Dynamics of guest binding to supramolecular systems: techniques and selected examples

Modeling Chemical Reactivity at the Interfaces of Emulsions: Effects of Partitioning and Temperature

Bulk phase chemistry is hardly ever a reasonable approximation to interpret chemical reactivity in compartmentalized systems, because multiphasic systems may alter the course of chemical reactions by modifying the local concentrations and orientations of reactants and by modifying their physical properties (acid-base equilibria, redox potentials, etc.), making them-or inducing them-to react in a selective manner. Exploiting multiphasic systems as beneficial reaction media requires an understanding of their effects on chemical reactivity. Chemical reactions in multiphasic systems follow the same laws as in bulk solution, and the measured or observed rate constant of bimolecular reactions can be expressed, under dynamic equilibrium conditions, in terms of the product of the rate constant and of the concentrations of reactants. In emulsions, reactants distribute between the oil, water, and interfacial regions according to their polarity. However, determining the distributions of reactive components in intact emulsions is arduous because it is physically impossible to separate the interfacial region from the oil and aqueous ones without disrupting the existing equilibria and, therefore, need to be determined in the intact emulsions. The challenge is, thus, to develop models to correctly interpret chemical reactivity. Here, we will review the application of the pseudophase kinetic model to emulsions, which allows us to model chemical reactivity under a variety of experimental conditions and, by carrying out an appropriate kinetic analysis, will provide important kineticparameters.

Towards Rational Chemosensor Design through Improved Understanding of Experimental Parameter Variation and Tolerance in Cyclodextrin-Promoted Fluorescence Detection

We have previously developed a highly efficient fluorescence-based toxicant-detection method that operates in complex environments to detect aromatic toxicants and toxicant metabolites with high sensitivity and selectivity. This method relies on the ability of γ-cyclodextrin to act as a supramolecular scaffold, and uses a variety of non-covalent interactions between the cyclodextrin, toxicant, and fluorophore to enable efficient detection. Reported herein is an investigation of the effect of various experimental parameters, including host concentration, temperature, pH, salt, and solvent, on the observed energy-transfer efficiencies. These results advance our understanding of γ-cyclodextrin-based association complexes and provide crucial information for the development of fluorescence-based sensors using such complexation and the resultant fluorescence-based detection.

Come-back of phenanthridine and phenanthridinium derivatives in the 21st century

Phenanthridine derivatives are one of the most intensively studied families of biologically active compounds with efficient DNA binding capability. Attracting attention since DNA structure discovery (1960s), they were early recognized as a symbol of DNA intercalative binding, for many decades applied as gold-standard DNA- and RNA-fluorescent markers (ethidium bromide), probes for cell viability (propidium iodide), but also “ill-famed” for various toxic (genotoxic) and mutagenic effects. After two decades of low interest, the discovery of phenanthridine alkaloids and new studies of antiparasitic/antitumor properties of phenanthridine derivatives resulted in the strong increase of the scientific interest about the turn of this century. Here are summarized phenanthridine-related advances in the 21st century (2000-present period) with emphasis on the supramolecular interactions and bioorganic chemistry, as well as novel or improved synthetic approaches.

Temperature effects on xanthone–β-cyclodextrin binding dynamics

The complexation dynamics of the triplet excited state of xanthone with β-cyclodextrin were studied at various temperatures between 10 and 50 °C. Association and dissociation rate constants were determined using the laser flash photolysis quenching methodology with Cu2+ as a quencher. The rate constants for the association and dissociation of triplet xanthone with β-cyclodextrin increased with temperature, while the equilibrium constant for the triplet excited state remained relatively constant. Equilibrium constants for the ground-state complexation of xanthone with β-cyclodextrin were determined from fluorescence studies at various temperatures. The ground-state binding efficiency decreased with temperature and was markedly greater than that of the triplet excited state at all temperatures. The enthalpy and entropy for the β-cyclodextrin complex formation of the ground and triplet excited states fall on the enthalpy–entropy compensation relationship previously established for cyclodextrin complexes. The activation enthalpies for the association and dissociation rate constants for triplet xanthone are similar. The activation entropy is favorable for the association process, whereas a negative activation entropy was measured for the dissociation process, suggesting that solvation plays a key role in the complex formation between xanthone and β-cyclodextrin.