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An improved method for galactosyl oligosaccharide characterization. J Chromatogr B Analyt Technol Biomed Life Sci 2021; 1184:122967. [PMID: 34649174 DOI: 10.1016/j.jchromb.2021.122967] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Revised: 09/08/2021] [Accepted: 09/29/2021] [Indexed: 11/24/2022]
Abstract
Due to beneficial effects of galactosyl oligosaccharides (GOS) on digestive and immune health, their characterization has become increasingly important. This is especially so as GOS are synthesized enzymatically and contain oligosaccharides of different sizes and linkages. High performance anion exchange chromatography with pulsed amperometric detection (HPAE-PAD) is widely used for GOS characterization. With its high resolving power, it can separate structural isomers. Here we present a significant improvement to currently used methods. Our approach combines high resolution HPAE separation on a CarboPac PA300 column with 4 µm particle size with PAD and Orbitrap mass spectrometry (MS) detections to provide in-depth information on GOS composition. Oligosaccharide resolution, especially in the disaccharide region, is significantly improved and can be routinely achieved. Improvement in technology to remove sodium before MS results in minimal peak dispersion, allowing GOS degrees of polymerization 2 to 6 to be identified based on mass spectra obtained from intact oligosaccharides and confirmed using fragmentation patterns observed in MS/MS data. Combining HPAE with MS led to identification of 28 oligosaccharides in a commercial GOS sample. We attempted to correlate oligosaccharide structure with observed elution behavior. To our knowledge this is first such attempt and can form a basis for a comprehensive structure vs HPAE elution behavior database.
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Mechelke M, Herlet J, Benz JP, Schwarz WH, Zverlov VV, Liebl W, Kornberger P. HPAEC-PAD for oligosaccharide analysis—novel insights into analyte sensitivity and response stability. Anal Bioanal Chem 2017; 409:7169-7181. [DOI: 10.1007/s00216-017-0678-y] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2017] [Revised: 09/21/2017] [Accepted: 09/26/2017] [Indexed: 01/08/2023]
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3
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Hu Y, Winter V, Chen XY, Gänzle MG. Effect of acceptor carbohydrates on oligosaccharide and polysaccharide synthesis by dextransucrase DsrM from Weissella cibaria. Food Res Int 2017; 99:603-611. [DOI: 10.1016/j.foodres.2017.06.026] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2017] [Revised: 06/08/2017] [Accepted: 06/17/2017] [Indexed: 01/10/2023]
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Detecting Adulterated Commercial Sweet Sorghum Syrups with Ion Chromatography Oligosaccharide Fingerprint Profiles. SEPARATIONS 2016. [DOI: 10.3390/separations3030020] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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6
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Eggleston G, Borges E. Multiple applications of ion chromatography oligosaccharide fingerprint profiles to solve a variety of sugar and sugar-biofuel industry problems. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2015; 63:2841-2851. [PMID: 25708094 DOI: 10.1021/jf506370s] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Sugar crops contain a broad variety of carbohydrates used for human consumption and the production of biofuels and bioproducts. Ion chromatography with integrated pulsed amperometric detection (IC-IPAD) can be used to simultaneously detect mono-, di-, and oligosaccharides, oligosaccharide isomers, mannitol, and ethanol in complex matrices from sugar crops. By utilizing a strong NaOH/NaOAc gradient method over 45 min, oligosaccharides of at least 2-12 dp can be detected. Fingerprint IC oligosaccharide profiles are extremely selective, sensitive, and reliable and can detect deterioration product metabolites from as low as 100 colony-forming units/mL lactic acid bacteria. The IC fingerprints can also be used to (i) monitor freeze deterioration, (ii) optimize harvesting methods and cut-to-crush times, (iii) differentiate between white refined sugar from sugar cane and from sugar beets, (iv) verify the activities of carbohydrate enzymes, (v) select yeasts for ethanol fermentations, and (vi) isolate and diagnose infections and processing problems in sugar factories.
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Affiliation(s)
- Gillian Eggleston
- †Southern Regional Research Center, Agricultural Research Service, U.S. Department of Agriculture, 1100 Robert E. Lee Boulevard, New Orleans, Louisiana 70124, United States
| | - Eduardo Borges
- §Fermentec Ltda., Av. Antônia Pazzinato Sturion 1155, Piracicaba, Brazil 13420 640
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Kazłowski B, Ko YT. Reaction of phosphorylase-a with α-d-glucose 1-phosphate and maltodextrin acceptors to give products with degree of polymerization 6–89. Carbohydr Polym 2014; 106:209-16. [DOI: 10.1016/j.carbpol.2014.01.101] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2013] [Revised: 01/29/2014] [Accepted: 01/31/2014] [Indexed: 11/30/2022]
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8
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Rivière A, Eeltink S, Pierlot C, Balzarini T, Moens F, Selak M, De Vuyst L. Development of an ion-exchange chromatography method for monitoring the degradation of prebiotic arabinoxylan-oligosaccharides in a complex fermentation medium. Anal Chem 2013; 85:4982-90. [PMID: 23541153 DOI: 10.1021/ac400187f] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Arabinoxylan-oligosaccharides (AXOS) are a new class of prebiotics with promising health-promoting characteristics. However, the mechanism by which bacteria break down these compounds in the colon is still uncharacterized, due to their structural complexity. A new analytical method that offers structural information was developed to characterize AXOS degradation during fermentation. The method was based on the simultaneous determination of arabinose, xylose, xylo-oligosaccharides (XOS), and AXOS by applying high-performance anion-exchange chromatography with pulsed amperometric detection. To study the structural features of AXOS in solution without the use of spectroscopic techniques or standards, enzymatic-based reference degradation chromatograms were generated based on enzymes with known specificity. The new method for fingerprinting showed to be a powerful and fast tool to study AXOS degradation with high repeatability with respect to peak area, peak width at half height, and retention time (respective relative standard deviations of ≤3.1%, 2.8%, and 0.8%). This method was successfully applied to study the degradation kinetics of AXOS in a complex fermentation medium by Bifidobacterium longum LMG 11047. The results showed that this strain could use both the arabinose side chains and xylose backbones up to xylotetraose. The characterization of the degradation abilities of AXOS by colon bacteria will allow a better understanding of the beneficial effects of these prebiotics. Furthermore, if the appropriate enzymes are available to design the reference degradation chromatograms, this new method for the qualitative fingerprinting of AXOS breakdown can also be applied for the breakdown of other complex oligosaccharides and polysaccharides.
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Affiliation(s)
- Audrey Rivière
- Research Group of Industrial Microbiology and Food Biotechnology, Vrije Universiteit Brussel, Brussels, Belgium
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9
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Rakete S, Glomb MA. A novel approach for the quantitation of carbohydrates in mash, wort, and beer with RP-HPLC using 1-naphthylamine for precolumn derivatization. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2013; 61:3828-3833. [PMID: 23578308 DOI: 10.1021/jf400463r] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
A novel universal method for the determination of reducing mono-, di-, and oligosaccharides in complex matrices on RP-HPLC using 1-naphthylamine for precolumn derivatization with sodium cyanoborhydride was established to study changes in the carbohydrate profile during beer brewing. Fluorescence and mass spectrometric detection enabled very sensitive analyses of beer-relevant carbohydrates. Mass spectrometry additionally allowed the identification of the molecular weight and thereby the degree of polymerization of unknown carbohydrates. Thus, carbohydrates with up to 16 glucose units were detected. Comparison demonstrated that the novel method was superior to fluorophore-assisted carbohydrate electrophoresis (FACE). The results proved the HPLC method clearly to be more powerful in regard to sensitivity and resolution. Analogous to FACE, this method was designated fluorophore-assisted carbohydrate HPLC (FAC-HPLC).
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Affiliation(s)
- Stefan Rakete
- Institute of Chemistry, Food Chemistry, Martin-Luther-University Halle-Wittenberg , Kurt-Mothes-Straße 2, 06120 Halle/Saale, Germany
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Goffin D, Delzenne N, Blecker C, Hanon E, Deroanne C, Paquot M. Will isomalto-oligosaccharides, a well-established functional food in Asia, break through the European and American market? The status of knowledge on these prebiotics. Crit Rev Food Sci Nutr 2011; 51:394-409. [PMID: 21491266 DOI: 10.1080/10408391003628955] [Citation(s) in RCA: 87] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
This critical review article presents the current state of knowledge on isomalto-oligosaccharides, some well known functional oligosaccharides in Asia, to evaluate their potential as emergent prebiotics in the American and European functional food market. It includes first a unique inventory of the different families of compounds which have been considered as IMOs and their specific structure. A description has been given of the different production methods including the involved enzymes and their specific activities, the substrates, and the types of IMOs produced. Considering the structural complexity of IMO products, specific characterization methods are described, as well as purification methods which enable the body to get rid of digestible oligosaccharides. Finally, an extensive review of their techno-functional and nutritional properties enables placing IMOs inside the growing prebiotic market. This review is of particular interest considering that IMO commercialization in America and Europe is a topical subject due to the recent submission by Bioneutra Inc. (Canada) of a novel food file to the UK Food Standards Agency, as well as several patents for IMO production.
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Affiliation(s)
- Dorothee Goffin
- Department of Industrial Biological Chemistry, University of Liege - Gembloux Agro-Bio Tech, Passage des D´eport´es, 2, B-5030 Gembloux, Belgium.
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de Medina-Redondo M, Arnáiz-Pita Y, Fontaine T, del Rey F, Latgé JP, de Aldana CRV. The β-1,3-glucanosyltransferase gas4p is essential for ascospore wall maturation and spore viability in Schizosaccharomyces pombe. Mol Microbiol 2008; 68:1283-99. [DOI: 10.1111/j.1365-2958.2008.06233.x] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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12
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Enzymatic and chemical degradation of curdlan targeting the production of β-(1→3) oligoglucans. Carbohydr Polym 2008. [DOI: 10.1016/j.carbpol.2007.05.042] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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13
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Abballe F, Toppazzini M, Campa C, Uggeri F, Paoletti S. Study of molar response of dextrans in electrochemical detection. J Chromatogr A 2007; 1149:38-45. [PMID: 17188282 DOI: 10.1016/j.chroma.2006.11.086] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2006] [Revised: 11/24/2006] [Accepted: 11/28/2006] [Indexed: 10/23/2022]
Abstract
In this work, a methodological approach is reported, aimed at assessing the electrochemical response of some model gluco-oligosaccharides (dextrans). Such strategy is based on the complementary use of both anion-exchange chromatography with pulsed amperometric detection (HPAEC-PAD) and capillary zone electrophoresis coupled with UV detection (CZE-UV). Unlike HPAEC-PAD, CZE-UV required derivatization with a chromophoric dye (i.e., 8-aminonaphtalene-1,3,6-trisulphonic acid, ANTS) to enhance UV response and separation selectivity. From the comparison between chromophore response and PAD signal, the reliability of HPAEC-PAD for quantitative evaluation of dextran mixtures containing mainly oligomers with polymerization degree (DP) up to 18 could be proved, due to the fairly constant molar response. For higher DPs (up to 41), a maximum in the trend of the molar responses was observed followed by a steep decrease for DPs higher than about 30-35; indeed, an underestimation of weight-average molecular weight of dextran mixtures containing such oligomers was noticed.
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Guraya HS, James C, Champagne ET. EVALUATION OF DEBRANCHED RICE STARCH SAMPLE PREPARATION METHODS FOR ANION-EXCHANGE CHROMATOGRAPHY WITH PULSED AMPEROMETRIC DETECTOR. J LIQ CHROMATOGR R T 2007. [DOI: 10.1081/jlc-100105142] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Harmeet S. Guraya
- a USDA, ARS, Southern Regional Research Center , P. O. Box 19687, New Orleans, LA, 70179, U.S.A
| | - Charles James
- a USDA, ARS, Southern Regional Research Center , P. O. Box 19687, New Orleans, LA, 70179, U.S.A
| | - Elaine T. Champagne
- a USDA, ARS, Southern Regional Research Center , P. O. Box 19687, New Orleans, LA, 70179, U.S.A
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Mouyna I, Morelle W, Vai M, Monod M, Léchenne B, Fontaine T, Beauvais A, Sarfati J, Prévost MC, Henry C, Latgé JP. Deletion of GEL2 encoding for a beta(1-3)glucanosyltransferase affects morphogenesis and virulence in Aspergillus fumigatus. Mol Microbiol 2005; 56:1675-88. [PMID: 15916615 DOI: 10.1111/j.1365-2958.2005.04654.x] [Citation(s) in RCA: 123] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The first fungal glycosylphosphatidylinositol anchored beta(1-3)glucanosyltranferase (Gel1p) has been described in Aspergillus fumigatus and its encoding gene GEL1 identified. Glycosylphosphatidylinositol-anchored glucanosyltransferases play an active role in the biosynthesis of the fungal cell wall. We characterize here GEL2, a homologue of GEL1. Both homologues share common characteristics: (i) GEL1 and GEL2 are constitutively expressed during over a range of growth conditions; (ii) Gel2p is also a putative GPI-anchored protein and shares the same beta(1-3)glucanosyltransferase activity as Gel1p and (iii) GEL2, like GEL1, is able to complement the Deltagas1 deletion in Saccharomyces cerevisiae confirming that Gelp and Gasp have the same enzymatic activity. However, disruption of GEL1 did not result in a phenotype whereas a Deltagel2 mutant and the double mutant Deltagel1Deltagel2 exhibit slower growth, abnormal conidiogenesis, and an altered cell wall composition. In addition, the Deltagel2 and the Deltagel1Deltagel2 mutant have reduced virulence in a murine model of invasive aspergillosis. These data suggest for the first time that beta(1-3)glucanosyltransferase activity is required for both morphogenesis and virulence in A. fumigatus.
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Affiliation(s)
- Isabelle Mouyna
- Institut Pasteur, Unité des Aspergillus, 25 rue du Docteur Roux, 75724 Paris cedex 15, France.
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16
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Dekker N, Speijer D, Grün CH, van den Berg M, de Haan A, Hochstenbach F. Role of the alpha-glucanase Agn1p in fission-yeast cell separation. Mol Biol Cell 2004; 15:3903-14. [PMID: 15194814 PMCID: PMC491845 DOI: 10.1091/mbc.e04-04-0319] [Citation(s) in RCA: 97] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2004] [Revised: 05/28/2004] [Accepted: 06/01/2004] [Indexed: 11/11/2022] Open
Abstract
Cell division in the fission yeast Schizosaccharomyces pombe yields two equal-sized daughter cells. Medial fission is achieved by deposition of a primary septum flanked by two secondary septa within the dividing cell. During the final step of cell division, cell separation, the primary septum is hydrolyzed by an endo-(1,3)-beta-glucanase, Eng1p. We reasoned that the cell wall material surrounding the septum, referred to here as the septum edging, also must be hydrolyzed before full separation of the daughter cells can occur. Because the septum edging contains (1,3)-alpha-glucan, we investigated the cellular functions of the putative (1,3)-alpha-glucanases Agn1p and Agn2p. Whereas agn2 deletion results in a defect in endolysis of the ascus wall, deletion of agn1 leads to clumped cells that remained attached to each other by septum-edging material. Purified Agn1p hydrolyzes (1,3)-alpha-glucan predominantly into pentasaccharides, indicating an endo-catalytic mode of hydrolysis. Furthermore, we show that the transcription factors Sep1p and Ace2p regulate both eng1 and agn1 expression in a cell cycle-dependent manner. We propose that Agn1p acts in concert with Eng1p to achieve efficient cell separation, thereby exposing the secondary septa as the new ends of the daughter cells.
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Affiliation(s)
- Nick Dekker
- Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands
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Campa C, Oust A, Skjåk-Braek G, Paulsen BS, Paoletti S, Christensen BE, Ballance S. Determination of average degree of polymerisation and distribution of oligosaccharides in a partially acid-hydrolysed homopolysaccharide: A comparison of four experimental methods applied to mannuronan. J Chromatogr A 2004; 1026:271-81. [PMID: 14763754 DOI: 10.1016/j.chroma.2003.11.045] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
The average degree of polymerisation (DP) and distribution of oligosaccharides in partially acid hydrolysed mannuronans were quantitatively evaluated by 1H NMR, electrospray ionisation mass spectrometry (ESI-MS), micellar electrokinetic capillary chromatography with UV detection (MEKC-UV), and high-pressure anion-exchange chromatography with pulsed amperometric detection (HPAEC-PAD). Our investigation shows that 1H NMR, MEKC-UV and, in particular, HPAEC-PAD can be used as quantitative tools to aid the investigation of polysaccharide structure, function and synthesis. For the latter two techniques, especially, this represents a significant new development as it enables calculation of the quantity of individual oligomers of nominal DP by direct analysis of a defined oligomer mixture. Appropriate statistical averages of number and weight distributions were also calculated and found to fit very well to predicted Kuhn distributions that assume random depolymerisation.
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Affiliation(s)
- Cristiana Campa
- Department of Biochemistry, Biophysics and Macromolecular Chemistry University of Trieste, 1-34127 Trieste, Italy
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Matsuki J, Yasui T, Kohyama K, Sasaki T. Effects of Environmental Temperature on Structure and Gelatinization Properties of Wheat Starch. Cereal Chem 2003. [DOI: 10.1094/cchem.2003.80.4.476] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Junko Matsuki
- National Food Research Institute (NFRI), Tsukuba, Ibaraki 305-8642, Japan
- Corresponding author. Phone number: +81-298-38-8132. Fax number: +81-298-38-8122. E-mail:
| | - Takeshi Yasui
- National Agriculture Research Center for Western Region (WeNARC), Fukuyama, Hiroshima 721-8514, Japan
| | - Kaoru Kohyama
- National Food Research Institute (NFRI), Tsukuba, Ibaraki 305-8642, Japan
| | - Tomoko Sasaki
- National Food Research Institute (NFRI), Tsukuba, Ibaraki 305-8642, Japan
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White DR, Hudson P, Adamson JT. Dextrin characterization by high-performance anion-exchange chromatography--pulsed amperometric detection and size-exclusion chromatography--multi-angle light scattering--refractive index detection. J Chromatogr A 2003; 997:79-85. [PMID: 12830879 DOI: 10.1016/s0021-9673(03)00626-5] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
Starch hydrolysis products, or dextrins, are widely used throughout the food industry for their functional properties. Dextrins are saccharide polymers linked primarily by alpha-(1 --> 4) D-glucose units and are prepared by partial hydrolysis of starch. Hydrolysis can be accomplished by the use of acid, enzymes, or by a combination of both. The hydrolysis products are typically characterized by the "dextrose equivalent" (DE), which refers to the total reducing power of all sugars present relative to glucose. While the DE gives the supplier and buyer a rough guide to the bulk properties of the material, the physiochemical properties of dextrins are dependent on the overall oligosaccharide profile. High-performance anion-exchange chromatography (HPAEC) with pulsed amperometric detection and size-exclusion chromatography (SEC) with multi-angle light-scattering and refractive index detection were used to characterize dextrins from commercial sources. HPAEC was used to acquire the oligosaccharide profile, and SEC to obtain an overall molar mass distribution. These methods in combination extended our understanding of the relationship between oligosaccharide profile, DE, and the hydrolysis process. Data from the two techniques enabled a method for estimating the DE that gave results in reasonable agreement with the accepted titration method.
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Affiliation(s)
- D Richard White
- Procter and Gamble Company, Snacks and Beverage Analytical and Microbiology Department, Winton Hill Technical Center, 6210 Center Hill Avenue, Cincinnati, OH 45224, USA.
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Gelders GG, Bijnens L, Loosveld AM, Vidts A, Delcour JA. Fractionation of starch hydrolysates into dextrins with narrow molecular mass distribution and their detection by high-performance anion-exchange chromatography with pulsed amperometric detection. J Chromatogr A 2003; 992:75-83. [PMID: 12735464 DOI: 10.1016/s0021-9673(03)00313-3] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
Low levels of high-molecular-mass dextrins in starch hydrolysates can be detected by high-performance anion-exchange chromatography with pulsed amperometric detection in spite of their low responses by dialysis of the starch hydrolysate and fractionation of the resulting adialysate with ethanol (final concentration 30-80% at 6 degrees C). In doing so, dextrin fractions with a relatively narrow molecular mass distribution were obtained.
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Affiliation(s)
- Greta G Gelders
- Laboratory of Food Chemistry, Katholieke Universiteit Leuven, Kasteelpark Arenberg 20, B-3001 Leuven, Belgium.
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Zhang Y, Lee Y. Chapter 6 High-performance anion-exchange chromatography of carbohydrates on pellicular resin columns. JOURNAL OF CHROMATOGRAPHY LIBRARY 2002:207-250. [DOI: 10.1016/s0301-4770(02)80031-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2025]
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Chapter 25 Pulsed electrochemical detection of carbohydrates at noble metal electrodes following liquid chromatographic and electrophoretic separation. ACTA ACUST UNITED AC 2002. [DOI: 10.1016/s0301-4770(02)80050-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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23
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Deconinck TJ, Ciza A, Sinnaeve GM, Laloux JT, Thonart P. High-performance anion-exchange chromatography DAD as a tool for the identification and quantification of oligogalacturonic acids in pectin depolymerisation. Carbohydr Res 2000; 329:907-11. [PMID: 11125836 DOI: 10.1016/s0008-6215(00)00253-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
High-performance anion-exchange chromatography (HPAEC) coupled with a diode array detector (DAD) was used to identify and quantify oligogalacturonic acid components in pectins. Purified pectin lyase and polygalacturonase were used to generate unsaturated and saturated oligomers from pectins and sodium polygalacturonate, respectively. This method resulted in a good separation of saturated and unsaturated oligomers up to DP 13. It allowed us to follow polygalacturonase and pectate lyase depolymerisation pathways simultaneously.
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Affiliation(s)
- T J Deconinck
- Département Qualité, Centre de Recherches Agronomiques de Gembloux, Belgium.
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24
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Mouyna I, Fontaine T, Vai M, Monod M, Fonzi WA, Diaquin M, Popolo L, Hartland RP, Latgé JP. Glycosylphosphatidylinositol-anchored glucanosyltransferases play an active role in the biosynthesis of the fungal cell wall. J Biol Chem 2000; 275:14882-9. [PMID: 10809732 DOI: 10.1074/jbc.275.20.14882] [Citation(s) in RCA: 279] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
A novel 1,3-beta-glucanosyltransferase isolated from the cell wall of Aspergillus fumigatus was recently characterized. This enzyme splits internally a 1,3-beta-glucan molecule and transfers the newly generated reducing end to the non-reducing end of another 1, 3-beta-glucan molecule forming a 1,3-beta linkage, resulting in the elongation of 1,3-beta-glucan chains. The GEL1 gene encoding this enzyme was cloned and sequenced. The predicted amino acid sequence of Gel1p was homologous to several yeast protein families encoded by GAS of Saccharomyces cerevisiae, PHR of Candida albicans, and EPD of Candida maltosa. Although the expression of these genes is required for correct morphogenesis in yeast, the biochemical function of the encoded proteins was unknown. The biochemical assays performed on purified recombinant Gas1p, Phr1p, and Phr2p showed that these proteins have a 1,3-beta-glucanosyltransferase activity similar to that of Gel1p. Biochemical data and sequence analysis have shown that Gel1p is attached to the membrane through a glycosylphosphatidylinositol in a similar manner as the yeast homologous proteins. The activity has been also detected in membrane preparations, showing that this 1,3-beta-glucanosyltransferase is indeed active in vivo. Our results show that transglycosidases anchored to the plasma membrane via glycosylphosphatidylinositols can play an active role in fungal cell wall synthesis.
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Affiliation(s)
- I Mouyna
- Institut Pasteur, Laboratoire des Aspergillus, 25 Rue du Docteur Roux, 75724 Paris, Cedex 15, France.
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25
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Schneider IC, Rhamy PJ, Fink-Winter RJ, Reilly PJ. High-performance anion-exchange chromatography of sugar and glycerol phosphates on quaternary ammonium resins. Carbohydr Res 1999. [DOI: 10.1016/s0008-6215(99)00210-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Koizumi K, Sanbe H, Kubota Y, Terada Y, Takaha T. Isolation and characterization of cyclic alpha-(1-->4)-glucans having degrees of polymerization 9-31 and their quantitative analysis by high-performance anion-exchange chromatography with pulsed amperometric detection. J Chromatogr A 1999; 852:407-16. [PMID: 10481979 DOI: 10.1016/s0021-9673(99)00643-3] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Abstract
Cyclic alpha-(1-->4)-glucans with degrees of polymerization (DPs) 9-31 were isolated from a mixture of cyclization products formed in the early stage of the action of cyclodextrin glucanotransferase (CGTase) on synthetic amylose, and characterized by matrix-assisted laser desorption ionization time-of-flight MS, 13C-NMR and HPLC of their partial acid hydrolyzates. High-performance anion-exchange chromatography (HPAEC) with pulsed amperometric detection for an accurate estimation of cyclic alpha-(1-->4)-glucans was developed using those isolate glucans as quantification standards, and by HPAEC, the time course of the cyclization reaction of CGTase from an alkalophilic Bacillus sp. A2-5a on synthetic amylose was determined.
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Affiliation(s)
- K Koizumi
- School of Pharmaceutical Sciences, Mukogawa Women's University, Nishinomiya, Japan
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27
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Zalyalieva SV, Kabulov BD, Akhundzhanov KA, Rashidova SS. Liquid chromatography of polysaccharides. Chem Nat Compd 1999. [DOI: 10.1007/bf02238201] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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28
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Landberg E, Lundblad A, Påhlsson P. Temperature effects in high-performance anion-exchange chromatography of oligosaccharides. J Chromatogr A 1998; 814:97-104. [PMID: 9718689 DOI: 10.1016/s0021-9673(98)00381-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
High-performance anion-exchange chromatography (HPAEC) with pulsed amperometric detection has been widely used for analysis of mono-, oligo- and polysaccharides. Many factors that affect separation of carbohydrates by HPAEC have been evaluated, however effect of temperature has not been carefully studied. In the present study, neutral and sialylated oligosaccharides from human milk and different types of N-linked oligosaccharides were analysed by HPAEC at temperatures ranging from 13 to 30 degrees C. N-Acetyl neuraminic acid, Galacturonic acid and stachyose were also analysed since they have been used as internal standards when analysing various oligosaccharides by HPAEC. All oligosaccharides showed decreased retention times with increased temperature. Even small differences (i.e. +/- 5 degrees) resulted in considerable changes in retention times. In addition, individual oligosaccharides showed relative changes in retention time with increased temperature. By changing the temperature, a switch in elution of order of individual oligosaccharides were sometimes found. These results show that retention times relative to an internal standard cannot be used for oligosaccharide identification unless temperature is carefully controlled. Regulation of temperature is also a valuable tool in achieving optimal separation of oligosaccharides by HPAEC.
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Affiliation(s)
- E Landberg
- Department of Biomedicine and Surgery, University Hospital, Linköping, Sweden
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29
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McPherson AE, Seib PA. Preparation and Properties of Wheat and Corn Starch Maltodextrins with a Low Dextrose Equivalent. Cereal Chem 1997. [DOI: 10.1094/cchem.1997.74.4.424] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- A. E. McPherson
- Dept. Food Science and Human Nutrition, Iowa State University, Ames, IA 50010
| | - P. A. Seib
- Dept. Grain Science & Industry, Kansas State University, Manhattan, KS 66506-2201
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30
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31
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Suortti T. Coupled size-exclusion chromatography-anion-exchange chromatography in the analysis of poly- and oligosaccharides. J Chromatogr A 1997. [DOI: 10.1016/s0021-9673(96)00996-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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32
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Evaluating Sodium Salts as Pushing Agents on High-Performance Anion-Exchange Chromatography with Pulsed Amperometric Detection for Maltodextrin Analysis. STARCH-STARKE 1997. [DOI: 10.1002/star.19970491208] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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33
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Tamaki S, Hisamatsu M, Teranishi K, Yamada T. Structural Change of Potato Starch Granules by Ball-mill Treatment. STARCH-STARKE 1997. [DOI: 10.1002/star.19970491102] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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34
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Pfeffer PE, Osman SF, Hotchkiss A, Bhagwat AA, Keister DL, Valentine KM. Cyclolaminarinose. A new biologically active beta-(1-->3) cyclic glucan. Carbohydr Res 1996; 296:23-37. [PMID: 9008841 DOI: 10.1016/s0008-6215(96)00238-8] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
A unique glucan has been isolated from a recombinant strain of a Rhizobium meliloti TY7, a cyclic beta-(1-->2) glucan mutant carrying a locus specifying beta-(1-->3; 1-->6) glucan synthesis from Bradyrhizobium japonicum USDA110. This compound, which appears to have considerable hydrophobic affinity, was separated from a perchloric acid cell extract by adsorption to a C-18 silica column. Unlike those cyclic glucans previously isolated from Rhizobium meliloti or Bradyrhizobium japonicum, this molecule contains neither phosphoglycerol nor phosphocholine substituents, respectively. 2D NMR, FAB mass spectrometric analysis and high-performance anion exchange chromatography with pulsed amperometric detection (HPAEC-PAD) confirmed that this glucan is a single, cyclic decasaccharide (cyclolaminarinose) in which one of the residues is substituted in its 6-position with beta-laminarabiose. This structural assignment was confirmed by mass spectral and NMR analyses of the product obtained from two consecutive Smith degradations. Unlike the complex 13C spectrum of the unoxidized material, the spectrum of this product consisted of only six resonances due to rapid time averaging of its symmetrical structure on the relatively slow NMR timescale. Synthesis of this newly described cyclic beta-glucan in the R. meliloti ndvB mutant restored the symbiotic and hypoosmotic adaptation characteristics of the R. meliloti wild type strain.
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Affiliation(s)
- P E Pfeffer
- U.S. Department of Agriculture, ARS, Eastern Regional Research Center, Wyndmoor, PA 19038, USA
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35
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Matsui M, Kakut M, Misaki A. Fine structural features of oyster glycogen: mode of multiple branching. Carbohydr Polym 1996. [DOI: 10.1016/s0144-8617(96)00116-6] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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36
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Nagamine T, Komae K. Improvement of a method for chain-length distribution analysis of wheat amylopectin. J Chromatogr A 1996. [DOI: 10.1016/0021-9673(95)01229-x] [Citation(s) in RCA: 51] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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37
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O'Shea MG, Morell MK. High resolution slab gel electrophoresis of 8-amino-1,3, 6-pyrenetrisulfonic acid (APTS) tagged oligosaccharides using a DNA sequencer. Electrophoresis 1996; 17:681-6. [PMID: 8738327 DOI: 10.1002/elps.1150170410] [Citation(s) in RCA: 114] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
A novel electrophoretic method for the analysis of oligosaccharides using DNA sequencer technology is illustrated using malto-oligosaccharide distributions obtained following isoamylase digestion of glycogen, wheat starch and potato starch. The debranched starches were derivatized at the reducing and with the charged fluorophore 8-amino-1,3,6-pyrenetrisulfonic acid (APTS). This highly reproducible method provides baseline resolution of oligomers from chain lengths of 3 to more than 80 glucose units, and exhibits high sensitivity with detection thresholds of one femtomole per resolved band. In addition, the reductive amination procedure attaches a single fluorophore per oligosaccharide, allowing calculation of the results on either a mass or a molar basis. The efficacy of the method is illustrated through the determination of the profile of individual oligosaccharides of chain length with a degree of polymerization (DP) < 80, derived from loading less than 15 ng per analysis of glycogen, wheat and potato starches. While the results obtained were superior in resolution and sensitivity to previously reported observations using a range of techniques, they were nonetheless consistent with the overall differences between these polysaccharides. The resolution, sensitivity, reproducibility and high throughput of the method provides substantial advantages over existing methods for the analysis of linear oligosaccharide chain length distributions.
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Affiliation(s)
- M G O'Shea
- Cooperative Research Centre for Plant Science, Canberra, ACT, Australia.
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38
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Hanashiro I, Abe JI, Hizukuri S. A periodic distribution of the chain length of amylopectin as revealed by high-performance anion-exchange chromatography. Carbohydr Res 1996. [DOI: 10.1016/0008-6215(95)00408-4] [Citation(s) in RCA: 435] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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39
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40
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Hotchkiss AT, El-Bahtimy K, Fishman ML. Analysis of Pectin Structure by HPAEC-PAD. PLANT CELL WALL ANALYSIS 1996. [DOI: 10.1007/978-3-642-60989-3_8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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41
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Brewster JD, Fishman ML. Capillary electrophoresis of plant starches as the iodine complexes. J Chromatogr A 1995. [DOI: 10.1016/0021-9673(94)01144-4] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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42
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Helin J, Maaheimo H, Seppo A, Keane A, Renkonen O. Stepwise transfer of alpha-D-Galp-(1-->3)-beta-D-Galp-(1-->4)-beta-D-GlcpNAc sequences to 3-OH and 6-OH of distal galactose residues in bi-, tri-, and tetra-antennary asialo-glycans of N-linked complex type. Carbohydr Res 1995; 266:191-209. [PMID: 7697655 DOI: 10.1016/0008-6215(94)00272-h] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
The hydroxyl groups 3 and 6 of distal galactose units in bi-, tri-, and tetra-antennary asialo-glycans of N-linked complex type were substituted stepwise by transferase reactions with the sequence alpha-D-Galp-(1-->3)-beta-D-Galp-(1-->4)-beta-D-GlcpNAc. The products of each transferase reaction were purified chromatographically and the structures were confirmed by 1H NMR spectroscopy. Molecular weights of the final products were determined by matrix-assisted laser-desorption mass spectrometry (MALDI-MS).
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Affiliation(s)
- J Helin
- Institute of Biotechnology, University of Helsinki, Finland
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43
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Wong KS, Jane J. Effects of Pushing Agents on the Separation and Detection of Debranched Amylopectin by High-Performance Anion-Exchange Chromatography with Pulsed Amperometric Detection. ACTA ACUST UNITED AC 1995. [DOI: 10.1080/10826079508009221] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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44
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Application of cloned monocomponent carbohydrases for modification of plant materials. ACTA ACUST UNITED AC 1995. [DOI: 10.1016/s0921-0423(06)80114-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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45
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Fine structure of maize starches from four wx-containing genotypes of the W64A inbred line in relation to gelatinization and retrogradation. Carbohydr Polym 1995. [DOI: 10.1016/0144-8617(94)00059-3] [Citation(s) in RCA: 105] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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46
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Corradini C, Corradini D, Huber CG, Bonn GK. Synthesis of a polymeric-based stationary phase for carbohydrate separation by high-pH anion-exchange chromatography with pulsed amperometric detection. J Chromatogr A 1994. [DOI: 10.1016/0021-9673(94)00665-2] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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47
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Sullivan J, Douek M. Determination of carbohydrates in wood, pulp and process liquor samples by high-performance anion-exchange chromatography with pulsed amperometric detection. J Chromatogr A 1994. [DOI: 10.1016/0021-9673(94)80259-9] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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48
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Schols HA, Voragen AG, Colquhoun IJ. Isolation and characterization of rhamnogalacturonan oligomers, liberated during degradation of pectic hairy regions by rhamnogalacturonase. Carbohydr Res 1994; 256:97-111. [PMID: 8194077 DOI: 10.1016/0008-6215(94)84230-2] [Citation(s) in RCA: 98] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Digests of modified hairy regions of apple pectin (MHR) obtained after degradation by rhamnogalacturonase (RGase) were analyzed for oligomer composition using high-performance anion-exchange chromatography and pulsed amperometric detection. A series of oligomers which appear to be characteristic of RGase degradation could be recognized. These oligomers were isolated on a preparative scale by size-exclusion chromatography and preparative anion-exchange chromatography and analyzed for sugar composition. 1H NMR spectroscopy showed that the oligomers consisted of between 4 and 9 sugar units with a backbone of alternating rhamnose and galacturonic acid residues, partly substituted with galactose residues linked to C-4 of the rhamnose moiety. The HPLC elution pattern showed that higher oligomers were also formed during incubation with RGase. These have the same basic structure but may contain other sugar units in addition to those given above. The oligomer composition of RGase digests of MHR isolated from apple, pear, leek, onion, carrot, and potato was very similar. Using anion-exchange chromatography to monitor the degradation of MHR at increasing incubation times, it was found that all the oligomers were present from the initial stages of the enzyme reaction and that the ratio between the different oligomers remained constant with time. Implications of these results for the structure of MHR and the mechanism of RGase action are discussed.
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Affiliation(s)
- H A Schols
- Wageningen Agricultural University, Department of Food Science, Netherlands
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49
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Abstract
The rate of retrogradation of amylopectin solution differs from one starch variety to another and it is thought to be due to the different length of the external chains of amylopectin. A shortening of the external chains of waxy maize and potato amylopectin was performed with beta-amylase. Partial beta-amylolysis produced a significant fraction of chains having 2-6 glucose units. A high linear correlation (R > 0.97) was found between the enthalpy of retrograded amylopectin measured by DSC, or percent solid measured by low frequency pulsed NMR, and average external chain length. No retrogradation appeared to occur when the external chains of both amylopectins had 11 or less glucose units on average. The inhibition of retrogradation appears to be caused primarily by the presence of very short external chains, which hinders the reassociation of the long external chains.
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Affiliation(s)
- P Würsch
- Nestlé Research Centre, Nestec Ltd., Lausanne, Switzerland
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50
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Separation and quantitative determination of nanogram quantities of maltodextrins and isomaltodextrins by thin-layer chromatography. Carbohydr Res 1994. [DOI: 10.1016/0008-6215(94)84285-x] [Citation(s) in RCA: 101] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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