1
|
Dhifet M, Gassoumi B, Lutoshkin MA, Kazachenko AS, Kazachenko AS, Al-Dossary O, Issaoui N, Nasri H. Synthesis, X-ray Crystallography, Spectroscopic Characterizations, Density Functional Theory, and Hirshfeld Surface Analyses of a Novel (Carbonato) Picket Fence Iron(III) Complex. Molecules 2024; 29:3722. [PMID: 39202803 PMCID: PMC11357499 DOI: 10.3390/molecules29163722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2024] [Revised: 07/24/2024] [Accepted: 07/26/2024] [Indexed: 09/03/2024] Open
Abstract
An Fe(III)-carbonato six-coordinate picket fence porphyrin complex with the formula [K(2,2,2-crypt)][FeIII(TpivPP)(CO3)]·C6H5Cl·3H2O (I) has been synthesized and characterized by UV-Vis and FT-IR spectra. The structure of (carbonato)(α,α,α,α-tetrakis(o-pivalamidophenyl)porphinato)ferrate(III) was also established by XRD. The iron atom is hexa-coordinated by the four nitrogen atoms of the pyrrol rings and the two oxygen atoms of the CO32- group. Complex I, characterized as a ferric high-spin complex (S = 5/2), presented higher Fe-Np (2.105(6) Å) and Fe-PC (0.654(2) Å) distances. Both X-ray molecular structure and Hirshfeld surface analysis results show that the crystal packing of I is made by C-H⋯O and C-H⋯Cg weak intermolecular hydrogen interactions involving neighboring [FeIII(TpivPP)(CO3)]- ion complexes. Computational studies were carried out at DFT/B3LYP-D3/LanL2DZ to investigate the HOMO and LUMO molecular frontier orbitals and the reactivity within the studied compound. The stability of compound I was investigated by analyzing both intra- and inter-molecular interactions using the 2D and 3DHirshfeld surface (HS) analyses. Additionally, the frontier molecular orbital (FMO) calculations and the molecular electronic potential (MEP) analyses were conducted to determine the electron localizations, electrophilic, and nucleophilic regions, as well as charge transfer (ECT) within the studied system.
Collapse
Affiliation(s)
- Mondher Dhifet
- Laboratory of Physical Chemistry of Materials (LR01ES19), Faculty of Sciences of Monastir, University of Monastir, Avenue of the Environment, Monastir 5019, Tunisia; (M.D.); (H.N.)
- Faculty of Sciences of Gafsa, University of Gafsa, Sidi Ahmed Zarrouk, Gafsa 2112, Tunisia
| | - Bouzid Gassoumi
- Laboratory of Advanced Materials and Interfaces (LIMA), Faculty of Science of Monastir, University of Monastir, Avenue of Environnment, Monastir 5000, Tunisia;
| | - Maxim A. Lutoshkin
- Institute of Chemistry and Chemical Technology, Krasnoyarsk Scientific Center, Siberian Branch, Russian Academy of Sciences, Akademgorodokst, 50/24, 660036 Krasnoyarsk, Russia; (M.A.L.); (A.S.K.)
| | - Anna S. Kazachenko
- Institute of Non-Ferrous Metals, Siberian Federal University, pr. Svobodny, 79, 660041 Krasnoyarsk, Russia;
| | - Aleksandr S. Kazachenko
- Institute of Chemistry and Chemical Technology, Krasnoyarsk Scientific Center, Siberian Branch, Russian Academy of Sciences, Akademgorodokst, 50/24, 660036 Krasnoyarsk, Russia; (M.A.L.); (A.S.K.)
| | - Omar Al-Dossary
- Department of Physics and Astronomy, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia;
| | - Noureddine Issaoui
- Laboratory of Quantum and Statistical Physics LR18ES18, Faculty of Sciences of Monastir, Avenue of the Environment, Monastir 5079, Tunisia
- Higher Institute of Computer Sciences and Mathematics of Monastir, University of Monastir, Monastir 5000, Tunisia
| | - Habib Nasri
- Laboratory of Physical Chemistry of Materials (LR01ES19), Faculty of Sciences of Monastir, University of Monastir, Avenue of the Environment, Monastir 5019, Tunisia; (M.D.); (H.N.)
| |
Collapse
|
2
|
Yao Z, Schulz CE, Yang J, Li X, Li J. Intermolecular Interactions and Intramolecular Couplings of Binuclear Porphyrin Models for Cytochrome c Oxidase. Inorg Chem 2020; 59:1242-1255. [PMID: 31910004 DOI: 10.1021/acs.inorgchem.9b02958] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Cytochrome c oxidase (CcO) has a binuclear active site composed of a high-spin heme group and a tris-histidine-ligated copper ion (CuB). By using two different porphyrin models derived by Gunter (H2TPyPP) and us (H2TImPP), we have isolated several mono- and binuclear complexes including one carbonyl and three chloride derivatives which are determined by 100 K single-crystal X-ray. Low-temperature (4 K) EPR and multitemperature (295-25 K) Mössbauer investigations on the products not only confirmed the spin states of the two metal ions (S = 5/2 Fe3+ and S = 1/2 Cu2+) but also revealed the intermolecular interactions and intramolecular couplings which are in accordance with the crystal structural features.
Collapse
Affiliation(s)
| | - Charles E Schulz
- Department of Physics , Knox College , Galesburg , Illinois 61401 , United States
| | - Jiahui Yang
- Bruker (Beijing) Scientific Technology Company , Hechuan Road, Minhang District , Shanghai 200233 , China
| | | | | |
Collapse
|
3
|
Guergueb M, Nasri S, Brahmi J, Loiseau F, Molton F, Roisnel T, Guerineau V, Turowska-Tyrk I, Aouadi K, Nasri H. Effect of the coordination of π-acceptor 4-cyanopyridine ligand on the structural and electronic properties ofmeso-tetra(para-methoxy) andmeso-tetra(para-chlorophenyl) porphyrin cobalt(ii) coordination compounds. Application in the catalytic degradation of methylene blue dye. RSC Adv 2020; 10:6900-6918. [PMID: 35493882 PMCID: PMC9049721 DOI: 10.1039/c9ra08504a] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2019] [Accepted: 01/13/2020] [Indexed: 12/01/2022] Open
Abstract
To examine the influence of both the important π-acceptor character of the 4-cyanopyridine ligand and the nature of the para-substituted phenyls of meso-porphyrins on the electronic, electrochemical and structural properties of cobaltous metalloporphyrins, we prepared and fully characterized two coordination compounds: the (4-cyanopyridine)[meso-tetra(para-methoxyphenyl)porphyrinato]cobalt(ii) and the (4-cyanopyridine)[meso-tetra(para-chlorophenyl)porphyrinato]cobalt(ii) with the [CoII(TMPP)(4-CNpy)] and [CoII(TClPP)(4-CNpy)] formulas (complexes 1–2). The solution structures of compounds 1–2 were confirmed by 1H NMR spectroscopy and mass spectrometry methods. They were further characterized by cyclic voltammetry and photoluminescence studies. The X-ray molecular structure data show that the Co-TClPP-4-NCpy derivative (2) exhibits high ruffling deformation compared to that of the Co-TMPP-4-CNpy species (1). Notably, the crystal packing of complex 1 shows the formation of Co⋯Co supramolecular dimers with a distance of 5.663 Å. As an application of our two cobaltous compounds, an investigation involving complexes 1–2 in the degradation of the methylene blue dye in the presence and absence of H2O2 in aqueous solutions was carried out. These promising results show that 1–2 can be used as catalysts in the degradation processes of dyes. Preparation and UV/vis, IR, MS, 1H NMR, cyclic voltammetry and molecular structures of two new Co(ii) complexes with para-methoxy-phenyl and para-chloro meso-porphyrins and 4-cyanopyridine ligand (1–2). Catalytic oxidation data of MB dye using 1–2.![]()
Collapse
Affiliation(s)
- Mouhieddinne Guergueb
- University of Monastir
- Laboratoire de Physico-chimie des Matériaux
- Faculté des Sciences de Monastir
- 5019 Monastir
- Tunisia
| | - Soumaya Nasri
- Department of Chemistry
- College of Science Al-Zulfi
- Majmaah University
- Saudi Arabia
| | - Jihed Brahmi
- University of Monastir
- Laboratoire de Physico-chimie des Matériaux
- Faculté des Sciences de Monastir
- 5019 Monastir
- Tunisia
| | - Frédérique Loiseau
- Département de Chimie Moléculaire
- Université Grenoble Alpes
- 38058 Grenoble Cedex 9
- France
| | - Florian Molton
- Département de Chimie Moléculaire
- Université Grenoble Alpes
- 38058 Grenoble Cedex 9
- France
| | - Thierry Roisnel
- Institute of Chemical Sciences of Rennes
- UMR 6226
- University of Rennes 1
- 35042 Rennes
- France
| | | | | | - Kaïss Aouadi
- Department of Chemistry
- College of Science
- Qassim University
- Buraidah 51452
- Saudi Arabia
| | - Habib Nasri
- University of Monastir
- Laboratoire de Physico-chimie des Matériaux
- Faculté des Sciences de Monastir
- 5019 Monastir
- Tunisia
| |
Collapse
|
4
|
Frolova EN, Ivanova TA, Turanova OA, Mingalieva LV, Shustov VA, Zueva EM, Petrova MM, Gubaidullin AT, Ovchinnikov IV. Properties of [Fe(Salten)Cl] Being a Precursor for Spin-Crossover Compounds in Polycrystals and Vitrified Acetonitrile Solutions. RUSS J INORG CHEM+ 2018. [DOI: 10.1134/s0036023618080077] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
|
5
|
Dhifaoui S, Hajji M, Nasri S, Guerfel T, Daran JC, Nasri H. A new high-spin iron(III) bis(aqua) complex with the meso-tetra(para-chlorophenyl)porphyrin: X-ray crystallography, Hirshfeld surface analysis, magnetic, EPR and electrochemical properties. RESEARCH ON CHEMICAL INTERMEDIATES 2018. [DOI: 10.1007/s11164-018-3555-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
6
|
Belkhiria MS, Dhifet M, Nasri H. Preparation and spectroscopic properties of the (cyanato-N) and (oxalato) iron(III) “picket fence” porphyrins: Structure of the (cyanato-N)(α,α,α,α-tetrakis(o-pivalamidophenyl)porphinato)iron(III) complex. J PORPHYR PHTHALOCYA 2012. [DOI: 10.1142/s108842460500068x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The reaction of the iron(III) aqua triflato picket fence porphyrin starting material with NaOCN and K 2 C 2 O 4 salts, solubilized by the crown ether 18- C -6 in organic solvents, yields respectively the iron(III) porphyrin species [ Fe III( TpivPP )( NCO )] and [ Fe III( TpivPP )( ox )]−. These compounds have been characterized by UV-vis, IR, and 1 H NMR spectroscopies. Proton NMR data for the isolated products are in accordance with high-spin ( S = 5/2) ferric porphyrin derivatives. The X-ray molecular structure of the (cyanato-N)(α,α,α,α-tertakis(o-pivalamidophenyl)porphinato)iron(III), has been determined. This structure, which is the first one reported of an iron-cyanato species, confirms the spin-state of the cyanato derivative. The iron atom is pentacoordinated by the four nitrogen atoms of the pyrrole rings and the nitrogen atom of the NCO − group. It lies at 0.540(1) Å out of the porphinato plane and 0.486(1) Å out of the four nitrogen plane of the porphyrin ring. The Fe – N ( NCO ) bond length is 1.970(2) Å and the Fe - N - C ( NCO ) bond angle is 169.9(3)°.
Collapse
Affiliation(s)
- Mohamed Salah Belkhiria
- Laboratoire de Physico-Chimie des Matériaux, Faculté des Sciences de Monastir, Avenue de l'Environnement, 5019 Monastir, Tunisia
| | - Mondher Dhifet
- Laboratoire de Physico-Chimie des Matériaux, Faculté des Sciences de Monastir, Avenue de l'Environnement, 5019 Monastir, Tunisia
| | - Habib Nasri
- Laboratoire de Physico-Chimie des Matériaux, Faculté des Sciences de Monastir, Avenue de l'Environnement, 5019 Monastir, Tunisia
| |
Collapse
|
7
|
Synthesis, spectroscopic and structural characterization of the high-spin Fe(II) cyanato-N and thiocyanato-N “picket fence” porphyrin complexes. Inorganica Chim Acta 2010. [DOI: 10.1016/j.ica.2010.05.058] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
|
8
|
Khorasani-Motlagh M, Noroozifar M, Saffari J, Patrick BO. Synthesis and structural determination of a new five-coordinate iron(III) porphyrin containing monoanion 1,4-phenyldicyanamide as axial ligand. Inorganica Chim Acta 2009. [DOI: 10.1016/j.ica.2009.06.049] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
|
9
|
Dhifet M, Belkhiria MS, Giorgi M, Nasri H. Preparation, UV–Vis, IR and 1H NMR spectra, and molecular structure of the complex ion (η2-carbonato)(α,α,α,α-tetrakis (o-pivalamidophenyl)porphinato)ferrate(III). Inorganica Chim Acta 2009. [DOI: 10.1016/j.ica.2008.12.020] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
10
|
Weber B, Käpplinger I, Görls H, Jäger EG. The Relationship between the Structure and Magnetic Properties of Bioinspired Iron(ii/iii) Complexes with Schiff-Base-Like Chelate Ligands, Part I: Complexes with Dianionic [N4] Macrocycles. Eur J Inorg Chem 2005. [DOI: 10.1002/ejic.200400759] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
|
11
|
Jene PG, Ibers JA. Structural characterization of the picket fence (TpivPP) porphyrins Co(TpivPP), Co(TpivPP)(NO2)(1-MeIm), and Co(TpivPP)(NO2)(1,2-Me2Im). Inorg Chem 2000; 39:3823-7. [PMID: 11196776 DOI: 10.1021/ic000127p] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The compounds Co(TpivPP) (1), Co(TpivPP)(NO2)(1-MeIm) (2), and Co(TpivPP)(NO2)(1,2-Me2Im) (3) have been synthesized (TpivPP = meso-tetrakis(alpha, alpha, alpha, alpha-o-pivalamidophenyl)porphyrinato dianion), and their structures have been determined with single-crystal X-ray diffraction methods. 1: a = 17.578(1) A, b = 17.596(1) A, c = 20.639(1) A, beta = 115.03(1) degrees, P2(1)/c, Z = 4, T = -120 degrees C. 2: a = 18.522(4) A, b = 18.942(4) A, c = 18.177(4) A, beta = 90.68(3) degrees, C2/c, Z = 4, T = -70 degrees C. 3: a = 18.998(4) A, b = 19.187(4) A, c = 18.000(4) A, beta = 90.96(3) degrees, C2/c, Z = 4, T = -120 degrees C. Compounds 2 and 3 have crystallographically imposed 2-fold axes. In 2 and 3, which represent R-state (relaxed) and T-state (tense) models, respectively, for hemoglobin, the NO2 ligand is bound on the "picket" side to the Co atom, and either 1-MeIm (for 2) or 1,2-Me2Im (for 3) is bound to the Co atom at the sixth coordination site on the sterically unhindered side of the molecule. The average deviations of atoms from the 24-atom porphyrin core are 0.031, 0.129, and 0.117 A for 1, 2, and 3, respectively. The Co atom is -0.043(1) A out of the mean 24-atom porphyrin plane toward the 1-MeIm ligand in 2 and -0.089(1) A out of the plane toward the 1,2-Me2Im ligand in 3. The bonds of both axial ligands in the R-state model 2, 1.898(4) A for Co-N(O2) and 1.995(4) A for Co-N(base), are shorter than the corresponding bonds in the T-state model 3, 1.917(4) A for Co-N(O2) and 2.091(4) A for Co-N(base).
Collapse
Affiliation(s)
- P G Jene
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208-3113, USA
| | | |
Collapse
|