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Pan XL, Huang L, Zeng Y, Xu CY, Liu DM, Chu Y, Qin Y, Yang JS. Synthesis of an unusual hexasaccharide repeating unit from the cell wall polysaccharide of Eubacterium saburreum strain T19. Org Chem Front 2020. [DOI: 10.1039/d0qo00704h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Eubacterium saburreum is one of the human oral pathogens and has been proved to play a significant role in the development of periodontal diseases.
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Affiliation(s)
- Xing-Ling Pan
- Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology
- Department of Chemistry of Medicinal Natural Products
- West China School of Pharmacy
- Sichuan University
| | - Lei Huang
- Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology
- Department of Chemistry of Medicinal Natural Products
- West China School of Pharmacy
- Sichuan University
| | - Yan Zeng
- Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology
- Department of Chemistry of Medicinal Natural Products
- West China School of Pharmacy
- Sichuan University
| | - Chun-Yun Xu
- Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology
- Department of Chemistry of Medicinal Natural Products
- West China School of Pharmacy
- Sichuan University
| | - Dong-Mei Liu
- Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology
- Department of Chemistry of Medicinal Natural Products
- West China School of Pharmacy
- Sichuan University
| | - Yue Chu
- Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology
- Department of Chemistry of Medicinal Natural Products
- West China School of Pharmacy
- Sichuan University
| | - Yong Qin
- Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology
- Department of Chemistry of Medicinal Natural Products
- West China School of Pharmacy
- Sichuan University
| | - Jin-Song Yang
- Laboratory of Drug-Targeting and Drug Delivery System of the Education Ministry
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Sichuan Research Center for Drug Precision Industrial Technology
- Department of Chemistry of Medicinal Natural Products
- West China School of Pharmacy
- Sichuan University
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de Leder Kremer RM, Gallo-Rodriguez C. Naturally occurring monosaccharides: properties and synthesis. Adv Carbohydr Chem Biochem 2005; 59:9-67. [PMID: 15607763 DOI: 10.1016/s0065-2318(04)59002-9] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Affiliation(s)
- Rosa M de Leder Kremer
- CIHIDECAR, Departamento de Química Orgánica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón 2, Ciudad Universitaria, 1428 Buenos Aires, Argentina
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Sato N, Nakazawa F, Ito T, Hoshino T, Hoshino E. The structure of the antigenic polysaccharide produced by Eubactrium saburreum T15. Carbohydr Res 2003; 338:923-30. [PMID: 12681915 DOI: 10.1016/s0008-6215(03)00049-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
The antigenic polysaccharide was obtained from the cell wall of Eubacterium saburreum strain T15 by trypsin digestion followed by gel permeation and ion-exchange chromatography. Its structure was determined using acid hydrolysis, methylation analysis, and 1D and 2D NMR spectroscopy. It contained L-threo-pent-2-ulose (Xul), D-fucose (Fuc), and D-glycero-D-galacto-heptose (Hep) in 2:3:3 ratio. Methylation analysis indicated an octasaccharide repeating-unit containing five branches. The 1H and 13C signals in NMR spectra of the sugar residues were assigned by COSY, HOHAHA, and HMQC 2D experiments, and the sequence of sugar residues in the repeating unit was determined by NOESY and HMBC experiments. The polysaccharide also contains two O-acetyl groups in the repeating unit, located on the Hep residue. The repeating structure can be written as: [see text for equation]. This is a novel structure in bacterial cell-wall polysaccharides from Gram-positive bacteria.
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Affiliation(s)
- Naomi Sato
- Department of Oral Health Science, Division of Oral Ecology in Health and Infection, Course for Oral Life Science, Niigata University Graduate School of Medical and Dental Sciences, Gakkocho-dori 2, Niigata 951-8514, Japan.
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Vinogradov EV, Brade H, Holst O. The structure of the O-specific polysaccharide of the lipopolysaccharide from Chromobacterium violaceum NCTC 9694. Carbohydr Res 1994; 264:313-7. [PMID: 7528643 DOI: 10.1016/s0008-6215(05)80015-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- E V Vinogradov
- Biochemische Mikrobiologie, Forschungsinstitut Borstel, Institut für Experimentelle Biologie und Medizin, FRG
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Sato N, Nakazawa F, Sato M, Hoshino E, Ito T. Structural studies of the antigenic polysaccharide of Eubacterium saburreum, strain T19. Carbohydr Res 1993; 245:105-11. [PMID: 8358741 DOI: 10.1016/0008-6215(93)80063-k] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
The antigenic polysaccharide produced by Eubacterium saburreum, strain T19, contains unusual sugars, including D-glycero-D-galacto-heptose (Hep) and D-fucose (D-Fuc). A repeating unit of the polysaccharide is composed of a linear chain of D-glycero-D-galacto-heptopyranosyl tetrasaccharide as its backbone structure, i.e., -[-->6)-beta-Hep p-(1-->3)-beta-Hep p-(1-]2-->, and a D-fucofuranosyl disaccharide as a branched group, i.e., alpha-D-Fuc f-(1-->2)-alpha-D-Fuc f-(1-->, which is linked to O-4 of one (1--6)-linked D-glycero-D-galacto-heptopyranosyl residue. The polysaccharide also contains O-acetyl groups.
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Affiliation(s)
- N Sato
- Department of Oral Microbiology, School of Dentistry, Niigata University, Japan
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Nakazawa F, Hoshino E. Immunochemical and structural characterization of the antigenic polysaccharide from Eubacterium saburreum T18. ORAL MICROBIOLOGY AND IMMUNOLOGY 1992; 7:182-6. [PMID: 1408355 DOI: 10.1111/j.1399-302x.1992.tb00533.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
An antigenic surface polysaccharide produced by Eubacterium saburreum strain T18, isolated from human dental plaque, was purified from formamide extract of whole cells. Methylation analysis, Smith degradation, optical rotation data and nuclear magnetic resonance spectra demonstrated that the purified antigen was a homopolysaccharide composed of D-glycero-D-galacto-heptose (Hep.) residues. The structure of the repeating unit in the polysaccharide was: -[----6)-[alpha-Hep.furanosyl-(1----4)]-beta-Hep.pyranosyl- (1----6)-[alpha-Hep.furanosyl-(1----2), alpha-Hep.furanosyl-(1----4)]-beta- Hep.pyranosyl-(1-)4----6)-beta-Hep.pyranosyl-(1----. No heptose residues were acetylated. Immunodiffusion reactions in agar gel suggested that the immunodeterminant of the antigenic polysaccharide was D-glycero-D-galacto-heptofuranosyl residues as branched nonreducing terminals.
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Affiliation(s)
- F Nakazawa
- School of Dentistry, Niigata University, Japan
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Affiliation(s)
- B Lindberg
- Department of Organic Chemistry, Arrhenius Laboratory, University of Stockholm, Sweden
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Nakazawa F, Ito T, Sato N, Sato M, Hoshino E. Chemical composition and immunological characterization of polysaccharide antigen from Eubacterium saburreum T18. Infect Immun 1987; 55:871-6. [PMID: 2435659 PMCID: PMC260431 DOI: 10.1128/iai.55.4.871-876.1987] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
Two types of polysaccharide were obtained from the oral microorganism Eubacterium saburreum T18 by formamide extraction and subsequent gel filtration and ion-exchange chromatography. One polysaccharide, which was composed of D-glycero-D-galacto-heptose, had antigenic activity in an immunoprecipitation reaction with rabbit anti-T18 serum due to immunoglobulin M antibodies. The second polysaccharide was composed of D-glycero-D-manno-heptose and L-rhamnose, but it did not have immunoprecipitation activity. These polysaccharide antigens were not alkali labile and differed from E. saburreum L44 and T27 antigens, which were composed of D-glycero-D-galacto-heptose.
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Shibaev VN. Biosynthesis of bacterial polysaccharide chains composed of repeating units. Adv Carbohydr Chem Biochem 1987; 44:277-339. [PMID: 3544700 DOI: 10.1016/s0065-2318(08)60080-3] [Citation(s) in RCA: 98] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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10
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Nakazawa F. Structural studies of the antigenic polysaccharide of Eubacterium saburreum, strain T17. Carbohydr Res 1985; 143:185-90. [PMID: 4084917 DOI: 10.1016/s0008-6215(00)90707-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The antigenic polysaccharide produced by Eubacterium saburreum, strain T17, is a homoglycan composed of D-glycero-D-galacto-heptose (Hep) residues having the pentasaccharide repeating-unit----6)-[alpha-Hepf-(1----4)] -beta-Hepp-(1----6)-[alpha-Hepf-(1----2), alpha-Hepf-(1----4)]-beta-Hepp-(1----. The polysaccharide does not contain O-acetyl group.
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Jansson PE, Lindberg B, Spellman M, Hofstad T, Skaug N. The cell-wall antigen from Eubacterium saburreum strain L 13, a new type of biopolymer. Carbohydr Res 1985. [DOI: 10.1016/0008-6215(85)85160-0] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Kondo W, Nakazawa F, Sato M, Ito T. Structural studies of the antigenic polysaccharide of Eubacterium saburreum, strain T27. Carbohydr Res 1983; 117:125-31. [PMID: 6883367 DOI: 10.1016/0008-6215(83)88081-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The antigenic polysaccharide produced by Eubacterium saburreum, strain T27, is a homoglycan composed of D-glycero-D-galacto-heptose (Hep) residues having a nonasaccharide repeating-unit with the structure (leads to 6)-[alpha-Hepf-(1 leads to 4)]-beta-Hepp-(1) leads to (3)6)-[alpha-Hepf-(1 leads to 2), alpha-Hepf-(1 leads to 4)]-beta-Hepp-(1 leads to. The polysaccharide contains acetyl groups linked to O-2 (except to the 2,4,6-linked heptopyranosyl residue), O-3 and O-7 of part of both heptopyranosyl and heptofuranosyl residues. The assignment of an acetyl group at O-3 of part of the terminal heptofuranosyl and 4,6-linked heptopyranosyl groups is tentative.
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Skaug N, Hofstad T. Eubacterium saburreum L13 antigen containing a ketohexose as a main sugar constituent. Infect Immun 1983; 39:179-83. [PMID: 6822412 PMCID: PMC347922 DOI: 10.1128/iai.39.1.179-183.1983] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Abstract
A periodate-resistant antigen (PS L13) which contained ketohexose and glucose was isolated from the oral microorganism Eubacterium saburreum L13 by trypsin digestion and subsequent gel filtration and ion-exchange chromatography. The ketohexose reacted as fructose would in colorimetric and chromatographic analyses, but not in gas-liquid chromatography. Rabbit antiserum to E. saburreum L13 agglutinated the bacteria and contained precipitins of the immunoglobulin G class specific for PS L13.
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Hoffman J, Lindberg B, Skaug N, Hofstad T. Structural studies of the Eubacterium saburreum strain O 2 antigen. Carbohydr Res 1980; 84:181-3. [PMID: 7417964 DOI: 10.1016/s0008-6215(00)85442-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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Kondo W, Nakazawa F, Ito T. Isolation and identification of 3,6-dideoxy-3-(L-glyceroyl-amino)-D-glucose. a constituent of the antigenic polysaccharide of Eubacterium saburreum, strain V5. Carbohydr Res 1980; 83:129-34. [PMID: 7407797 DOI: 10.1016/s0008-6215(00)85372-0] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
3,6-Dideoxy-3-(L-glyceroylamino)-D-glucose has been identified, for the first time, as a sugar component of the antigenic polysaccharide of Eubacterium saburreum strain V5, principally by n.m.r. and mass spectrometry.
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Skaug N, Hofstad T. Immunochemical characterization of a polysaccharide antigen isolated from the oral microorganismEubacterium saburreum, strain 02/725. Curr Microbiol 1979. [DOI: 10.1007/bf02602879] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Kondo W, Sato N, Ito T. Chemical structure of the polysaccharide antigen of Eubacterium saburreum, strain O2. Carbohydr Res 1979; 70:117-23. [PMID: 427834 DOI: 10.1016/s0008-6215(00)83275-9] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The polysaccharide antigen produced by Eubacterium saburreum, strain O2, is composed of (1 leads to 6)-linked beta-D-glycero-D-galacto-heptopyranosyl residues, all of which are substituted with 6-deoxy-alpha-D-altro-heptofuranosyl groups at O-3.
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Hoffman J, Lindberg B, Hofstad T, Skaug N. Structural studies of the polysaccharide antigen of Eubacterium saburreum, Strain L 32. Carbohydr Res 1978. [DOI: 10.1016/s0008-6215(00)83239-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Hoffman J, Lindberg B, Hofstad T, Lygre H. Structural studies of the polysaccharide antigen of Eubacterium soburreum, strain L. 452. Carbohydr Res 1977; 58:439-42. [PMID: 912694 DOI: 10.1016/s0008-6215(00)84370-0] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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Hofstad T, Lygre H. Composition and antigenic properties of a surface polysaccharide isolated from Eubacterium saburreum, strain L452. ACTA PATHOLOGICA ET MICROBIOLOGICA SCANDINAVICA. SECTION B, MICROBIOLOGY 1977; 85B:14-7. [PMID: 65901 DOI: 10.1111/j.1699-0463.1977.tb01669.x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Hoffman J, Lindberg B, Lönngren J. Structural studies of the polysaccharide antigen of Eubacterium saburreum, strain 49. Carbohydr Res 1976; 47:261-7. [PMID: 1268882 DOI: 10.1016/s0008-6215(00)84191-9] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
The polysaccharide antigen produced by Eubacterium saburreum, strain L 49, is composed of D-glycero-D-galacto-heptose and a new sugar, tentatively identified as 6-deoxy-D-altro-heptose. It contains chains of alternating (1 leads to 3)- and (1 leads to 6)- linked beta-D-glycero-D-galacto-heptopyranosyl residues, the latter being substituted with 6-deoxy-alpha-heptofuranosyl groups at O-3. The polysaccharide further contains 0-acetyl groups, linked to O-7 of part of the heptosyl residues and to O-2 of part of the 6-deoxyheptosyl groups.
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Hofstad T. Immunochemistry of a cell wall polysaccharide isolated from Eubacterium saburreum, strain L49. ACTA PATHOLOGICA ET MICROBIOLOGICA SCANDINAVICA. SECTION B, MICROBIOLOGY 1975; 83:471-6. [PMID: 1237216 DOI: 10.1111/j.1699-0463.1975.tb00127.x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
A polymer isolated from E. saburreum strain L49 contained O-acetylated glycero-galacto-heptose as the main constituent, and in addition an unknown aldose. The polymer was located at the outer part of the bacterial cell wall. The polymer reacted with antiserum to L49 microorganisms by precipitation and complement fixation. Two antigenic specificities were detected, one of which was destroyed by de-acetylation. The rabbit antibodies to both specificities were low-molecular-weight antibodies.
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