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Critique on Ecological Methodologies Used in Water Quality Studies and Coastal Management: A Review. JOURNAL OF MARINE SCIENCE AND ENGINEERING 2022. [DOI: 10.3390/jmse10050701] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The subject of ecology is the understanding of the relations among living organisms and their interactions with the abiotic environment. The need to quantify ecological phenomena requires the development of mathematical tools, including ecological indices, statistical procedures and simulation models. Some of these tools have been found to be convenient by many scientists and policy makers in related scientific disciplines to express marine pollution levels, marine water quality and future trends; they have, therefore, been adopted in coastal management methodologies and practices. In the present work, a number of ecological tools are reviewed regarding their relevance to supporting water quality studies, as well as their suitability to be included in the toolkit of coastal management practices. Their problems and weaknesses, together with the science–policy misconnection, are discussed.
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Tamvakis A, Tsirtsis G, Karydis M, Patsidis K, Kokkoris GD. Drivers of harmful algal blooms in coastal areas of Eastern Mediterranean: a machine learning methodological approach. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2021; 18:6484-6505. [PMID: 34517542 DOI: 10.3934/mbe.2021322] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Harmful algal species are present in the Mediterranean Sea and are often associated with toxic events affecting the nearby coastal zones. The presence of 18 marine microalgae, at genus level, associated with potentially harmful characteristics was predicted using a number of machine learning techniques based exclusively on a small set of abiotic variables, already identified as drivers of blooms. Random Forest (RF) algorithm achieved the best predictive performance by correctly identifying the presence of most genera with a mean of 89.2% of total samples. Although, RF has shown lower predictive performance for genera present in a low number of samples, its predictive power remains at least "fair' in these cases. The main tree-based advantage of RF was thereafter used to assess the importance of the input variables in predicting the presence of the algal genera. Temperature had the most powerful effect on genera's presences, although this effect varies among genera. Finally, the genera were clustered based on their response to the considered abiotic variables and common trends in an ecological context were identified.
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Affiliation(s)
- Androniki Tamvakis
- Department of Marine Sciences, Faculty of Environment, University of the Aegean, University Hill, GR81100, Mytilene, Greece
| | - George Tsirtsis
- Department of Marine Sciences, Faculty of Environment, University of the Aegean, University Hill, GR81100, Mytilene, Greece
| | - Michael Karydis
- Department of Marine Sciences, Faculty of Environment, University of the Aegean, University Hill, GR81100, Mytilene, Greece
| | - Kleanthis Patsidis
- Department of Marine Sciences, Faculty of Environment, University of the Aegean, University Hill, GR81100, Mytilene, Greece
| | - Giorgos D Kokkoris
- Department of Marine Sciences, Faculty of Environment, University of the Aegean, University Hill, GR81100, Mytilene, Greece
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A webGIS Application to Assess Seawater Quality: A Case Study in a Coastal Area in the Northern Aegean Sea. JOURNAL OF MARINE SCIENCE AND ENGINEERING 2020. [DOI: 10.3390/jmse9010033] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The assessment of seawater quality in coastal areas is an important issue as it is related to the welfare of coastal ecosystems, a prerequisite for the provision of the related ecosystem services. During the last decades, marine eutrophication has become an important problem in coastal waters as a result of nutrient inputs increase. Consequently, there is need for appropriate methods and tools to assess the eutrophication status of seawater which should be user-friendly to coastal managers and support the adoption of effective plans for the protection and sustainable development of the coastal environment. In this framework, a user-friendly webGIS application has been developed and the Strait of Mytilene at the southeastern part of the Island of Lesvos in the NE Aegean Sea, Greece, was used as a case study. The methodology includes, as a first step, the evaluation of the accuracy of spatial interpolators widely applied in oceanographic studies for assessing the spatial distribution of relevant variables. The most appropriate interpolator revealed for each variable is subsequently applied for the production of the representative thematic layer. The second step involves the integration of the information from the optimal thematic layers representing the spatial distributions of the variables under study; as a result, a new thematic layer illustrating the eutrophication status of the study area is produced. The webGIS application is fully available via a web browser and provides a number of geoprocessing modules developed in Python which implement the user interface, the application of the interpolation analytical tasks, the statistical evaluation toolset and the integration of the optimal interpolated layers. Suggestions for further improvement of the proposed webGIS application are discussed.
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Wu Z, Kong M, Cai Y, Wang X, Li K. Index of biotic integrity based on phytoplankton and water quality index: Do they have a similar pattern on water quality assessment? A study of rivers in Lake Taihu Basin, China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 658:395-404. [PMID: 30579197 DOI: 10.1016/j.scitotenv.2018.12.216] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2018] [Revised: 12/13/2018] [Accepted: 12/14/2018] [Indexed: 06/09/2023]
Abstract
Our study illustrated the ecological conditions in the rivers of Lake Taihu Basin (LTB) using an index of biotic integrity based on phytoplankton (P-IBI), and its performance was compared with the previously developed water quality index (WQI). Samples were collected seasonally at 96 sites covering the major rivers from September 2014 to January 2016. Three critical ecological indices, i.e., phytoplankton density, chlorophyll a (chl a), and Menhinick, were selected from a pool of 22 candidate indices mainly according to the correlations among indices and environmental parameters. The results indicated that the ecological status of LTB based on P-IBI was significantly different at spatial (especially between Tiaoxi and the other 5 river systems) and seasonal scales. Furthermore, the proposed P-IBI effectively identified the major environmental parameters (total nitrogen, ammonium, total phosphorus, and permanganate index) associated with each level (bad, low, and moderate). Moreover, the P-IBI was closely and positively correlated with the WQI at the spatial scale regardless of season. However, the ecological conditions were significantly worse according to the P-IBI at both the spatial (P < 0.001) and seasonal scales (P values of 0.018 in winter and < 0.001 in other seasons, respectively), and the seasonal distribution pattern differed between the two methods. Our study suggests that the P-IBI provides an essential supplement for the assessment of ecological conditions of rivers and that the selected critical indices (phytoplankton density, chl a, and Menhinick) are suitable for river ecosystems. Additionally, compared with WQI, the water quality condition was generally worse when using P-IBI, and this phenomenon requires further attention during water quality assessments, as well as different seasonal distribution patterns.
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Affiliation(s)
- Zhaoshi Wu
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008, China.
| | - Ming Kong
- Nanjing Institute of Environmental Sciences, Ministry of Environmental Protection, Nanjing 210042, China.
| | - Yongjiu Cai
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008, China.
| | - Xiaolong Wang
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008, China.
| | - Kuanyi Li
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008, China; Sino-Danish College, University of Chinese Academy of Sciences, Beijing 100049, China.
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Balci M, Balkis N. Assessment of phytoplankton and environmental variables for water quality and trophic state classification in the Gemlik Gulf, Marmara Sea (Turkey). MARINE POLLUTION BULLETIN 2017; 115:172-189. [PMID: 27986299 DOI: 10.1016/j.marpolbul.2016.12.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2016] [Revised: 11/29/2016] [Accepted: 12/05/2016] [Indexed: 06/06/2023]
Abstract
Phytoplankton assemblages related to environmental factors and ecological status of the Gemlik Gulf were investigated between June 2010 and May 2011. A total 155 phytoplankton species were detected and 6 taxa (Amphisolenia laticincta, Archaeperidinium minutum, Cochlodinium sp., Gynogonadinium aequatoriale, Heterocapsa rotundata and Metaphalacroma sp.) were new records for the Turkish Seas. The lowest and highest total phytoplankton abundance among the sampling units (depths) was recorded in April 2011 (7.4×103cellsL-1) and July 2010 (251.8×103cellsL-1). Local small patches of visible red tide events were detected especially in the gulf, although a phytoplankton bloom was not observed. The water column was well stratified in the early autumn and well mixed in the early spring according to stratification index values. Surface nutrient concentrations increased especially at stations located inside of the gulf. The limiting effect of silicate was observed in early, mid-summer and early winter periods while the nitrogen was the limiting nutrient in the gulf during the whole sampling period. In the Gulf, low water quality-high mesotrophic and bad water quality-eutrophic status, high quality and low trophic level were generally detected according to Chl a, dissolved oxygen and trophic index. However, indices developed to determine the trophic level and water quality of the Mediterranean Sea can give unexpected results about the current environmental quality status when it is applied to the Marmara Sea which has limited photic zone by the halocline-pycnocline and thermocline.
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Affiliation(s)
- Muharrem Balci
- Istanbul University, Faculty of Science, Department of Biology, 34134 Vezneciler, Istanbul, Turkey.
| | - Neslihan Balkis
- Istanbul University, Faculty of Science, Department of Biology, 34134 Vezneciler, Istanbul, Turkey
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Karydis M, Kitsiou D. Eutrophication and environmental policy in the Mediterranean Sea: a review. ENVIRONMENTAL MONITORING AND ASSESSMENT 2012; 184:4931-4984. [PMID: 21956336 DOI: 10.1007/s10661-011-2313-2] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2010] [Accepted: 08/24/2011] [Indexed: 05/31/2023]
Abstract
The Mediterranean Sea is a semienclosed basin connected with the open sea mainly through the Strait of Gibraltar. Due to the circulation pattern and the long residence time ranging between 80 and 100 years, the Mediterranean Sea is a sensitive environment to eutrophication pressures. The main body of water of the Mediterranean is characterized by very low nutrient concentrations, and therefore, the Mediterranean is classified among the most oligotrophic (very poor waters in nutrients) seas of the world's oceans. However, some coastal areas, mainly in the northern part of the basin, receive excessive loads of nutrients from sewage effluents, river fluxes, aquaculture farms, fertilizers, and industrial facilities, showing intense eutrophic phenomena with many adverse effects for the marine ecosystem and humans. Various national and international authorities, in addition to monitoring, have taken legal and administrative measures to mitigate eutrophication trends in the area. The Mediterranean environment is a good paradigm of integration of extensive legal framework, scientific knowledge, and administrative practices. The Barcelona Convention, the Mediterranean Action Plan, and European Union Directives on water quality and coastal management, together with scientific information derived from international research programs in the Mediterranean, provide a sound background for practical actions in eutrophication problems. In the present work, the problem of coastal eutrophication in the Mediterranean is reviewed in connection with public policies of the Mediterranean States based on national and international legislation and scientific knowledge on Mediterranean oceanography-ecology and actions coordinated by international bodies. These common actions and practices on coastal management are also discussed in relation to the need for sustainable development and protection of the coastal zone in the Mediterranean Sea.
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Affiliation(s)
- Michael Karydis
- Department of Marine Sciences, University of the Aegean, University Hill, Mytilene, Lesvos Island 81100, Greece.
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Primpas I, Karydis M. Scaling the trophic index (TRIX) in oligotrophic marine environments. ENVIRONMENTAL MONITORING AND ASSESSMENT 2011; 178:257-269. [PMID: 20853189 DOI: 10.1007/s10661-010-1687-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2009] [Accepted: 08/23/2010] [Indexed: 05/29/2023]
Abstract
The TRIX index used for the assessment of trophic status of coastal waters has been applied in many European seas (Adriatic, Tyrrhenian, Baltic, Black Sea, and North Sea). However, all these waters are characterized by high nutrient levels and phytoplankton biomass; index calibration based on systems that are principally eutrophic may introduce bias to the index scaling. In the present work the TRIX trophic index is evaluated using three standard sets of data characterizing oligotrophy, mesotrophy, and eutrophication in the Aegean (Eastern Mediterranean) marine environment. A natural eutrophication scale based on the TRIX index that is suitable to characterize trophic conditions in oligotrophic Mediterranean water bodies is proposed. This scale was developed into a five-grade water quality classification scheme describing different levels of eutrophication. It is questionable whether this index can form a universal index of eutrophication or the scaling of TRIX should be region specific.
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Affiliation(s)
- Ioannis Primpas
- Department of Marine Sciences, University of Aegean, Mytilene 81100, Greece
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Kitsiou D, Karydis M. Coastal marine eutrophication assessment: a review on data analysis. ENVIRONMENT INTERNATIONAL 2011; 37:778-801. [PMID: 21411155 DOI: 10.1016/j.envint.2011.02.004] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2010] [Revised: 02/01/2011] [Accepted: 02/07/2011] [Indexed: 05/30/2023]
Abstract
A wide variety of data analysis techniques have been applied for quantitative assessment of coastal marine eutrophication. Indicators for assessing eutrophication and frequency distributions have been used to develop scales for characterizing oligotrophy and eutrophication. Numerical classification has also contributed to the assessment of eutrophic trends by grouping sampling sites of similar trophic conditions. Applications of eutrophication assessment based on Principal Component Analysis and Multidimensional Scaling have also been carried out. In addition, the rapid development of Geographical Information Systems has provided the framework for applications of spatial methods and mapping techniques on eutrophication studies. Satellite data have also contributed to eutrophication assessment especially at large scale. Multiple criteria analysis methods can integrate eutrophication variables together with socio-economic parameters providing a holistic approach particularly useful to policy makers. As the current concept of eutrophication problems is to be examined as part of a coastal management approach, more complex quantitative procedures are needed to provide a platform useful for implementation of environmental policy. The present work reviews methods of data analysis used for the assessment of coastal marine eutrophication. The difficulties in applying these methods on data collected from the marine environment are discussed as well as the future perspectives of spatial and multiple criteria choice methods.
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Affiliation(s)
- Dimitra Kitsiou
- Department of Marine Sciences, School of the Environment, University of the Aegean, Mytilini, GR-81100, Greece.
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Martínez-Crego B, Alcoverro T, Romero J. Biotic indices for assessing the status of coastal waters: a review of strengths and weaknesses. ACTA ACUST UNITED AC 2010; 12:1013-28. [DOI: 10.1039/b920937a] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Zhengjun W, Huili G. Evaluating the effectiveness of routine water quality monitoring in Miyun reservoir based on geostatistical analysis. ENVIRONMENTAL MONITORING AND ASSESSMENT 2010; 160:465-478. [PMID: 19093216 DOI: 10.1007/s10661-008-0711-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2008] [Accepted: 11/21/2008] [Indexed: 05/27/2023]
Abstract
This study used geographic information system techniques and geostatistics methods to evaluate the effectiveness of routine water quality monitoring in the western segment of the Miyun reservoir in Beijing. Methodologies as well as the sampling design are evaluated. The single-layer evaluation and three integrated evaluation methods including principal component analysis (PCA), ordinary kriging (OK)_Mean, and Mean_Layers were used to validate the effectiveness of evaluation methods, and the effectiveness of each sampling design was validated by comparing their errors. Results indicated that, while a single-layer evaluation only shows the trophic state of water at a specific level, an integrated evaluation synthetically analyzes and evaluates the trophic state of the entire water body. Furthermore, results of the integrated analysis show that a PCA method is more accurate and can represent the trophic state of the entire water body. The OK_Mean and Mean_Layers methods are only able to represent the mean level for trophic state of the entire water body but cannot reflect local trophic state and distribution details. Although methods used in the routine monitoring of Miyun reservoir have some similarities to the OK_Mean and Mean_Layers methods, their range of errors and uncertainty are greater because of a lack of detailed spatial continuous information. The analysis on the number of sampling points shows that, within a certain range of error, minor changes of sampling points will have no obvious impact on the monitoring results. For the routine monitoring of western Miyun reservoir, using only three to five sampling points for monitoring is inadequate. According to our analysis, it is more appropriate to use at least ten sampling points for monitoring these areas.
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Affiliation(s)
- Wang Zhengjun
- College of Life Sciences, Capital Normal University, Beijing, 100048, China
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Abstract
Research capable of differentiating resource-related community-level change from random ecological drift in natural systems has been limited. Evidence for nonrandom, resource-driven change is presented here for an epibenthic megafauna community in the abyssal northeast Pacific Ocean from 1989 to 2004. The sinking particulate organic carbon food supply is linked not only to species-specific abundances, but also to species composition and equitability. Shifts in rank abundance distributions (RADs) and evenness, from more to less equitable, correlated to increased food supply during La Niña phases of the El Niño Southern Oscillation. The results suggest that each taxon exhibited a differential response to a sufficiently low dimension resource, which led to changes in community composition and equitability. Thus the shifts were not likely due to random ecological drift. Although the community can undergo population-level variations of one or more orders of magnitude, and the shape of the RADs was variable, the organization retained a significant consistency, providing evidence of limits for such changes. The growing evidence for limited resource-driven changes in RADs and evenness further emphasizes the potential importance of temporally variable disequilibria in understanding why communities have certain basic attributes.
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Affiliation(s)
- Henry A Ruhl
- Monterey Bay Aquarium Research Institute, 7700 Sandholdt Road, Moss Landing, California 95039, USA.
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Nogales B, Aguiló-Ferretjans MM, Martín-Cardona C, Lalucat J, Bosch R. Bacterial diversity, composition and dynamics in and around recreational coastal areas. Environ Microbiol 2007; 9:1913-29. [PMID: 17635539 DOI: 10.1111/j.1462-2920.2007.01308.x] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
A comparative study on the composition of bacterial communities in a coastal area in the West Mediterranean receiving the impact of recreation-derived activities (from a marina and a beach) was performed by terminal-restriction fragment length polymorphism (T-RFLP) of 16S rDNA along spatial and temporal scales. Interpolation of concentration of hydrophobic compounds, chlorophyll and bacterial cells in seawater over the geography of the sampling area using geographic information systems techniques (GIS) allowed the delineation of two different habitats: bay and marina (with low and high levels of impact respectively), and a transition zone between them. Accordingly, the 16S rDNA T-RFLP profiles of bacterial communities in the area differed mainly spatially, with gradual changes in community composition and structure when approaching the beach and marina. Bacterial communities in impacted areas had higher diversity and equitability, as well as different composition. The main bacterial populations inferred in bay samples, which were members of the Alphaproteobacteria (mainly SAR11 and Roseobacter groups), were replaced by a different population of the Roseobacter clade, and members of the Gammaproteobacteria and Bacteroidetes in more impacted areas. There were also differences in the dynamics of bacterial communities. While temporal variations in bacterial communities in bay samples were lower and mainly determined by temperature, an important factor for the functioning of this ecosystem, variation in impacted areas was more irregular, not so much temperature-driven, and in the case of the transition zone (beach) reflected the use of the coast during warmer periods.
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Affiliation(s)
- Balbina Nogales
- Grup de Microbiologia, Department Biologia, Universitat de les Illes Balears, 07122 Palma de Mallorca, Spain.
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Møhlenberg F, Petersen S, Petersen AH, Gameiro C. Long-term trends and short-term variability of water quality in Skive Fjord, Denmark - nutrient load and mussels are the primary pressures and drivers that influence water quality. ENVIRONMENTAL MONITORING AND ASSESSMENT 2007; 127:503-21. [PMID: 17058000 DOI: 10.1007/s10661-006-9298-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2005] [Accepted: 05/08/2006] [Indexed: 05/12/2023]
Abstract
Nineteen years of monitoring data from the eutrophic Skive Fjord, Denmark were examined for linkages to external pressures and drivers, including nutrient inputs, meteorology and stocks of blue mussels. Linkages were examined by: 1) time-series analysis to document effects of nutrient reduction programs, 2) Pearson Rank correlations, 3) multivariate statistical analysis (PLS) to identify water quality variables with high predictability and their linkages to pressures, and 4) regression analysis to quantify relationships between pressures and water quality. Freshwater input, nitrogen load and phosphorus load showed decreasing trends through the period 1984-2002. The load reductions were only partially translated into trends in water quality: phosphorus decreased in most seasons, while total nitrogen decreased during winter and spring only. Phosphorus concentration had the highest predictability (explained by seasonal temperature variation) followed by transparency, silicate, tot-N, chlorophyll-a, primary productivity, phytoplankton diversity and phytoplankton turnover. The variation in pressures other than nutrient input confounded the relations between loads and water quality. High biomass of mussels led to reduced chlorophyll-a and increased transparency, while short-term variability in water column mixing led to changes in chlorophyll-a due to nutrient entrainment and coupling to benthic mussels.
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Affiliation(s)
- F Møhlenberg
- DHI - Institute for water and environment, Hørsholm, Denmark.
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