Near-infrared detection of flow injection analysis by acoustooptic tunable filter-based spectrophotometry

Motionless and fast measurement technique for obtaining the spectral diffraction efficiencies of a grating

The measurement of the spectral diffraction efficiencies of a diffraction grating is essential for improving the manufacturing technique and for assessing the grating's function in practical applications. The drawback of the currently popular measurement technique is its slow speed due to the hundreds of repetitions of two kinds of time-consuming mechanical movements during the measuring process (i.e., the rotation of the mechanical arm to capture the light beam and the mechanical variation of the output wavelength of the grating monochromator). This limitation greatly restricts the usage of this technique in dynamic measurement. In this manuscript, we present a motionless and fast measurement technique for obtaining the spectral diffraction efficiencies of a plane grating, effectively eliminating the aforementioned two kinds of mechanical movements. Herein, the proposed solution for removing the first kind of mechanical movement is tested, and the experimental result shows that the proposed method can be successfully used to measure the plane transmission grating's spectral diffraction efficiencies in the wavelength range of 550-750 nm. The method for eliminating the second kind of mechanical movement is not verified in this manuscript; however, we think that it is very straightforward and commercially available. We estimate that the spectral measurement can be achieved on a millisecond time scale by combining the two solutions. Our motionless and fast measuring technique will find broad applications in dynamic measurement environments and mass industrial testing.

Discrimination of CRISPR/Cas9-induced mutants of rice seeds using near-infrared hyperspectral imaging

Identifying individuals with target mutant phenotypes is a significant procedure in mutant exploitation for implementing genome editing technology in a crop breeding programme. In the present study, a rapid and non-invasive method was proposed to identify CRISPR/Cas9-induced rice mutants from their acceptor lines (huaidao-1 and nanjing46) using hyperspectral imaging in the near-infrared (NIR) range (874.41–1733.91 nm) combined with chemometric analysis. The hyperspectral imaging data were analysed using principal component analysis (PCA) for exploratory purposes, and a support vector machine (SVM) and an extreme learning machine (ELM) were applied to build discrimination models for classification. Meanwhile, PCA loadings and a successive projections algorithm (SPA) were used for extracting optimal spectral wavelengths. The SVM-SPA model achieved best performance, with classification accuracies of 93% and 92.75% being observed for calibration and prediction sets for huaidao-1 and 91.25% and 89.50% for nanjing46, respectively. Furthermore, the classification of mutant seeds was visualized on prediction maps by predicting the features of each pixel on individual hyperspectral images based on the SPA-SVM model. The above results indicated that NIR hyperspectral imaging together with chemometric data analysis could be a reliable tool for identifying CRISPR/Cas9-induced rice mutants, which would help to accelerate selection and crop breeding processes.

Chitosan-cellulose composite materials: preparation, characterization and application for removal of microcystin

We developed a simple and one-step method to prepare biocompatible composites from cellulose (CEL) and chitosan (CS). [BMIm(+)Cl(-)], an ionic liquid (IL), was used as a green solvent to dissolve and prepare the [CEL+CS] composites. Since majority (>88%) of IL used was recovered for reuse by distilling the aqueous washings of [CEL+CS], the method is recyclable. XRD, FTIR, NIR, (13)C CP-MAS-NMR and SEM were used to monitor the dissolution and to characterize the composites. The composite was found to have combined advantages of their components: superior mechanical strength (from CEL) and excellent adsorption capability for microcystin-LR, a deadly toxin produced by cyanobacteria (from CS). Specifically, the mechanical strength of the composites increased with CEL loading; e.g., up to 5× increase in tensile strength was achieved by adding 80% of CEL into CS. Kinetic results of adsorption confirm that unique properties of CS remain intact in the composite, i.e., it is not only a very good adsorbent for microcystin but also is better than all other available adsorbents. For example, it can adsorb 4× times more microcystin than the best reported adsorbent. Importantly, the microcystin adsorbed can be quantitatively desorbed to enable the composite to be reused with similar adsorption efficiency.

Supramolecular composite materials from cellulose, chitosan, and cyclodextrin: facile preparation and their selective inclusion complex formation with endocrine disruptors

We have successfully developed a simple one-step method of preparing high-performance supramolecular polysaccharide composites from cellulose (CEL), chitosan (CS), and (2,3,6-tri-O-acetyl)-α-, β-, and γ-cyclodextrin (α-, β-, and γ-TCD). In this method, [BMIm(+)Cl(-)], an ionic liquid (IL), was used as a solvent to dissolve and prepare the composites. Because a majority (>88%) of the IL used was recovered for reuse, the method is recyclable. XRD, FT-IR, NIR, and SEM were used to monitor the dissolution process and to confirm that the polysaccharides were regenerated without any chemical modifications. It was found that unique properties of each component including superior mechanical properties (from CEL), excellent adsorption for pollutants and toxins (from CS), and size/structure selectivity through inclusion complex formation (from TCDs) remain intact in the composites. Specifically, the results from kinetics and adsorption isotherms show that whereas CS-based composites can effectively adsorb the endocrine disruptors (polychlrophenols, bisphenol A), their adsorption is independent of the size and structure of the analytes. Conversely, the adsorption by γ-TCD-based composites exhibits a strong dependence on the size and structure of the analytes. For example, whereas all three TCD-based composites (i.e., α-, β-, and γ-TCD) can effectively adsorb 2-, 3-, and 4-chlorophenol, only the γ-TCD-based composite can adsorb analytes with bulky groups including 3,4-dichloro- and 2,4,5-trichlorophenol. Furthermore, the equilibrium sorption capacities for the analytes with bulky groups by the γ-TCD-based composite are much higher than those by CS-based composites. Together, these results indicate that the γ-TCD-based composite with its relatively larger cavity size can readily form inclusion complexes with analytes with bulky groups, and through inclusion complex formation, it can strongly adsorb many more analytes and has a size/structure selectivity compared to that of CS-based composites that can adsorb the analyte only by surface adsorption.

Facile synthesis, characterization, and antimicrobial activity of cellulose-chitosan-hydroxyapatite composite material: a potential material for bone tissue engineering

Hydroxyapatite (HAp) is often used as a bone-implant material because it is biocompatible and osteoconductive. However, HAp possesses poor rheological properties and it is inactive against disease-causing microbes. To improve these properties, we developed a green method to synthesize multifunctional composites containing: (1) cellulose (CEL) to impart mechanical strength; (2) chitosan (CS) to induce antibacterial activity thereby maintaining a microbe-free wound site; and (3) HAp. In this method, CS and CEL were co-dissolved in an ionic liquid (IL) and then regenerated from water. HAp was subsequently formed in situ by alternately soaking [CEL+CS] composites in aqueous solutions of CaCl2 and Na2 HPO4 . At least 88% of IL used was recovered for reuse by distilling the aqueous washings of [CEL+CS]. The composites were characterized using FTIR, XRD, and SEM. These composites retained the desirable properties of their constituents. For example, the tensile strength of the composites was enhanced 1.9 times by increasing CEL loading from 20% to 80%. Incorporating CS in the composites resulted in composites which inhibited the growth of both Gram positive (MRSA, S. aureus and VRE) and Gram negative (E. coli and P. aeruginosa) bacteria. These findings highlight the potential use of [CEL+CS+HAp] composites as scaffolds in bone tissue engineering.

Recyclable synthesis, characterization, and antimicrobial activity of chitosan-based polysaccharide composite materials

We have successfully developed a simple and totally recyclable method to synthesize novel, biocompatible, and biodegradable composite materials from cellulose (CEL) and chitosan (CS). In this method, [BMIm(+) Cl(-) ], an ionic liquid (IL), was used as a green solvent to dissolve and synthesize the [CEL+CS] composites. Since, the IL can be removed from the composites by washing them with water, and recovered by distilling the washed solution, the method is totally recyclable. Spectroscopic and imaging techniques including XRD, FTIR, NIR, and SEM were used to monitor the dissolution, to characterize and to confirm that CEL and CS were successfully regenerated. More importantly, we have successfully demonstrated that [CEL+CS] composite is particularly suited for many applications including antimicrobial property. This is because the composites have combined advantages of their components, namely superior chemical and mechanical stability (from CEL) and bactericide (from CS). Results of tensile strength measurements clearly indicate that adding CEL into CS substantially increase its tensile strength. Up to 5× increase in tensile strength can be achieved by adding 80% of CEL into CS. Results of in vitro antibacterial assays confirm that CS retains its antibacterial property in the composite. More importantly, the composites reported here can inhibit growth of wider range of bacteria than other CS-based materials prepared by conventional methods; that is over 24 h period, the composites substantially inhibited growth of bacteria such as MRSA, VRE, S. aureus, E. coli. These are bacteria that are often found to have the highest morbidity and mortality associated with wound infections.

Fluorescence water sensor based on covalent immobilization of chalcone derivative

A new fluorescence sensor for determining water content in organic solvents has been successfully demonstrated based on a fluorescent dye. 4'-N,N-dimethylamino-4 methylacryloylamino chalcone (DMC), in which the charge donor and acceptor parts were both contained, was copolymerized with acrylamide, hydroxyethyl methacrylate and triethylene glycol dimethacrylate onto glass surface. The fluorescence intensity of DMC decreased with increasing of water content in organic solvents owing to the formation of solvate complexes. DMC fluorescence intensity changed as a linear function of water content in the range of 0-6% in the samples of acetone, ethanol, and acetonitrile solutions. Satisfactory reproducibility, reversibility and a short response time were realized. With the optimum membrane described, detection limits were of 0.006%, 0.008%, and 0.002% for acetone, ethanol, and acetonitrile, respectively. The sensing membrane was found to have a lifetime at least 2 months.

Absorption of water by room-temperature ionic liquids: effect of anions on concentration and state of water

Near-infrared (NIR) spectrometry was successfully used for the non-invasive and in situ determination of concentrations and structure of water absorbed by room-temperature ionic liquids (RTILs). It was found that RTILs based on 1-butyl-3-methylimidazolium, namely, [BuMIm]+ [BF4]-, [BuMIm]+ [bis((trifluoromethyl)sulfonyl)amide, or Tf2N]- and [BuMIm]+ [PF6]-, are hydroscopic and can quickly absorb water when they are exposed to air. Absorbed water interacts with the anions of the RTILs, and these interactions lead to changes in the structure of water. Among the RTILs studied, [BF4]- provides the strongest interactions and [PF6]- the weakest. In 24 hours, [Bu-MIm]+ [BF4]- can absorb up to 0.320 M of water, whereas [Bu-MIm]+ [PF6]- can only absorb 8.3 x 10(-2) M of water. It seems that higher amounts of water can be absorbed when the anion of the RTIL can strongly interact and hence stabilize absorbed water molecules by forming hydrogen bonds with them or inducing hydrogen bonds among water molecules. More importantly, the NIR technique can be sensitively used for the noninvasive, in situ determination of absorbed water in RTILs, without any pretreatment, and at limits of detection as low as 3.20 x 10(-3) M.

Near-infrared spectrometric determination of di- and tripeptides synthesized by a combinatorial solid-phase method

A new method based on near-infrared (NIR) spectrometry and partial least-squares analysis has been developed for the noninvasive and nondestructive determination of the identity and sequences of amino acid residues in di- and tripeptides. The di- and tripeptides were synthesized from six amino acids with similar structures (Gly, Ala, Leu, Met, Phe, Val) on two different polymer beads (bead with and without a linker) using the solid-phase peptide synthetic method. The developed NIR method is capable of determining the identity of sequences of these di- and tripeptides (with and without the Fmoc protecting group) directly on the polymer beads. It can distinguish not only dipeptides from tripeptides but also peptides with very similar structures (e.g., bead-Gly-Ala-Ala, bead-Gly-Ala-Phe, bead-Gly-Ala-Leu, bead-Gly-Ala-Val, and bead-Gly-Ala-Met). More importantly, the method is capable of distinguishing di- and tripeptides with the same amino acid residues but different sequences (e.g., bead-Gly-Leu-Val from bead-Gly-Val-Leu).

Multispectral imaging microscope with millisecond time resolution

A new multispectral imaging microscope with micrometer spatial resolution and millisecond temporal resolution has been developed. The imaging microscope is based on the use of an acousto-optic tunable filter (AOTF) for spectral tuning and a progressive scan camera capable of snapshot operation for recording. It can operate in two modes: images are recorded as a function of time or wavelength. When operated as a function of time, the microscope is configured so that as many images as possible are recorded, grabbed, and stored per one wavelength. Upon completion, the AOTF is scanned to a new wavelength, and a new set of images are recorded. Up to 33 images/ second (i.e., 30 ms/image) can be recorded in this mode. In the other configuration, the recording wavelength is rapidly scanned (by means of the AOTF) and only one image is rapidly recorded, grabbed, and stored for each wavelength. Because additional time is needed to scan the AOTF, the maximum number of images can be grabbed in this case is 16 frames/s. Preliminary applications of the imaging microscope include measurements of photoinduced changes of a single unit cell in temperature-sensitive cholesteric liquid crystals as a function of time and wavelength. The changes were found to be varied with time and wavelength. Interestingly, the photoinduced changes of unit cells in the liquid crystal are not the same but different from cell to cell. This imaging microscope is particularly useful for measurements of small-size samples that undergo rapid chemical or biochemical reactions, e.g., activities of a single biological cell.

Thermal-Lens-Induced Anomalous Solvent's effect on Fluorescence Produced by Two-Photon Continuous-Wave Laser Excitation

Measurements of two-photon-excited fluorescence (TPF) of fluorescein and Rhodamine 6G in various solvents were performed with a continuous-wave (cw) laser for excitation and an acousto-optic tunable filter for spectral dispersion. Interestingly, the cw laser excitation produced an unwanted thermal-lens effect when the measurements were performed in solvents that absorb the excitation laser light (e.g., alcohols and water, because these solvents absorb the 780-nm excitation light through the overtone and combination transitions of the O-H group). The defocusing effect of the thermal lens leads to a decrease in the TPF signal. Because the strength of the thermal lens depends on the thermo-optical properties (dn/dT and thermal conductivity) of the solvent, its interference makes the effect of solvents on the TPF much different from those on one-photon-excited fluorescence. However, the thermal-lens interference will not limit the application of this cw laser excited TPF technique because, even when measurements were performed in solvents that absorb cw excitation laser light, the thermal-lens interference was observed only in solvents such as nonpolar organic solvents that have relatively better thermo-optical properties. Interference was not observed in water, which is the most widely used solvent for the TPF technique (because water has poor thermo-optical properties).

Near-infrared spectrophotometric determination of tri- and tetrapeptides

A new method based on the near infrared technique has been developed for the noninvasive and nondestructive determination of the identity and sequences of amino acid residues in small peptides. The method is capable of distinguishing not only peptides with very similar structures (e.g., Gly-Ala-Ala, Gly-Ala-Leu, Leu-Gly-Gly and Gly-Leu-Leu-Gly, Gly-Leu-Gly-Gly, Gly-Gly-Ala-Gly) but also peptides with the same amino acid residues but different sequences (e.g., Gly-Ala-Ala, Ala-Gly-Ala, Ala-Ala-Gly and Gly-Gly-Gly-Ala, Gly-Gly-Ala-Gly).

Simultaneous multispectral imaging in the visible and near-infrared region: applications in document authentication and determination of chemical inhomogeneity of copolymers

A new multispectral imaging spectrometer capable of simultaneously recording spectral images in the visible and near-infrared has been developed. In this instrument, an acoustooptic tunable filter is used to diffract an unpolarized incident light into two diffracted beams with orthogonal polarization; one of them is detected by a silicon camera for the visible region while the other beam is detected in the near-infrared region (from 1 to 1.7 microns) with a NIR camera. The imaging spectrometer is sensitive, inexpensive, and field deployable because it is based on the recently available InGaAs focal plane arrays camera, which is low cost and can be sensitively operated at room temperature. Preliminary applications of the imaging spectrometer include measurements of the visible and NIR absorption spectra of ink used to print U.S. currency. Such results may help to characterize samples as well as to control and to ensure the quality of the samples during the production processes. More important are the results obtained on ethylene/vinyl acetate copolymers. The NIR spectral images obtained clearly indicate that these copolymers exhibit a high degree of chemical inhomogeneity. Because of the possibility of inhomogeneity, it is very important that the homogeneity of polymers or copolymers be thoroughly understood before the NIR methods, especially those based on NIR spectrometers equipped with a single-element detector, are used for measurements.

Near-infrared thermal lens spectrometer based on an erbium-doped fiber amplifier and an acousto-optic tunable filter, and its application in the determination of nucleotides

A novel spectrometer that is based on the use of the thermal lens effect for sensitive measurements of absorption in the near-IR region has been developed. In this instrument the near-IR excitation light (from 1515 to 1590 nm) was provided by an erbium-doped fiber amplifier (EDFA). An acousto-optic tunable filter (AOTF) was used to spectrally disperse the light from the EDFA. The AOTF was used in a new configuration in which, instead of the diffracted light, the transmitted light was used. The heat generated as a consequence of the absorption of the near-IR excitation beam by the sample was monitored by a He-Ne laser. The sensitivity of this spectrometer was found to be at least two to three times higher than that of conventional transmission measurements. Its application in the sensitive determination of nucleotides (adenosine, cytidine, guanosine, and thymidine) is described.

Determination of monomethylhydrazine with a high-throughput, all-fiber near-infrared spectrometer based on an integrated acoustooptic tunable filter and an erbium-doped fiber amplifier

A novel integrated acoustooptic tunable filter (IAOTF) has been developed. This tunable filter is based on the Bragg interactions between waveguide and surface acoustic waves. Compared to (bulk) AOTF, its advantage include all-fiber construction, smaller size, narrower spectral resolution (1.7 nm), higher diffraction efficiency (37%), and lower rf power requirement (150 mW). A relatively narrow spectral tuning range (about 80 nm) is the only drawback for this integrated tunable filter. However, this disadvantage was overcome by judiciously using the filter for measurements in which its tuning range is coincident with the light source and also with absorption bands of analytes. In fact, an all-fiber, compact, high-throughput near-infrared spectrophotometer has been successfully constructed by synergistic use of this integrated AOTF and the erbium-doped fiber amplifier (EDFA), which has been shown to provide high intensity and wide spectral band-width in the near-infrared region from 1500 to 1600 nm. This spectral region is particularly useful for the determination of samples which have O-H and/or N-H groups. The all-fiber nature, compactness, high throughput, and high sensitivity of this spectrophotometer make it particularly suitable for on-line and real-time detection of trace gases in hostile environments, including leak detection of monomethylhydrazine (at a limit of detection of 191 ppm), which is often used as the hypergolic propellant for the space shuttle thruster systems.

Characterization of an erbium-doped fiber amplifier as a light source and development of a near-infrared spectrophotometer based on the EDFA and an acoustooptic tunable filter

A novel light source for the near-infrared region which has the highest intensity and widest spectral bandwidth of all near-IR light sources has been developed. The system is based on a single-mode fiber (about 18 m long) doped with Er3+ ion. The doped ion produces amplified spontaneous emission (ASE) in the near-IR region (from 1500 to 1600 nm) when it is excited by a diode laser at 980 nm. Because the diode laser is fusion-spliced directly to the doped fiber, the system is compact, all-solid-state, reliable, and stable and requires little maintenance. Its ASE output intensity was found to be comparable with those of diode lasers currently available for this near-IR region and is much higher than those of conventional halogen-tungsten lamps and the so-called (high-intensity) superluminescent light emitting diodes (SLEDs). Its spectral bandwidth is, however, much wider than those of the diode lasers and the SLEDs. Even higher intensity can be obtained from the doped fiber when a low-intensity (1 mW) light from a 1550-nm laser diode is introduced into the doped fiber. The intensity is enhanced (up to 7 times compared to the ASE) because the input light is amplified by the doped fiber. Furthermore, the output intensity of this erbium-doped fiber amplifier (EDFA) can be appropriately adjusted to provide relatively higher output intensity at any range of wavelengths (within this 1500-1600-nm region) by simply changing the temperature and/or the driven current of the input diode laser. Subsequently, an acoustooptic tunable filter was used to provide a means to spectrally tune the EDFA rapidly and to develop an all-solid-state, compact near-IR spectrophotometer which not only is very sensitive, stable, and reliable but also has a very high throughput. This spectrophotometer can detect water in ethanol at a limit of detection of 10 ppm. More importantly, the high through-put makes it possible to use the instrument to measure spectra of highly absorbing samples (e.g., absorption spectrum of 1.0 M Pr3+ aqueous solution through four sheets of paper); measurements which are currently not possible with halogen-tungsten lamp-based spectrophotometers.