEG states, this paper proposes the use of nonlinear and chaos features not computed over the raw EEG signals as it was commonly experienced, but instead over intrinsic mode functions (IMFs) extracted subsequently to the application of newly time-frequency signal decomposition methods on the basis of empirical mode decomposition (EMD) and variational mode decomposition (VMD) methods. The first step within the proposed methodology is to excerpt the various components of the IMFs by EMD and VMD decomposition methods on time EEG segments. The Hjorth parameters, the Hurst exponent, the Recurrence Quantification Analysis (RQA), the detrended fluctuation analysis (DFA), the Largest Lyapunov Exponent (LLE), The Higuchi and Katz fractal dimensions (HFD and KFD), seven nonlinear and chaos features computed over the IMFs were investigated and their classification performances evaluated using the k-nearest neighbor (KNN) and the multilayer perceptron neural network (MLPNN) classifiers. Furthermore, the combination of the best nonlinear features has also been examined in terms of sensitivity, specificity and overall classification accuracy. The publicly available Bonn EEG dataset has been has been employed to validate the efficiency of the proposed method for detecting ictal EEG signals from normal or interictal EEG segments. Among the several experiments involved in the current study, the ultimate results establish that the overall classification accuracy can achieve 100%, 99.45%, 99.8%, 99.8%, 98.6% and 99.1% for six different epileptic seizure detection case problems studied, confirming the ability of the proposed methodology in helping the clinic practitioners in the epilepsy detection care units to classify seizure events with a great confidence.
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Affiliation(s)
| | - Ilyes Djemili
- Lab. Electrotech, Université 20 Août, Skikda, Algeria
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3
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Maxion A, Gaebler AJ, Röhrig R, Mathiak K, Zweerings J, Kutafina E. Spectral changes in electroencephalography linked to neuroactive medications: A computational pipeline for data mining and analysis. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2024; 255:108319. [PMID: 39047578 DOI: 10.1016/j.cmpb.2024.108319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 07/02/2024] [Accepted: 07/05/2024] [Indexed: 07/27/2024]
Abstract
BACKGROUND AND OBJECTIVES The increasing amount of open-access medical data provides new opportunities to gain clinically relevant information without recruiting new patients. We developed an open-source computational pipeline, that utilizes the publicly available electroencephalographic (EEG) data of the Temple University Hospital to identify EEG profiles associated with the usage of neuroactive medications. It facilitates access to the data and ensures consistency in data processing and analysis, thus reducing the risk of errors and creating comparable and reproducible results. Using this pipeline, we analyze the influence of common neuroactive medications on brain activity. METHODS The pipeline is constructed using easily controlled modules. The user defines the medications of interest and comparison groups. The data is downloaded and preprocessed, spectral features are extracted, and statistical group comparison with visualization through a topographic EEG map is performed. The pipeline is adjustable to answer a variety of research questions. Here, the effects of carbamazepine and risperidone were statistically compared with control data and with other medications from the same classes (anticonvulsants and antipsychotics). RESULTS The comparison between carbamazepine and the control group showed an increase in absolute and relative power for delta and theta, and a decrease in relative power for alpha, beta, and gamma. Compared to antiseizure medications, carbamazepine showed an increase in alpha and theta for absolute powers, and for relative powers an increase in alpha and theta, and a decrease in gamma and delta. Risperidone compared with the control group showed a decrease in absolute and relative power for alpha and beta and an increase in theta for relative power. Compared to antipsychotic medications, risperidone showed a decrease in delta for absolute powers. These results show good agreement with state-of-the-art research. The database allows to create large groups for many different medications. Additionally, it provides a collection of records labeled as "normal" after expert assessment, which is convenient for the creation of control groups. CONCLUSIONS The pipeline allows fast testing of different hypotheses regarding links between medications and EEG spectrum through ecological usage of readily available data. It can be utilized to make informed decisions about the design of new clinical studies.
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Affiliation(s)
- Anna Maxion
- Research Group Neuroscience, Interdisciplinary Center for Clinical Research Within the Faculty of Medicine, RWTH Aachen University, Aachen, Germany.
| | - Arnim Johannes Gaebler
- Department of Psychiatry, Psychotherapy and Psychosomatics, Medical Faculty, RWTH Aachen University, Aachen, Germany; Institute of Physiology, Medical Faculty, RWTH Aachen University, Aachen, Germany
| | - Rainer Röhrig
- Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany
| | - Klaus Mathiak
- Department of Psychiatry, Psychotherapy and Psychosomatics, Medical Faculty, RWTH Aachen University, Aachen, Germany
| | - Jana Zweerings
- Department of Psychiatry, Psychotherapy and Psychosomatics, Medical Faculty, RWTH Aachen University, Aachen, Germany
| | - Ekaterina Kutafina
- Institute of Medical Informatics, Medical Faculty, RWTH Aachen University, Aachen, Germany; Institute for Biomedical Informatics, Faculty of Medicine, University Hospital Cologne, University of Cologne, Cologne, Germany
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Tait L, Staniaszek LE, Galizia E, Martin-Lopez D, Walker MC, Azeez AAA, Meiklejohn K, Allen D, Price C, Georgiou S, Bagary M, Khalsa S, Manfredonia F, Tittensor P, Lawthom C, Howes BB, Shankar R, Terry JR, Woldman W. Estimating the likelihood of epilepsy from clinically noncontributory electroencephalograms using computational analysis: A retrospective, multisite case-control study. Epilepsia 2024; 65:2459-2469. [PMID: 38780578 DOI: 10.1111/epi.18024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 05/09/2024] [Accepted: 05/09/2024] [Indexed: 05/25/2024]
Abstract
OBJECTIVE This study was undertaken to validate a set of candidate biomarkers of seizure susceptibility in a retrospective, multisite case-control study, and to determine the robustness of these biomarkers derived from routinely collected electroencephalography (EEG) within a large cohort (both epilepsy and common alternative conditions such as nonepileptic attack disorder). METHODS The database consisted of 814 EEG recordings from 648 subjects, collected from eight National Health Service sites across the UK. Clinically noncontributory EEG recordings were identified by an experienced clinical scientist (N = 281; 152 alternative conditions, 129 epilepsy). Eight computational markers (spectral [n = 2], network-based [n = 4], and model-based [n = 2]) were calculated within each recording. Ensemble-based classifiers were developed using a two-tier cross-validation approach. We used standard regression methods to assess whether potential confounding variables (e.g., age, gender, treatment status, comorbidity) impacted model performance. RESULTS We found levels of balanced accuracy of 68% across the cohort with clinically noncontributory normal EEGs (sensitivity =61%, specificity =75%, positive predictive value =55%, negative predictive value =79%, diagnostic odds ratio =4.64, area under receiver operated characteristics curve =.72). Group level analysis found no evidence suggesting any of the potential confounding variables significantly impacted the overall performance. SIGNIFICANCE These results provide evidence that the set of biomarkers could provide additional value to clinical decision-making, providing the foundation for a decision support tool that could reduce diagnostic delay and misdiagnosis rates. Future work should therefore assess the change in diagnostic yield and time to diagnosis when utilizing these biomarkers in carefully designed prospective studies.
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Affiliation(s)
- Luke Tait
- Cardiff University, Cardiff, UK
- University of Birmingham, Birmingham
| | - Lydia E Staniaszek
- University Hospitals Bristol and Weston National Health Service Foundation Trust, Bristol, UK
- Neuronostics, Bristol, UK
| | - Elizabeth Galizia
- St. George's Hospital National Health Service Foundation Trust, London, UK
| | - David Martin-Lopez
- St. George's Hospital National Health Service Foundation Trust, London, UK
- Kingston Hospital National Health Service Foundation Trust, Kingston, UK
| | - Matthew C Walker
- University College London, London, UK
- University College London Hospitals, London, UK
| | | | - Kay Meiklejohn
- Neuronostics, Bristol, UK
- University Hospital Southampton National Health Service Foundation Trust, Southampton, UK
| | - David Allen
- University Hospital Southampton National Health Service Foundation Trust, Southampton, UK
| | - Chris Price
- Royal Devon and Exeter National Health Service Foundation Trust, Exeter, UK
| | - Sophie Georgiou
- Royal Devon and Exeter National Health Service Foundation Trust, Exeter, UK
| | - Manny Bagary
- Birmingham and Solihull Mental Health National Health Service Foundation Trust, Birmingham, UK
| | - Sakh Khalsa
- Birmingham and Solihull Mental Health National Health Service Foundation Trust, Birmingham, UK
| | | | - Phil Tittensor
- Royal Wolverhampton National Health Service Trust, Wolverhampton, UK
- University of Wolverhampton, Wolverhampton, UK
| | | | | | - Rohit Shankar
- University of Plymouth, Plymouth, UK
- Cornwall Partnership National Health Service Foundation Trust, Bodmin, UK
| | - John R Terry
- University of Birmingham, Birmingham
- Neuronostics, Bristol, UK
| | - Wessel Woldman
- University of Birmingham, Birmingham
- Neuronostics, Bristol, UK
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Harrington EG, Kissack P, Terry JR, Woldman W, Junges L. Treatment effects in epilepsy: a mathematical framework for understanding response over time. FRONTIERS IN NETWORK PHYSIOLOGY 2024; 4:1308501. [PMID: 38988793 PMCID: PMC11233745 DOI: 10.3389/fnetp.2024.1308501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Accepted: 05/30/2024] [Indexed: 07/12/2024]
Abstract
Epilepsy is a neurological disorder characterized by recurrent seizures, affecting over 65 million people worldwide. Treatment typically commences with the use of anti-seizure medications, including both mono- and poly-therapy. Should these fail, more invasive therapies such as surgery, electrical stimulation and focal drug delivery are often considered in an attempt to render the person seizure free. Although a significant portion ultimately benefit from these treatment options, treatment responses often fluctuate over time. The physiological mechanisms underlying these temporal variations are poorly understood, making prognosis a significant challenge when treating epilepsy. Here we use a dynamic network model of seizure transition to understand how seizure propensity may vary over time as a consequence of changes in excitability. Through computer simulations, we explore the relationship between the impact of treatment on dynamic network properties and their vulnerability over time that permit a return to states of high seizure propensity. For small networks we show vulnerability can be fully characterised by the size of the first transitive component (FTC). For larger networks, we find measures of network efficiency, incoherence and heterogeneity (degree variance) correlate with robustness of networks to increasing excitability. These results provide a set of potential prognostic markers for therapeutic interventions in epilepsy. Such markers could be used to support the development of personalized treatment strategies, ultimately contributing to understanding of long-term seizure freedom.
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Affiliation(s)
- Elanor G. Harrington
- School of Mathematics, College of Engineering and Physical Sciences, University of Birmingham, Birmingham, United Kingdom
- Centre for Systems Modelling and Quantitative Biomedicine, University of Birmingham, Birmingham, United Kingdom
| | - Peter Kissack
- School of Mathematics, College of Engineering and Physical Sciences, University of Birmingham, Birmingham, United Kingdom
- Centre for Systems Modelling and Quantitative Biomedicine, University of Birmingham, Birmingham, United Kingdom
| | - John R. Terry
- Centre for Systems Modelling and Quantitative Biomedicine, University of Birmingham, Birmingham, United Kingdom
- Neuronostics Ltd, Engine Shed, Station Approach, Bristol, United Kingdom
| | - Wessel Woldman
- Centre for Systems Modelling and Quantitative Biomedicine, University of Birmingham, Birmingham, United Kingdom
- Neuronostics Ltd, Engine Shed, Station Approach, Bristol, United Kingdom
| | - Leandro Junges
- Centre for Systems Modelling and Quantitative Biomedicine, University of Birmingham, Birmingham, United Kingdom
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6
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Issabekov G, Matsumoto T, Hoshi H, Fukasawa K, Ichikawa S, Shigihara Y. Resting-state brain activity distinguishes patients with generalised epilepsy from others. Seizure 2024; 115:50-58. [PMID: 38183828 DOI: 10.1016/j.seizure.2024.01.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Revised: 12/14/2023] [Accepted: 01/01/2024] [Indexed: 01/08/2024] Open
Abstract
PURPOSE Epilepsy is a prevalent neurological disorder characterised by repetitive seizures. It is categorised into three types: generalised epilepsy (GE), focal epilepsy (FE), and combined generalised and focal epilepsy. Correctly subtyping the epilepsy is important to select appropriate treatments. The types are mainly determined (i.e., diagnosed) by their semiologies supported by clinical examinations, such as electroencephalography and magnetoencephalography (MEG). Although these examinations are traditionally based on visual inspections of interictal epileptic discharges (IEDs), which are not always visible, alternative analyses have been anticipated. We examined if resting-state brain activities can distinguish patients with GE, which would help us to diagnose the type of epilepsy. METHODS The 5 min resting-state brain activities acquired using MEG were obtained retrospectively from 15 patients with GE. The cortical source of the activities was estimated at each frequency band from delta to high-frequency oscillation (HFO). These estimated activities were compared with reference datasets from 133 healthy individuals and control data from 29 patients with FE. RESULTS Patients with GE showed larger theta in the occipital, alpha in the left temporal, HFO in the rostral deep regions, and smaller HFO in the caudal ventral regions. Their area under the curves of the receiver operating characteristic curves was around 0.8-0.9. The distinctive pattern was not found for data from FE. CONCLUSION Patients with GE show distinctive resting-state brain activity, which could be a potential biomarker and used complementarily to classical analysis based on the visual inspection of IEDs.
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Affiliation(s)
- Galymzhan Issabekov
- Precision Medicine Centre, Kumagaya General Hospital, Kumagaya 360-8567, Japan
| | - Takahiro Matsumoto
- Department of Neurosurgery, Kumagaya General Hospital, Kumagaya 360-8567, Japan
| | - Hideyuki Hoshi
- Precision Medicine Centre, Hokuto Hospital, Obihiro 080-0833, Japan
| | - Keisuke Fukasawa
- Clinical Laboratory, Kumagaya General Hospital, Kumagaya 360-8567, Japan
| | - Sayuri Ichikawa
- Clinical Laboratory, Kumagaya General Hospital, Kumagaya 360-8567, Japan
| | - Yoshihito Shigihara
- Precision Medicine Centre, Kumagaya General Hospital, Kumagaya 360-8567, Japan; Precision Medicine Centre, Hokuto Hospital, Obihiro 080-0833, Japan.
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7
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Faiman I, Sparks R, Winston JS, Brunnhuber F, Ciulini N, Young AH, Shotbolt P. Limited clinical validity of univariate resting-state EEG markers for classifying seizure disorders. Brain Commun 2023; 5:fcad330. [PMID: 38107505 PMCID: PMC10724050 DOI: 10.1093/braincomms/fcad330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 09/25/2023] [Accepted: 11/29/2023] [Indexed: 12/19/2023] Open
Abstract
Differentiating between epilepsy and psychogenic non-epileptic seizures presents a considerable challenge in clinical practice, resulting in frequent misdiagnosis, unnecessary treatment and long diagnostic delays. Quantitative markers extracted from resting-state EEG may reveal subtle neurophysiological differences that are diagnostically relevant. Two observational, retrospective diagnostic accuracy studies were performed to test the clinical validity of univariate resting-state EEG markers for the differential diagnosis of epilepsy and psychogenic non-epileptic seizures. Clinical EEG data were collected for 179 quasi-consecutive patients (age > 18) with a suspected diagnosis of epilepsy or psychogenic non-epileptic seizures who were medication-naïve at the time of EEG; 148 age- and gender-matched patients subsequently received a diagnosis from specialist clinicians and were included in the analyses. Study 1 is a hypothesis-driven study testing the ability of theta power and peak alpha frequency to classify people with epilepsy and people with psychogenic non-epileptic seizures, with an advanced machine learning pipeline. The next study (Study 2) is data-driven; a high number of quantitative EEG features are extracted and a similar machine learning approach as Study 1 assesses whether previously unexplored univariate EEG measures show promise as diagnostic markers. The results of Study 1 suggest that EEG markers that were previously identified as promising diagnostic indicators (i.e. theta power and peak alpha frequency) have limited clinical validity for the classification of epilepsy and psychogenic non-epileptic seizures (mean accuracy: 48%). The results of Study 2 indicate that identifying univariate markers that show good correlation with a categorical diagnostic label is challenging (mean accuracy: 45-60%). This is due to a considerable overlap in neurophysiological features between the diagnostic classes considered in this study, and to the presence of more dominant EEG dynamics such as alterations due to temporal proximity to epileptiform discharges. Markers that were identified in the context of previous epilepsy research using visually normal resting-state EEG were found to have limited clinical validity for the classification task of distinguishing between people with epilepsy and people with psychogenic non-epileptic seizures. A search for alternative diagnostic markers uncovered the challenges involved and generated recommendations for further research.
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Affiliation(s)
- Irene Faiman
- Department of Psychological Medicine, King’s College London Institute of Psychiatry Psychology and Neuroscience, London SE5 8AB, UK
| | - Rachel Sparks
- School of Biomedical Engineering & Imaging Sciences, King’s College London, London SE1 7EH, UK
| | - Joel S Winston
- Department of Basic and Clinical Neurosciences, Institute of Psychiatry, Psychology and Neuroscience, King’s College London, London SE5 8AB, UK
- Department of Clinical Neurophysiology, King’s College Hospital NHS Foundation Trust, London SE5 9RS, UK
| | - Franz Brunnhuber
- Department of Clinical Neurophysiology, King’s College Hospital NHS Foundation Trust, London SE5 9RS, UK
| | - Naima Ciulini
- Department of Clinical Neurophysiology, King’s College Hospital NHS Foundation Trust, London SE5 9RS, UK
| | - Allan H Young
- Department of Psychological Medicine, King’s College London Institute of Psychiatry Psychology and Neuroscience, London SE5 8AB, UK
- South London and Maudsley NHS Foundation Trust, Bethlem Royal Hospital, Beckenham, Kent BR3 3BX, UK
| | - Paul Shotbolt
- Department of Psychological Medicine, King’s College London Institute of Psychiatry Psychology and Neuroscience, London SE5 8AB, UK
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Belyaev M, Murugappan M, Velichko A, Korzun D. Entropy-Based Machine Learning Model for Fast Diagnosis and Monitoring of Parkinson's Disease. SENSORS (BASEL, SWITZERLAND) 2023; 23:8609. [PMID: 37896703 PMCID: PMC10610702 DOI: 10.3390/s23208609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Revised: 10/02/2023] [Accepted: 10/16/2023] [Indexed: 10/29/2023]
Abstract
This study presents the concept of a computationally efficient machine learning (ML) model for diagnosing and monitoring Parkinson's disease (PD) using rest-state EEG signals (rs-EEG) from 20 PD subjects and 20 normal control (NC) subjects at a sampling rate of 128 Hz. Based on the comparative analysis of the effectiveness of entropy calculation methods, fuzzy entropy showed the best results in diagnosing and monitoring PD using rs-EEG, with classification accuracy (ARKF) of ~99.9%. The most important frequency range of rs-EEG for PD-based diagnostics lies in the range of 0-4 Hz, and the most informative signals were mainly received from the right hemisphere of the head. It was also found that ARKF significantly decreased as the length of rs-EEG segments decreased from 1000 to 150 samples. Using a procedure for selecting the most informative features, it was possible to reduce the computational costs of classification by 11 times, while maintaining an ARKF ~99.9%. The proposed method can be used in the healthcare internet of things (H-IoT), where low-performance edge devices can implement ML sensors to enhance human resilience to PD.
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Affiliation(s)
- Maksim Belyaev
- Institute of Physics and Technology, Petrozavodsk State University, 185910 Petrozavodsk, Russia;
| | - Murugappan Murugappan
- Intelligent Signal Processing (ISP) Research Lab, Department of Electronics and Communication Engineering, Kuwait College of Science and Technology, Block 4, Kuwait City 13133, Kuwait;
- Department of Electronics and Communication Engineering, Faculty of Engineering, Vels Institute of Sciences, Technology, and Advanced Studies, Chennai 600117, India
- Centre of Excellence for Unmanned Aerial Systems (CoEUAS), Universiti Malaysia Perlis, Arau 02600, Perlis, Malaysia
| | - Andrei Velichko
- Institute of Physics and Technology, Petrozavodsk State University, 185910 Petrozavodsk, Russia;
| | - Dmitry Korzun
- Department of Computer Science, Institute of Mathematics and Information Technology, Petrozavodsk State University, 185910 Petrozavodsk, Russia;
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van de Velden D, Stier C, Kotikalapudi R, Heide EC, Garnica-Agudelo D, Focke NK. Comparison of Resting-State EEG Network Analyses With and Without Parallel MRI in Genetic Generalized Epilepsy. Brain Topogr 2023; 36:750-765. [PMID: 37354244 PMCID: PMC10415462 DOI: 10.1007/s10548-023-00977-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Accepted: 06/12/2023] [Indexed: 06/26/2023]
Abstract
Genetic generalized epilepsy (GGE) is conceptualized as a brain disorder involving distributed bilateral networks. To study these networks, simultaneous EEG-fMRI measurements can be used. However, inside-MRI EEG suffers from strong MR-related artifacts; it is not established whether EEG-based metrics in EEG-fMRI resting-state measurements are suitable for the analysis of group differences at source-level. We evaluated the impact of the inside-MR measurement condition on statistical group comparisons of EEG on source-level power and functional connectivity in patients with GGE versus healthy controls. We studied the cross-modal spatial relation of statistical group differences in seed-based FC derived from EEG and parallel fMRI. We found a significant increase in power and a frequency-specific change in functional connectivity for the inside MR-scanner compared to the outside MR-scanner condition. For power, we found reduced group difference between GGE and controls both in terms of statistical significance as well as effect size. Group differences for ImCoh remained similar both in terms of statistical significance as well as effect size. We found increased seed-based FC for GGE patients from the thalamus to the precuneus cortex region in fMRI, and in the theta band of simultaneous EEG. Our findings suggest that the analysis of EEG functional connectivity based on ImCoh is suitable for MR-EEG, and that relative group difference in a comparison of patients with GGE against controls are preserved. Spatial correspondence of seed-based FC group differences between the two modalities was found for the thalamus.
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Affiliation(s)
- Daniel van de Velden
- Clinic for Neurology, University Medical Center Göttingen, 37075, Göttingen, Germany.
| | - Christina Stier
- Clinic for Neurology, University Medical Center Göttingen, 37075, Göttingen, Germany
- Department of Neurology and Epileptology, Hertie Institute of Clinical Brain Research, University Medical Center Tübingen, University of Tübingen, 72076, Tübingen, Germany
| | - Raviteja Kotikalapudi
- Department of Neurology and Epileptology, Hertie Institute of Clinical Brain Research, University Medical Center Tübingen, University of Tübingen, 72076, Tübingen, Germany
- Clinic for Neurology, University Medical Center Essen/University Duisburg-Essen, 45147, Essen, Germany
| | - Ev-Christin Heide
- Clinic for Neurology, University Medical Center Göttingen, 37075, Göttingen, Germany
| | - David Garnica-Agudelo
- Clinic for Neurology, University Medical Center Göttingen, 37075, Göttingen, Germany
| | - Niels K Focke
- Clinic for Neurology, University Medical Center Göttingen, 37075, Göttingen, Germany.
- Department of Neurology and Epileptology, Hertie Institute of Clinical Brain Research, University Medical Center Tübingen, University of Tübingen, 72076, Tübingen, Germany.
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10
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Lemoine É, Toffa D, Pelletier-Mc Duff G, Xu AQ, Jemel M, Tessier JD, Lesage F, Nguyen DK, Bou Assi E. Machine-learning for the prediction of one-year seizure recurrence based on routine electroencephalography. Sci Rep 2023; 13:12650. [PMID: 37542101 PMCID: PMC10403587 DOI: 10.1038/s41598-023-39799-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Accepted: 07/31/2023] [Indexed: 08/06/2023] Open
Abstract
Predicting seizure recurrence risk is critical to the diagnosis and management of epilepsy. Routine electroencephalography (EEG) is a cornerstone of the estimation of seizure recurrence risk. However, EEG interpretation relies on the visual identification of interictal epileptiform discharges (IEDs) by neurologists, with limited sensitivity. Automated processing of EEG could increase its diagnostic yield and accessibility. The main objective was to develop a prediction model based on automated EEG processing to predict one-year seizure recurrence in patients undergoing routine EEG. We retrospectively selected a consecutive cohort of 517 patients undergoing routine EEG at our institution (training set) and a separate, temporally shifted cohort of 261 patients (testing set). We developed an automated processing pipeline to extract linear and non-linear features from the EEGs. We trained machine learning algorithms on multichannel EEG segments to predict one-year seizure recurrence. We evaluated the impact of IEDs and clinical confounders on performances and validated the performances on the testing set. The receiver operating characteristic area-under-the-curve for seizure recurrence after EEG in the testing set was 0.63 (95% CI 0.55-0.71). Predictions were still significantly above chance in EEGs with no IEDs. Our findings suggest that there are changes other than IEDs in the EEG signal embodying seizure propensity.
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Affiliation(s)
- Émile Lemoine
- Department of Neurosciences, Université de Montréal, Montréal, Qc, Canada
- Institute of Biomedical Engineering, École Polytechnique de Montréal, Montréal, Qc, Canada
- Centre de Recherche du CHUM (CRCHUM), Montréal, Qc, Canada
| | - Denahin Toffa
- Department of Neurosciences, Université de Montréal, Montréal, Qc, Canada
- Centre de Recherche du CHUM (CRCHUM), Montréal, Qc, Canada
| | - Geneviève Pelletier-Mc Duff
- Department of Neurosciences, Université de Montréal, Montréal, Qc, Canada
- Centre de Recherche du CHUM (CRCHUM), Montréal, Qc, Canada
| | - An Qi Xu
- Centre de Recherche du CHUM (CRCHUM), Montréal, Qc, Canada
| | - Mezen Jemel
- Department of Neurosciences, Université de Montréal, Montréal, Qc, Canada
- Centre de Recherche du CHUM (CRCHUM), Montréal, Qc, Canada
| | - Jean-Daniel Tessier
- Department of Neurosciences, Université de Montréal, Montréal, Qc, Canada
- Centre de Recherche du CHUM (CRCHUM), Montréal, Qc, Canada
| | - Frédéric Lesage
- Institute of Biomedical Engineering, École Polytechnique de Montréal, Montréal, Qc, Canada
- Centre de Recherche de l'institut de Cardiologie de Montréal, Montréal, Qc, Canada
| | - Dang K Nguyen
- Department of Neurosciences, Université de Montréal, Montréal, Qc, Canada
- Centre de Recherche du CHUM (CRCHUM), Montréal, Qc, Canada
| | - Elie Bou Assi
- Department of Neurosciences, Université de Montréal, Montréal, Qc, Canada.
- Centre de Recherche du CHUM (CRCHUM), Montréal, Qc, Canada.
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11
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Lemoine É, Neves Briard J, Rioux B, Podbielski R, Nauche B, Toffa D, Keezer M, Lesage F, Nguyen DK, Bou Assi E. Computer-assisted analysis of routine electroencephalogram to identify hidden biomarkers of epilepsy: protocol for a systematic review. BMJ Open 2023; 13:e066932. [PMID: 36693684 PMCID: PMC9884857 DOI: 10.1136/bmjopen-2022-066932] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/26/2023] Open
Abstract
INTRODUCTION The diagnosis of epilepsy frequently relies on the visual interpretation of the electroencephalogram (EEG) by a neurologist. The hallmark of epilepsy on EEG is the interictal epileptiform discharge (IED). This marker lacks sensitivity: it is only captured in a small percentage of 30 min routine EEGs in patients with epilepsy. In the past three decades, there has been growing interest in the use of computational methods to analyse the EEG without relying on the detection of IEDs, but none have made it to the clinical practice. We aim to review the diagnostic accuracy of quantitative methods applied to ambulatory EEG analysis to guide the diagnosis and management of epilepsy. METHODS AND ANALYSIS The protocol complies with the recommendations for systematic reviews of diagnostic test accuracy by Cochrane. We will search MEDLINE, EMBASE, EBM reviews, IEEE Explore along with grey literature for articles, conference papers and conference abstracts published after 1961. We will include observational studies that present a computational method to analyse the EEG for the diagnosis of epilepsy in adults or children without relying on the identification of IEDs or seizures. The reference standard is the diagnosis of epilepsy by a physician. We will report the estimated pooled sensitivity and specificity, and receiver operating characteristic area under the curve (ROC AUC) for each marker. If possible, we will perform a meta-analysis of the sensitivity and specificity and ROC AUC for each individual marker. We will assess the risk of bias using an adapted QUADAS-2 tool. We will also describe the algorithms used for signal processing, feature extraction and predictive modelling, and comment on the reproducibility of the different studies. ETHICS AND DISSEMINATION Ethical approval was not required. Findings will be disseminated through peer-reviewed publication and presented at conferences related to this field. PROSPERO REGISTRATION NUMBER CRD42022292261.
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Affiliation(s)
- Émile Lemoine
- Department of Neurosciences, University of Montreal, Montreal, Québec, Canada
- Institute of Biomedical Engineering, Ecole Polytechnique de Montreal, Montreal, Québec, Canada
| | - Joel Neves Briard
- Department of Neurosciences, University of Montreal, Montreal, Québec, Canada
- University of Montreal Hospital Centre Research Centre, Montreal, Québec, Canada
| | - Bastien Rioux
- Department of Neurosciences, University of Montreal, Montreal, Québec, Canada
- University of Montreal Hospital Centre Research Centre, Montreal, Québec, Canada
| | - Renata Podbielski
- University of Montreal Hospital Centre Research Centre, Montreal, Québec, Canada
| | - Bénédicte Nauche
- University of Montreal Hospital Centre Research Centre, Montreal, Québec, Canada
| | - Denahin Toffa
- Department of Neurosciences, University of Montreal, Montreal, Québec, Canada
- University of Montreal Hospital Centre Research Centre, Montreal, Québec, Canada
| | - Mark Keezer
- Department of Neurosciences, University of Montreal, Montreal, Québec, Canada
- Stichting Epilepsie Instellingen Nederland (SEIN), Heemstede, The Netherlands
| | - Frédéric Lesage
- Institute of Biomedical Engineering, Ecole Polytechnique de Montreal, Montreal, Québec, Canada
| | - Dang K Nguyen
- Department of Neurosciences, University of Montreal, Montreal, Québec, Canada
- University of Montreal Hospital Centre Research Centre, Montreal, Québec, Canada
| | - Elie Bou Assi
- Department of Neurosciences, University of Montreal, Montreal, Québec, Canada
- University of Montreal Hospital Centre Research Centre, Montreal, Québec, Canada
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12
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Chougale A, Vedante S, Kulkarni G, Patnawar S. Recent Progress on Biosensors for the Early Detection of Neurological Disorders. ChemistrySelect 2022. [DOI: 10.1002/slct.202203155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
Affiliation(s)
- Amit Chougale
- Department of Chemical Engineering University of Adelaide SA Australia 5000
| | - Shruti Vedante
- Department of Chemical Engineering University of Adelaide SA Australia 5000
| | - Guruprasad Kulkarni
- Department of Biotechnology Kolhapur Institute of Technology's College of Engineering Kolhapur Maharashtra India 416234
| | - Sneha Patnawar
- Department of Biotechnology Kolhapur Institute of Technology's College of Engineering Kolhapur Maharashtra India. 416234
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13
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Escobar-Ipuz F, Torres A, García-Jiménez M, Basar C, Cascón J, Mateo J. Prediction of patients with idiopathic generalized epilepsy from healthy controls using machine learning from scalp EEG recordings. Brain Res 2022; 1798:148131. [DOI: 10.1016/j.brainres.2022.148131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Revised: 10/14/2022] [Accepted: 10/23/2022] [Indexed: 11/05/2022]
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14
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Najafi T, Jaafar R, Remli R, Wan Zaidi WA. A Classification Model of EEG Signals Based on RNN-LSTM for Diagnosing Focal and Generalized Epilepsy. SENSORS (BASEL, SWITZERLAND) 2022; 22:7269. [PMID: 36236368 PMCID: PMC9571034 DOI: 10.3390/s22197269] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Revised: 09/20/2022] [Accepted: 09/20/2022] [Indexed: 06/16/2023]
Abstract
UNLABELLED Epilepsy is a chronic neurological disorder caused by abnormal neuronal activity that is diagnosed visually by analyzing electroencephalography (EEG) signals. BACKGROUND Surgical operations are the only option for epilepsy treatment when patients are refractory to treatment, which highlights the role of classifying focal and generalized epilepsy syndrome. Therefore, developing a model to be used for diagnosing focal and generalized epilepsy automatically is important. METHODS A classification model based on longitudinal bipolar montage (LB), discrete wavelet transform (DWT), feature extraction techniques, and statistical analysis in feature selection for RNN combined with long short-term memory (LSTM) is proposed in this work for identifying epilepsy. Initially, normal and epileptic LB channels were decomposed into three levels, and 15 various features were extracted. The selected features were extracted from each segment of the signals and fed into LSTM for the classification approach. RESULTS The proposed algorithm achieved a 96.1% accuracy, a 96.8% sensitivity, and a 97.4% specificity in distinguishing normal subjects from subjects with epilepsy. This optimal model was used to analyze the channels of subjects with focal and generalized epilepsy for diagnosing purposes, relying on statistical parameters. CONCLUSIONS The proposed approach is promising, as it can be used to detect epilepsy with satisfactory classification performance and diagnose focal and generalized epilepsy.
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Affiliation(s)
- Tahereh Najafi
- Department of Electrical, Electronics and Systems Engineering, Universiti Kebangsaan Malaysia, Bangi 43600, Malaysia
| | - Rosmina Jaafar
- Department of Electrical, Electronics and Systems Engineering, Universiti Kebangsaan Malaysia, Bangi 43600, Malaysia
| | - Rabani Remli
- Department of Medicine, Hospital Canselor Tuanku Muhriz, Universiti Kebangsaan Malaysia, Cheras, Kuala Lumpur 56000, Malaysia
| | - Wan Asyraf Wan Zaidi
- Department of Medicine, Hospital Canselor Tuanku Muhriz, Universiti Kebangsaan Malaysia, Cheras, Kuala Lumpur 56000, Malaysia
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15
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Hinchliffe C, Yogarajah M, Elkommos S, Tang H, Abasolo D. Entropy Measures of Electroencephalograms towards the Diagnosis of Psychogenic Non-Epileptic Seizures. ENTROPY (BASEL, SWITZERLAND) 2022; 24:1348. [PMID: 37420367 DOI: 10.3390/e24101348] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Revised: 09/13/2022] [Accepted: 09/17/2022] [Indexed: 07/09/2023]
Abstract
Psychogenic non-epileptic seizures (PNES) may resemble epileptic seizures but are not caused by epileptic activity. However, the analysis of electroencephalogram (EEG) signals with entropy algorithms could help identify patterns that differentiate PNES and epilepsy. Furthermore, the use of machine learning could reduce the current diagnosis costs by automating classification. The current study extracted the approximate sample, spectral, singular value decomposition, and Renyi entropies from interictal EEGs and electrocardiograms (ECG)s of 48 PNES and 29 epilepsy subjects in the broad, delta, theta, alpha, beta, and gamma frequency bands. Each feature-band pair was classified by a support vector machine (SVM), k-nearest neighbour (kNN), random forest (RF), and gradient boosting machine (GBM). In most cases, the broad band returned higher accuracy, gamma returned the lowest, and combining the six bands together improved classifier performance. The Renyi entropy was the best feature and returned high accuracy in every band. The highest balanced accuracy, 95.03%, was obtained by the kNN with Renyi entropy and combining all bands except broad. This analysis showed that entropy measures can differentiate between interictal PNES and epilepsy with high accuracy, and improved performances indicate that combining bands is an effective improvement for diagnosing PNES from EEGs and ECGs.
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Affiliation(s)
- Chloe Hinchliffe
- Centre for Biomedical Engineering, School of Mechanical Engineering Sciences, University of Surrey, Guildford GU2 7XH, UK
| | - Mahinda Yogarajah
- Department of Clinical and Experimental Epilepsy, Institute of Neurology, University College London, National Hospital for Neurology and Neurosurgery, University College London Hospitals, Epilepsy Society, London WC1E 6BT, UK
- Neurosciences Research Centre, St George's University of London, London SW17 0RE, UK
- Atkinson Morley Regional Neuroscience Centre, St George's Hospital, London SW17 0QT, UK
| | - Samia Elkommos
- Atkinson Morley Regional Neuroscience Centre, St George's Hospital, London SW17 0QT, UK
- School of Neuroscience, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London WC2R 2LS, UK
| | - Hongying Tang
- Department of Computer Science, University of Surrey, Guildford GU2 7XH, UK
| | - Daniel Abasolo
- Centre for Biomedical Engineering, School of Mechanical Engineering Sciences, University of Surrey, Guildford GU2 7XH, UK
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16
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Stier C, Loose M, Kotikalapudi R, Elshahabi A, Li Hegner Y, Marquetand J, Braun C, Lerche H, Focke NK. Combined electrophysiological and morphological phenotypes in patients with genetic generalized epilepsy and their healthy siblings. Epilepsia 2022; 63:1643-1657. [PMID: 35416282 DOI: 10.1111/epi.17258] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Revised: 04/11/2022] [Accepted: 04/11/2022] [Indexed: 11/27/2022]
Abstract
OBJECTIVE Genetic generalized epilepsy is characterized by aberrant neuronal dynamics and subtle structural alterations. We evaluated whether a combination of magnetic and electrical neuronal signals and cortical thickness would provide complementary information about network pathology in GGE. We also investigated if these imaging phenotypes were present in healthy siblings of the patients to test for genetic influence. METHODS In this cross-sectional study, we analyzed five minutes of resting-state data acquired using electroencephalography (EEG) and magnetoencephalography (MEG) in patients, their siblings, and controls, matched for age and sex. We computed source-reconstructed power and connectivity in six frequency bands (1-40 Hz) and cortical thickness (derived from magnetic resonance imaging (MRI)). Group differences were assessed using permutation analysis of linear models for each modality separately and jointly for all modalities using a non-parametric combination. RESULTS Patients with GGE (n = 23) had higher power than controls (n = 35) in all frequencies, with a more posterior focus in MEG than EEG. Connectivity was also increased, particularly in frontotemporal and central regions in theta (strongest in EEG) and low beta frequencies (strongest in MEG), which was eminent in the joint EEG/MEG analysis. EEG showed weaker connectivity differences in higher frequencies, possibly related to drug effects. The inclusion of cortical thickness reinforced group differences in connectivity and power. Siblings (n = 18) had functional and structural patterns intermediate between those of patients and controls. SIGNIFICANCE EEG detected increased connectivity and power in GGE similar to MEG, but with different spectral sensitivity, highlighting the importance of theta and beta oscillations. Cortical thickness reductions in GGE corresponded to functional imaging patterns. Our multimodal approach extends the understanding of the resting-state in GGE and points to genetic underpinnings of the imaging markers studied, providing new insights into the causes and consequences of epilepsy.
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Affiliation(s)
- Christina Stier
- Clinic of Neurology, University Medical Center Göttingen, Göttingen, Germany.,Department of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany
| | - Markus Loose
- Clinic of Neurology, University Medical Center Göttingen, Göttingen, Germany
| | - Raviteja Kotikalapudi
- Clinic of Neurology, University Medical Center Göttingen, Göttingen, Germany.,Department of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany.,Institute of Psychology, University of Bern, Bern, Switzerland
| | - Adham Elshahabi
- Department of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany.,Department of Neurology, University Hospital Zurich, Zurich, Switzerland
| | - Yiwen Li Hegner
- Department of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany
| | - Justus Marquetand
- Department of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany.,Department of Neural Dynamics and Magnetoencephalography, Hertie-Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany
| | - Christoph Braun
- Department of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany.,MEG-Center, University of Tübingen, Tübingen, Germany.,CIMeC, Center for Mind/Brain Sciences, University of Trento, Rovereto, Italy
| | - Holger Lerche
- Department of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany
| | - Niels K Focke
- Clinic of Neurology, University Medical Center Göttingen, Göttingen, Germany.,Department of Neurology and Epileptology, Hertie Institute for Clinical Brain Research, University of Tübingen, Tübingen, Germany
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17
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Jiang S, He X. Prediction Value of Epilepsy Secondary to Inferior Cavity Hemorrhage Based on Scalp EEG Wave Pattern in Deep Learning. JOURNAL OF HEALTHCARE ENGINEERING 2022; 2022:2084276. [PMID: 35340252 PMCID: PMC8941549 DOI: 10.1155/2022/2084276] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Accepted: 01/27/2022] [Indexed: 11/17/2022]
Abstract
Objective To search the predictive value of epilepsy secondary to acute subarachnoid hemorrhage (aSAH) based on EEG wave pattern in deep learning. Methods A total of 156 cases of secondary epilepsy with lower cavity hemorrhage in our hospital were selected and divided into the late epilepsy group and the early epilepsy group according to seizure time, and the nonseizure group and the seizure group according to seizure condition. General data of patients were collected, the EEG types of each group were analyzed, and the disease recurrence rate, treatment effect, and symptom onset time were compared. Results Rapid and slow and rapid blood flow velocity were the main abnormal manifestations of epilepsy secondary to inferior cavity hemorrhage, accounting for 33.3% and 18.6%, respectively. Compared with the seizure group, the proportion of type ii and type iii in the nonseizure group was higher, and the proportion of type ii and type iii in the early epilepsy group was higher than in the late epilepsy group (P < 0.05). The diagnostic accuracy, missed diagnosis rate, misdiagnosis rate, specificity, and sensitivity of the EEG wave pattern were 94.9%, 3.2%, 1.9%, 91.7%, and 96.2%, respectively. Compared with the early epilepsy group, the recurrence rate of type iii and type iv in the late epilepsy group was higher (P < 0.05). The effective rates of the attack group and the nonattack group were 72.7% and 97.0%, respectively. Compared with the attack group, the effective rate of the nonattack group was higher (P < 0.05). The effective rates of the early epilepsy group and the late epilepsy group were 91.7% and 85.0%, respectively. Compared with the late epilepsy group, the effective rate of the early epilepsy group was higher (P < 0.05). Compared with the early epilepsy group, the late epilepsy group had longer tonic-clonic seizures, atonic seizures, and absent seizures, and the difference between the groups was statistically significant (P < 0.05). Conclusion In aSAH secondary epilepsy disease prediction, based on indepth study of the scalp EEG wave type prediction, they play an important role, including aSAH high-risk secondary epilepsy wave types for V, III, and IV types, as well as early and late epilepsy associated with disease stage. Through the diagnosis method to predict the severity of disease, this builds a good foundation for clinical treatment. It is beneficial to improve the effective rate of treatment.
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Affiliation(s)
- Shishuang Jiang
- Department of Critical-care Medicine, Yongchuan Hospital Chongqing Medical University, Yongchuan, Chongqing 402160, China
| | - Xuenong He
- Department of Neurosurgery, Yongchuan Hospital Chongqing Medical University, Yongchuan, Chongqing 402160, China
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18
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Weighted Brain Network Analysis on Different Stages of Clinical Cognitive Decline. Bioengineering (Basel) 2022; 9:bioengineering9020062. [PMID: 35200415 PMCID: PMC8869328 DOI: 10.3390/bioengineering9020062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 01/26/2022] [Accepted: 01/29/2022] [Indexed: 11/25/2022] Open
Abstract
This study addresses brain network analysis over different clinical severity stages of cognitive dysfunction using electroencephalography (EEG). We exploit EEG data of subjective cognitive impairment (SCI) patients, mild cognitive impairment (MCI) patients and Alzheimer’s disease (AD) patients. We propose a new framework to study the topological networks with a spatiotemporal entropy measure for estimating the connectivity. Our results show that functional connectivity and graph analysis are frequency-band dependent, and alterations start at the MCI stage. In delta, the SCI group exhibited a decrease of clustering coefficient and an increase of path length compared to MCI and AD. In alpha, the opposite behavior appeared, suggesting a rapid and high efficiency in information transmission across the SCI network. Modularity analysis showed that electrodes of the same brain region were distributed over several modules, and some obtained modules in SCI were extended from anterior to posterior regions. These results demonstrate that the SCI network was more resilient to neuronal damage compared to that of MCI and even more compared to that of AD. Finally, we confirm that MCI is a transitional stage between SCI and AD, with a predominance of high-strength intrinsic connectivity, which may reflect the compensatory response to the neuronal damage occurring early in the disease process.
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19
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Tan JL, Liang ZF, Zhang R, Dong YQ, Li GH, Zhang M, Wang H, Xu N. Suppressing of Power Line Artifact From Electroencephalogram Measurements Using Sparsity in Frequency Domain. Front Neurosci 2021; 15:780373. [PMID: 34776860 PMCID: PMC8581206 DOI: 10.3389/fnins.2021.780373] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Accepted: 10/08/2021] [Indexed: 11/13/2022] Open
Abstract
Electroencephalogram (EEG) plays an important role in brain disease diagnosis and research of brain-computer interface (BCI). However, the measurements of EEG are often exposed to strong interference of power line artifact (PLA). Digital notch filters (DNFs) can be applied to remove the PLA effectively, but it also results in severe signal distortions in the time domain. To address this problem, spectrum correction (SC) based methods can be utilized. These methods estimate harmonic parameters of the PLA such that compensation signals are produced to remove the noise. In order to ensure high accuracy during harmonic parameter estimations, a novel approach is proposed in this paper. This novel approach is based on the combination of sparse representation (SR) and SC. It can deeply mine the information of PLA in the frequency domain. Firstly, a ratio-based spectrum correction (RBSC) using rectangular window is employed to make rough estimation of the harmonic parameters of PLA. Secondly, the two spectral line closest to the estimated frequency are calculated. Thirdly, the two spectral lines with high amplitudes can be utilized as input of RBSC to make finer estimations of the harmonic parameters. Finally, a compensation signal, based on the extracted harmonic parameters, is generated to suppress PLA. Numerical simulations and actual EEG signals with PLA were used to evaluate the effectiveness of the improved approach. It is verified that this approach can effectively suppress the PLA without distorting the time-domain waveform of the EEG signal.
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Affiliation(s)
- Jin-Lin Tan
- School of Aerospace Science and Technology, Xidian University, Xi'an, China.,Shaanxi Aerospace Technology Application Research Institute Co., Ltd, Xi'an, China
| | - Zhi-Feng Liang
- Shaanxi Aerospace Technology Application Research Institute Co., Ltd, Xi'an, China
| | - Rui Zhang
- Shaanxi Aerospace Technology Application Research Institute Co., Ltd, Xi'an, China
| | - You-Qiang Dong
- School of Aerospace Science and Technology, Xidian University, Xi'an, China
| | - Guang-Hui Li
- School of Aerospace Science and Technology, Xidian University, Xi'an, China
| | - Min Zhang
- School of Aerospace Science and Technology, Xidian University, Xi'an, China
| | - Hai Wang
- School of Aerospace Science and Technology, Xidian University, Xi'an, China
| | - Na Xu
- The Second Affiliated Hospital of Xiamen Medical College, Xiamen, China
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20
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Shen K, McFadden A, McIntosh AR. Signal complexity indicators of health status in clinical EEG. Sci Rep 2021; 11:20192. [PMID: 34642403 PMCID: PMC8511087 DOI: 10.1038/s41598-021-99717-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 09/29/2021] [Indexed: 11/13/2022] Open
Abstract
Brain signal variability changes across the lifespan in both health and disease, likely reflecting changes in information processing capacity related to development, aging and neurological disorders. While signal complexity, and multiscale entropy (MSE) in particular, has been proposed as a biomarker for neurological disorders, most observations of altered signal complexity have come from studies comparing patients with few to no comorbidities against healthy controls. In this study, we examined whether MSE of brain signals was distinguishable across patient groups in a large and heterogeneous set of clinical-EEG data. Using a multivariate analysis, we found unique timescale-dependent differences in MSE across various neurological disorders. We also found MSE to differentiate individuals with non-brain comorbidities, suggesting that MSE is sensitive to brain signal changes brought about by metabolic and other non-brain disorders. Such changes were not detectable in the spectral power density of brain signals. Our findings suggest that brain signal complexity may offer complementary information to spectral power about an individual's health status and is a promising avenue for clinical biomarker development.
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Affiliation(s)
- Kelly Shen
- Rotman Research Institute, Baycrest Centre, 3560 Bathurst Street, Toronto, ON, M6A 2E1, Canada.
| | - Alison McFadden
- Rotman Research Institute, Baycrest Centre, 3560 Bathurst Street, Toronto, ON, M6A 2E1, Canada
| | - Anthony R McIntosh
- Rotman Research Institute, Baycrest Centre, 3560 Bathurst Street, Toronto, ON, M6A 2E1, Canada
- University of Toronto, Toronto, Canada
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