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Ojeda-Porras AC, Roy V, Agrofoglio LA. Chemical Approaches to Carbocyclic Nucleosides. CHEM REC 2022; 22:e202100307. [PMID: 35119191 DOI: 10.1002/tcr.202100307] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Revised: 01/22/2022] [Indexed: 02/02/2023]
Abstract
Nucleoside analogues are at the forefront of antiviral therapy for last decades. To circumvent some of their limitations, based on their metabolism, and in order to improve their anti-viral potency and selectivity, several families of nucleoside analogues have been described through structural modifications at the sugar and heterocycles. The replacement of the oxygen of the nucleoside by a methylene has led to the family of carbocyclic (or cyclopentane) nucleoside analogues. Various potent anti-HIV and anti-HBV drugs belong to this family. Main syntheses of carbocyclic analogues of nucleosides used Diels-Alder reactions (in racemic or asymmetric series), but also started from carbohydrates (ribose, glucose), as a source of optically active compounds, which then had to be transformed into carbacycles under various conditions. The growing interest in carbocyclic nucleosides has led several groups, including ours, to develop new analogues and to explore novel routes. This article will review some of the recent chemistry developed on selected five-membered ring carbocyclic nucleosides.
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Affiliation(s)
- Andrea C Ojeda-Porras
- ICOA, Univ. Orléans, CNRS UMR 7311, Université d'Orléans, Rue de Chartres, 45067, Orléans Cedex 2, France
| | - Vincent Roy
- ICOA, Univ. Orléans, CNRS UMR 7311, Université d'Orléans, Rue de Chartres, 45067, Orléans Cedex 2, France
| | - Luigi A Agrofoglio
- ICOA, Univ. Orléans, CNRS UMR 7311, Université d'Orléans, Rue de Chartres, 45067, Orléans Cedex 2, France
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Łukasik B, Mikina M, Mikołajczyk M, Pawłowska R, Żurawiński R. A novel route to a chiral building block for the preparation of cyclopentenyl carbocyclic nucleosides. Synthesis and anticancer activity of enantiomeric neplanocins A. RSC Adv 2020; 10:31838-31847. [PMID: 35518147 PMCID: PMC9056547 DOI: 10.1039/d0ra06394k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Accepted: 08/12/2020] [Indexed: 01/10/2023] Open
Abstract
The synthesis of both enantiomers of 3-[(tert-butyldimethylsilyl)oxy]methyl-4,5-O-isopropylidenecyclopent-2-en-1-ol was accomplished in six steps based on optically inactive dimethyl meso-tartrate. This key intermediate in the synthesis of cyclopentenyl carbocyclic nucleosides was subsequently applied in the preparation of enantiomeric neplanocins A. The toxic effect of these compounds was investigated for a series of suspension and adherent cancer cell lines and normal human fibroblasts. (-)-Neplanocin A ((-)-NPA) was more toxic against all tested cancer cell lines than its dextrorotary counterpart. The highest toxicity with IC50 values of 7 and 10 μM was observed for the MOLT-4 and A431 cells, respectively. Moreover, (-)-NPA also induced apoptosis in A431 cell while this effect was not observed for (+)-NPA.
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Affiliation(s)
- Beata Łukasik
- Division of Organic Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences Sienkiewicza 112 90-363 Łódź Poland +48-426803260
| | - Maciej Mikina
- Division of Organic Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences Sienkiewicza 112 90-363 Łódź Poland +48-426803260
| | - Marian Mikołajczyk
- Division of Organic Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences Sienkiewicza 112 90-363 Łódź Poland +48-426803260
| | - Róża Pawłowska
- Division of Bioorganic Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences Sienkiewicza 112 90-363 Łódź Poland
| | - Remigiusz Żurawiński
- Division of Organic Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences Sienkiewicza 112 90-363 Łódź Poland +48-426803260
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3
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Syntheses of cyclopentyl nucleoside (−)-neplanocin A through tetrazole-fragmentation from cyanophosphates. Tetrahedron 2018. [DOI: 10.1016/j.tet.2018.03.020] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Abstract
Measles virus (MV) infections have been almost eradicated in some industrialized nations. However, MV continues to cause severe disease and mortality in the world and is responsible for clusters of exogenous-borne disease in essentially disease-free countries. Because of the ebb and flow of immunization campaigns, especially in the poverty-stricken and war-torn Third World, and the ominous potential for severe disease and mortality, it is vital that research for discovery of therapeutic countermeasures should continue. To that end, a number of compounds have been evaluated for efficacy in vitro and in animal models, and several therapeutic modalities have been tested in the clinic. The only current therapies used in the clinic include ribavirin administered orally or intravenously, alone or in combination with immune serum globulin; these therapies have demonstrated variable efficacy. Therefore, drug discovery efforts have been launched to supplement the existing treatments for MV infections. Antisense molecules, adenosine and guanosine nucleosides, including ring-expanded ‘fat’ nucleoside analogues, brassinosteroids, coumarins, peptide inhibitors, modulators of cholesterol synthesis and a variety of natural products have been screened for efficacy and toxicity both in vitro and in animals. However, none of these agents has gone into human clinical trials and most will not merit further development due to toxicity concerns and/or low potency. Thus, further research is needed to develop more potent and less toxic drugs that could be used for treating MV infections to supplement the existing MV vaccine campaigns.
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Affiliation(s)
- Dale L Barnard
- Institute for Antiviral Research, Dept. ADVS, Utah State University, Logan, UT, USA.
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Affiliation(s)
- Tobias Gylling Frihed
- Max-Planck-Institut für Kohlenforschung; Kaiser-Wilhelm Platz 1 45470 Mülheim an der Ruhr Germany
| | - Mikael Bols
- Department of Chemistry; University of Copenhagen; Universitetsparken 5 2100 Copenhagen Denmark
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Tan YX, Santhanakrishnan S, Yang HY, Chai CLL, Tam EKW. Synthesis of Neplanocin A and Its 3′-Epimer via an Intramolecular Baylis–Hillman Reaction. J Org Chem 2014; 79:8059-66. [DOI: 10.1021/jo501248e] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
- Yun Xuan Tan
- Institute of Chemical & Engineering Sciences, A*STAR (Agency for Science, Technology and Research), 8 Biomedical Grove, Neuros#07-01, Singapore 13866
| | - Sridhar Santhanakrishnan
- Institute of Chemical & Engineering Sciences, A*STAR (Agency for Science, Technology and Research), 8 Biomedical Grove, Neuros#07-01, Singapore 13866
| | - Hai Yan Yang
- Institute of Chemical & Engineering Sciences, A*STAR (Agency for Science, Technology and Research), 8 Biomedical Grove, Neuros#07-01, Singapore 13866
| | - Christina L. L. Chai
- Institute of Chemical & Engineering Sciences, A*STAR (Agency for Science, Technology and Research), 8 Biomedical Grove, Neuros#07-01, Singapore 13866
- Department
of Pharmacy,
Faculty of Science, National University of Singapore, 18 Science
Drive 4, Singapore 117543
| | - Eric Kwok Wai Tam
- Institute of Chemical & Engineering Sciences, A*STAR (Agency for Science, Technology and Research), 8 Biomedical Grove, Neuros#07-01, Singapore 13866
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Caturelli Kuran JA, Moglioni AG. Differential Oxidation Conditions of Substituted Cyclobutanols Derived from Terpenes. SYNTHETIC COMMUN 2014. [DOI: 10.1080/00397911.2014.898308] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Juan A. Caturelli Kuran
- a Departamento de Farmacología, Facultad de Farmacia y Bioquímica , Universidad de Buenos Aires , Buenos Aires , Argentina
| | - Albertina G. Moglioni
- a Departamento de Farmacología, Facultad de Farmacia y Bioquímica , Universidad de Buenos Aires , Buenos Aires , Argentina
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Experimental and computational investigation of the unexpected formation of β-substituted polyoxygenated furans from conveniently functionalized carbohydrates. Tetrahedron 2010. [DOI: 10.1016/j.tet.2009.11.051] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Nguyen Van Nhien A, Cordonnier R, Le Bas MD, Delacroix S, Soriano E, Marco-Contelles J, Postel D. Highly functionalized, enantiomerically pure furo[x,y-c]pyrans via alkylidenecarbenes derived from sugar templates: synthesis and mechanism study via computational chemistry. Tetrahedron 2009. [DOI: 10.1016/j.tet.2009.08.080] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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The synthesis of polyoxygenated, enantiomerically pure cyclopentane derivatives on route to neplanocin A stereoisomers via alkylidenecarbene species prepared from sugar templates. Carbohydr Res 2009; 344:1605-11. [DOI: 10.1016/j.carres.2009.04.006] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2009] [Revised: 03/31/2009] [Accepted: 04/09/2009] [Indexed: 11/21/2022]
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12
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Synthesis of (−)-neplanocin A with the highest overall yield via an efficient Mitsunobu coupling. Tetrahedron 2007. [DOI: 10.1016/j.tet.2007.06.100] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Cho JH, Bernard DL, Sidwell RW, Kern ER, Chu CK. Synthesis of cyclopentenyl carbocyclic nucleosides as potential antiviral agents against orthopoxviruses and SARS. J Med Chem 2006; 49:1140-8. [PMID: 16451078 DOI: 10.1021/jm0509750] [Citation(s) in RCA: 113] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A practical and convenient methodology for the synthesis of chiral cyclopentenol derivative (+)-12a has been developed as the key intermediate that was utilized for the synthesis of biologically active carbocyclic nucleosides. The selective protection of allylic hydroxyl group followed by the ring-closing metathesis (RCM) reaction with Grubbs catalysts provided (+)-12a on a 10 g scale with 52% overall yield from D-ribose (4). The key intermediate (+)-12a was utilized for the synthesis of unnatural five-membered ring heterocyclic carbocyclic nucleosides. The newly synthesized 1,2,3-triazole analogue (17c) exhibited potent antiviral activity (EC(50) 0.4 microM) against vaccinia virus and moderate activities (EC(50) 39 microM) against cowpox virus and severe acute respiratory syndrome coronavirus (SARSCoV) (EC(50) 47 microM). The 1,2,4-triazole analogue (17a) also exhibited moderate antiviral activity (EC(50) 21 microM) against SARSCoV.
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Affiliation(s)
- Jong Hyun Cho
- The University of Georgia College of Pharmacy, Athens, GA 30602, USA
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Van Nhien A, León R, Postel D, Carmo Carreiras M, García A, Marco‐Contelles J. 1,6‐C‐H and 1,5‐O‐Si Insertion Reactions of Alkylidenecarbene Derivatives of Monosaccharides*. J Carbohydr Chem 2005. [DOI: 10.1081/car-200066924] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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17
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Ono M, Nishimura K, Tsubouchi H, Nagaoka Y, Tomioka K. Total synthesis of (-)-neplanocin a by using lithium thiolate-initiated Michael-aldol tandem cyclization reaction. J Org Chem 2001; 66:8199-203. [PMID: 11722225 DOI: 10.1021/jo016090n] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
(-)-Neplanocin A (1), S-adenosylhomocystein hydrolase inhibitor, was synthesized. The characteristic of this synthesis is a stereoselective construction of five-membered ring of neplanocin A by intramolecular aldol reaction of the lithium enolate that was generated by conjugate addition of lithium thiolate. TBS-protected chiral omega-oxo-alpha,beta-unsaturated ester 16, which was prepared from D-mannitol, was treated with 1.2 equiv of lithium benzylthiolate in THF at -20 degrees C to give three separable cyclization products in good yields and stereoselectivity. After conversions of protective groups, the benzylsulfanyl part of 21 was removed by oxidation to sulfoxide and subsequent thermal elimination to give the requisite double bond. Through the functional group transformations of 30, total synthesis of (-)-neplanocin A (1) was accomplished.
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Affiliation(s)
- M Ono
- Graduate School of Pharmaceutical Sciences, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
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Zhu XF. The latest progress in the synthesis of carbocyclic nucleosides. NUCLEOSIDES, NUCLEOTIDES & NUCLEIC ACIDS 2000; 19:651-90. [PMID: 10843500 DOI: 10.1080/15257770008035015] [Citation(s) in RCA: 79] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
This review presents the latest developments in the field of carba-nucleosides (1994-1998). Special attention is paid to the synthesis of key precursors to those carba-nucleosides that possess significant biological activities or have novel structures.
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Affiliation(s)
- X F Zhu
- Department of Chemistry, Texas A & M University, College Station 77842-3012, USA
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Kitade Y, Nakanishi M, Yatome C. 9-[(2'S,3'S)-3'-formyl-2',3'-dihydroxypropyl]adenine: a facile affinity-labeling probe of human S-adenosyl-L-homocysteine hydrolase. Bioorg Med Chem Lett 1999; 9:2737-40. [PMID: 10509926 DOI: 10.1016/s0960-894x(99)00470-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
Treatment of human recombinant S-adenosyl-L-homocysteine (SAH) hydrolase with 9-[(2'S,3'S)-3'-formyl-2',3'-dihydroxypropyl]adenine (FDHPA) caused irreversible inactivation in a time- and concentration-dependent manner (Ki = 8.8 microM, k(inact) = 0.09 min(-1)). FDHPA behaved as a facile affinity-labeling probe of SAH hydrolase.
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Affiliation(s)
- Y Kitade
- Department of Biomolecular Science, Faculty of Engineering, Gifu University, Japan
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Abstract
Billions of people are infected with respiratory viruses annually. Infants and young children, the elderly, immunocompromised individuals and those debilitated by other diseases or nutritional deficiencies are most at risk for serious disease. There are few vaccines available for use against these viruses, and even where there are (influenza, measles and adenovirus), infections remain common. The continued prevalence of respiratory virus infections has lead to renewed efforts to find safe agents effective against the most medically important respiratory viruses: influenza, respiratory syncytial, parainfluenza, measles, rhino- and adenovirus. Copyright 1999 Harcourt Publishers Ltd.
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Affiliation(s)
- Philip R. Wyde
- Department of Microbiology, Immunology, Baylor College of Medicine, Houston, TX, USA
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Hirota K, Monguchi Y, Sajiki H, Yatome C, Hiraoka A, Kitade Y. A Convenient Synthesis of Acyclic Adenosines with an Unsaturated Side Chain by Modification of 9-(2,3-O-Isopropylidene-D-Ribityl)Adenine. ACTA ACUST UNITED AC 1998. [DOI: 10.1080/07328319808003472] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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