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Rasouli E, Shahnavaz Z, Basirun WJ, Rezayi M, Avan A, Ghayour-Mobarhan M, Khandanlou R, Johan MR. Advancements in electrochemical DNA sensor for detection of human papilloma virus - A review. Anal Biochem 2018; 556:136-144. [PMID: 29981317 DOI: 10.1016/j.ab.2018.07.002] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2018] [Revised: 07/01/2018] [Accepted: 07/03/2018] [Indexed: 12/29/2022]
Abstract
Human papillomavirus (HPV) is one of the most common sexually transmitted disease, transmitted through intimate skin contact or mucosal membrane. The HPV virus consists of a double-stranded circular DNA and the role of HPV virus in cervical cancer has been studied extensively. Thus it is critical to develop rapid identification method for early detection of the virus. A portable biosensing device could give rapid and reliable results for the identification and quantitative determination of the virus. The fabrication of electrochemical biosensors is one of the current techniques utilized to achieve this aim. In such electrochemical biosensors, a single-strand DNA is immobilized onto an electrically conducting surface and the changes in electrical parameters due to the hybridization on the electrode surface are measured. This review covers the recent developments in electrochemical DNA biosensors for the detection of HPV virus. Due to the several advantages of electrochemical DNA biosensors, their applications have witnessed an increased interest and research focus nowadays.
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Affiliation(s)
- Elisa Rasouli
- Nanotechnology & Catalysis Research Centre, Institute of Postgraduate Studies, University of Malaya, 50603, Kuala Lumpur, Malaysia; Department of Chemistry, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
| | - Zohreh Shahnavaz
- Nanotechnology & Catalysis Research Centre, Institute of Postgraduate Studies, University of Malaya, 50603, Kuala Lumpur, Malaysia.
| | - Wan Jefrey Basirun
- Nanotechnology & Catalysis Research Centre, Institute of Postgraduate Studies, University of Malaya, 50603, Kuala Lumpur, Malaysia; Department of Chemistry, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
| | - Majid Rezayi
- Department of Modern Sciences and Technologies, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
| | - Amir Avan
- Department of Modern Sciences and Technologies, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
| | - Majid Ghayour-Mobarhan
- Department of Modern Sciences and Technologies, School of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
| | - Roshanak Khandanlou
- School of Applied and Biomedical Sciences, Faculty of Science and Technology, Federation University, 3350, Ballarat, Australia.
| | - Mohd Rafie Johan
- Nanotechnology & Catalysis Research Centre, Institute of Postgraduate Studies, University of Malaya, 50603, Kuala Lumpur, Malaysia.
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Nikoleli GP, Nikolelis DP, Evtugyn G, Hianik T. Advances in lipid film based biosensors. Trends Analyt Chem 2016. [DOI: 10.1016/j.trac.2016.01.021] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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3
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Electrochemical DNA biosensor for the detection of human papillomavirus E6 gene inserted in recombinant plasmid. ARAB J CHEM 2016. [DOI: 10.1016/j.arabjc.2014.05.023] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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Nikolelis DP, Hianik T, Nikoleli GP. Stabilized Lipid Films in Electrochemical Biosensors. ELECTROANAL 2010. [DOI: 10.1002/elan.201000420] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Chai C, Takhistov P. Label-free toxin detection by means of time-resolved electrochemical impedance spectroscopy. SENSORS (BASEL, SWITZERLAND) 2010; 10:655-69. [PMID: 22315560 PMCID: PMC3270861 DOI: 10.3390/s100100655] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/20/2009] [Revised: 12/07/2009] [Accepted: 12/10/2009] [Indexed: 11/16/2022]
Abstract
The real-time detection of trace concentrations of biological toxins requires significant improvement of the detection methods from those reported in the literature. To develop a highly sensitive and selective detection device it is necessary to determine the optimal measuring conditions for the electrochemical sensor in three domains: time, frequency and polarization potential. In this work we utilized a time-resolved electrochemical impedance spectroscopy for the detection of trace concentrations of Staphylococcus enterotoxin B (SEB). An anti-SEB antibody has been attached to the nano-porous aluminum surface using 3-aminopropyltriethoxysilane/glutaraldehyde coupling system. This immobilization method allows fabrication of a highly reproducible and stable sensing device. Using developed immobilization procedure and optimized detection regime, it is possible to determine the presence of SEB at the levels as low as 10 pg/mL in 15 minutes.
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Affiliation(s)
- Changhoon Chai
- School of Environmental and Biological Sciences, Rutgers, the State University of New Jersey, New Brunswick, NJ 08901, USA; E-Mail:
| | - Paul Takhistov
- School of Environmental and Biological Sciences, Rutgers, the State University of New Jersey, New Brunswick, NJ 08901, USA; E-Mail:
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Ahmed MU, Saito M, Hossain MM, Rao SR, Furui S, Hino A, Takamura Y, Takagi M, Tamiya E. Electrochemical genosensor for the rapid detection of GMO using loop-mediated isothermal amplification. Analyst 2009; 134:966-72. [DOI: 10.1039/b812569d] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Mora MF, Felhofer J, Ayon A, Garcia CD. Surfactants as a Preferred Option to Improve Separation and Electrochemical Detection in Capillary Electrophoresis. ANAL LETT 2008. [DOI: 10.1080/00032710701792927] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Ahmed MU, Idegami K, Chikae M, Kerman K, Chaumpluk P, Yamamura S, Tamiya E. Electrochemical DNA biosensor using a disposable electrochemical printed (DEP) chip for the detection of SNPs from unpurified PCR amplicons. Analyst 2007; 132:431-8. [PMID: 17471389 DOI: 10.1039/b615242b] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this study, we are reporting for the first time the elucidation of single nucleotide polymorphisms (SNPs) of clinically important alleles from consenting human subjects using a disposable electrochemical printed (DEP) chip in connection with differential pulse voltammetry (DPV) and a redox active molecule Hoechst 33258 [H33258, 2'-(4-hydroxyphenyl)-5-(4-methyl-1-piperazinyl)-2,5'-bi(1H-benzimidazole)]. Post-PCR products were analyzed directly without any purification process. The aggregation of the DNA-H33258 complex causes a significant drop in the peak current intensity of H33258 oxidation. The phenomenon of DNA aggregation induced by H33258 in addition to changes in anodic current peak are used to detect SNPs. Since laborious probe immobilization was not required, our biosensor offers several benefits due to its simplicity and rapid response as a promising device for genetic analysis.
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Affiliation(s)
- Minhaz Uddin Ahmed
- School of Materials Science, Japan Advanced Institute of Science and Technology (JAIST), 1-1 Asahidai, Nomi City, Ishikawa 923-1292, Japan
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Pejcic B, De Marco R. Impedance spectroscopy: Over 35 years of electrochemical sensor optimization. Electrochim Acta 2006. [DOI: 10.1016/j.electacta.2006.04.025] [Citation(s) in RCA: 188] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Rivas GA, Pedano ML, Ferreyra NF. Electrochemical Biosensors for Sequence‐Specific DNA Detection. ANAL LETT 2005. [DOI: 10.1080/00032710500371121] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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11
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Monitoring protein binding to phospholipid monolayers using electrochemical impedance spectroscopy. Electrochim Acta 2005. [DOI: 10.1016/j.electacta.2005.05.045] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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Hao Q, Wang X, Lu L, Yang X, Mirsky VM. Electropolymerized Multilayer Conducting Polymers with Response to Gaseous Hydrogen Chloride. Macromol Rapid Commun 2005. [DOI: 10.1002/marc.200500114] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Favero G, Campanella L, Cavallo S, D'Annibale A, Perrella M, Mattei E, Ferri T. Glutamate Receptor Incorporated in a Mixed Hybrid Bilayer Lipid Membrane Array, as a Sensing Element of a Biosensor Working under Flowing Conditions. J Am Chem Soc 2005; 127:8103-11. [PMID: 15926837 DOI: 10.1021/ja042904g] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The realization of a reliable receptor biosensor requires stable, long-lasting, reconstituted biomembranes able to supply a suitable biomimetic environment where the receptor can properly work after incorporation. To this end, we developed a new method for preparing stable biological membranes that couple the biomimetic properties of BLMs (bilayer lipid membranes) with the high stability of HBMs (hybrid bilayer membranes); this gives rise to an innovative assembly, named MHBLM (mixed hybrid bilayer lipid membrane). The present work deals with the characterization of biosensors achieved by embedding an ionotropic glutamate receptor (GluR) on MHBLM. Thanks to signal (transmembrane current) amplification, which is typical of natural receptors, the biosensor here produced detects glutamate at a level of nmol L(-1). The transmembrane current changes linearly vs glutamate up to 100 nmol L(-1), while the limit of detection is 1 nmol L(-1). In addition, the biosensor response can be modulated both by receptor agonists (glycine) and antagonists (Mg(2+)) as well, and by exploiting the biosensor response, the distribution of different kinds of ionotropic GluR present in the purified sample, and embedded in MHBLM, was also evaluated. Finally, one of the most important aspects of this investigation is represented by the high stability of the biomimetic system, which allows the use of biosensor under flowing conditions, where the solutions flow on both biomembrane faces.
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Affiliation(s)
- Gabriele Favero
- Dipartimento di Chimica and Dipartimento di Scienze Biochimiche "A. Rossi Fanelli", Università di Roma "La Sapienza", P.le Aldo Moro, 5-00185 Roma, Italy
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Lucarelli F, Marrazza G, Mascini M. Enzyme-based impedimetric detection of PCR products using oligonucleotide-modified screen-printed gold electrodes. Biosens Bioelectron 2005; 20:2001-9. [PMID: 15741069 DOI: 10.1016/j.bios.2004.08.025] [Citation(s) in RCA: 76] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2004] [Revised: 08/17/2004] [Accepted: 08/20/2004] [Indexed: 10/26/2022]
Abstract
This paper describes the optimisation and the analytical performances of an enzyme-based electrochemical genosensor, developed using disposable oligonucleotide-modified screen-printed gold electrodes. The immobilisation of a thiol-tethered probe was qualitatively investigated by means of faradic impedance spectroscopy. Impedance spectra confirmed that the thiol moiety unambiguously drives the immobilisation of the oligonucleotide probe. Furthermore, both probe surface densities and hybridisation efficiencies were quantified through chronocoulometric measurements. Electrochemical transduction of the hybridisation process was also performed by means of faradic impedance spectroscopy, after coupling of a streptavidin-alkaline phosphatase conjugate and bio-catalysed precipitation of an insoluble and insulating product onto the sensing interface. Chronocoulometric results allowed discussion of the magnitude of hybridisation signals in terms of probe surface densities and their corresponding hybridisation efficiency. The genosensor response varied linearly (r2 = 0.9998) with the oligonucleotide target concentration over three orders of magnitude, between 12 pmol/L and 12 nmol/L. The estimated detection limit was 1.2 pmol/L (i.e., 7.2 x 10(6) target molecules in 10 microL of sample solution). The analytical usefulness of the impedimetric genosensor was finally demonstrated analysing amplified samples obtained from the pBI121 plasmid and soy and maize powders containing 1 and 5% of genetically modified product. Sensing of such unmodified amplicons was achieved via sandwich hybridisation with a biotinylated signaling probe. The electrochemical enzyme-amplified assay allowed unambiguous identification of all genetically modified samples, while no significant non-specific signal was detected in the case of all negative controls.
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Affiliation(s)
- Fausto Lucarelli
- Department of Chemistry, University of Florence, 50019 Sesto Fiorentino, Florence, Italy
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Takahashi M, Okada J, Ito K, Hashimoto M, Hashimoto K, Yoshida Y, Furuichi Y, Ohta Y, Mishiro S, Gemma N. Construction of an electrochemical DNA chip for simultaneous genotyping of single nucleotide polymorphisms. Analyst 2005; 130:687-93. [PMID: 15852138 DOI: 10.1039/b414030n] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An electrochemical DNA chip was constructed for simultaneous genotyping of single nucleotide polymorphisms (SNPs) using genomic DNA extracted from blood samples. This chip consisted of electrodes located on a single piece of substrate and allele-specific oligonucleotide probes on the electrodes. As a first application, the 4 SNPs (MxA[-88], MxA[-123], MBL[X/Y], and MBL[A/B]), which have association with the efficacy of interferon therapy for HCV patient, were genotyped on the new DNA chip. Following hybridization of PCR products containing the 4 types of fragments, washing, bisbenzimide H33258 (Hoechst 33258) reaction and electrochemical analyses, 59 blood samples were genotyped by the chip method simultaneously. All procedures were completed within 2 h and the results were 100% concordant with those by the direct sequence method. The electrochemical DNA chip is expected to be a practical tool for SNPs genotyping.
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Affiliation(s)
- Masayoshi Takahashi
- Toshiba Research & Development Center, 1, Komukai Toshiba-cho, Saiwai-ku, Kawasaki, Kanagawa Pref. 212-8582, Japan.
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Johnson PA, Levicky R. X-ray photoelectron spectroscopy and differential capacitance study of thiol-functional polysiloxane films on gold supports. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2004; 20:9621-9627. [PMID: 15491195 DOI: 10.1021/la048458s] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Polymeric molecules containing multiple thiol groups (polythiols) provide tenacious attachment to metal surfaces such as gold. Polythiol films are also well suited for subsequent derivatization with biomacromolecules through remnant free thiol groups of the film. In this study, 1-3 nm thick layers of a commercial polythiol, poly((mercaptopropyl)methylsiloxane) (PMPMS), are investigated with X-ray photoelectron spectroscopy (XPS) and electrochemical impedance spectroscopy. XPS is used to reveal the surface coverage of thiolate-Au bonds between the polythiol and the metal support, which is found to be approximately 30% lower than that in alkanethiol self-assembled monolayers. The surface density of thiolate-Au bonds did not depend on film thickness provided sufficient PMPMS material was present. Differential capacitance measurements show that the effective dielectric barrier presented by PMPMS films under aqueous environments corresponds closely to their physical thickness, with even approximately 1 nm films remaining impermeable to electrolyte species. Modification of the films with an oligoethylene glycol compound was also examined, in anticipation of future applications in label-free, impedance-based biomolecular diagnostics.
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Affiliation(s)
- Patrick A Johnson
- Department of Chemical Engineering, Columbia University, New York, New York 10027, USA
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Navrátilová I, Skládal P. The immunosensors for measurement of 2,4-dichlorophenoxyacetic acid based on electrochemical impedance spectroscopy. Bioelectrochemistry 2004; 62:11-8. [PMID: 14990321 DOI: 10.1016/j.bioelechem.2003.10.004] [Citation(s) in RCA: 79] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2003] [Revised: 07/18/2003] [Accepted: 09/23/2003] [Indexed: 11/15/2022]
Abstract
Electrochemical impedance spectroscopy (EIS) was evaluated for the direct determination of herbicide 2,4-dichlorophenoxyacetic acid (2,4-D). Specific antibody against 2,4-D was immobilised onto different gold electrodes. Several methods of antibody immobilisation by covalent linkage to modified surface were studied. Self-assembled monolayers formed using thiocompounds as cystamine, 4-aminothiophenol (ATPh), 3,3'-dithiopropionic acid di-(N-succinimidyl ester) (DTSP) and 11-mercaptoundecanoic acid (MUA) were chosen for the sensing surface activation. Three different sensor types were tested: screen-printed disc and finger-like structures and interdigitated array (IDA) electrodes produced by lithography. The measurements were carried out in a stationary arrangement, and the reaction between hapten and the immobilised antibody was observed online. Changes of impedance parameters were evaluated, and the best immobilisation technique (using 4-aminothiophenol) was chosen for further measurements. Impedance changes due to immunocomplex formation were evaluated, and the possibility of direct monitoring of 2,4-D binding to the antibody was demonstrated at a fixed frequency. For the strip sensor, the calibration curves were constructed in concentration range from 45 nmol l(-1) to 0.45 mmol l(-1) of 2,4-D.
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Affiliation(s)
- Iva Navrátilová
- Department of Biochemistry, Masaryk University, Kotlárská 2, 61137 Brno, Czech Republic.
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Modification of Escherichia coli single-stranded DNA binding protein with gold nanoparticles for electrochemical detection of DNA hybridization. Anal Chim Acta 2004. [DOI: 10.1016/j.aca.2003.12.067] [Citation(s) in RCA: 78] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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Takahashi M, Okada J, Ito K, Hashimoto M, Hashimoto K, Yoshida Y, Furuichi Y, Ohta Y, Mishiro S, Gemma N. Electrochemical DNA Array for Simultaneous Genotyping of Single-Nucleotide Polymorphisms Associated with the Therapeutic Effect of Interferon. Clin Chem 2004; 50:658-61. [PMID: 14981038 DOI: 10.1373/clinchem.2003.023283] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Masayoshi Takahashi
- Toshiba Research & Development Center, 1, Komukai Toshiba-cho, Saiwai-ku, Kawasaki, Kanagawa 212-8582, Japan.
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