Stages in the early and larval development of the African catfish Clarias gariepinus (Teleostei, Clariidae)

Construction of a Full-Length transcriptome resource for the African sharptooth catfish (Clarias gariepinus), a prototypical air-breathing Fish, based on isoform sequencing (Iso-Seq)

The African sharptooth catfish (Clarias gariepinus) assumes significance in aquaculture, given its role as a farmed freshwater species with modified gill structures functioning as an air-breathing organ (ABO). To provide a scientific basis for further elucidating the air-breathing formation mechanism and deeply utilizing the genetic resources of Clarias gariepinus, we utilized the PacBio sequencing platform to acquire a comprehensive full-length transcriptome from five juvenile developmental stages and various adult tissues, including the ABO, gills, liver, skin, and muscle. We generated 25,766,688 high-quality reads, with an average length of 2,006 bp and an N50 of 2,241 bp. Following rigorous quality control, 34,890 (97.7 %) of the high-quality isoforms were mapped to the reference genome for gene and transcript annotation, yielding 387 novel isoforms and 14,614 new isoforms. Additionally, we identified 28,582 open reading frames, 48 SNPs, 5,464 variable splices, and 6,141 variable polyadenylation sites, along with 475 long non-coding RNAs. Many DEGs were involved with low oxygen GO terms and KEGG pathways, such as response to stimulus, biological regulation and catalytic activities. Furthermore, it was found that transcription factors such as zf-C2H2, Homeobox, bHLH, and MYB could underpin the African sharptooth catfish's developmental plasticity and its capacity to adapt its morphology and function to its environment. Through the comprehensive analysis of its genomic characteristics, it was found that the African sharptooth catfish has developed a series of unique respiratory adaptive mechanisms during the evolutionary process, These results not only advances the understanding of genetic adaptations to hypoxia in Clarias fish but also provides a valuable framework for future studies aimed at improving aquaculture practices,besides provide important references and inspirations for the evolution of aquatic organisms.

Embryonic and Larval Development of Stinging Catfish, Heteropneustes fossilis, in Relation to Climatic and Water Quality Parameters

In terms of hatchery-based seed production, one of the most important aquaculture species in Bangladesh is the stinging catfish (Heteropneustes fossilis). Scientific and evidence-based embryonic and larval development research on this fish species in the context of climate change is limited. This experimental study was conducted via induced breeding of stinging catfish using a conventional hatchery system, rearing the larvae in hapas placed in ponds. A series of microscopic observations using a trinocular digital microscope and an analysis of the relationship between larval growth and climate-driven water quality parameters such as temperature, pH, dissolved oxygen, total dissolved solids, alkalinity, and ammonia were performed. During embryonic development, the first cleavage was observed between 30 and 35 min of post-fertilization. Embryonic development (ranging from the 2-cell to the pre-hatching stage) took 21:00 h. Hatching occurred at 22:30 to 23:00 h after fertilization, with an average larvae length of 2.78 ± 0.04 mm. In the post-hatching stage, four pairs of tiny barbels appeared at 36:00 h, and the larvae started feeding exogenously after 72:00 h. These larvae fully absorbed their yolk sacs on the 6th day and attained an average length of 6.44 ± 0.06 mm. Aerial respiration of the larvae was investigated through naked-eye observation on the 10th day of hatching. The average length of the larvae was 32.00 ± 2.0 mm at the end of the 30-day post-hatching observation period. Bivariate correlation analysis showed significant correlations between key climatic variables and water quality parameters under hapa-based larval-rearing conditions. According to canonical correlation analysis, the first canonical function revealed the highest significant correlation between the two sets of variables (r1 = 0.791). The response variable weight of larvae (6.607) was linked to two explanatory variables: pH (0.321) and dissolved oxygen (0.265). For the second canonical correlation function, a positive correlation (0.431) was observed between the two sets of variables. Larval weight (-18.304) was observed to be linked to climatic variables, including air temperature (-0.316) and surface pressure (0.338). Results of this study reveal the subtle correlation between larval growth and water quality driven by climatic variables.

Breeding performance and embryogenic development of three strains of Heterobranchus longifilis in Nigeria

The study sought to investigate the chronology of events and timing of embryogenesis, as well as breeding performances of three strains of Heterobranchus longifilis from Nigeria. Fish samples were collected from Benue River in Makurdi, Niger River in Onitsha, and Rima River in Sokoto for this study. Induced spawning of the strains was carried out so that egg development could be tracked from fertilization to hatching using a simple microscope. The microphotographs obtained showed that the embryogenesis of the strains followed a similar pattern to those of other members of the family Clariidae, however with changes occurring in the specific timing of the sequences of events (i.e. interstrain and interspecies differences). When the different strains were compared, the study noted similarities (P > 0.05) in the overall breeding performance (except for fertilization rate), survival at different stages of development, timing of embryogenesis, and larvae characteristics. The outcomes of this study, therefore, provide baseline information on what genetic improvement of the species through strain crossing can be attempted in future studies.

Influence of temperature on larval ontogenesis of Geophagus brasiliensis (Quoy & Gaimard, 1824) (Pisces: Cichlidae)

Studies on the larval development of fish are essential for conservation and improvements in cultivation techniques. Geophagus brasiliensis popularly known as Cará has potential as a fish of interest in ornamental aquaculture. Wild adults of G. brasiliensis were kept in an aquarium for spontaneous reproduction. Newly hatched larvae were transferred to 5-litre aquaria at 22, 26 and 30°C until total yolk sac resorption. Histological slides were used for biometric analysis and monitoring of larval ontogenesis at different temperatures. Histologically, from the first to the fourth days it was possible to identify myomeres, optic vesicle, yolk syncytial layer, brain, heart and differentiation of the eye layers. From the fourth to the seventh days, it was possible to identify mandibular and gill cartilages, swim bladder, liver, prismatic epithelium with striated border in intestine and renal epithelium. All biometric measurements increased over the days, except height and length of the yolk sac, which gradually decreased until the complete resorption of the yolk sac that occurred on the fifth day at a temperature of 30°C, the sixth day at 26°C and the seventh day at 22°C. Morphological events at 30°C such as the reabsorption of the yolk sac, the appearance of cartilage in the branchial arches and differentiation of the layers of the eyes occurred faster compared with the other temperatures tested. Opening of the mouth and digestive tract occurred at a similar time on the fourth day in all temperatures.

Study on embryonic and larval developmental stages of Sucker head Garra gotyla (Gray 1830; Teleostei; Cyprinidae)

Garra gotyla is an indigenous coldwater fish of the cyprinid family and has wide geographical distribution in India as well as in other countries of Asia and Africa. Induced breeding in G. gotyla was carried out successfully for the first time and an attempt has been made to document developmental stages chronologically from the first minute of fertilization, through all stages of embryonic development until the fifth day post hatching. This experiment was carried out at 22-24°C water temperature at the Directorate of Coldwater Fisheries Research, Bhimtal, India. During the breeding trial, the fertilization rate was observed as 70-75% and hatching rate was 85-90%. The mature fertilized ova were measured as 0.8-1.0 mm in diameter and the perivitelline membrane became thick soon after fertilization and formation of the germ pole. The periods taken for complete developmental stages were recorded; cleavage stage 111 min (min post fertilization (pf)), blastulation stage 580 min (pf), neurulation and segmentation 1250 min (pf) and hatching was completed after 1420 min. The sac fry was measured as 3 mm in length and took almost 3 days for complete absorption of the yolk content. The major structural and differential changes observed are in head, tail, fins, alimentary canal, rudiments of each organ and appearance of melanophore pigmentation in the whole body. The 5-day-old larvae were measured as 6 mm in length with almost every organ fully differentiated. The present study will be utilized for large-scale production of fingerlings for stock enhancement in rivers, lakes and possibilities of genetic improvement and manipulation at the embryonic stage.

Optimization of artificial insemination outcomes of African catfish (Clarias gariepinus) with differing hatchery conditions

The African catfish is one of the most promising warm-freshwater species for aquaculture development in the upcoming years, although there are two primary limitations in its production: less-than-desirable survival rates and low larvae quality. In this study, a novel method of egg fertilization for this species was evaluated which has already been successfully utilized in the production of other finfish. The results indicate that dividing the semen designated for fertilization of eggs into smaller aliquots and adding it to the eggs at 30 s intervals (i.e., 0, 30 and 60 s), after activation of the eggs with water, increased the hatching rate percentage (97.1%) compared to control groups (87.9%) in which the entire portion of semen was added to eggs at the time of water addition for egg activation. Results with repeated evaluations in the field confirmed that eggs with greater biological quality were fertilized at a similar rate using the modified and control methods for fertilization, although when the eggs were of a lesser biological quality, the fertilization rate was greater using the modified methods than the control methods.

Fertilization, hatching, and embryogenesis of diploid and triploid eggs of Anabas testudineus (Bloch, 1792)

This study investigated the breeding parameters and embryogenic development of diploid and heat shock-induced triploid eggs of Anabas testudineus (Bloch, 1792). To this effect, broodstocks of A. testudineus were induced to spawn using the Ovaprim® hormone. After fertilization, the eggs were divided into two groups and one portion heat shocked at 41°C (for 3 min), at approximately 4 min after fertilization. Results of fertilization, hatchability, as well as the sequence and timing of embryogenic development were collated from three breeding trials. Fertilization percentages were similar in both treatments (≈90%) while hatchability was higher in the diploid eggs (79.56%) than the triploid induced eggs (50.04%). Both treatments had the same sequence of embryogenetic stages; however, the timing of development was significantly delayed in the triploids (i.e. beyond the 2-cell stages) as compared with the observations in the control group (diploid eggs). Consequently, hatching time was 5 h faster in the diploid eggs [i.e. 18 hours post fertilization (hpf)] compared with the triploid induced eggs (23 hpf). The most critical stage of embryonic development in which mass mortality occurred in the different treatments was the somite stage. The status of triploid hatchlings was affirmed using erythrocyte morphology in 2-month-old fingerlings.

Comparison of proximate composition and sensory attributes of Clariid catfish species of Clarias gariepinus, Heterobranchus bidorsalis, and their hybrids

Clariid catfish are favorite food fish especially in African and Asian continents. Recently there has been preference for particular species or hybrids of these species based on quality assurance and value addition. Consequently, this study aimed to evaluate the possible effect of different catfish species and their hybrids on proximate composition and sensory attributes. Catfish species, Clarias gariepinus (CC), Heterobranchus bidorsalis (HH), with their hybrid (CH), and reciprocal hybrid (HC) were evaluated for sensory variables – cognitive (sweet, salty, sour, bitter, and recent characteristic taste ‘umami’) and qualitative (texture, aroma, flavor, and color) tests; and nutritional variables – proximate composition (moisture, protein, ether/fat, and ash). A 5‐point hedonic scale from ‘neutral/neither like nor dislike’ to ‘excellent/like extremely’ was employed in sensory testing. The results showed similar (P > 0.05) high moisture contents (>70%) in all species and high but different (P < 0.05) ash contents (11–14%) that suggested good sources of mineral elements. The parent species CC and HH had higher ash contents than CH or HC. The crude protein contents were high and similar (P > 0.05) across species (>57%). Fat or ether extract was different (P < 0.05) and tended to be higher for species with Clarias as the female parent than Heterobranchus. Sensory analysis showed the parent species, CC and HH, more favorably rated for sweet and umami than the hybrids, CH and HC. However, CH was less sour and bitter than all other species and HC better than CH for salty but similar to CC and HH. All fish species were very well liked for texture, but the parent species were superior in flavor than the hybrids. All species were very well liked for aroma, color, and overall acceptability except HC, which was moderately liked. HC rated inferior to the other species overall in sensory attributes. All the fish species did not rate ‘excellent/like extremely’ for any attribute. It can be concluded that the parent catfish species possess better sensory qualities than hybrids, but all species need exogenous enhancement to their natural sensory components.

Effect of temperature during embryonic development and first feeding of Trichogaster leeri larvae

Temperature is an environmental factor that influences the development of fish, and when changed abruptly can lead to high mortality. Some species of fish are influenced by this factor, exhibiting a longer time for embryonic development and time to first feeding. This study aims to evaluate the effect of water temperature on embryonic and larval development up to first feeding, to describe the time in hours post fertilization (hpf) of the emergence of different structures and to determine the best hatching rate and survival of animals under different treatments. Five different egg incubation temperatures were used (24, 26, 28, 30 or 32°C, respectively). The eggs were observed at regular intervals of 30 min up to 24 h, every 2 h until 48 h and every 4 h until the display of first feeding in all treatments. Embryonic development was longer for eggs incubated at 24°C and the best results for hatching rate and survival of spawning efficiency were at 28°C. We recommend that incubation of Trichogaster leeri eggs is carried out at 28°C up to the first feeding of larvae.

Embryonic and larval developmental stages of African giant catfish Heterobranchus bidorsalis (Geoffroy Saint Hilaire, 1809) (Teleostei, Clariidae)

The dearth of African giant catfish Heterobranchus bidorsalis seeds poses great threat to its aquaculture and biodiversity, hence detailed knowledge and understanding of its embryology is indispensable for its artificial propagation and conservation programmes. Photomicrographs of extruded oocyte through all developmental cell stages of live embryo to larval stage are documented with the aid of a light microscope. The optical transparency of the developing embryo enabled us to describe its deep structures, distinctive features and characterize the stages pictorially. Extruded oocyte had a mean diameter of 1 ± 0.1 mm, ~20% increase when hydrated, and bounded by double thin perivitelline membranes. The first mitotic cleavage occurred at 69 min post-fertilization (pf) resulting in 2, 4 (2 × 2 array of cells), 8 (2 × 4), 16 (4 × 4), 32 (4 × 8), 64 (2 × 4 × 8) blastomeres, then developed to morula, blastula and gastrula stages. Blastula was featured by formation of enveloping layer and yolk syncytial layer. Onset of epiboly at 3 h 57 min depicted the commencement of gastrula while closure of blastopore at 11 h 8 min marked its completion. Neurulation period was distinct from segmentation where organogenesis was fully active. Embryo sudden muscular contraction was noticed at ~17 h pf, increased prior to hatching with caudal locomotion firstly at 42 s interval. Heartbeat of embryo commenced at ~1 h before its unique eclosion at average of 72 beats/min while first larva emerged at 21 h at a controlled temperature of 28.5 ± 0.5°C. Mean total length (TL) of larvae and their pouch thickness were 5 ± 1 mm and 0.05 ± 0.02 mm respectively. 1 –day old larvae revealed 8 distinctive neuromeres and by day 3, epicanthus folds of the eyes were fully uncovered; and thereafter commenced exogenous feeding. At day 4, larvae recorded mean TL of 9 ± 1 mm and 15 caudal fin rays. The fin bifurcation to dorsal and adipose fins was observed at third and half weeks post-hatchability with the dorsal fin length to adipose fin was 1.7:1. This study, for the first time, presents significant morpho-sequential developmental stages of H. bidorsalis and registers its unique form of eclosion.