Bioresponse-linked instrumental analysis

A unifying review of bioassay-guided fractionation, effect-directed analysis and related techniques

The success of modern methods in analytical chemistry sometimes obscures the problem that the ever increasing amount of analytical data does not necessarily give more insight of practical relevance. As alternative approaches, toxicity- and bioactivity-based assays can deliver valuable information about biological effects of complex materials in humans, other species or even ecosystems. However, the observed effects often cannot be clearly assigned to specific chemical compounds. In these cases, the establishment of an unambiguous cause-effect relationship is not possible. Effect-directed analysis tries to interconnect instrumental analytical techniques with a biological/biochemical entity, which identifies or isolates substances of biological relevance. Successful application has been demonstrated in many fields, either as proof-of-principle studies or even for complex samples. This review discusses the different approaches, advantages and limitations and finally shows some practical examples. The broad emergence of effect-directed analytical concepts might lead to a true paradigm shift in analytical chemistry, away from ever growing lists of chemical compounds. The connection of biological effects with the identification and quantification of molecular entities leads to relevant answers to many real life questions.

Biotin-avidin binding kinetics measured by single-molecule imaging

The high affinity of avidin for biotin has made it useful for many bioanalytical applications involving the immobilization of proteins, vesicles, and other biomolecules to surfaces. To understand the formation and stability of the resulting biotin-avidin complex, it is useful to know the kinetics of the binding reaction, especially for situations where the complex is formed at a liquid-solid interface typically used in sensor or separation applications. In this work, a single-molecule fluorescence method is developed for measuring the kinetics and affinity constant for the binding of neutravidin, a deglycosylated variant of avidin, to surface-immobilized biotin. Biotin was immobilized using succinimidyl ester chemistry onto amine sites on glass surfaces. The surface density of biotin was controlled by the extreme dilution of 3-aminopropyltriethoxysilane into a monolayer of 2-cyanoethyltriethoxysilane. The resulting biotin binding sites are spaced apart by micrometer distances, and this avoids crowding effects and makes the resolution of single molecules possible. The binding and unbinding of individual tetramethylrhodamine-labeled neutravidin molecules is measured in situ by total-internal-reflection fluorescence (TIRF) microscopy imaging. Single-molecule detection and counting is readily achieved by this measurement, where quantitative control is established by determining the probabilities of false positive and negative events based on the intensity distributions of background and single-molecule spots and by comparing the bound molecule populations with the independently measured density of binding sites on the surface. The kinetics of binding and unbinding are evaluated by intermittent imaging and counting the number of bound neutravidin molecules versus time, following introduction of a neutravidin solution or its replacement by buffer over the low-density biotinylated surface. The neutravidin binding kinetics were found to be fast, essentially diffusion-controlled, while the stability of the complex and its dissociation rate appear to be influenced by the chemistry of biotin immobilization.

Ecotoxicological classification of the Berlin river system using bioassays in respect to the European Water Framework Directive

Bioassays as well as biochemical responses (biomarkers) in ecosystems due to environmental stress provide us with signals (environmentally signalling) of potential damage in the environment. If these responses are perceived in this early stage in ecosystems, the eventual damage can be prevented. Once ecosystem damage has occurred, the remedial action processes for recovery could be expensive and pose certain logistical problems. Ideally, "early warning signals" in ecosystems using sensing systems of biochemical responses (biomarkers) would not only tell us the initial levels of damage, but these signals will also provide us with answers by the development of control strategies and precautionary measures in respect to the European Water Framework Directive (WFD). Clear technical guidelines or technical specifications on monitoring are necessary to establish and characterise reference conditions for use in an ecological status classification system for surface water bodies. For the Ecotoxicological Risk Assessment (ERA) of endocrine effects we used an approach of the exposure - dose - response concept. Based on the "Ecototoxicological Classification System of Sediments" that uses pT-values to classify effects in different river systems, we transferred the bio-monitoring data to the five-level ecological system of the WFD. To understand the complexity of the structure of populations and processes behind the health of populations, communities and ecosystems an ERA should establish links between natural factors, chemicals, and biological responses so as to assess causality. So, our ecological monitoring assessment has incorporated exposure & effects data.

Effect-directed analysis by high-performance liquid chromatography with gas-segmented enzyme inhibition

A reversed-phase high-performance liquid chromatography system with UV-detector was equipped with an on-line acetylcholinesterase inhibition assay to achieve effect-directed analysis of potentially toxic samples. The enzyme activity was detected colorimetrically using Ellman's reagent. The inhibition and substrate conversion took place in glass capillaries at a 100 microL/min flow rate. Extra-column band spreading in the reaction coils reduces the sensitivity and separation power of biochemical detectors severely. Knitted reactors exhibited no reduction of longitudinal dispersion in the tested flow range. The implementation of air-segmentation allowed an extended inhibition and substrate conversion time without a significant loss of chromatographic resolution. The limit of detection of two model compounds carbofuran (carbamate) and paraoxon-ethyl (organophosphate) was determined to be 13 ng (injected mass) and 7.4 ng, respectively, applying an isocratic chromatography method. A mixture of five insecticides was separated by a gradient elution and the inhibitory effect on the enzyme activity could be detected with high resolution. The band width at half height of the enzyme inhibition detector signal after a reaction time of about 8 min or 4.2 m of capillary, respectively, increased only by a factor of 1.4 compared to the UV-detector signal.

Topics of water sciences and technology

In the preceding series of contributions to ESPR typical examples from actual fields of water chemistry were presented on various topics: integrated water quality management, diagnosis of water bodies, therapy of aquatic systems, and fitness for aquatic systems. These contributions clearly showed the need and importance of more intensive research. In the principle committee III 'Basic Research' of the Water Chemical Society, various expert groups work on scientific backgrounds in these fields. Some relevant topics are selected in this outlook, mainly on interactions of solids with water, the role of environmental colloids, the development of modern biochemical methods for diagnosis, the impact of chemical speciation on bioavailability and water technology, and the development of advanced methods in water treatment technology. Innovative approaches to understand the interactions between pollutants, water and solids are crucial for assessment of contaminants with biochemical and analytical methods, for the development of new efficient technologies and for application of treatment methods with little or no waste and by-product formation.