Phylogenetic systematics and a revised generic classification of anthidiine bees (Hymenoptera: Megachilidae)

The Megachilidae (Hymenoptera, Apoidea, Apiformes) of the Democratic Republic of Congo curated at the Royal Museum for Central Africa (RMCA, Belgium)

Natural history collections are a cornerstone of entomology, and the conservation of specimens is the essential prerequisite for the development of research into systematics, biogeography, ecology, evolution and other disciplines. Yet, specimens collected during decades of entomological research conducted in less developed countries across Sub-Saharan Africa on pests, beneficial insects and insect biodiversity in general have largely been exported to be permanently preserved in developed countries, mainly in Europe and the United States of America. This is particularly true for the Democratic Republic of the Congos (DRC) diverse wild bee fauna, which has been investigated throughout the colonial period by visiting or resident entomologists and missionaries who have then transferred their collected material primarily to Belgium as part of a wider legacy of scientific exploration and colonialism. Digitizing NHC is one way to mitigate this current bias, by making samples accessible to researchers from the target post-colonial countries as well as to the wider international scientific community. In this study, we compiled and digitized 6,490 specimens records relevant to 195 wild bee species grouped in 18 genera within the biodiverse family Megachilidae, essentially from the colonial era (i.e., mostly between 19051960, with additional records up to 1978), and curated at the Royal Museum for Central Africa in Belgium. We provide a detailed catalogue of all records with updated locality and province names, including 29 species only available as type specimens. We also explore the historical patterns of diversity and distribution across DRC, and we provide a list of the research entomologists involved. This study is an important first step that uses digital technologies to democratize and repatriate important aspects of DRCs natural heritage of insect biodiversity, to stimulate more contemporary field surveys and modern taxonomic revisions, as well as to identify and characterize research gaps and biodiversity shortfalls in some of the less-explored regions of Sub-Saharan Africa.

A review of the anthidiine bees (Apoidea, Megachilidae) in Thailand

Bees of the tribe Anthidiini (Apoidea: Megachilidae) are notable pollinators consisting of resin bees, wool-carder bees, and cleptoparasitic bees. Twelve anthidiine species were historically reported in Thailand, though the taxonomic information of the group was needed revising. In this study, 165 (97♀, 68♂) anthidiine bee specimens deposited at the Chulalongkorn University Natural History Museum, Thailand, were examined with material obtained from various museum collections. Specimens were principally collected in Thailand with some from Laos and Myanmar. Here, at least eight genera and 15 species of anthidiine bees are recognized: Anthidiellum (5), Bathanthidium (1), Eoanthidium (1), Euaspis (4), Pachyanthidium (1), Pseudoanthidium (1), Stelis (1), and Trachusa (1). Dianthidiumchinensis Wu, 1962, Eoanthidiumchinensis (Wu, 1962), Eoanthidiumsemicarinatum Pasteels, 1972, and Eoanthidiumpunjabensis Gupta & Sharma, 1953 are relegated as junior synonyms of Eoanthidium (Hemidiellum) riparium (Cockerell, 1929), stat. nov. Both Anthidiellum (Pycnanthidium) latipes (Bingham, 1897) from Phang Nga and Euaspisaff.wegneri Baker, 1995 from Chumphon were identified as new records for Thailand. Trachusaaff.vietnamensis Flaminio & Quaranta, 2021 from Phitsanulok is a new record for the genus found in Thailand, whereas Pseudoanthidium (Pseudoanthidium) orientale (Bingham, 1897) is a new record for Laos. Annotated comments are provided for some taxa and identification keys for the Thai anthidiine bees is provided.

A novel and non-invasive method for DNA extraction from dry bee specimens

In recent years molecular techniques have been used on museum material as integrative support for classic taxonomy. This cumulative systematics approach is especially for rare or extinct specimens, and genetic analysis may be useful to discern information that is not possible to glean from live materials or morphology. To date, the extraction of DNA required at least a partial destruction of the specimens, which is not possible for all individuals, especially the types. In this study, we described a novel method to extract mitochondrial DNA (mtDNA) from pinned museum bee individuals to avoid any external morphological damage. This method was able to amplify the mtDNA Cytochrome C oxidase subunit I (COI) gene in bee samples collected up to 27 years ago. We tested the efficacy of this method on 72 preserved be specimens belonging to nine species among four families, it could be used on many museums’ rare and/or extinct bee species because it does not provide external morphological damages. The method could be helpful for providing ecological, taxonomic, and phylogenetic information about specimens preserved in museum collections.

Citizen science reveals current distribution, predicted habitat suitability and resource requirements of the introduced African Carder Bee Pseudoanthidium (Immanthidium) repetitum in Australia

The introduction of non-native bee species is a major driver of ecosystem change resulting in the spread of non-native weeds, alterations to plant-pollinator interactions and competition with native species for food and nesting resources. Our lack of ecological information for many non-native organisms hinders our ability to understand the impacts of species introductions. This is often compounded by the Wallacean Shortfall—a lack of adequate knowledge of a species’ distribution in geographic space. In Australia, the African carder bee (Pseudoanthidium (Immanthidium) repetitum) was first observed in 2000 and has since become one of the most common bees in some regions. Despite its rapid population increase and range expansion, little is known about the ecology or distribution of P. repetitum. In this study, we determine the flower preferences, current distribution and predicted areas at risk of future invasion of P. repetitum using opportunistic data collected from citizen science websites, social media and museum records. We found that the current distribution of P. repetitum in Australia encompasses approximately 332,000 km2 concentrated along the eastern coast. We found considerable suitable habitat outside the current distribution including biodiversity hotspots and world heritage listed natural areas. Pseudoanthidium repetitum foraged on a wide range of plants from many families and can thus be classified as a generalist forager (polylectic). Our results suggest that P. repetitum is well suited for continued expansion in coastal Australia. Our results demonstrate the effective application of opportunistic data in overcoming knowledge gaps in species ecology and modelling of introduced species distribution.

Chromosome-Level Genome Assembly of Anthidium xuezhongi Niu & Zhu, 2020 (Hymenoptera: Apoidea: Megachilidae: Anthidiini)

Anthidiini, a large bee tribe characterized by light-colored maculations, represents nearly 1,000 pollinator species, but no genomes are yet available for this tribe. Here, we report a chromosome-level genome assembly of Anthidium xuezhongi collected from the Tibetan Plateau. Using PacBio long reads and Hi-C data, we assembled a genome of 189.14 Mb with 99.94% of the assembly located in 16 chromosomes. Our assembly contains 23 scaffolds, with the scaffold N50 length of 12.53 Mb, and BUSCO completeness of 98.70% (n = 1,367). We masked 25.98 Mb (13.74%) of the assembly as repetitive elements, identified 385 noncoding RNAs, and predicted 10,820 protein-coding genes (99.20% BUSCO completeness). Gene family evolution analyses identified 9,251 gene families, of which 31 gene families experienced rapid evolution. Interspecific chromosomal variation among A. xuezhongi, Bombus terrestris, and Apis mellifera showed strong chromosomal syntenic relationships. This high-quality genome assembly is a valuable resource for evolutionary and comparative genomic analyses of bees.

The resin bee subgenus Ranthidiellum in Thailand (Megachilidae, Anthidiini): nesting biology, cleptoparasitism by Stelis, and new species

Resin bees of the subgenus Ranthidiellum, are rare and endemic to Southeast Asia. These bees are known to construct resinous entrance tubes to their nests. Here, the new species Anthidiellum (R.) phuchongensissp. nov. is described along with a description of its nest collected from Phu Chong Na Yoy National Park, Ubon Ratchathani Province, Thailand. In addition, the bee cleptoparasite, Stelis (Malanthidium) flavofuscinularsp. nov., and the male of A. (R.) ignotum Engel, 2009, are described for the first time. A key to Ranthidiellum species is also provided.

Phylogeny and generic classification of the Anthidiini bees from the Neotropical region (Hymenoptera: Apidae)

The Anthidiini is a highly diverse tribe of bees with approximately 700 described species worldwide, of which about 350 occur in the Neotropical region. However, the phylogenetic relationships within the Neotropical lineage are poorly understood and the generic limits of these clades are still controversial, with different proposals of classification. Therefore, we carried out a phylogenetic study to investigate the monophyly of Neotropical taxa, to understand the relationships among Neotropical genera, and to propose a classification congruent with the evolution of the group. We performed parsimony-based morphological analyses using a matrix of 204 characters from adults of 83 species (79 terminal taxa of Anthidiini and four outgroup taxa). The results provide strong support for the monophyly of the tribe, despite a representation biased towards the Neotropical taxa. The monophyly of a large group containing only species from Neotropical genera is also supported. The latter group is divided into six main clades, one of them composed of only cleptoparasitic taxa (Austrostelis, Hoplostelis, Melostelis and Rhynostelis). The morphological characters assembled here allowed scrutiny of the genus-level classification of the Neotropical clade and may be useful for future phylogenetic studies involving the Anthidiini from other biogeographic regions.

Molecular phylogeny, historical biogeography and revised classification of andrenine bees (Hymenoptera: Andrenidae)

The mining bee subfamily Andreninae (Hymenoptera: Andrenidae) is a widely distributed and diverse group of ground-nesting solitary bees, including numerous species known to be important pollinators. Most of the species diversity of Andreninae is concentrated in the mainly Holarctic genus Andrena, comprising ca. 1550 described species. The subfamily and especially the genus have remained relatively neglected by recent molecular phylogenetic studies, with current classifications relying largely on morphological characters. We sampled ultraconserved element (UCE) sequences from 235 taxa, including all andrenine genera and 98 out of 104 currently recognized Andrena subgenera. Using 419,858 aligned nucleotide sites from 1009 UCE loci, we present a comprehensive molecular phylogenetic analysis of the subfamily. Our analysis supports the recognition of seven distinct genera in the Andreninae: Alocandrena, Ancylandrena, Andrena, Cubiandrena, Euherbstia, Megandrena, and Orphana. Within the genus Andrena, present-day subgeneric concepts revealed high degrees of paraphyly and polyphyly, due to strong homoplasy of morphological characters, necessitating a thorough, extensive revision of the higher classification of the genus. Based on our findings, we place the subgenus Calcarandrena in synonymy with Andrena (Lepidandrena); Hyperandrena, Nemandrena, Scoliandrena, Tylandrena and Zonandrena with A. (Melandrena); Distandrena, Fumandrena and Proxiandrena with A. (Micrandrena); Carandrena with A. (Notandrena); Agandrena with A. (Plastandrena); Xiphandrena with A. (Scrapteropsis); and Platygalandrena and Poliandrena with A. (Ulandrena) (new synonymies). We additionally reestablish the groups known as Opandrena and Truncandrena as valid subgenera of Andrena. Our results also show that the MRCA of Andrena+Cubiandrena dispersed from the New World to the Palaearctic probably during the Eocene-early Oligocene, followed by 10-14 Neogene dispersal events from the Palaearctic to the Nearctic and 1-6 Neogene dispersals back into the Palaearctic, all within the genus Andrena.

Comparative Mitogenomic Analysis of Two Cuckoo Bees (Apoidea: Anthophila: Megachilidae) with Phylogenetic Implications

Bees (Hymenoptera, Apoidea and Anthophila) are distributed worldwide and considered the primary pollinators of angiosperm. Megachilidae is one of the largest families of Anthophila. In this study, two complete mitogenomes of cuckoo bees in Megachilidae, namely Coelioxys fenestrata and Euaspis polynesia, were amplified and sequenced, with a length of 17,004 bp (C. fenestrata) and 17,682 bp (E. polynesia). The obtained results show that 37 mitogenomic genes and one putative control region were conserved within Hymenoptera. Truncated stop codon T was found in the cox3 gene of E. polynesia. The secondary structure of small (rrnS) and large (rrnL) rRNA subunits contained three domains (28 helices) and five domains (44 helices) conserved within Hymenoptera, respectively. Compared with ancestral gene order, gene rearrangement events included local inversion and gene shuffling. In order to reveal the phylogenetic position of cuckoo bees, we performed phylogenetic analysis. The results supported that all families of Anthophila were monophyletic, the tribe-level relationship of Megachilidae was Osmiini + (Anthidiini + Megachilini) and Coelioxys fenestrata was clustered to the Megachile genus, which was more closely related to Megachile sculpturalis and Megachile strupigera than Euaspis polynesia.

The evolutionary history of the cellophane bee genus Colletes Latreille (Hymenoptera: Colletidae): Molecular phylogeny, biogeography and implications for a global infrageneric classification

Colletes Latreille (Hymenoptera: Colletidae) is a diverse genus with 518 valid species distributed in all biogeographic realms, except Australasia and Antarctica. Here we provide a comprehensive dated phylogeny for Colletes based on Bayesian and maximum likelihood-based analyses of DNA sequence data of six loci: 28S rDNA, cytochrome c oxidase subunit 1, elongation factor-1α copy F2, long-wavelength rhodopsin, RNA polymerase II and wingless. In total, our multilocus matrix consists of 4824 aligned base pairs for 143 species, including 112 Colletes species plus 31 outgroups (one stenotritid and a diverse array of colletids representing all subfamilies). Overall, analyses of each of the six single-locus datasets resulted in poorly resolved consensus trees with conflicting phylogenetic signal. However, our analyses of the multilocus matrix provided strong support for the monophyly of Colletes and show that it can be subdivided into five major clades. The implications of our phylogenetic results for future attempts at infrageneric classification for the Colletes of the world are discussed. We propose species groups for the Neotropical species of Colletes, the only major biogeographic realm for which no species groups have been proposed to date. Our dating analysis indicated that Colletes diverged from its sister taxon, Hemicotelles Toro and Cabezas, in the early Oligocene and that its extant lineages began diversifying only in the late Oligocene. According to our biogeographic reconstruction, Colletes originated in the Neotropics (most likely within South America) and then spread to the Nearctic very early in its evolutionary history. Geodispersal to the Old World occurred soon after colonization of the Northern Hemisphere. Lastly, the historical biogeography of Colletes is analyzed in light of available geological and palaeoenvironmental data.

Ecological filtering in scrub fragments restructures the taxonomic and functional composition of native bee assemblages

Predicting the long-term consequences of habitat alteration for the preservation of biodiversity and ecosystem function requires an understanding of how ecological filters drive taxonomic and functional biodiversity loss. Here, we test a set of predictions concerning the role of ecological filters in restructuring native bee assemblages inhabiting fragmented coastal sage scrub ecosystems in southern California, USA. In 2011 and 2012, we collected native bees in scrub habitat belonging to two treatment categories: large natural reserves and small habitat fragments embedded in an urban landscape. We compared bee assemblages in reserve and fragment sites with respect to their taxonomic and functional alpha diversity, beta diversity, assemblage composition, and mean geographical range size estimated via distribution maps compiled for this study from digitized specimen records. We found multiple lines of evidence that ecological filtering drove bee diversity loss in fragments: a disproportionate loss of functional diversity relative to taxonomic diversity, shifts in assemblage composition driven largely by the preferential extirpation of reserve-associated indicator species, and disproportionate loss of range-restricted species. However, we found no evidence of taxonomic or functional homogenization across fragment bee assemblages, suggesting that filtering was not sufficiently strong to cause a subset of functional traits (and their associated species) to dominate assemblages in fragments. Our results suggest that ecological filtering altered bee assemblages in habitat fragments, even when such fragments contained well-preserved native plant assemblages, underscoring the importance of preserving large areas of natural habitat for the conservation of bees (especially range-restricted taxa) and their associated ecological functions.

Taxonomic revision proves Trachusa pubescens (Morawitz, 1872) sensu lato to be a complex of allopatric and sympatric species in South-Eastern Europe and Western Asia (Hymenoptera, Apoidea, Anthidiini)

Trachusa pubescens (Morawitz, 1872) s. l. has a distribution extending from south-eastern Europe over Anatolia and the Caucasus to Iran and Turkmenistan, and was formerly regarded as a species with high intraspecific variation. By means of an examination of 208 specimens from all parts of the distribution area, covering structural features of the head (mandibles, clypeus), the apical terga and the genitalia, the colouration pattern as well as a morphometric analysis of 26 body measurements with multivariate statistical methods (Principal Component Analysis, Discriminant Analysis), it was possible to assign the material to five species of which two are new to science (Trachusa balcanicasp. n. and T. hakkariensissp. n.). Two taxa which had previously been described as "variations" or subspecies are elevated to species rank: T. verhoeffi (Mavromoustakis, 1955), stat. n. and T. maxima (Friese, 1931), stat. n. Additionally, some populations can be distinguished by their colouration pattern or by subtle differences in size or body shape, but these features are apparently of no taxonomic significance at the species level. Trachusa balcanica sp. n. and T. verhoeffi have distribution areas which do not overlap with any of the other members of the species group and can thus be characterised as allospecies. By contrast, the distribution areas of the other three species, T. pubescens, T. maxima and T. hakkariensis sp. n., overlap to a certain extent and they co-exist at least to some degree in sympatry. While they have been found in the same region, they have so far never been found together at exactly the same location and it is suggested that species divergence occurred in parallel with ecological differentiation. Niche partitioning such as flower preferences is a mechanism which may be invoked to explain this. Some specimens with intermediate characters were found, particularly in contact zones, and it is thought that some hybridisation may occur. A partly melanistic individual of T. balcanicasp. n. was found, which is probably the first described melanistic individual in the tribe Anthidiini.

Phylogeny, new generic-level classification, and historical biogeography of the Eucera complex (Hymenoptera: Apidae)

The longhorn bee tribe Eucerini (Hymenoptera: Apidae) is a diverse, widely distributed group of solitary bees that includes important pollinators of both wild and agricultural plants. About half of the species in the tribe are currently assigned to the genus Eucera and to a few other related genera. In this large genus complex, comprising ca. 390 species, the boundaries between genera remain ambiguous due to morphological intergradation among taxa. Using ca. 6700 aligned nucleotide sites from six gene fragments, 120 morphological characters, and more than 100 taxa, we present the first comprehensive molecular, morphological, and combined phylogenetic analyses of the 'Eucera complex'. The revised generic classification that we propose is congruent with our phylogeny and maximizes both generic stability and ease of identification. Under this new classification most generic names are synonymized under an expanded genus Eucera. Thus, Tetralonia, Peponapis, Xenoglossa, Cemolobus, and Syntrichalonia are reduced to subgeneric rank within Eucera, and Synhalonia is retained as a subgenus of Eucera. Xenoglossodes is reestablished as a valid subgenus of Eucera while Tetraloniella is synonymized with Tetralonia and Cubitalia with Eucera. In contrast, we suggest that the venusta-group of species, currently placed in the subgenus Synhalonia, should be recognized as a new genus. Our results demonstrate the need to evaluate convergent loss or gain of important diagnostic traits to minimize the use of potentially homoplasious characters when establishing classifications. Lastly, we show that the Eucera complex originated in the Nearctic region in the late Oligocene, and dispersed twice into the Old World. The first dispersal event likely occurred 24.2-16.6 mya at a base of a clade of summer-active bees restricted to warm region of the Old World, and the second 13.9-12.3 mya at the base of a clade of spring-active bees found in cooler regions of the Holarctic. Our results further highlight the role of Beringia as a climate-regulated corridor for bees.