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For: Möller MN, Lancaster JR, Denicola A. Chapter 2 The Interaction of Reactive Oxygen and Nitrogen Species with Membranes. Free Radical Effects on Membranes 2008. [DOI: 10.1016/s1063-5823(08)00202-0] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Number Cited by Other Article(s)
1
Shinn EJ, Tajkhorshid E. Generating Concentration Gradients across Membranes for Molecular Dynamics Simulations of Periodic Systems. Int J Mol Sci 2024;25:3616. [PMID: 38612428 PMCID: PMC11012027 DOI: 10.3390/ijms25073616] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2024] [Revised: 03/15/2024] [Accepted: 03/20/2024] [Indexed: 04/14/2024]  Open
2
Masuda D, Nakanishi I, Ohkubo K, Ito H, Matsumoto KI, Ichikawa H, Chatatikun M, Klangbud WK, Kotepui M, Imai M, Kawakami F, Kubo M, Matsui H, Tangpong J, Ichikawa T, Ozawa T, Yen HC, St Clair DK, Indo HP, Majima HJ. Mitochondria Play Essential Roles in Intracellular Protection against Oxidative Stress-Which Molecules among the ROS Generated in the Mitochondria Can Escape the Mitochondria and Contribute to Signal Activation in Cytosol? Biomolecules 2024;14:128. [PMID: 38275757 PMCID: PMC10813015 DOI: 10.3390/biom14010128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Revised: 12/28/2023] [Accepted: 12/29/2023] [Indexed: 01/27/2024]  Open
3
Ghadirian F, Abbasi H, Bavi O, Naeimabadi A. How living cells are affected during the cold atmospheric pressure plasma treatment. Free Radic Biol Med 2023;205:141-150. [PMID: 37295538 DOI: 10.1016/j.freeradbiomed.2023.06.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Revised: 06/03/2023] [Accepted: 06/06/2023] [Indexed: 06/12/2023]
4
Abduvokhidov D, Yusupov M, Shahzad A, Attri P, Shiratani M, Oliveira MC, Razzokov J. Unraveling the Transport Properties of RONS across Nitro-Oxidized Membranes. Biomolecules 2023;13:1043. [PMID: 37509079 PMCID: PMC10377474 DOI: 10.3390/biom13071043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Revised: 06/13/2023] [Accepted: 06/25/2023] [Indexed: 07/30/2023]  Open
5
Cikes D, Elsayad K, Sezgin E, Koitai E, Torma F, Orthofer M, Yarwood R, Heinz LX, Sedlyarov V, Miranda ND, Taylor A, Grapentine S, Al-Murshedi F, Abot A, Weidinger A, Kutchukian C, Sanchez C, Cronin SJF, Novatchkova M, Kavirayani A, Schuetz T, Haubner B, Haas L, Hagelkruys A, Jackowski S, Kozlov AV, Jacquemond V, Knauf C, Superti-Furga G, Rullman E, Gustafsson T, McDermot J, Lowe M, Radak Z, Chamberlain JS, Bakovic M, Banka S, Penninger JM. PCYT2-regulated lipid biosynthesis is critical to muscle health and ageing. Nat Metab 2023;5:495-515. [PMID: 36941451 DOI: 10.1038/s42255-023-00766-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Accepted: 02/10/2023] [Indexed: 03/23/2023]
6
Liu Y, Quan X, Li J, Huo J, Li X, Zhao Z, Li S, Wan J, Li J, Liu S, Wang T, Zhang X, Guan B, Wen R, Zhao Z, Wang C, Bai C. Liposomes embedded with PEGylated iron oxide nanoparticles enable ferroptosis and combination therapy in cancer. Natl Sci Rev 2022;10:nwac167. [PMID: 36684514 PMCID: PMC9843134 DOI: 10.1093/nsr/nwac167] [Citation(s) in RCA: 26] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Revised: 07/09/2022] [Accepted: 08/15/2022] [Indexed: 01/25/2023]  Open
7
Qi YT, Jiang H, Wu WT, Zhang FL, Tian SY, Fan WT, Liu YL, Amatore C, Huang WH. Homeostasis inside Single Activated Phagolysosomes: Quantitative and Selective Measurements of Submillisecond Dynamics of Reactive Oxygen and Nitrogen Species Production with a Nanoelectrochemical Sensor. J Am Chem Soc 2022;144:9723-9733. [PMID: 35617327 DOI: 10.1021/jacs.2c01857] [Citation(s) in RCA: 31] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
8
Laroussi M, Bekeschus S, Keidar M, Bogaerts A, Fridman A, Lu XP, Ostrikov KK, Hori M, Stapelmann K, Miller V, Reuter S, Laux C, Mesbah A, Walsh J, Jiang C, Thagard SM, Tanaka H, Liu DW, Yan D, Yusupov M. Low Temperature Plasma for Biology, Hygiene, and Medicine: Perspective and Roadmap. IEEE TRANSACTIONS ON RADIATION AND PLASMA MEDICAL SCIENCES 2022. [DOI: 10.1109/trpms.2021.3135118] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
9
Incoming new IUPAB councilor 2021: Ana Denicola. Biophys Rev 2021;13:827-830. [DOI: 10.1007/s12551-021-00901-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Accepted: 11/01/2021] [Indexed: 10/19/2022]  Open
10
Lefrançois P, Santolini J, Arbault S. Electroanalysis at a Single Giant Vesicle Generating Enzymatically a Reactive Oxygen Species. Anal Chem 2021;93:13143-13151. [PMID: 34546719 DOI: 10.1021/acs.analchem.1c01208] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
11
Davoudi S, Ghysels A. Sampling efficiency of the counting method for permeability calculations estimated with the inhomogeneous solubility-diffusion model. J Chem Phys 2021;154:054106. [PMID: 33557559 DOI: 10.1063/5.0033476] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
12
Riccardi E, Krämer A, van Erp TS, Ghysels A. Permeation Rates of Oxygen through a Lipid Bilayer Using Replica Exchange Transition Interface Sampling. J Phys Chem B 2020;125:193-201. [DOI: 10.1021/acs.jpcb.0c09947] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
13
Diffusion and Transport of Reactive Species Across Cell Membranes. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2019;1127:3-19. [PMID: 31140168 DOI: 10.1007/978-3-030-11488-6_1] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
14
Hu Y, Zhao T, Zou L, Wang X, Zhang Y. Molecular dynamics simulations of membrane properties affected by plasma ROS based on the GROMOS force field. Biophys Chem 2019;253:106214. [PMID: 31272076 DOI: 10.1016/j.bpc.2019.106214] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2019] [Revised: 06/25/2019] [Accepted: 06/25/2019] [Indexed: 12/22/2022]
15
Amhamed A, Atilhan M, Berdiyorov G. Permeabilities of CO2, H2S and CH4 through Choline-Based Ionic Liquids: Atomistic-Scale Simulations. Molecules 2019;24:molecules24102014. [PMID: 31137761 PMCID: PMC6572545 DOI: 10.3390/molecules24102014] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2019] [Revised: 04/30/2019] [Accepted: 05/14/2019] [Indexed: 11/16/2022]  Open
16
Kumar S, Yadav DK, Choi EH, Kim MH. Insight from Molecular dynamic simulation of reactive oxygen species in oxidized skin membrane. Sci Rep 2018;8:13271. [PMID: 30185881 PMCID: PMC6125594 DOI: 10.1038/s41598-018-31609-w] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Accepted: 08/10/2018] [Indexed: 11/08/2022]  Open
17
Ferrer-Sueta G, Campolo N, Trujillo M, Bartesaghi S, Carballal S, Romero N, Alvarez B, Radi R. Biochemistry of Peroxynitrite and Protein Tyrosine Nitration. Chem Rev 2018;118:1338-1408. [DOI: 10.1021/acs.chemrev.7b00568] [Citation(s) in RCA: 292] [Impact Index Per Article: 48.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
18
Carabet LA, Guertin M, Lagüe P, Lamoureux G. Mechanism of the Nitric Oxide Dioxygenase Reaction of Mycobacterium tuberculosis Hemoglobin N. J Phys Chem B 2017;121:8706-8718. [DOI: 10.1021/acs.jpcb.7b06494] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
19
Yusupov M, Wende K, Kupsch S, Neyts EC, Reuter S, Bogaerts A. Effect of head group and lipid tail oxidation in the cell membrane revealed through integrated simulations and experiments. Sci Rep 2017;7:5761. [PMID: 28720839 PMCID: PMC5515852 DOI: 10.1038/s41598-017-06412-8] [Citation(s) in RCA: 62] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2016] [Accepted: 06/14/2017] [Indexed: 12/22/2022]  Open
20
Ghysels A, Venable RM, Pastor RW, Hummer G. Position-Dependent Diffusion Tensors in Anisotropic Media from Simulation: Oxygen Transport in and through Membranes. J Chem Theory Comput 2017;13:2962-2976. [PMID: 28482659 DOI: 10.1021/acs.jctc.7b00039] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
21
Yusupov M, Van der Paal J, Neyts E, Bogaerts A. Synergistic effect of electric field and lipid oxidation on the permeability of cell membranes. Biochim Biophys Acta Gen Subj 2017;1861:839-847. [DOI: 10.1016/j.bbagen.2017.01.030] [Citation(s) in RCA: 99] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2016] [Revised: 12/25/2016] [Accepted: 01/26/2017] [Indexed: 11/29/2022]
22
Biological chemistry of hydrogen sulfide and persulfides. Arch Biochem Biophys 2017;617:9-25. [DOI: 10.1016/j.abb.2016.09.018] [Citation(s) in RCA: 116] [Impact Index Per Article: 16.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2016] [Revised: 09/28/2016] [Accepted: 09/29/2016] [Indexed: 02/08/2023]
23
Van der Paal J, Verheyen C, Neyts EC, Bogaerts A. Hampering Effect of Cholesterol on the Permeation of Reactive Oxygen Species through Phospholipids Bilayer: Possible Explanation for Plasma Cancer Selectivity. Sci Rep 2017;7:39526. [PMID: 28059085 PMCID: PMC5216346 DOI: 10.1038/srep39526] [Citation(s) in RCA: 56] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2016] [Accepted: 11/23/2016] [Indexed: 11/08/2022]  Open
24
Rhéault JF, Gagné È, Guertin M, Lamoureux G, Auger M, Lagüe P. Molecular Model of Hemoglobin N from Mycobacterium tuberculosis Bound to Lipid Bilayers: A Combined Spectroscopic and Computational Study. Biochemistry 2015;54:2073-84. [DOI: 10.1021/bi5010624] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
25
Cordeiro RM. Reactive oxygen species at phospholipid bilayers: distribution, mobility and permeation. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2013;1838:438-44. [PMID: 24095673 DOI: 10.1016/j.bbamem.2013.09.016] [Citation(s) in RCA: 129] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2013] [Revised: 09/12/2013] [Accepted: 09/23/2013] [Indexed: 10/26/2022]
26
Thom SR, Yang M, Bhopale VM, Milovanova TN, Bogush M, Buerk DG. Intramicroparticle nitrogen dioxide is a bubble nucleation site leading to decompression-induced neutrophil activation and vascular injury. J Appl Physiol (1985) 2012;114:550-8. [PMID: 23264541 DOI: 10.1152/japplphysiol.01386.2012] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
27
Janakiram NB, Rao CV. iNOS-selective inhibitors for cancer prevention: promise and progress. Future Med Chem 2012;4:2193-204. [PMID: 23190107 PMCID: PMC3588580 DOI: 10.4155/fmc.12.168] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
28
Mohammad MK, Almasri IM, Tawaha K, Issa A, Al-Nadaf A, Hudaib M, Alkhatib HS, Abu-Gharbieh E, Bustanji Y. Antioxidant, antihyperuricemic and xanthine oxidase inhibitory activities of Hyoscyamus reticulatus. PHARMACEUTICAL BIOLOGY 2010;48:1376-1383. [PMID: 20738177 DOI: 10.3109/13880209.2010.483521] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
29
Heller A. The need for monitoring the actual nitric oxide concentration in tumors. ACTA ACUST UNITED AC 2009;1:3-6. [PMID: 20234843 PMCID: PMC2837249 DOI: 10.1007/s12566-009-0003-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2009] [Accepted: 04/02/2009] [Indexed: 11/28/2022]
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