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Chiorcea-Paquim AM. 8-oxoguanine and 8-oxodeoxyguanosine Biomarkers of Oxidative DNA Damage: A Review on HPLC-ECD Determination. Molecules 2022; 27:1620. [PMID: 35268721 PMCID: PMC8911600 DOI: 10.3390/molecules27051620] [Citation(s) in RCA: 48] [Impact Index Per Article: 24.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Revised: 02/09/2022] [Accepted: 02/11/2022] [Indexed: 11/26/2022] Open
Abstract
Reactive oxygen species (ROS) are continuously produced in living cells due to metabolic and biochemical reactions and due to exposure to physical, chemical and biological agents. Excessive ROS cause oxidative stress and lead to oxidative DNA damage. Within ROS-mediated DNA lesions, 8-oxoguanine (8-oxoG) and its nucleotide 8-oxo-2'-deoxyguanosine (8-oxodG)-the guanine and deoxyguanosine oxidation products, respectively, are regarded as the most significant biomarkers for oxidative DNA damage. The quantification of 8-oxoG and 8-oxodG in urine, blood, tissue and saliva is essential, being employed to determine the overall effects of oxidative stress and to assess the risk, diagnose, and evaluate the treatment of autoimmune, inflammatory, neurodegenerative and cardiovascular diseases, diabetes, cancer and other age-related diseases. High-performance liquid chromatography with electrochemical detection (HPLC-ECD) is largely employed for 8-oxoG and 8-oxodG determination in biological samples due to its high selectivity and sensitivity, down to the femtomolar range. This review seeks to provide an exhaustive analysis of the most recent reports on the HPLC-ECD determination of 8-oxoG and 8-oxodG in cellular DNA and body fluids, which is relevant for health research.
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Affiliation(s)
- Ana-Maria Chiorcea-Paquim
- University of Coimbra, Centre for Mechanical Engineering, Materials and Processes (CEMMPRE), Department of Chemistry, 3004-535 Coimbra, Portugal;
- Instituto Pedro Nunes (IPN), 3030-199 Coimbra, Portugal
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2
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Sheng Y, Zhu Y, Cerón ML, Yi Y, Liu P, Wang P, Xue T, Camarada MB, Wen Y. A stable nanosilver decorated phosphorene nanozyme with phosphorus-doped porous carbon microsphere for intelligent sensing of 8-hydroxy-2′-deoxyguanosine. J Electroanal Chem (Lausanne) 2021. [DOI: 10.1016/j.jelechem.2021.115522] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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3
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DNA Electrochemical Biosensors for In Situ Probing of Pharmaceutical Drug Oxidative DNA Damage. SENSORS 2021; 21:s21041125. [PMID: 33562790 PMCID: PMC7915242 DOI: 10.3390/s21041125] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Revised: 02/01/2021] [Accepted: 02/01/2021] [Indexed: 12/20/2022]
Abstract
Deoxyribonucleic acid (DNA) electrochemical biosensors are devices that incorporate immobilized DNA as a molecular recognition element on the electrode surface, and enable probing in situ the oxidative DNA damage. A wide range of DNA electrochemical biosensor analytical and biotechnological applications in pharmacology are foreseen, due to their ability to determine in situ and in real-time the DNA interaction mechanisms with pharmaceutical drugs, as well as with their degradation products, redox reaction products, and metabolites, and due to their capacity to achieve quantitative electroanalytical evaluation of the drugs, with high sensitivity, short time of analysis, and low cost. This review presents the design and applications of label-free DNA electrochemical biosensors that use DNA direct electrochemical oxidation to detect oxidative DNA damage. The DNA electrochemical biosensor development, from the viewpoint of electrochemical and atomic force microscopy (AFM) characterization, and the bottom-up immobilization of DNA nanostructures at the electrode surface, are described. Applications of DNA electrochemical biosensors that enable the label-free detection of DNA interactions with pharmaceutical compounds, such as acridine derivatives, alkaloids, alkylating agents, alkylphosphocholines, antibiotics, antimetabolites, kinase inhibitors, immunomodulatory agents, metal complexes, nucleoside analogs, and phenolic compounds, which can be used in drug analysis and drug discovery, and may lead to future screening systems, are reviewed.
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Nanostructured material-based electrochemical sensing of oxidative DNA damage biomarkers 8-oxoguanine and 8-oxodeoxyguanosine: a comprehensive review. Mikrochim Acta 2021; 188:58. [PMID: 33507409 DOI: 10.1007/s00604-020-04689-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2020] [Accepted: 12/15/2020] [Indexed: 12/12/2022]
Abstract
Oxidative DNA damage plays an important role in the pathogenesis of various diseases. Among oxidative DNA lesions, 8-oxoguanine (8-oxoG) and its corresponding nucleotide 8-oxo-2'-deoxyguanosine (8-oxodG), the guanine and deoxyguanosine oxidation products, have gained much attention, being considered biomarkers for oxidative DNA damage. Both 8-oxoG and 8-oxodG are used to predict overall body oxidative stress levels, to estimate the risk, to detect, and to make prognosis related to treatment of cancer, degenerative, and other age-related diseases. The need for rapid, easy, and low-cost detection and quantification of 8-oxoG and 8-oxodG biomarkers of oxidative DNA damage in complex samples, urine, blood, and tissue, caused an increasing interest on electrochemical sensors based on modified electrodes, due to their high sensitivity and selectivity, low-cost, and easy miniaturization and automation. This review aims to provide a comprehensive and exhaustive overview of the fundamental principles concerning the electrochemical determination of the biomarkers 8-oxoG and 8-oxodG using nanostructured materials (NsM), such as carbon nanotubes, carbon nanofibers, graphene-related materials, gold nanomaterials, metal nanoparticles, polymers, nanocomposites, dendrimers, antibodies and aptamers, and modified electrochemical sensors.
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5
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Fukai E, Sato H, Watanabe M, Nakae D, Totsuka Y. Establishment of an in vivo simulating co-culture assay platform for genotoxicity of multi-walled carbon nanotubes. Cancer Sci 2018; 109:1024-1031. [PMID: 29444368 PMCID: PMC5891196 DOI: 10.1111/cas.13534] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2017] [Revised: 02/02/2018] [Accepted: 02/07/2018] [Indexed: 01/08/2023] Open
Abstract
Engineered nanomaterials (ENM) are now used in a wide variety of fields, and, thus, their safety should urgently be assessed and secured. It has been suggested that inflammatory responses via the phagocytosis of ENM by macrophages is a key mechanism for their genotoxicity. The present study was conducted to establish a mechanism‐based assay to evaluate the genotoxicity of ENM under conditions simulating an in vivo situation, featuring a co‐culture system of murine lung resident cells (GDL1) and immune cells (RAW264.7). GDL1 were cultured with or without RAW264.7, exposed to a multi‐walled carbon nanotube (MWCNT), and then analyzed for mutagenicity and underlying mechanisms. Mutation frequencies induced in GDL1 by the MWCNT were significantly greater with the co‐existence of RAW264.7 than in its absence. Mutation spectra observed in GDL1 co‐cultured with RAW264.7 were different from those seen in GDL1 cultured alone, but similar to those observed in the lungs of mice exposed to the MWCNT in vivo. Inflammatory cytokines, such as IL‐1β and TNF‐α, were produced from RAW264.7 cells treated with the MWCNT. The generation of reactive oxygen species and the formation of 8‐oxodeoxyguanosine in GDL1 exposed to the MWCNT were greater in the co‐culture conditions than in the single culture conditions. Based on these findings, it is indicated that inflammatory responses are involved in the genotoxicity of MWCNT, and that the presently established, novel in vitro assay featuring a co‐culture system of tissue resident cells with immune cells is suitable to evaluate the genotoxicity of ENM.
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Affiliation(s)
- Emi Fukai
- Division of Carcinogenesis and Cancer Prevention, National Cancer Center Research Institute, Tokyo, Japan.,Division of Materials Science and Engineering, Graduate School of Engineering, Yokohama National University, Yokohama, Japan
| | - Haruna Sato
- Division of Carcinogenesis and Cancer Prevention, National Cancer Center Research Institute, Tokyo, Japan
| | - Masatoshi Watanabe
- Division of Materials Science and Engineering, Graduate School of Engineering, Yokohama National University, Yokohama, Japan.,Oncologic Pathology, Graduate School of Medicine, Mie University, Tsu, Japan
| | - Dai Nakae
- Department of Nutritional Science and Food Safety, Faculty of Applied Biosciences, Tokyo University of Agriculture, Tokyo, Japan
| | - Yukari Totsuka
- Division of Carcinogenesis and Cancer Prevention, National Cancer Center Research Institute, Tokyo, Japan
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6
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Reipa V, Atha DH, Coskun SH, Sims CM, Nelson BC. Controlled potential electro-oxidation of genomic DNA. PLoS One 2018; 13:e0190907. [PMID: 29324786 PMCID: PMC5764341 DOI: 10.1371/journal.pone.0190907] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Accepted: 12/21/2017] [Indexed: 12/12/2022] Open
Abstract
Exposure of mammalian cells to oxidative stress can result in DNA damage that adversely affects many cell processes. Lack of dependable DNA damage reference materials and standardized measurement methods, despite many case-control studies hampers the wider recognition of the link between oxidatively degraded DNA and disease risk. We used bulk electrolysis in an electrochemical system and gas chromatographic mass spectrometric analysis (GC/MS/MS) to control and measure, respectively, the effect of electrochemically produced reactive oxygen species on calf thymus DNA (ct-DNA). DNA was electro-oxidized for 1 h at four fixed oxidizing potentials (E = 0.5 V, 1.0 V, 1.5 V and 2 V (vs Ag/AgCl)) using a high surface area boron-doped diamond (BDD) working electrode (WE) and the resulting DNA damage in the form of oxidatively-modified DNA lesions was measured using GC/MS/MS. We have shown that there are two distinct base lesion formation modes in the explored electrode potential range, corresponding to 0.5 V < E < 1.5 V and E > 1.5 V. Amounts of all four purine lesions were close to a negative control levels up to E = 1.5 V with evidence suggesting higher levels at the lowest potential of this range (E = 0.5 V). A rapid increase in all base lesion yields was measured when ct-DNA was exposed at E = 2 V, the potential at which hydroxyl radicals were efficiently produced by the BDD electrode. The present results demonstrate that controlled potential preparative electrooxidation of double-stranded DNA can be used to purposely increase the levels of oxidatively modified DNA lesions in discrete samples. It is envisioned that these DNA samples may potentially serve as analytical control or quality assurance reference materials for the determination of oxidatively induced DNA damage.
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Affiliation(s)
- Vytas Reipa
- Materials Measurement Laboratory, Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, Maryland, United States of America
- * E-mail:
| | - Donald H. Atha
- Materials Measurement Laboratory, Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, Maryland, United States of America
| | - Sanem H. Coskun
- Materials Measurement Laboratory, Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, Maryland, United States of America
| | - Christopher M. Sims
- Materials Measurement Laboratory, Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, Maryland, United States of America
| | - Bryant C. Nelson
- Materials Measurement Laboratory, Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, Maryland, United States of America
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7
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Shang T, Wang P, Liu X, Jiang X, Hu Z, Lu X. Facile synthesis of porous single-walled carbon nanotube for sensitive detection of 8-Hydroxy-2′-deoxyguanosine. J Electroanal Chem (Lausanne) 2018. [DOI: 10.1016/j.jelechem.2017.11.064] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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8
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Paper-Based Sensing Device for Electrochemical Detection of Oxidative Stress Biomarker 8-Hydroxy-2'-deoxyguanosine (8-OHdG) in Point-of-Care. Sci Rep 2017; 7:14558. [PMID: 29109407 PMCID: PMC5673927 DOI: 10.1038/s41598-017-14878-9] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2017] [Accepted: 09/13/2017] [Indexed: 11/16/2022] Open
Abstract
This work presents a cost-effective, label-free in point-of-care (POC) biosensor for the sensitive detection of 8-hydroxy-2′-deoxyguanosine (8-OHdG), the most abundant oxidative product of DNA, that may allow a premature assessment of cancer disease, thereby improving diagnosis, prognostics and survival rates. The device targets the direct detection of 8-OHdG by using for the first time a carbon-ink 3-electrode on a paper substrate coupled to Differential Pulse Voltammetry readings. This design was optimized by adding nanostructured carbon materials to the ink and the conducting polymer PEDOT, enhancing the electrocatalytic properties of the sensor towards 8-OHdG detection. Meanwhile, the ability of this oxidative stress biomarker to undertake an oxidation reaction enabled the development of the sensing electrochemical device without the need of chemical probes and long incubation periods. This paper-modified sensor presented high electrochemical performance on the oxidation of 8-OHdG with a wide linear range (50–1000 ng/ml) and a low detection limit (14.4 ng/ml). Thus, our results showed the development of a direct and facile sensor with good reproducibility, stability, sensitivity and more importantly, selectivity. The proposed carbon-based electrochemical sensor is a potential candidate to be miniaturized to small portable size, which make it applicable for in-situ 8-OHdG sensing in real biological samples.
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9
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Tandel RD, Naik RS, Seetharamappa J. Electrochemical Characteristics and Electrosensing of an Antiviral Drug, Entecavir via Synergic Effect of Graphene Oxide Nanoribbons and Ceria Nanorods. ELECTROANAL 2017. [DOI: 10.1002/elan.201600492] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | - Roopa S. Naik
- Department of Chemistry; Karnatak University; Dharwad 580 003 India
| | - J. Seetharamappa
- Department of Chemistry; Karnatak University; Dharwad 580 003 India
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10
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Gupta P, Oyama M, Goyal RN. Electrochemical investigations of 8-hydroxydeoxyguanosine and its determination at an edge plane pyrolytic graphite electrode. RSC Adv 2016. [DOI: 10.1039/c5ra22682a] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Electrochemical oxidation of 8-hydroxydeoxyguanosine (8-OHdG) and its detection with low detection limit is reported at pyrolytic graphite electrode.
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Affiliation(s)
- Pankaj Gupta
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee – 247667
- India
| | - Munetaka Oyama
- Department of Material Chemistry
- Graduate School of Engineering
- Kyoto University
- Kyoto – 615 – 8520
- Japan
| | - Rajendra N. Goyal
- Department of Chemistry
- Indian Institute of Technology Roorkee
- Roorkee – 247667
- India
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11
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Zhu X, Shah P, Stoff S, Liu H, Li CZ. A paper electrode integrated lateral flow immunosensor for quantitative analysis of oxidative stress induced DNA damage. Analyst 2015; 139:2850-7. [PMID: 24733353 DOI: 10.1039/c4an00313f] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel device combining electrochemical and colorimetric detection is developed for the rapid measurement of 8-hydroxy-2'-deoxyguanosine (8-OHdG), a DNA oxidative damage biomarker. The device takes advantage of the speed and low cost of the conventional strip test as well as the high reliability and accuracy of the electrochemical assay. Competitive immunoreactions were performed on the lateral flow strip, and the captured 8-OHdG on the control line was determined by chronoamperometric measurement with carbon nanotube paper as the working electrode. At the same time, the color intensity of the test line was measured by a scanner and analyzed by the ImageJ software. The device was able to detect 8-OHdG concentrations in PBS as low as 2.07 ng mL(-1) by the colorimetric method and 3.11 ng mL(-1) by the electrochemical method. Furthermore, the device was successfully utilized to detect 8-OHdG in urine with a detection limit of 5.76 ng mL(-1) (colorimetric method) and 8.85 ng mL(-1) (electrochemical method), respectively. In conclusion, the integrated device with dual detection methods can provide a rapid, visual, quantitative and feasible detection method for 8-OHdG. The integration of these two methods holds two major advantages over tests based on a single method. Firstly, it can provide double confidence on the same assay. Secondly, by involving two methods that differ in principle, the integration could potentially avoid false results coming from one method. In addition, these methods do not require expensive equipment or trained personnel, making it suitable for use as a simple, economical, portable field kit for on-site monitoring of 8-OHdG in a variety of clinical settings.
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Affiliation(s)
- Xuena Zhu
- Nanobioengineering/Bioelectronics Laboratory, Department of Biomedical Engineering, Florida International University, 10555 West Flagler Street, Miami, FL 33174, USA.
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12
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Ribaut C, Bordeau G, Perio P, Reybier K, Sartor V, Reynes O, Fabre PL, Chouini-Lalanne N. EPR Spectroelectrochemical Investigation of Guanine Radical Formation and Environment Effects. J Phys Chem B 2014; 118:2360-5. [DOI: 10.1021/jp500952q] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Clotilde Ribaut
- Université de Toulouse/Université Paul Sabatier, Laboratoire des IMRCP, Bat 2R1, 118 route de Narbonne, 31062 Toulouse cedex 09, France
- CNRS, Laboratoire
IMRCP, UMR 5623, 31062 Toulouse cedex 09, France
| | - Guillaume Bordeau
- Université de Toulouse/Université Paul Sabatier, Laboratoire des IMRCP, Bat 2R1, 118 route de Narbonne, 31062 Toulouse cedex 09, France
- CNRS, Laboratoire
IMRCP, UMR 5623, 31062 Toulouse cedex 09, France
| | - Pierre Perio
- Université de Toulouse/Université Paul Sabatier, Laboratoire Pharma-Dev, UMR152, 31062 Toulouse cedex 09, France
- IRD, Laboratoire
Pharma-Dev, UMR 152, 31062 Toulouse cedex 09, France
| | - Karine Reybier
- Université de Toulouse/Université Paul Sabatier, Laboratoire Pharma-Dev, UMR152, 31062 Toulouse cedex 09, France
- IRD, Laboratoire
Pharma-Dev, UMR 152, 31062 Toulouse cedex 09, France
| | - Valérie Sartor
- Université de Toulouse/Université Paul Sabatier, Laboratoire des IMRCP, Bat 2R1, 118 route de Narbonne, 31062 Toulouse cedex 09, France
- CNRS, Laboratoire
IMRCP, UMR 5623, 31062 Toulouse cedex 09, France
| | - Olivier Reynes
- Université de Toulouse/Université Paul Sabatier, Laboratoire de Génie Chimique, Bat 2R1, 118 route de Narbonne, 31062 Toulouse cedex 09, France
- CNRS, LGC, UMR
5503, 31062 Toulouse
cedex 09, France
| | - Paul-Louis Fabre
- Université de Toulouse/Université Paul Sabatier, Laboratoire de Génie Chimique, Bat 2R1, 118 route de Narbonne, 31062 Toulouse cedex 09, France
- CNRS, LGC, UMR
5503, 31062 Toulouse
cedex 09, France
| | - Nadia Chouini-Lalanne
- Université de Toulouse/Université Paul Sabatier, Laboratoire des IMRCP, Bat 2R1, 118 route de Narbonne, 31062 Toulouse cedex 09, France
- CNRS, Laboratoire
IMRCP, UMR 5623, 31062 Toulouse cedex 09, France
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13
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Song B, Pan S, Tang C, Li D, Rusling JF. Voltammetric microwell array for oxidized guanosine in intact ds-DNA. Anal Chem 2013; 85:11061-7. [PMID: 24164630 PMCID: PMC3856883 DOI: 10.1021/ac402736q] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Oxidative stress in humans causes damage to biomolecules by generating reactive oxygen species (ROS). DNA can be oxidatively damaged by ROS, which may lead to carcinogenesis. Here we report a microfluidic electrochemical array designed to rapidly detect oxidation in intact DNA in replicate measurements. Sensor arrays were fabricated by wet-chemistry patterning of gold compact discs. The eight-sensor array is incorporated into a 60 μL microfluidic channel connected to a pump and sample valve. The array features 7 nm thick osmium bipyridyl poly(vinylpyridine) chloride [Os(bpy)2(PVP)10Cl](+) films assembled layer-by-layer with polyions onto the gold sensors. 8-Hydroxy-7,8-hydro-2'-deoxyguanosine (8-oxodG) is selectively oxidized by [Os(bpy)2(PVP)10Cl](+) in intact ds-DNA to provide catalytic square wave voltammograms (SWV). The device is easy-to-use, fast, inexpensive, reusable, and can detect one 8-oxodG per 6600 nucleobases. The mass detection limit is 150-fold lower than a previously reported dip-and-read voltammetric sensor for oxidized DNA. Fast assays (<1 min) and moderate sample consumption (15 pmol DNA) suggest potential for research and clinical applications. Practical use is illustrated by detecting DNA oxidation from cigarette smoke and ash extracts in dispersions with NADPH and Cu(2+).
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Affiliation(s)
- Boya Song
- Department of Chemistry, University of Connecticut , Storrs, CT 06269, United States
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Zhao J, Yang H, Zhang M, Bu Y. Interactions of amino acids with oxidized guanine in the gas phase associated with the protection of damaged DNA. Chemphyschem 2013; 14:1031-42. [PMID: 23427004 DOI: 10.1002/cphc.201200979] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2012] [Revised: 01/16/2013] [Indexed: 11/11/2022]
Abstract
Density functional theory calculations were employed to study the stabilization process of the guanine radical cation through amino acid interactions as well as to understand the protection mechanisms. On the basis of our calculations, several protection mechanisms are proposed in this work subject to the type of the amino acid. Our results indicate that a series of three-electron bonds can be formed between the amino acids and the guanine radical cation which may serve as relay stations supporting hole transport. In the three-electron-bonded, π-π-stacked, and H-bonded modes, amino acids can protect guanine from oxidation or radiation damage by sharing the hole, while amino acids with reducing properties can repair the guanine radical cation through proton-coupled electron transfer or electron transfer. Another important finding is that positively charged amino acids (ArgH(+), LysH(+), and HisH(+)) can inhibit ionization of guanine through raising its ionization potential. In this situation, a negative dissociation energy for hydrogen bonds in the hole-trapped and positively charged amino acid-Guanine dimer is observed, which explains the low hole-trapping efficiency. We hope that this work provides valuable information on how to protect DNA from oxidation- or radiation-induced damages in biological systems.
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Affiliation(s)
- Jing Zhao
- The Center for Modeling & Simulation Chemistry, Institute of Theoretical Chemistry, Shandong University, Jinan, 250100, P. R. China
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15
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Wang M, Zhao J, Bu Y. Theoretical exploration of structures and electronic properties of double-electron oxidized guanine–cytosine base pairs with intriguing radical–radical interactions. Phys Chem Chem Phys 2013; 15:18453-63. [DOI: 10.1039/c3cp52745j] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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16
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Kato T, Totsuka Y, Ishino K, Matsumoto Y, Tada Y, Nakae D, Goto S, Masuda S, Ogo S, Kawanishi M, Yagi T, Matsuda T, Watanabe M, Wakabayashi K. Genotoxicity of multi-walled carbon nanotubes in bothin vitroandin vivoassay systems. Nanotoxicology 2012; 7:452-61. [DOI: 10.3109/17435390.2012.674571] [Citation(s) in RCA: 75] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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17
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Karady M, Novák O, Horna A, Strnad M, Doležal K. High Performance Liquid Chromatography-Electrochemistry-Electrospray Ionization Mass Spectrometry (HPLC/EC/ESI-MS) for Detection and Characterization of Roscovitine Oxidation Products. ELECTROANAL 2011. [DOI: 10.1002/elan.201100383] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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18
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Totsuka Y, Kato T, Masuda SI, Ishino K, Matsumoto Y, Goto S, Kawanishi M, Yagi T, Wakabayashi K. In Vitro and In Vivo Genotoxicity Induced by Fullerene (C60) and Kaolin. Genes Environ 2011. [DOI: 10.3123/jemsge.33.14] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
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19
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Cui L, Li L, Ai S, Yin H, Ju P, Liu T. Electrochemical behaviors of GMP based on solid-phase extractionon at Cu-Mg-Al hydrotalcite-like compound (HTLC) modified glass carbon electrode. J Solid State Electrochem 2010. [DOI: 10.1007/s10008-010-1185-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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20
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Prabhulkar S, Li CZ. Assessment of oxidative DNA damage and repair at single cellular level via real-time monitoring of 8-OHdG biomarker. Biosens Bioelectron 2010; 26:1743-9. [PMID: 20863679 DOI: 10.1016/j.bios.2010.08.029] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2010] [Revised: 08/08/2010] [Accepted: 08/12/2010] [Indexed: 02/07/2023]
Abstract
8-Hydroxydeoxyguanosine (8-OHdG) is the most important and best-documented biomarker of oxidative stress, which is involved in the instigation of various diseases. 8-OHdG levels correlate to oxidative DNA damage which is known to be the root cause of a variety of age-related chronic diseases. The purpose of our research was to develop a detection strategy capable of measuring 8-OHdG in real-time at the surface of a single cell. Activated carbon fiber microelectrodes were used as the sensing platform. The microelectrodes were used to measure 8-OHdG release from single lung epithelial cells under the influence of nicotine. In order to evaluate the direct role of nicotine in tobacco induced genotoxicity, we studied the influence of parameters such as nicotine concentration and exposure times on 8-OHdG secretion. 2-8 mM nicotine solutions induced dose-dependent DNA damage in single cells, which was observed via amperometric measurements of secreted 8-OHdG biomarker. Real-time 8-OHdG measurements from single cells exposed to 4 mM nicotine solution revealed cessation of 8-OHdG secretion after 110 min. We have successfully outlined a methodology to detect 8-OHdG at the surface of single cells. A similar protocol can be used to evaluate oxidative DNA damage and repair mechanisms in other disease models.
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Affiliation(s)
- Shradha Prabhulkar
- Nanobioengineering/Bioelectronics Laboratory, Department of Biomedical Engineering, Florida International University, 10555 West Flagler Street, Miami, FL 33174, United States
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Mehrgardi MA, Barfidokht A. Electrocatalytic activity of thianthrene toward one-electron oxidation of guanosine and DNA in a non-aqueous medium. J Electroanal Chem (Lausanne) 2010. [DOI: 10.1016/j.jelechem.2010.03.028] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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22
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The oxidation of 8-oxo-7,8-dihydroguanine by iodine. Bioorg Med Chem Lett 2010; 20:3818-20. [PMID: 20471257 DOI: 10.1016/j.bmcl.2010.04.032] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2009] [Revised: 03/17/2010] [Accepted: 04/09/2010] [Indexed: 11/20/2022]
Abstract
8-Oxo-7,8-dihydroguanine was specifically oxidized by iodine with aqueous KI. Under acidic conditions, the major product was dehydro-guanidinohydantoin. Under basic conditions, two diastereoisomers of spirohydantoin were chiefly obtained. In addition, unstable diimine was detected for the first time.
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23
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Cao Y, Wang J, Xu Y, Li G. Sensing purine nucleoside phosphorylase activity by using silver nanoparticles. Biosens Bioelectron 2010; 25:1032-6. [DOI: 10.1016/j.bios.2009.09.021] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2009] [Revised: 08/27/2009] [Accepted: 09/14/2009] [Indexed: 11/25/2022]
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24
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Wang Y, Li J, Liu Y, Ma R, Jia W, Cui H, Wang H. Fabrication of the DNA/poly(3-methylthiophene) composite film modified electrode and its application for the study on the voltammetric behavior and determination of 8-hydroxy-2′-deoxyguanosine. ACTA ACUST UNITED AC 2009. [DOI: 10.1007/s11426-009-0241-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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25
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Sun W, Li Y, Duan Y, Jiao K. Direct electrochemistry of guanosine on multi-walled carbon nanotubes modified carbon ionic liquid electrode. Electrochim Acta 2009. [DOI: 10.1016/j.electacta.2009.02.041] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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26
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González-Fernández E, de-los-Santos-Álvarez N, Lobo-Castañón M, Miranda-Ordieres A, Tuñón-Blanco P. Electrochemical Oxidation of Guanosine and Xanthosine at Physiological pH: Further Evidences of a Convergent Mechanism for the Oxidation of Purine Nucleosides. ELECTROANAL 2008. [DOI: 10.1002/elan.200704153] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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27
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de-los-Santos-Álvarez N, Lobo-Castañón MJ, Miranda-Ordieres AJ, Tuñón-Blanco P. Electrocatalytic activity of oxidation products of guanine and 5′-GMP towards the oxidation of NADH. Electrochim Acta 2007. [DOI: 10.1016/j.electacta.2007.07.062] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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28
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Honeychurch KC, O'Donovan MR, Hart JP. Voltammetric behaviour of DNA bases at a screen-printed carbon electrode and its application to a simple and rapid voltammetric method for the determination of oxidative damage in double stranded DNA. Biosens Bioelectron 2007; 22:2057-64. [PMID: 17055244 DOI: 10.1016/j.bios.2006.09.019] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2006] [Revised: 09/04/2006] [Accepted: 09/07/2006] [Indexed: 10/24/2022]
Abstract
Screen-printed carbon electrodes (SPCEs) have been investigated as possible sensors to identify gamma-irradiation induced oxidative damage in double stranded (ds) DNA. Studies were undertaken to explore the possibility of using both cyclic voltammetry and differential pulse voltammetry to identify changes due to oxidative damage. Initially, guanine, adenine and 8-oxoguanosine were examined and it was found possible to differentiate them from their voltammetric responses. The voltammetric response of 8-oxoguanosine was found to be linear over the concentration range 1-400 microM, with a slope of 0.0296 microA microM(-1) (R2 value of 0.9984), in the presence of 2mM concentrations of guanine and adenine. Investigations were made into harnessing these findings to identify oxidative damage in gamma-irradiated dsDNA. The presence of oxidative damage in these samples was readily identifiable, and the magnitude of the voltammetric response was found to be dose dependant (R2=0.9919). A simple sample preparation step involving only the dissolution of double stranded DNA sample in the optimised electrolyte (0.1M acetate buffer pH 4.5) was required. This report appears to be first describing the use of a SPCE to detect DNA damage which can be related to the dose of gamma-radiation used.
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Affiliation(s)
- Kevin C Honeychurch
- Centre for Research in Analytical, Materials and Sensors Science, Faculty of Applied Sciences, University of the West of England, Bristol, Frenchay Campus, Coldharbour Lane, Bristol BS16 1QY, UK
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30
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Li TH, Jia WL, Wang HS, Liu RM. Electrochemical performance of 8-hydroxy-2′-deoxyguanosine and its detection at poly(3-methylthiophene) modified glassy carbon electrode. Biosens Bioelectron 2007; 22:1245-50. [PMID: 16777402 DOI: 10.1016/j.bios.2006.05.005] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2006] [Revised: 04/17/2006] [Accepted: 05/02/2006] [Indexed: 10/24/2022]
Abstract
8-Hydroxy-2'-deoxyguanosine (8-OH-dG) has attracted enormous attention in recent years because it has been acknowledged as a typical biomarker of oxidative DNA damage. In this paper, the electrochemical performance of 8-OH-dG at the poly(3-methylthiophene) (P3MT) modified glassy carbon electrode (GCE) was investigated by cyclic voltammetry (CV) and linear sweep voltammetry (LSV). The conducting polymer P3MT can effectively decrease the oxidation peak potential of 8-OH-dG and greatly enhance its peak current. In 0.1 M pH 7.0 phosphate buffer solution (PBS), the anodic peak currents of cyclic voltammograms are linear with the 8-OH-dG concentration in two intervals, viz. 0.700-35.0 microM and 35.0-70.0 microM, with the correlative coefficients of 0.9992 and 0.9995, respectively. The detection limit of 8-OH-dG can be estimated to be 0.100 microM (S/N=3). This modified electrode can be used to detect the amount of 8-OH-dG in human urine. Furthermore, the effects of scan rate, pH, and interference of uric acid (UA) for the voltammetric behavior and detection of 8-OH-dG are also discussed. This proposed modified electrode also shows excellent reproducibility and stability that makes it an ideal candidate for amperometric detection of 8-OH-dG in flow injection analysis (FIA) and high performance liquid chromatography (HPLC).
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Affiliation(s)
- Tian-Hua Li
- Department of Chemistry, Institute of Analytical Chemistry, Liaocheng University, Liaocheng 252059, PR China
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31
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Paixão TR, Bertotti M. Electrocatalytic oxidation of deoxyguanosine on a glassy carbon electrode modified with a ruthenium oxide hexacyanoferrate film. Electrochim Acta 2007. [DOI: 10.1016/j.electacta.2006.08.035] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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32
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Goyal RN, Dhawan A. Oxidation chemistry of 2′-deoxyadenosine at pyrolytic graphite electrode. Bioelectrochemistry 2006; 69:223-33. [PMID: 16675309 DOI: 10.1016/j.bioelechem.2006.03.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2006] [Revised: 02/27/2006] [Accepted: 03/15/2006] [Indexed: 11/29/2022]
Abstract
The electrochemical oxidation of 2'-deoxyadenosine has been investigated in phosphate containing supporting electrolytes in pH range 2-10 at a pyrolytic graphite electrode by cyclic sweep voltammetry, spectral studies, controlled potential electrolysis and related techniques. The oxidation of 2'-deoxyadenosine occurred in a single well-defined oxidation peak (I(a)), over the entire pH range. The electrooxidation occurred by the loss of 6.0+/-0.5 e(-) per mole over the entire pH range. The kinetics of the decay of the UV-absorbing intermediates has been studied and found to follow pseudo first order kinetics having rate constant (k) in the range (5.7-7.7)x10(-4) s(-1). The major products of electrooxidation were separated by HPLC and characterized by GC-MS/MS, (1)H NMR and a tentative mechanism for electrooxidation of 2'-deoxyadenosine has been suggested.
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Affiliation(s)
- Rajendra N Goyal
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee-247 667, India.
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33
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Liu N, Ban F, Boyd RJ. Modeling Competitive Reaction Mechanisms of Peroxynitrite Oxidation of Guanine. J Phys Chem A 2006; 110:9908-14. [PMID: 16898693 DOI: 10.1021/jp061297b] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
5-Guanidino-4-nitroimidazole is a stable product from the peroxynitrite induced one-electron oxidation of guanine. Reaction mechanisms to form the 5-guanidino-4-nitroimidazole as well as 8-nitroguanine, through the combination of the guanine radical cation and nitrogen dioxide radical and through the combination of the deprotonated neutral guanine radical and nitrogen dioxide radical, have been investigated by the use of the B3LYP method of density functional theory. Our calculations suggest that the guanine radical cation mechanism is preferred over the neutral guanine radical mechanism and that a water molecule is involved in the reaction as a catalyst or as a reactant.
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Affiliation(s)
- Ning Liu
- Department of Chemistry, Dalhousie University, Halifax, NS, Canada B3H 4J3
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34
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Goyal RN, Sondhi SM, Lahoti AM. Electrochemical Investigations of Biologically Active 1-(3-Hydroxy-2-pyridyl)-4,4,6-trimethyl-3,4-dihydropyrimidine-2[1H]-thione at Pyrolytic Graphite Electrode. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2006. [DOI: 10.1246/bcsj.79.569] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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35
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Gimisis T, Cismaş C. Isolation, Characterization, and Independent Synthesis of Guanine Oxidation Products. European J Org Chem 2006. [DOI: 10.1002/ejoc.200500581] [Citation(s) in RCA: 66] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Thanasis Gimisis
- Department of Chemistry, University of Athens, Panepistimiopolis, 15771 Athens, Greece
| | - Crina Cismaş
- Department of Chemistry, University of Athens, Panepistimiopolis, 15771 Athens, Greece
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36
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Niles JC, Wishnok JS, Tannenbaum SR. Peroxynitrite-induced oxidation and nitration products of guanine and 8-oxoguanine: structures and mechanisms of product formation. Nitric Oxide 2005; 14:109-21. [PMID: 16352449 DOI: 10.1016/j.niox.2005.11.001] [Citation(s) in RCA: 152] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2005] [Revised: 11/03/2005] [Accepted: 11/04/2005] [Indexed: 12/29/2022]
Abstract
Peroxynitrite induces DNA base damage predominantly at guanine (G) and 8-oxoguanine (8-oxoG) nucleobases via oxidation reactions. Nitration products are also observed, consistent with the generation of radical intermediates that can recombine with the (.)NO(2) formed during peroxynitrite degradation. The neutral G radical, G(.), reacts with (.)NO(2) to yield 8-nitroguanine (8-nitroG) and 5-nitro-4-guanidinohydantoin (NI), while for 8-oxoG we have proposed a reactive guanidinylidene radical intermediate. The products generated during peroxynitrite-mediated 8-oxoG oxidation depend on oxidant flux, with dehydroguanidinohydantoin (DGh), 2,4,6-trioxo-[1,3,5]triazinane-1-carboxamidine (CAC) and NO(2)-DGh predominating at high fluxes and spiroiminodihydantoin (Sp), guanidinohydantoin (Gh) and 4-hydroxy-2,5-dioxo-imidazolidine-4-carboxylic acid (HICA) predominating at low fluxes. Both product sets are observed at intermediate fluxes. It is therefore important in model systems to ensure that the relative concentrations are well controlled to minimize competing reactions that may not be relevant in vivo. Increasingly sophisticated systems for modeling peroxynitrite production in vivo are being developed and these should help with predicting the products most likely to be formed in vivo. Together with the emerging information on the genotoxic and mutational characteristics of the individual oxidation products, it may be found that the extent of tissue damage, mutational spectra and, hence, cancer risk may change as a function of peroxynitrite fluxes as different product combinations predominate.
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Affiliation(s)
- Jacquin C Niles
- Biological Engineering Division, Massachusetts Institute of Technology, Cambridge, 02139, USA
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37
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Kupan A, Saulière A, Broussy S, Seguy C, Pratviel G, Meunier B. Guanine Oxidation by Electron Transfer: One- versus Two-Electron Oxidation Mechanism. Chembiochem 2005; 7:125-33. [PMID: 16323222 DOI: 10.1002/cbic.200500284] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The degeneracy of the guanine radical cation, which is formed in DNA by oxidation of guanine by electron transfer, was studied by a detailed analysis of the oxidation products of guanine on oligonucleotide duplexes and by labeling experiments. It was shown that imidazolone, the major product of guanine oxidation, is formed through a one-electron oxidation process and incorporates one oxygen atom from O2. The formation of 8-oxo-7,8-dihydroguanine by a two-electron oxidation process was a minor pathway. The two-electron oxidation mechanism was also evidenced by the formation of a tris(hydroxymethyl)aminomethane adduct.
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Affiliation(s)
- Adam Kupan
- Laboratoire de Chimie de Coordination du CNRS, 205 route de Narbonne, 31077 Toulouse Cedex4, France
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38
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Goyal RN, Dhawan A. Insights into the Biological Redox Chemistry of 2′-Deoxyadenosine 5′-Monophosphate by Electrochemical Techniques. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2005. [DOI: 10.1246/bcsj.78.1944] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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39
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Goyal RN, Tyagi A. Investigations into the electrooxidation of guanosine-5'-triphosphate at the pyrolytic graphite electrode. Anal Bioanal Chem 2005; 382:1683-90. [PMID: 16007444 DOI: 10.1007/s00216-005-3344-8] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2005] [Revised: 05/16/2005] [Accepted: 05/18/2005] [Indexed: 11/25/2022]
Abstract
The electrochemical oxidation of guanosine-5'-triphosphate has been investigated in phosphate-containing electrolytes in the pH range 1.5-10.9 at a pyrolytic graphite electrode by cyclic sweep voltammetry, spectral studies, bulk electrolysis and related techniques. In this pH range, the oxidation occurred in a single well-defined peak (Ia). The peak potential of oxidation peaks (Ep) was found to be dependent on pH, concentration and sweep rate. The kinetics of the UV-absorbing intermediates was followed spectrophotometrically and the decay of the intermediate occurred in a pseudo-first-order reaction. The first-order rate constants for the disappearance of the UV-absorbing intermediate have also been calculated. The products of the electrode reaction were characterized by HPLC and GC/MS. A tentative mechanism for the formation of the products has also been suggested.
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Affiliation(s)
- Rajendra N Goyal
- Department of Chemistry, Indian Institute of Technology Roorkee, Roorkee, 247667, India.
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40
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Goyal RN, Sondhi SM, Lahoti AM. Investigations of electron-transfer reactions and the redox mechanism of 2′-deoxyguanosine-5′-monophosphate using electrochemical techniques. NEW J CHEM 2005. [DOI: 10.1039/b415452p] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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41
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Samcová E, Marhol P, Opekar F, Langmaier J. Determination of urinary 8-hydroxy-2′-deoxyguanosine in obese patients by HPLC with electrochemical detection. Anal Chim Acta 2004. [DOI: 10.1016/j.aca.2004.04.018] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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42
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Martinez GR, Medeiros MHG, Ravanat JL, Cadet J, Di Mascio P. [18O]-labeled singlet oxygen as a tool for mechanistic studies of 8-oxo-7,8-dihydroguanine oxidative damage: detection of spiroiminodihydantoin, imidazolone and oxazolone derivatives. Biol Chem 2002; 383:607-17. [PMID: 12033450 DOI: 10.1515/bc.2002.063] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
A water-soluble [18O]-labeled endoperoxide derived from N,N'-di(2,3-dihydroxypropyl)-1,4-naphthalene-dipropanamide (DHPN18O2) has been shown to act as a clean chemical source of [18O]-labeled molecular singlet oxygen. This allows the assessment of the singlet oxygen (1O2) reactivity toward biological targets such as DNA. The present work focuses on the qualitative identification of the main 1O2-oxidation products of 8-oxo-7,8-dihydro-2'-deoxyguanosine, which was achieved using high performance liquid chromatography coupled to electrospray ionization tandem mass spectrometry (HPLC-ESI-MS/MS). Thus, the [18O]-labeled and unlabeled imidazolone and oxazolone, together with the diastereoisomeric spiroiminodihydantoin nucleosides, were detected as the main degradation products. In addition, a modified nucleoside that exhibits similar features as those of the oxidized guanidinohydantoin molecule was detected. Our data strongly suggest that the imidazolone and oxazolone nucleosides are generated via the rearrangement of an unstable 5-hydroperoxide intermediate. Interestingly, the combined use of appropriate tools, including isotopically labeled singlet oxygen and the high- resolution HPLC-ESI-MS/MS technique, has allowed to shed new light on the 1O2-mediated oxidation reactions of guanine DNA components.
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Affiliation(s)
- Glaucia R Martinez
- Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, Brazil
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45
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Luo W, Muller JG, Rachlin EM, Burrows CJ. Characterization of spiroiminodihydantoin as a product of one-electron oxidation of 8-Oxo-7,8-dihydroguanosine. Org Lett 2000; 2:613-6. [PMID: 10814391 DOI: 10.1021/ol9913643] [Citation(s) in RCA: 207] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
[reaction: see text] Further oxidation of the common DNA lesion 8-oxo-7,8-dihydroguanosine by one-electron oxidants such as IrCl6(2-), Fe(CN)6(3-), or SO4-* leads to two major products, depending upon reaction conditions. In nucleosides at pH 7, 22 degrees C, the principal product is shown herein to be a spiroiminodihydantoin nucleoside, as a diastereomeric mixture, that can be characterized by NMR, ESI-MS/MS, and independent synthesis.
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Affiliation(s)
- W Luo
- Department of Chemistry, University of Utah, Salt Lake City 84112-0850, USA
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46
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Duarte V, Muller JG, Burrows CJ. Insertion of dGMP and dAMP during in vitro DNA synthesis opposite an oxidized form of 7,8-dihydro-8-oxoguanine. Nucleic Acids Res 1999; 27:496-502. [PMID: 9862971 PMCID: PMC148206 DOI: 10.1093/nar/27.2.496] [Citation(s) in RCA: 139] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Oxidative damage to DNA bases commonly resultsin the formation of oxidized purines, particularly 7,8-dihydro-8-oxoguanine (8-oxoG) and 7,8-dihydro-8-oxoadenine (8-oxoA), the former being a well-known mutagenic lesion. Since 8-oxoG is readily subject to further oxidation compared with normal bases, the insertion of a base during DNA synthesis opposite an oxidized form of 8-oxoG was investigated in vitro. A synthetic template containing a single 8-oxoG lesion was first treated with different one-electron oxidants or under singlet oxygen conditions and then subjected to primer extension catalyzed by Klenow fragment exo- (Kf exo-), calf thymus DNA polymerase alpha (pol alpha) or human DNA polymerase beta (pol beta). Consistent with previous reports, dAMP and dCMP are inserted selectively opposite 8-oxoG with all three DNA polymerases. Interestingly, oxidation of 8-oxoG was found to induce dAMP and dGMP insertion opposite the lesion by Kf exo- with transient inhibition of primer extension occurring at the site of the modified base. Furthermore, the lesion constitutes a block during DNA synthesis by pol alpha and pol beta. Experiments with an 8-oxoA-modified template oligonucleotide show that both 8-oxoA and an oxidized form of 8-oxoA direct insertion of dTMP by Kf exo-. Mass spectrometric analysis of 8-oxoG-containing oligonucleotides before and after oxidation with IrCl62-are consistent with oxidation of primarily the 8-oxoG site, resulting in formation of a guanidinohydantoin moiety as the major product. No evidence for formation of abasic sites was obtained. These results demonstrate that an oxidized form of 8-oxoG, possibly guanidinohydantoin, may direct misreading and misinsertion of dNTPs during DNA synthesis. If such a process occurred in vivo, it would represent a point mutagenic lesion leading to G-->T and G-->C transversions. However, the corresponding oxidized form of 8-oxoA primarily shows correct insertion of T during DNA synthesis with Kf exo-.
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Affiliation(s)
- V Duarte
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT 84112-0850, USA
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