Using camera trap data to assess the impact of bushmeat hunting on forest mammals in Tanzania

Tree biomass, carbon stock characteristics and ground beetles (Coleoptera: Carabidae) diversity in the Uzungwa Scarp Forest Nature Reserve, Tanzania

Reducing carbon emission from Deforestation and forest Degradation (REDD+) has drawn attention and remain one of the main options for climate change mitigation. However, the extent to which conservation for carbon may enhance biodiversity conservation in both disturbed and relatively undisturbed (control) environment remain unclear in most forest types. The extent to which anthropogenic disturbances affect carbon stock and ground beetle diversity is also far from clear. This paper addressed these knowledge gaps using data based on ground beetles, carbon stock in live trees and tree species sampled in Uzungwa Scarp Nature Forest Reserve (USNFR). All trees with a diameter at breast height (DBH) ≥ 5 cm were measured for height and DBH in twelve clusters of 1 ha in size. In the same clusters, ground beetles were sampled using pitfall traps, active night search and active day search. The species diversity of ground beetles differed significantly between control sites and disturbed sites (p < 0.05). The mean total biomass and carbon stock in live trees were high in disturbed sites (323.72 t/ha) when compared to control sites (289.72 t/ha) but the difference was not statistically significant (U = 14, p > 0.05). Carbon in live trees and ground beetle diversity showed a weak positive correlation, while richness and abundance showed weak negative in control sites. Results show that REDD+ related activities in a tropical forest may enhance ground beetle diversity and carbon stock if ground beetles conservation is explicitly taken into account. Thus forest conservation planning that pursues both carbon storage and ground-dwelling invertebrate diversity is recommended.

Fire suppression and seed dispersal play critical roles in the establishment of tropical forest tree species in southeastern Africa

This study examined the mechanisms of facilitation and importance of seed dispersal during establishment of forest tree species in an Afrotropical woodland. Seedling survival of Syzygium guineense ssp. afromontanum was monitored for 2.5 years at four different microsites in savannah woodland in Malawi (southeastern Africa) under Ficus natalensis (a potential nurse plant), Brachystegia floribunda (a woodland tree), Uapaca kirkiana (a woodland tree), and at a treeless site. The number of naturally established forest tree seedlings in the woodland was also counted. Additionally, S. guineense ssp. afromontanum seed deposition was monitored at the four microsites. Insect damage (9% of the total cause of mortality) and trampling by ungulates (1%) had limited impact on seedling survival in this area. Fire (43%) was found to be the most important cause of seedling mortality and fire induced mortality was especially high under U. kirkiana (74%) and at treeless site (51%). The rate was comparatively low under F. natalensis (4%) and B. floribunda (23%), where fire is thought to be inhibited due to the lack of light-demanding C4 grasses. Consequently, seedling survival under F. natalensis and B. floribunda was higher compared with the other two microsites. The seedling survival rate was similar under F. natalensis (57%) and B. floribunda (59%). However, only a few S. guineense ssp. afromontanum seedlings naturally established under B. floribunda (25/285) whereas many seedlings established under F. natalensis (146/285). These findings indicate that the facilitative mechanism of fire suppression is not the only factor affecting establishment. The seed deposition investigation revealed that most of the seeds (85%) were deposited under F. natalensis. As such, these findings suggest that in addition to fire suppression, dispersal limitations also play a role in forest-savannah dynamics in this region, especially at the community level.

When parks work: Effect of anthropogenic disturbance on occupancy of tropical forest mammals

Protected areas (PAs) in the tropics are vulnerable to human encroachment, and, despite formal protection, they do not fully mitigate anthropogenic threats to habitats and biodiversity. However, attempts to quantify the effectiveness of PAs and to understand the status and changes of wildlife populations in relation to protection efficiency remain limited. Here, we used camera-trapping data collected over 8 consecutive years (2009-2016) to investigate the yearly occurrences of medium-to-large mammals within the Udzungwa Mountains National Park (Tanzania), an area of outstanding importance for biological endemism and conservation. Specifically, we evaluated the effects of habitat and proxies of human disturbance, namely illegal hunting with snares and firewood collection (a practice that was banned in 2011 in the park), on species' occurrence probabilities. Our results showed variability in species' responses to disturbance: The only species that showed a negative effect of the number of snares found on occurrence probability was the Harvey's duiker, a relatively widespread forest antelope. Similarly, we found a moderate positive effect of the firewood collection ban on only the suni, another common antelope, and a negative effect on a large opportunistic rodent, the giant-pouched rat. Importantly, we found evidence of temporal stability in occurrence probability for all species over the 8-year study period. Our findings suggest that well-managed PAs can sustain mammal populations in tropical forests. However, variability among species in their responses to anthropogenic disturbance necessitates consideration in the design of conservation action plans for multiple taxa.

Estimating the population size of the Sanje mangabey (Cercocebus sanjei) using acoustic distance sampling

The Sanje mangabey (Cercocebus sanjei) is endemic to the Udzungwa Mountains, Tanzania, and is classified as Endangered due to its putatively declining population size, habitat degradation and fragmentation. Previous population size estimates have ranged from 1,350 to 3,500 individuals, with the last direct survey being conducted 15 years before the present study. Previous estimates are now thought to have underestimated the population due to a limited knowledge of group and habitat size, nonsystematic approaches and the use of visual methods that are not suitable for surveying the Sanje mangabey with its semi-terrestrial and elusive behaviors. We used an acoustic survey method with observers recording the distinctive "whoop-gobble" vocalization produced by mangabeys and point transect distance sampling to model a detection function and estimate abundance. Twenty-eight surveys were conducted throughout the two forests where Sanje mangabeys are found: Mwanihana forest in the Udzungwa Mountains National Park (n = 13), and the Uzungwa Scarp Nature Reserve (n = 15). Group density was found to be significantly lower in the relatively unprotected Uzungwa Scarp forest (0.15 groups/km² ; 95% CI: 0.08-0.27) compared to the well-protected Mwanihana forest (0.29 groups/km² ; 95% CI: 0.19-0.43; p = .03). We estimate that there are 1,712 (95% CI: 1,141-2,567) individuals in Mwanihana and 1,455 (95% CI: 783-2,702) in the Uzungwa Scarp, resulting in a total population size of 3,167 (95% CI: 2,181-4,596) individuals. The difference in group density between sites is likely a result of the differing protection status and levels of enforcement between the forests, suggesting that protection of the Uzungwa Scarp should be increased to encourage recovery of the population, and reduce the threat of degradation and hunting. Our results contribute to the reassessment of the species' IUCN Red List status and informing management and conservation action planning.

Primary productivity and habitat protection predict elevational species richness and community biomass of large mammals on Mt. Kilimanjaro

Despite their diversity and their large functional and cultural importance, the patterns and predictors of large mammal diversity along elevational gradients on tropical mountains remain poorly understood. Today, large mammals are threatened by human disturbances such as habitat destruction and hunting and may increasingly depend on the conservation of protected areas. Here, we use field data on the diversity of large mammals along a 3.6 km elevational gradient on Mt. Kilimanjaro to evaluate the importance of climate, net primary productivity and human impact for the distribution, species richness and community biomass of wild mammals. Mammal species richness was explored with camera traps on 66 study plots along an elevational gradient from 870 to 4,550 m a.s.l.. We applied path analysis and variance partitioning analysis to unravel the direct and indirect effects of temperature, precipitation, primary productivity, land use, land area, the protection of habitats and the occurrence of domestic mammals on the diversity of wild mammals. Both species richness and community biomass of wild mammals showed a unimodal distribution with elevation, peaking in the montane zone of Mt. Kilimanjaro. However, the peak shifted significantly to lower elevations when only protected habitats were considered. Wild mammal diversity increased with net primary productivity, protection of habitats and temperature. Our study underscores the importance of energy resources for the establishment of diversity gradients in large mammals. While temperature has been revealed as a direct predictor of diversity in most ectothermic taxa, in endothermic organisms temperature has stronger indirect effects, via a modulation of net primary productivity. Moreover, our study reveals how patterns of diversity on tropical mountains are influenced by human impact, pointing to the pivotal role of protected areas for the long-term conservation of mountain biodiversity.

A landscape-scale assessment of tropical mammals reveals the effects of habitat and anthropogenic disturbance on community occupancy

With biodiversity facing unparalleled threats from anthropogenic disturbance, knowledge on the occurrences of species and communities provides for an effective and fast approach to assess their status and vulnerability. Disturbance is most prominent at the landscape-level, for example through habitat loss from large-scale resource extraction or agriculture. However, addressing species responses to habitat changes at the landscape-scale can be difficult and cost-ineffective, hence studies are mostly conducted at single areas or habitat patches. Moreover, there is a relative lack of studies on communities, as opposed to focal species, despite the former may carry more comprehensive information. Here, we used a multi-region, multi-species hierarchical occupancy model to study a meta-community of mammals detected by camera traps across five distinct areas within a heterogeneous landscape in Tanzania, and aimed to assess responses to human disturbance and environmental variables. Estimated species richness did not vary significantly across different areas, even though these held broadly different habitats. Moreover, we found remarkable consistency in the positive effect of distance to human settlements, a proxy for anthropogenic disturbance, on community occupancy. The positive effect of body size and the positive effect of proximity to rivers on community occupancy were also shared by communities. Results yield conservation relevance because: (1) the among-communities consistency in responses to anthropogenic disturbance, despite the heterogeneity in sampled habitats, indicates that conservation plans designed at the landscape-scale may represent a comprehensive and cost-efficient approach; (2) the consistency in responses to environmental factors suggests that multi-species models are a powerful method to study ecological patterns at the landscape-level.

Annual and spatial variation in composition and activity of terrestrial mammals on two replicate plots in lowland forest of eastern Ecuador

Terrestrial mammals are important components of lowland forests in Amazonia (as seed dispersal agents, herbivores, predators) but there are relatively few detailed studies from areas that have not been affected by human activities (e.g., hunting, logging). Yet, such information is needed to evaluate effects of humans elsewhere. We used camera traps to sample medium to large-sized terrestrial mammals at a site in lowland forests of eastern Ecuador, one of the most biologically rich areas in the world. We deployed cameras on two study plots in terra firme forest at Tiputini Biodiversity Station. Sixteen cameras were arranged 200 m apart in a 4 × 4 grid on each plot. Cameras were operated for  60 days in January–March, 2014–2017, for a total of 3,707 and 3,482 trap-days on the two plots (Harpia, Puma). A total of 28 species were recorded; 26 on Harpia and 25 on Puma. Number of species recorded each year was slightly greater on Harpia whereas overall capture rates (images/100 trap-days) were higher on Puma. Although most species were recorded on each plot, differences in capture rates meant that yearly samples on a given plot were more similar to each other than to samples on the other plot. Images of most species showed a clumped distribution pattern on each plot; Panthera onca was the only species that did not show a clumped distribution on either plot. Images at a given camera location showed no evidence of autocorrelation with numbers of images at nearby camera locations, suggesting that species were responding to small-scale differences in habitat conditions. A redundancy analysis showed that environmental features within 50 or 100 m of camera locations (e.g., elevation, variation in elevation, slope, distance to streams) accounted for significant amounts of variation in distribution patterns of species. Composition and relative importance based on capture rates were very similar to results from cameras located along trails at the same site; similarities decreased at increasing spatial scales based on comparisons with results from other sites in Ecuador and Peru.