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Thapa BS, Pandit S, Mishra RK, Joshi S, Idris AM, Tusher TR. Emergence of per- and poly-fluoroalkyl substances (PFAS) and advances in the remediation strategies. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 916:170142. [PMID: 38242458 DOI: 10.1016/j.scitotenv.2024.170142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 10/20/2023] [Accepted: 01/11/2024] [Indexed: 01/21/2024]
Abstract
A group of fluorinated organic molecules known as per- and poly-fluoroalkyl substances (PFAS) have been commonly produced and circulated in the environment. PFAS, owing to multiple strong CF bonds, exhibit exceptional stability and possess a high level of resistance against biological or chemical degradation. Recently, PFAS have been identified to cause numerous hazardous effects on the biotic ecosystem. As a result, extensive efforts have been made in recent years to develop effective methods to remove PFAS. Adsorption, filtration, heat treatment, chemical oxidation/reduction, and soil washing are a few of the physicochemical techniques that have shown their ability to remove PFAS from contaminated matrixes. However these methods also carry significant drawbacks, including the fact that they are expensive, energy-intensive, unsuitable for in-situ treatment, and requirement to be carried under dormant conditions. The metabolic products released upon PFAS degradation are largely unknown, despite the fact that thermal disintegration methods are widely used. In contrast to physical and chemical methods, biological degradation of PFAS has been regarded as efficient method. However, PFAS are difficult to instantly and completely metabolize through biological methods due to the limitations of biocatalytic mechanisms. Nevertheless, cost, easy-to-operate and environmentally safe are some of the advantages over its counterpart. The present review comprehensively discusses the occurrence of PFAS, the state-of-the science of remediation technologies and approaches applied, and the remediation challenges. The article also focuses on the future research directions toward the development of effective methods for PFAS-contaminated site in-situ treatment.
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Affiliation(s)
- Bhim Sen Thapa
- Department of Biological Sciences, Marquette University, Milwaukee, WI 53233, USA
| | - Soumya Pandit
- Department of Life Sciences, School of Basic Sciences and Research, Sharda University, Greater Noida 201310, UP, India
| | - Rahul Kumar Mishra
- Department of Life Sciences, School of Basic Sciences and Research, Sharda University, Greater Noida 201310, UP, India
| | - Sanket Joshi
- Amity Institute of Microbial Technology, Amity University Rajasthan, Kant Kalwar, NH 11C, Jaipur, Rajasthan 303002, India
| | - Abubakr M Idris
- Department of Chemistry, College of Science, King Khalid University, Abha 62529, Saudi Arabia; Research Center for Advanced Materials Science (RCAMS), King Khalid University, Abha 62529, Saudi Arabia
| | - Tanmoy Roy Tusher
- Department of Biological Sciences, Marquette University, Milwaukee, WI 53233, USA; Department of Environmental Science and Resource Management, Mawlana Bhashani Science and Technology University, Tangail 1902, Bangladesh.
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2,4,6-trinitrotoluene (TNT) degradation by Indiicoccus explosivorum (S5-TSA-19). Arch Microbiol 2022; 204:447. [PMID: 35778571 DOI: 10.1007/s00203-022-03057-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2022] [Accepted: 06/05/2022] [Indexed: 11/02/2022]
Abstract
2,4,6-trinitrotoluene (TNT), a nitro-aromatic explosive commonly used for defense and several non-violent applications is contributing to serious environmental pollution problems including human health. The current study investigated the remediation potential of a native soil isolate, i.e., Indiicoccus explosivorum (strain S5-TSA-19) isolated from collected samples of an explosive manufacturing site, against TNT. The survivability of I. explosivorum against explosives is indirectly justified through its isolation; thus, it is being chosen for further study. At a TNT concentration of 120 mg/L within an optimized environment (i.e., at 30 °C and 120 rpm), the isolate was continually incubated for 30 days in a minimal salt medium (MSM). The proliferation of the isolate and the concentration of TNT, nitrate, nitrite, and ammonium ion were evaluated at a particular time during the experiment. Within 168 h (i.e., 7 days) of incubation, I. explosivorum co-metabolically degraded 100% TNT. The biodegradation procedure succeeded the first-order kinetics mechanism. Formations of additional metabolites like 2,4-dinitrotoluene (DNT), 2,4-diamino-6-nitrotoluene (2-DANT), and 2-amino-4,6-dinitrotoluene (2-ADNT), were also witnessed. TNT seems to be non-toxic for the isolate, as it reproduced admirably in TNT presence. To date, it is the first report of Indiicoccus explosivorum, efficiently bio-remediating TNT, i.e., a nitro-aromatic compound via different degradation pathways, leading to the production of simpler as well as less harmful end products. Further, at the field-scale application, Indiicoccus explosivorum may be explored for the bioremediation of TNT (i.e., a nitro-aromatic compound)-contaminated effluents.
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Islam W, Noman A, Naveed H, Huang Z, Chen HYH. Role of environmental factors in shaping the soil microbiome. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:41225-41247. [PMID: 32829437 DOI: 10.1007/s11356-020-10471-2] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2020] [Accepted: 08/10/2020] [Indexed: 05/09/2023]
Abstract
The soil microbiome comprises one of the most important and complex components of all terrestrial ecosystems as it harbors millions of microbes including bacteria, fungi, archaea, viruses, and protozoa. Together, these microbes and environmental factors contribute to shaping the soil microbiome, both spatially and temporally. Recent advances in genomic and metagenomic analyses have enabled a more comprehensive elucidation of the soil microbiome. However, most studies have described major modulators such as fungi and bacteria while overlooking other soil microbes. This review encompasses all known microbes that may exist in a particular soil microbiome by describing their occurrence, abundance, diversity, distribution, communication, and functions. Finally, we examined the role of several abiotic factors involved in the shaping of the soil microbiome.
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Affiliation(s)
- Waqar Islam
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, Fujian Normal University, Fuzhou, 350007, China
- Institute of Geography, Fujian Normal University, Fuzhou, 350007, China
- Faculty of Natural Resources Management, Lakehead University, 955 Oliver Rd, Thunder Bay, ON, P7B 5E1, Canada
| | - Ali Noman
- Department of Botany, Government College University, Faisalabad, 38000, Pakistan
| | - Hassan Naveed
- College of Life Science, Leshan Normal University, Leshan, 614004, Sichuan, China
| | - Zhiqun Huang
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, Fujian Normal University, Fuzhou, 350007, China.
- Institute of Geography, Fujian Normal University, Fuzhou, 350007, China.
| | - Han Y H Chen
- Key Laboratory for Humid Subtropical Eco-Geographical Processes of the Ministry of Education, Fujian Normal University, Fuzhou, 350007, China.
- Institute of Geography, Fujian Normal University, Fuzhou, 350007, China.
- Faculty of Natural Resources Management, Lakehead University, 955 Oliver Rd, Thunder Bay, ON, P7B 5E1, Canada.
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Microbial Degradation of 2,4,6-Trinitrotoluene In Vitro and in Natural Environments. ENVIRONMENTAL SCIENCE AND ENGINEERING 2014. [DOI: 10.1007/978-3-319-01083-0_2] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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Stenuit B, Lamblin G, Cornelis P, Agathos SN. Aerobic denitration of 2,4,6-trinitrotoluene in the presence of phenazine compounds and reduced pyridine nucleotides. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2012; 46:10605-10613. [PMID: 22881832 DOI: 10.1021/es302046h] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Phenazine-containing spent culture supernatants of Pseudomonas aeruginosa concentrated with a C18 solid-phase extraction cartridge initiate NAD(P)H-dependent denitration of 2,4,6-trinitrotoluene (TNT). In this study, TNT denitration was investigated under aerobic conditions using two phenazine secondary metabolites excreted by P. aeruginosa, pyocyanin (Py) and its precursor phenazine-1- carboxylic acid (PCA), and two chemically synthesized pyocyanin analogs, phenazine methosulfate (PMS+) and phenazine ethosulfate (PES+). The biomimetic Py/NAD(P)H/O2 system was characterized and found to extensively denitrate TNT in unbuffered aqueous solution with minor production of toxic amino aromatic derivatives. To a much lesser extent, TNT denitration was also observed with PMS+ and PES+ in the presence of NAD(P)H. No TNT denitration was detected with the biomimetic PCA/NAD(P)H/O2 system. Electron paramagnetic resonance (EPR) spectroscopy analysis of the biomimetic Py/NAD(P)H/O2 system revealed the generation of superoxide radical anions (O2 •−). In vitro TNT degradation experiments in the presence of specific inhibitors of reactive oxygen species suggest a nucleophilic attack of superoxide radical anion followed by TNT denitration through an as yet unknown mechanism. The results of this research confirm the high functional versatility of the redox-active metabolite pyocyanin and the susceptibility of aromatic compounds bearing electron withdrawing substituents, such as nitro groups, to superoxide-driven nucleophilic attack.
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Affiliation(s)
- Ben Stenuit
- Earth and Life Institute, Laboratory of Bioengineering, Université Catholique de Louvain, B-1348 Louvain-la-Neuve, Belgium
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Fu J, Nyanhongo GS, Gübitz GM, Cavaco-Paulo A, Kim S. Enzymatic colouration with laccase and peroxidases: Recent progress. BIOCATAL BIOTRANSFOR 2012. [DOI: 10.3109/10242422.2012.649563] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Endophyte-Assisted Phytoremediation of Explosives in Poplar Trees by Methylobacterium populi BJ001T. ACTA ACUST UNITED AC 2011. [DOI: 10.1007/978-94-007-1599-8_14] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023]
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Soils contaminated with explosives: Environmental fate and evaluation of state-of-the-art remediation processes (IUPAC Technical Report). PURE APPL CHEM 2011. [DOI: 10.1351/pac-rep-10-01-05] [Citation(s) in RCA: 111] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
An explosion occurs when a large amount of energy is suddenly released. This energy may come from an over-pressurized steam boiler, from the products of a chemical reaction involving explosive materials, or from a nuclear reaction that is uncontrolled. In order for an explosion to occur, there must be a local accumulation of energy at the site of the explosion, which is suddenly released. This release of energy can be dissipated as blast waves, propulsion of debris, or by the emission of thermal and ionizing radiation. Modern explosives or energetic materials are nitrogen-containing organic compounds with the potential for self-oxidation to small gaseous molecules (N2, H2O, and CO2). Explosives are classified as primary or secondary based on their susceptibility of initiation. Primary explosives are highly susceptible to initiation and are often used to ignite secondary explosives, such as TNT (2,4,6-trinitrotoluene), RDX (1,3,5-trinitroperhydro-1,3,5-triazine), HMX (1,3,5,7-tetranitro-1,3,5,7-tetrazocane), and tetryl (N-methyl-N-2,4,6-tetranitro-aniline).
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Stenuit BA, Agathos SN. Microbial 2,4,6-trinitrotoluene degradation: could we learn from (bio)chemistry for bioremediation and vice versa? Appl Microbiol Biotechnol 2010; 88:1043-64. [DOI: 10.1007/s00253-010-2830-x] [Citation(s) in RCA: 64] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2010] [Revised: 08/06/2010] [Accepted: 08/08/2010] [Indexed: 12/11/2022]
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Nyanhongo GS, Schroeder M, Steiner W, Gübitz GM. Biodegradation of 2,4,6-trinitrotoluene (TNT): An enzymatic perspective. BIOCATAL BIOTRANSFOR 2009. [DOI: 10.1080/10242420500090169] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Van Aken B. Transgenic plants for enhanced phytoremediation of toxic explosives. Curr Opin Biotechnol 2009; 20:231-6. [DOI: 10.1016/j.copbio.2009.01.011] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2009] [Revised: 01/23/2009] [Accepted: 01/30/2009] [Indexed: 10/21/2022]
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Bioremediation of nitroexplosive wastewater by an yeast isolate Pichia sydowiorum MCM Y-3 in fixed film bioreactor. J Ind Microbiol Biotechnol 2008; 36:253-60. [PMID: 18979124 DOI: 10.1007/s10295-008-0493-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2008] [Accepted: 10/14/2008] [Indexed: 10/21/2022]
Abstract
Nitroexplosives are essential for security and defense of the nation and hence their production continues. Their residues and transformed products, released in the environment are toxic to both terrestrial and aquatic life. This necessitates remediation of wastewaters containing such hazardous chemicals to reduce threat to human health and environment. Bioremediation technologies using microorganisms become the present day choice. High Melting Explosive (HMX) is one of the nitroexplosives produced by nitration of hexamine using ammonium nitrate and acetic anhydride and hence the wastewater bears high concentration of nitrate and acetate. The present investigation describes potential of a soil isolate of yeast Pichia sydowiorum MCM Y-3, for remediation of HMX wastewater in fixed film bioreactor (FFBR). The flask culture studies showed appreciable growth of the organism in HMX wastewater under shake culture condition within 5-6 days of incubation at ambient temperature (28 +/- 2 degrees C). The FFBR process operated in both batch and continuous mode, with Hydraulic Retention Time (HRT) of 1 week resulted in 50-55% removal in nitrate, 70-88% in acetate, 50-66% in COD, and 28-50% in HMX content. Continuous operation of the reactor showed better removal of nitrate as compared to that in the batch operation, while removal of acetate and COD was comparable in both the modes of operation of the reactor. Insertion of baffles in the reactor increased efficiency of the reactor. Thus, FFBR developed with baffles and operated in continuous mode will be beneficial for bioremediation of high nitrate and acetate containing wastewater using the culture of P. sydowiorum.
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Boparai HK, Comfort SD, Shea PJ, Szecsody JE. Remediating explosive-contaminated groundwater by in situ redox manipulation (ISRM) of aquifer sediments. CHEMOSPHERE 2008; 71:933-941. [PMID: 18086486 DOI: 10.1016/j.chemosphere.2007.11.001] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2007] [Revised: 10/31/2007] [Accepted: 11/01/2007] [Indexed: 05/25/2023]
Abstract
In situ chemical reduction of clays and iron oxides in subsurface environments is an emerging technology for treatment of contaminated groundwater. Our objective was to determine the efficacy of dithionite-reduced sediments from the perched Pantex Aquifer (Amarillo, TX) to abiotically degrade the explosives RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), HMX (octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine), and TNT (2,4,6-trinitrotoluene). The effects of dithionite/buffer concentrations, sediments-solution ratios, and the contribution of Fe(II) were evaluated in batch experiments. Results showed that reduced Pantex sediments were highly effective in degrading all three high explosives. Degradation rates increased with increasing dithionite/buffer concentrations and soil to solution ratios (1:80-1:10 w/v). When Fe(II) was partially removed from the reduced sediments by washing (citrate-bicarbonate buffer), RDX degradation slowed, but degradation efficiency could be restored by adding Fe(II) back to the treated sediments and maintaining an alkaline pH. These data support in situ redox manipulation as a remedial option for treating explosive-contaminated groundwater at the Pantex site.
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Affiliation(s)
- H K Boparai
- School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
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Gaurav D, Malik AK, Rai PK. High-Performance Liquid Chromatographic Methods for the Analysis of Explosives. Crit Rev Anal Chem 2007. [DOI: 10.1080/10408340701244698] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Dhingra Gaurav
- a Department of Chemistry , Punjabi University , Patiala, Punjab, India
| | - Ashok Kumar Malik
- a Department of Chemistry , Punjabi University , Patiala, Punjab, India
| | - P. K. Rai
- b Centre for Fire, Explosives and Environmental Safety , New Delhi, India
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Juhasz AL, Naidu R. Explosives: fate, dynamics, and ecological impact in terrestrial and marine environments. REVIEWS OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2007; 191:163-215. [PMID: 17708075 DOI: 10.1007/978-0-387-69163-3_6] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
An explosive or energetic compound is a chemical material that, under the influence of thermal or chemical shock, decomposes rapidly with the evolution of large amounts of heat and gas. Numerous compounds and compositions may be classified as energetic compounds; however, secondary explosives, such as TNT, RDX, and HMX pose the largest potential concern to the environment because they are produced and used in defense in the greatest quantities. The environmental fate and potential hazard of energetic compounds in the environment is affected by a number of physical, chemical, and biological processes. Energetic compounds may undergo transformation through biotic or abiotic degradation. Numerous organisms have been isolated with the ability to degrade/transform energetic compounds as a sole carbon source, sole nitrogen source, or through cometabolic processes under aerobic or anaerobic conditions. Abiotic processes that lead to the transformation of energetic compounds include photolysis, hydrolysis, and reduction. The products of these reactions may be further transformed by microorganisms or may bind to soil/sediment surfaces through covalent binding or polymerization and oligomerization reactions. Although considerable research has been performed on the fate and dynamics of energetic compounds in the environment, data are still gathering on the impact of TNT, RDX, and HMX on ecological receptors. There is an urgent need to address this issue and to direct future research on expanding our knowledge on the ecological impact of energetic transformation products. In addition, it is important that energetic research considers the concept of bioavailability, including factors influencing soil/sediment aging, desorption of energetic compounds from varying soil and sediment types, methods for modeling/predicting energetic bioavailability, development of biomarkers of energetic exposure or effect, and the impact of bioavailability on ecological risk assessment.
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Affiliation(s)
- Albert L Juhasz
- Centre for Environmental Risk Assessment and Remediation, University of South Australia, Mawson Lakes Campus, Adelaide, Australia, 5095
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Van Aken B, Yoon JM, Schnoor JL. Biodegradation of nitro-substituted explosives 2,4,6-trinitrotoluene, hexahydro-1,3,5-trinitro-1,3,5-triazine, and octahydro-1,3,5,7-tetranitro-1,3,5-tetrazocine by a phytosymbiotic Methylobacterium sp. associated with poplar tissues (Populus deltoides x nigra DN34). Appl Environ Microbiol 2004; 70:508-17. [PMID: 14711682 PMCID: PMC321275 DOI: 10.1128/aem.70.1.508-517.2004] [Citation(s) in RCA: 119] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2003] [Accepted: 09/29/2003] [Indexed: 11/20/2022] Open
Abstract
A pink-pigmented symbiotic bacterium was isolated from hybrid poplar tissues (Populus deltoides x nigra DN34). The bacterium was identified by 16S and 16S-23S intergenic spacer ribosomal DNA analysis as a Methylobacterium sp. (strain BJ001). The isolated bacterium was able to use methanol as the sole source of carbon and energy, which is a specific attribute of the genus Methylobacterium. The bacterium in pure culture was shown to degrade the toxic explosives 2,4,6-trinitrotoluene (TNT), hexahydro-1,3,5-trinitro-1,3,5-triazene (RDX), and octahydro-1,3,5,7-tetranitro-1,3,5-tetrazocine (HMX). [U-ring-(14)C]TNT (25 mg liter(-1)) was fully transformed in less than 10 days. Metabolites included the reduction derivatives amino-dinitrotoluenes and diamino-nitrotoluenes. No significant release of (14)CO(2) was recorded from [(14)C]TNT. In addition, the isolated methylotroph was shown to transform [U-(14)C]RDX (20 mg liter(-1)) and [U-(14)C]HMX (2.5 mg liter(-1)) in less than 40 days. After 55 days of incubation, 58.0% of initial [(14)C]RDX and 61.4% of initial [(14)C]HMX were mineralized into (14)CO(2). The radioactivity remaining in solution accounted for 12.8 and 12.7% of initial [(14)C]RDX and [(14)C]HMX, respectively. Metabolites detected from RDX transformation included a mononitroso RDX derivative and a polar compound tentatively identified as methylenedinitramine. Since members of the genus Methylobacterium are distributed in a wide diversity of natural environments and are very often associated with plants, Methylobacterium sp. strain BJ001 may be involved in natural attenuation or in situ biodegradation (including phytoremediation) of explosive-contaminated sites.
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Affiliation(s)
- Benoit Van Aken
- Department of Civil and Environmental Engineering, The University of Iowa, Iowa City, Iowa 52242, USA.
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