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Tabarhoseini SM, Kale AS, Koniers PM, Boone AC, Bentor J, Boies A, Zhao H, Xuan X. Charge-Based Separation of Microparticles Using AC Insulator-Based Dielectrophoresis. Anal Chem 2024; 96:13672-13678. [PMID: 39126704 DOI: 10.1021/acs.analchem.4c02646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/12/2024]
Abstract
Surface charge is an important property of particles. It has been utilized to separate particles in microfluidic devices, where dielectrophoresis (DEP) is often the driving force. However, current DEP-based particle separations based on the charge differences work only for particles of similar sizes. They become less effective and may even fail for a mixture of particles differing in both charge and size. We demonstrate that our recently developed AC insulator-based dielectrophoresis (AC iDEP) technique can direct microparticles toward charge-dependent equilibrium positions in a ratchet microchannel. Such charge-based particle separation is controlled by the imposed AC voltage frequency and amplitude but is nearly unaffected by the size of either type of particle in the mixture except for the time required to achieve an effective separation. This AC iDEP technique may potentially be used to focus and separate submicron or even nanoparticles because of its virtually "infinite" channel length.
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Affiliation(s)
| | - Akshay Shridhar Kale
- Department of Engineering, University of Cambridge, Cambridge, CB2 1PZ, United Kingdom
| | - Peter Michael Koniers
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
| | - Anna Claire Boone
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
| | - Joseph Bentor
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
| | - Adam Boies
- Department of Engineering, University of Cambridge, Cambridge, CB2 1PZ, United Kingdom
| | - Hui Zhao
- Department of Mechanical Engineering, University of Nevada, Las Vegas, Nevada 89154, United States
| | - Xiangchun Xuan
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
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2
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Chen D, Huang Q, Ni Z, Xiang N. Particle focusing mechanisms in λ-DNA solution flowing in a straight microchannel. Electrophoresis 2024; 45:1379-1388. [PMID: 38343171 DOI: 10.1002/elps.202300295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 01/27/2024] [Accepted: 02/03/2024] [Indexed: 08/22/2024]
Abstract
Most biological fluids (such as blood, saliva, and lymph) in nature have certain viscoelasticity and are beginning to be used as the carrying fluids for viscoelastic microfluidics. However, the particle-focusing mechanisms in these new biological viscoelastic fluids are still unclear. In this work, the particle-focusing mechanisms in λ-DNA solutions were systematically explored. We first explored the particle focusing dynamics in a square cross-section under varied flow rates to uncover the effects of flow rate on particle focusing. Three focusing stages, from the classic five-position viscoelastic focusing to single-stream focusing and finally to multiplex-stream focusing, were clearly demonstrated. In addition, the particle focusing process along the channel length was demonstrated, and a first-fast-and-then-slow focusing process was clearly observed. Then, the effects of λ-DNA concentrations on particle focusing were explored and compared using the solutions with 0-25 ppm λ-DNA. Finally, we discussed the inferences of blockage ratio on particle focusing by changing the particle diameter and cross-sectional dimensions. Our work may provide a deeper understanding on the particle focusing mechanisms in biological viscoelastic fluids and lays a foundation for the subsequent particle counting and analysis and the development of low-cost portable flow cytometers.
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Affiliation(s)
- Dalin Chen
- School of Mechanical Engineering, and Jiangsu Key Laboratory for Design and Manufacture of Micro-Nano Biomedical Instruments, Southeast University, Nanjing, P. R. China
| | - Qiang Huang
- School of Mechanical Engineering, and Jiangsu Key Laboratory for Design and Manufacture of Micro-Nano Biomedical Instruments, Southeast University, Nanjing, P. R. China
| | - Zhonghua Ni
- School of Mechanical Engineering, and Jiangsu Key Laboratory for Design and Manufacture of Micro-Nano Biomedical Instruments, Southeast University, Nanjing, P. R. China
| | - Nan Xiang
- School of Mechanical Engineering, and Jiangsu Key Laboratory for Design and Manufacture of Micro-Nano Biomedical Instruments, Southeast University, Nanjing, P. R. China
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3
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Nasir Ahamed NN, Mendiola-Escobedo CA, Perez-Gonzalez VH, Lapizco-Encinas BH. Development of a DC-Biased AC-Stimulated Microfluidic Device for the Electrokinetic Separation of Bacterial and Yeast Cells. BIOSENSORS 2024; 14:237. [PMID: 38785711 PMCID: PMC11117482 DOI: 10.3390/bios14050237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2024] [Revised: 04/19/2024] [Accepted: 05/04/2024] [Indexed: 05/25/2024]
Abstract
Electrokinetic (EK) microsystems, which are capable of performing separations without the need for labeling analytes, are a rapidly growing area in microfluidics. The present work demonstrated three distinct binary microbial separations, computationally modeled and experimentally performed, in an insulator-based EK (iEK) system stimulated by DC-biased AC potentials. The separations had an increasing order of difficulty. First, a separation between cells of two distinct domains (Escherichia coli and Saccharomyces cerevisiae) was demonstrated. The second separation was for cells from the same domain but different species (Bacillus subtilis and Bacillus cereus). The last separation included cells from two closely related microbial strains of the same domain and the same species (two distinct S. cerevisiae strains). For each separation, a novel computational model, employing a continuous spatial and temporal function for predicting the particle velocity, was used to predict the retention time (tR,p) of each cell type, which aided the experimentation. All three cases resulted in separation resolution values Rs>1.5, indicating complete separation between the two cell species, with good reproducibility between the experimental repetitions (deviations < 6%) and good agreement (deviations < 18%) between the predicted tR,p and experimental (tR,e) retention time values. This study demonstrated the potential of DC-biased AC iEK systems for performing challenging microbial separations.
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Affiliation(s)
- Nuzhet Nihaar Nasir Ahamed
- Microscale Bioseparations Laboratory, Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, NY 14623, USA; (N.N.N.A.); (C.A.M.-E.)
| | - Carlos A. Mendiola-Escobedo
- Microscale Bioseparations Laboratory, Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, NY 14623, USA; (N.N.N.A.); (C.A.M.-E.)
- School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey 64700, Nuevo Leon, Mexico
| | - Victor H. Perez-Gonzalez
- School of Engineering and Sciences, Tecnologico de Monterrey, Monterrey 64700, Nuevo Leon, Mexico
| | - Blanca H. Lapizco-Encinas
- Microscale Bioseparations Laboratory, Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, NY 14623, USA; (N.N.N.A.); (C.A.M.-E.)
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4
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Nasir Ahamed NN, Mendiola-Escobedo CA, Perez-Gonzalez VH, Lapizco-Encinas BH. Assessing the Discriminatory Capabilities of iEK Devices under DC and DC-Biased AC Stimulation Potentials. MICROMACHINES 2023; 14:2239. [PMID: 38138408 PMCID: PMC10745336 DOI: 10.3390/mi14122239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2023] [Revised: 12/09/2023] [Accepted: 12/11/2023] [Indexed: 12/24/2023]
Abstract
There is a rising need for rapid and reliable analytical methods for separating microorganisms in clinical and biomedical applications. Microscale-insulator-based electrokinetic (iEK) systems have proven to be robust platforms for assessing a wide variety of microorganisms. Traditionally, iEK systems are usually stimulated with direct-current (DC) potentials. This work presents a comparison between using DC potentials and using DC-biased alternating-current (AC) potentials in iEK systems for the separation of microorganisms. The present study, which includes mathematical modeling and experimentation, compares the separation of bacterial and yeast cells in two distinct modes by using DC and DC-biased AC potentials. The quality of both separations, assessed in terms of separation resolution (Rs), showed a complete separation (Rs = 1.51) with the application of a DC-biased low-frequency AC signal but an incomplete separation (Rs = 0.55) with the application of an RMS-equivalent DC signal. Good reproducibility between experimental repetitions (<10%) was obtained, and good agreement (~18% deviation) was observed between modeling and experimental retention times. The present study demonstrates the potential of extending the limits of iEK systems by employing DC-biased AC potentials to perform discriminatory separations of microorganisms that are difficult to separate with the application of DC potentials.
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Affiliation(s)
- Nuzhet Nihaar Nasir Ahamed
- Microscale Bioseparations Laboratory, Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, NY 14623, USA;
| | | | | | - Blanca H. Lapizco-Encinas
- Microscale Bioseparations Laboratory, Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, NY 14623, USA;
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5
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Koh D, Sonker M, Arriaga EA, Ros A. Numerical modeling reveals improved organelle separation for dielectrophoretic ratchet migration. Electrophoresis 2023; 44:1826-1836. [PMID: 37622551 PMCID: PMC10905386 DOI: 10.1002/elps.202300091] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2023] [Revised: 08/01/2023] [Accepted: 08/07/2023] [Indexed: 08/26/2023]
Abstract
Organelle size varies with normal and abnormal cell function. Thus, size-based particle separation techniques are key to assessing the properties of organelle subpopulations differing in size. Recently, insulator-based dielectrophoresis (iDEP) has gained significant interest as a technique to manipulate sub-micrometer-sized particles enabling the assessment of organelle subpopulations. Based on iDEP, we recently reported a ratchet device that successfully demonstrated size-based particle fractionation in combination with continuous flow sample injection. Here, we used a numerical model to optimize the performance with flow rates a factor of three higher than previously and increased the channel volume to improve throughput. We evaluated the amplitude and duration of applied low-frequency DC-biased AC potentials improving separation efficiency. A separation efficiency of nearly 0.99 was achieved with the optimization of key parameters-improved from 0.80 in previous studies (Ortiz et al. Electrophoresis, 2022;43;1283-1296)-demonstrating that fine-tuning the periodical driving forces initiating the ratchet migration under continuous flow conditions can significantly improve the fractionation of organelles of different sizes.
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Affiliation(s)
- Domin Koh
- School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA
- Center for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, Arizona, USA
| | - Mukul Sonker
- School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA
- Center for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, Arizona, USA
| | - Edgar A Arriaga
- Department of Chemistry, University of Minnesota, Minneapolis, Minnesota, USA
| | - Alexandra Ros
- School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA
- Center for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, Arizona, USA
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6
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Raihan MK, Baghdady M, Dort H, Bentor J, Xuan X. Fluid Elasticity-Enhanced Insulator-Based Dielectrophoresis for Sheath-Free Particle Focusing in Very Dilute Polymer Solutions. Anal Chem 2023; 95:16013-16020. [PMID: 37856245 DOI: 10.1021/acs.analchem.3c03311] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2023]
Abstract
Focusing particles into a narrow stream is usually a necessary step in microfluidic flow cytometry and particle sorting. We demonstrate that the addition of a small amount of poly(ethylene oxide) (PEO) polymer into a buffer solution can reduce by almost 1 order of magnitude the threshold DC electric field for single-line dielectrophoretic focusing of particles in a constricted microchannel. The particle focusing effectiveness of this fluid elasticity-enhanced insulator-based dielectrophoresis (E-iDEP) in very dilute PEO solutions gets enhanced with the increase of the PEO molecular weight and particle size. These two trends are consistent with a theoretical analysis that accounts for the fluid elasticity effects on the electrokinetic and dielectrophoretic particle motions. Surprisingly, the particle-focusing effectiveness of E-iDEP is observed to first increase and then decrease with an increase in the PEO concentration.
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Affiliation(s)
- Mahmud Kamal Raihan
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
| | - Micah Baghdady
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
| | - Heston Dort
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
| | - Joseph Bentor
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
| | - Xiangchun Xuan
- Department of Mechanical Engineering, Clemson University, Clemson, South Carolina 29634, United States
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7
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Nan X, Zhang J, Wang X, Kang T, Cao X, Hao J, Jia Q, Qin B, Mei S, Xu Z. Design of a Low-Frequency Dielectrophoresis-Based Arc Microfluidic Chip for Multigroup Cell Sorting. MICROMACHINES 2023; 14:1561. [PMID: 37630097 PMCID: PMC10456708 DOI: 10.3390/mi14081561] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 07/29/2023] [Accepted: 07/31/2023] [Indexed: 08/27/2023]
Abstract
Dielectrophoresis technology is applied to microfluidic chips to achieve microscopic control of cells. Currently, microfluidic chips based on dielectrophoresis have certain limitations in terms of cell sorting species, in order to explore a microfluidic chip with excellent performance and high versatility. In this paper, we designed a microfluidic chip that can be used for continuous cell sorting, with the structural design of a curved channel and curved double side electrodes. CM factors were calculated for eight human healthy blood cells and cancerous cells using the software MyDEP, the simulation of various blood cells sorting and the simulation of the joule heat effect of the microfluidic chip were completed using the software COMSOL Multiphysics. The effect of voltage and inlet flow velocity on the simulation results was discussed using the control variables method. We found feasible parameters from simulation results under different voltages and inlet flow velocities, and the feasibility of the design was verified from multiple perspectives by measuring cell movement trajectories, cell recovery rate and separation purity. This paper provides a universal method for cell, particle and even protein sorting.
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Affiliation(s)
- Xueli Nan
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
- School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai 200030, China
| | - Jiale Zhang
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
| | - Xin Wang
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
| | - Tongtong Kang
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
| | - Xinxin Cao
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
| | - Jinjin Hao
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
| | - Qikun Jia
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
| | - Bolin Qin
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
| | - Shixuan Mei
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
| | - Zhikuan Xu
- School of Automation and Software Engineering, Shanxi University, Taiyuan 030006, China; (J.Z.); (X.W.); (T.K.); (X.C.); (J.H.); (Q.J.); (B.Q.); (S.M.); (Z.X.)
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8
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Cheng Y, Zhang S, Qin L, Zhao J, Song H, Yuan Y, Sun J, Tian F, Liu C. Poly(ethylene oxide) Concentration Gradient-Based Microfluidic Isolation of Circulating Tumor Cells. Anal Chem 2023; 95:3468-3475. [PMID: 36725367 DOI: 10.1021/acs.analchem.2c05257] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Circulating tumor cells (CTCs) have emerged as promising circulating biomarkers for non-invasive cancer diagnosis and management. Isolation and detection of CTCs in clinical samples are challenging due to the extreme rarity and high heterogeneity of CTCs. Here, we describe a poly(ethylene oxide) (PEO) concentration gradient-based microfluidic method for rapid, label-free, highly efficient isolation of CTCs directly from whole blood samples. Stable concentration gradients of PEO were formed within the microchannel by co-injecting the side fluid (blood sample spiked with 0.025% PEO) and center fluid (0.075% PEO solution). The competition between the elastic lift force and the inertial lift force enabled size-based separation of large CTCs and small blood cells based on their distinct migration patterns. The microfluidic device could process 1 mL of blood sample in 30 min, with a separation efficiency of >90% and an enrichment ratio of >700 for tumor cells. The isolated CTCs from blood samples were enumerated by immunofluorescence staining, allowing for discrimination of breast cancer patients from healthy donors with an accuracy of 84.2%. The concentration gradient-based microfluidic separation provides a powerful tool for label-free isolation of CTCs for a wide range of clinical applications.
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Affiliation(s)
- Yangchang Cheng
- Beijing Engineering Research Center for BioNanotechnology, CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology, Beijing 100190, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Shaohua Zhang
- Department of Oncology, Senior Department of Oncology, The Fifth Medical Center of PLA General Hospital, Beijing 100071, China
| | - Lili Qin
- Department of Oncology, Senior Department of Oncology, The Fifth Medical Center of PLA General Hospital, Beijing 100071, China
| | - Junxiang Zhao
- Beijing Engineering Research Center for BioNanotechnology, CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology, Beijing 100190, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hua Song
- Department of Oncology, Senior Department of Oncology, The Fifth Medical Center of PLA General Hospital, Beijing 100071, China
| | - Yang Yuan
- Department of Oncology, Senior Department of Oncology, The Fifth Medical Center of PLA General Hospital, Beijing 100071, China
| | - Jiashu Sun
- Beijing Engineering Research Center for BioNanotechnology, CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology, Beijing 100190, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Fei Tian
- Beijing Engineering Research Center for BioNanotechnology, CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology, Beijing 100190, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Chao Liu
- Beijing Engineering Research Center for BioNanotechnology, CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology, Beijing 100190, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, China
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9
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Serhatlioglu M, Jensen EA, Niora M, Hansen AT, Nielsen CF, Jansman MMT, Hosta-Rigau L, Dziegiel MH, Berg-Sørensen K, Hickson ID, Kristensen A. Viscoelastic Capillary Flow Cytometry. ADVANCED NANOBIOMED RESEARCH 2022. [DOI: 10.1002/anbr.202200137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Affiliation(s)
- Murat Serhatlioglu
- Department of Health Technology Technical University of Denmark Ørsteds Plads Building 345C 2800 Kongens Lyngby Denmark
| | - Emil Alstrup Jensen
- Department of Health Technology Technical University of Denmark Ørsteds Plads Building 345C 2800 Kongens Lyngby Denmark
| | - Maria Niora
- Department of Health Technology Technical University of Denmark Ørsteds Plads Building 345C 2800 Kongens Lyngby Denmark
| | - Anne Todsen Hansen
- Department of Clinical Immunology University of Copenhagen Blegdamsvej 9 2100 København Ø Denmark
| | - Christian Friberg Nielsen
- Center for Chromosome Stability Department of Cellular and Molecular Medicine University of Copenhagen 2200 København N. Denmark
| | | | - Leticia Hosta-Rigau
- Department of Health Technology Technical University of Denmark Ørsteds Plads Building 345C 2800 Kongens Lyngby Denmark
| | - Morten Hanefeld Dziegiel
- Department of Clinical Immunology University of Copenhagen Blegdamsvej 9 2100 København Ø Denmark
- Department of Clinical Medicine University of Copenhagen Blegdamsvej 3B 2200 København N. Denmark
| | - Kirstine Berg-Sørensen
- Department of Health Technology Technical University of Denmark Ørsteds Plads Building 345C 2800 Kongens Lyngby Denmark
| | - Ian David Hickson
- Center for Chromosome Stability Department of Cellular and Molecular Medicine University of Copenhagen 2200 København N. Denmark
| | - Anders Kristensen
- Department of Health Technology Technical University of Denmark Ørsteds Plads Building 345C 2800 Kongens Lyngby Denmark
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10
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Recent advances of integrated microfluidic systems for fungal and bacterial analysis. Trends Analyt Chem 2022. [DOI: 10.1016/j.trac.2022.116850] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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11
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Shi L, Zhong X, Wu T, Bian Q, Liu X, Miao H, Deng Y, Yin B, Zhou T. The electrodynamics of rod‐like microparticles based on optically induced dielectrophoresis. Electrophoresis 2022; 43:2175-2183. [DOI: 10.1002/elps.202200102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Revised: 09/03/2022] [Accepted: 09/06/2022] [Indexed: 11/07/2022]
Affiliation(s)
- Liuyong Shi
- Mechanical and Electrical Engineering College Hainan University Haikou P. R. China
| | - Xiangtao Zhong
- Mechanical and Electrical Engineering College Hainan University Haikou P. R. China
| | - Tao Wu
- Mechanical and Electrical Engineering College Hainan University Haikou P. R. China
| | - Qin Bian
- Mechanical and Electrical Engineering College Hainan University Haikou P. R. China
| | - Xiaomei Liu
- Mechanical and Electrical Engineering College Hainan University Haikou P. R. China
| | - Huaqing Miao
- Shenzhen Academy of Metrology & Quality Inspection Shenzhen P. R. China
| | - Yongbo Deng
- Changchun Institute of Optics Fine Mechanics and Physics (CIOMP) Chinese Academy of Science Changchun P. R. China
| | - Binfeng Yin
- School of Mechanical Engineering Yangzhou University Yangzhou P. R. China
| | - Teng Zhou
- Mechanical and Electrical Engineering College Hainan University Haikou P. R. China
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12
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Wu Y, Wang Y, Lu Y, Luo X, Huang Y, Xie T, Pilarsky C, Dang Y, Zhang J. Microfluidic Technology for the Isolation and Analysis of Exosomes. MICROMACHINES 2022; 13:1571. [PMID: 36295924 PMCID: PMC9607600 DOI: 10.3390/mi13101571] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Revised: 09/14/2022] [Accepted: 09/19/2022] [Indexed: 06/16/2023]
Abstract
Exosomes are lipid-bilayer enclosed vesicles with diameters of 30-150 nm, which play a pivotal role in cell communication by transporting their cargoes such as proteins, lipids, and genetic materials. In recent years, exosomes have been under intense investigation, as they show great promise in numerous areas, especially as bio-markers in liquid biopsies. However, due to the high heterogeneity and the nano size of exosomes, the separation of exosomes is not easy. This review will deliver an outline of the conventional methods and the microfluidic-based technologies for exosome separation. Particular attention is devoted to microfluidic devices, highlighting the efficiency of exosome isolation by these methods. Additionally, this review will introduce advances made in the integrated microfluidics technologies that enable the separation and analysis of exosomes.
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Affiliation(s)
- Yusong Wu
- Guangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology, NMPA and State Key Laboratory of Respiratory Disease, School of Pharmaceutical Sciences and the Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou 511436, China
| | - Yuqing Wang
- Guangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology, NMPA and State Key Laboratory of Respiratory Disease, School of Pharmaceutical Sciences and the Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou 511436, China
| | - Yanjun Lu
- Guangdong Provincial Key Laboratory of Micro/Nano Optomechatronics Engineering, College of Mechatronics and Control Engineering, Shenzhen University, Shenzhen 518060, China
| | - Xiaomei Luo
- Guangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology, NMPA and State Key Laboratory of Respiratory Disease, School of Pharmaceutical Sciences and the Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou 511436, China
| | - Yinghong Huang
- Guangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology, NMPA and State Key Laboratory of Respiratory Disease, School of Pharmaceutical Sciences and the Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou 511436, China
| | - Ting Xie
- Guangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology, NMPA and State Key Laboratory of Respiratory Disease, School of Pharmaceutical Sciences and the Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou 511436, China
| | - Christian Pilarsky
- Department of Surgery, Friedrich-Alexander University of Erlangen-Nuremberg (FAU), University Hospital of Erlangen, 91054 Erlangen, Germany
| | - Yuanye Dang
- Guangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology, NMPA and State Key Laboratory of Respiratory Disease, School of Pharmaceutical Sciences and the Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou 511436, China
| | - Jianye Zhang
- Guangzhou Municipal and Guangdong Provincial Key Laboratory of Molecular Target & Clinical Pharmacology, NMPA and State Key Laboratory of Respiratory Disease, School of Pharmaceutical Sciences and the Fifth Affiliated Hospital, Guangzhou Medical University, Guangzhou 511436, China
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13
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Ajala S, Muraleedharan Jalajamony H, Nair M, Marimuthu P, Fernandez RE. Comparing machine learning and deep learning regression frameworks for accurate prediction of dielectrophoretic force. Sci Rep 2022; 12:11971. [PMID: 35831342 PMCID: PMC9279499 DOI: 10.1038/s41598-022-16114-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Accepted: 07/05/2022] [Indexed: 11/09/2022] Open
Abstract
An intelligent sensing framework using Machine Learning (ML) and Deep Learning (DL) architectures to precisely quantify dielectrophoretic force invoked on microparticles in a textile electrode-based DEP sensing device is reported. The prediction accuracy and generalization ability of the framework was validated using experimental results. Images of pearl chain alignment at varying input voltages were used to build deep regression models using modified ML and CNN architectures that can correlate pearl chain alignment patterns of Saccharomyces cerevisiae(yeast) cells and polystyrene microbeads to DEP force. Various ML models such as K-Nearest Neighbor, Support Vector Machine, Random Forest, Neural Networks, and Linear Regression along with DL models such as Convolutional Neural Network (CNN) architectures of AlexNet, ResNet-50, MobileNetV2, and GoogLeNet have been analyzed in order to build an effective regression framework to estimate the force induced on yeast cells and microbeads. The efficiencies of the models were evaluated using Mean Absolute Error, Mean Absolute Relative, Mean Squared Error, R-squared, and Root Mean Square Error (RMSE) as evaluation metrics. ResNet-50 with RMSPROP gave the best performance, with a validation RMSE of 0.0918 on yeast cells while AlexNet with ADAM optimizer gave the best performance, with a validation RMSE of 0.1745 on microbeads. This provides a baseline for further studies in the application of deep learning in DEP aided Lab-on-Chip devices.
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Affiliation(s)
- Sunday Ajala
- Department of Engineering, Norfolk State University, Norfolk, USA
| | | | - Midhun Nair
- APJ Abdul Kalam Technological University, Thiruvananthapuram, India
| | - Pradeep Marimuthu
- Rajeev Gandhi College of Engineering and Technology, Puducherry, India
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14
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Tao Y, Liu W, Ge Z, Song C, Xue R, Ren Y. Numerical characterization of inter‐core coalescence by AC dielectrophoresis in double‐emulsion droplets. Electrophoresis 2022; 43:2141-2155. [DOI: 10.1002/elps.202200063] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2022] [Revised: 05/06/2022] [Accepted: 05/31/2022] [Indexed: 11/09/2022]
Affiliation(s)
- Ye Tao
- School of Mechatronics Engineering Harbin Institute of Technology Harbin 150001 P. R. China
| | - Weiyu Liu
- School of Electronics and Control Engineering Chang'an University Xi'an 710064 P. R. China
| | - Zhenyou Ge
- School of Mechatronics Engineering Harbin Institute of Technology Harbin 150001 P. R. China
| | - Chunlei Song
- School of Mechatronics Engineering Harbin Institute of Technology Harbin 150001 P. R. China
| | - Rui Xue
- School of Mechatronics Engineering Harbin Institute of Technology Harbin 150001 P. R. China
| | - Yukun Ren
- School of Mechatronics Engineering Harbin Institute of Technology Harbin 150001 P. R. China
- State Key Laboratory of Robotics and System Harbin Institute of Technology Harbin 150001 P. R. China
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15
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Yin S, Huang Y, Li H, Wong TN. Dynamics of alternating current electric field–assisted non‐Newtonian droplet formation with geometry confinement. Electrophoresis 2022; 43:2120-2129. [DOI: 10.1002/elps.202200056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Revised: 04/06/2022] [Accepted: 04/22/2022] [Indexed: 11/11/2022]
Affiliation(s)
- Shuai Yin
- School of Mechanical and Aerospace Engineering Nanyang Technological University Singapore Singapore
| | - Yi Huang
- School of Mechanical and Aerospace Engineering Nanyang Technological University Singapore Singapore
- Research Institute of Aero‐Engine Beihang University Beijing P. R. China
| | - Haiwang Li
- Research Institute of Aero‐Engine Beihang University Beijing P. R. China
| | - Teck Neng Wong
- School of Mechanical and Aerospace Engineering Nanyang Technological University Singapore Singapore
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16
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Vaghef-Koodehi A, Dillis C, Lapizco-Encinas BH. High-Resolution Charge-Based Electrokinetic Separation of Almost Identical Microparticles. Anal Chem 2022; 94:6451-6456. [PMID: 35441512 DOI: 10.1021/acs.analchem.2c00355] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Well-established techniques, e.g., chromatography and capillary electrophoresis, are available for separating nanosized particles, such as proteins. However, similar techniques for separating micron-sized particles are still needed. Insulator-based electrokinetic (iEK) systems can achieve efficient microparticle separations by combining linear and nonlinear EK phenomena. Of particular interest are charge-based separations, which could be employed for separating similar microorganisms, such as bacterial cells of the same size, same genus, or same strain. Several groups have reported charge-based separations of microparticles where a zeta potential difference of at least 40 mV between the microparticles was required. The present work pushes the limit of the discriminatory capabilities of iEK systems by reporting the charged-based separation of two microparticles of the same size (5.1 μm), same shape, same substrate material, and with a small difference in particle zeta potentials of only 3.6 mV, which is less than 10% of the difference in previous studies. By building an accurate COMSOL Multiphysics model, which correctly accounts for dielectrophoresis and electrophoresis of the second kind, it was possible to identify the conditions to achieve this challenging separation. Furthermore, the COMSOL model allowed predicting particle retention times (tR,p) which were compared with experimental values (tR,e). The separations results had excellent reproducibility in terms of tR,e with variations of only 9% and 11% between repetitions. These findings demonstrate that, by following a robust protocol that involves modeling and experimental work, it is possible to discriminate between highly similar particles, with much smaller differences in electrical charge than previously reported.
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Affiliation(s)
- Alaleh Vaghef-Koodehi
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, New York 14623, United States
| | - Curran Dillis
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, New York 14623, United States
| | - Blanca H Lapizco-Encinas
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, 160 Lomb Memorial Drive, Rochester, New York 14623, United States
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17
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Pethig R. Protein Dielectrophoresis: A Tale of Two Clausius-Mossottis-Or Something Else? MICROMACHINES 2022; 13:261. [PMID: 35208384 PMCID: PMC8876334 DOI: 10.3390/mi13020261] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Revised: 01/31/2022] [Accepted: 02/03/2022] [Indexed: 11/17/2022]
Abstract
Standard DEP theory, based on the Clausius-Mossotti (CM) factor derived from solving the boundary-value problem of macroscopic electrostatics, fails to describe the dielectrophoresis (DEP) data obtained for 22 different globular proteins over the past three decades. The calculated DEP force appears far too small to overcome the dispersive forces associated with Brownian motion. An empirical theory, employing the equivalent of a molecular version of the macroscopic CM-factor, predicts a protein's DEP response from the magnitude of the dielectric β-dispersion produced by its relaxing permanent dipole moment. A new theory, supported by molecular dynamics simulations, replaces the macroscopic boundary-value problem with calculation of the cross-correlation between the protein and water dipoles of its hydration shell. The empirical and formal theory predicts a positive DEP response for protein molecules up to MHz frequencies, a result consistently reported by electrode-based (eDEP) experiments. However, insulator-based (iDEP) experiments have reported negative DEP responses. This could result from crystallization or aggregation of the proteins (for which standard DEP theory predicts negative DEP) or the dominating influences of electrothermal and other electrokinetic (some non-linear) forces now being considered in iDEP theory.
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Affiliation(s)
- Ronald Pethig
- Institute for Integrated Micro and Nano Systems, School of Engineering & Electronics, The University of Edinburgh, The King's Buildings, Edinburgh EH9 3JF, UK
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Vaghef-Koodehi A, Lapizco-Encinas BH. Microscale electrokinetic-based analysis of intact cells and viruses. Electrophoresis 2021; 43:263-287. [PMID: 34796523 DOI: 10.1002/elps.202100254] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Revised: 11/08/2021] [Accepted: 11/11/2021] [Indexed: 12/11/2022]
Abstract
Miniaturized electrokinetic methods have proven to be robust platforms for the analysis and assessment of intact microorganisms, offering short response times and higher integration than their bench-scale counterparts. The present review article discusses three types of electrokinetic-based methodologies: electromigration or motion-based techniques, electrode-based electrokinetics, and insulator-based electrokinetics. The fundamentals of each type of methodology are discussed and relevant examples from recent reports are examined, to provide the reader with an overview of the state-of-the-art on the latest advancements on the analysis of intact cells and viruses with microscale electrokinetic techniques. The concluding remarks discuss the potential applications and future directions.
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Affiliation(s)
- Alaleh Vaghef-Koodehi
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, NY, USA
| | - Blanca H Lapizco-Encinas
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Rochester, NY, USA
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Lapizco-Encinas BH. The latest advances on nonlinear insulator-based electrokinetic microsystems under direct current and low-frequency alternating current fields: a review. Anal Bioanal Chem 2021; 414:885-905. [PMID: 34664103 DOI: 10.1007/s00216-021-03687-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 09/17/2021] [Accepted: 09/21/2021] [Indexed: 12/11/2022]
Abstract
This review article presents an overview of the evolution of the field of insulator-based dielectrophoresis (iDEP); in particular, it focuses on insulator-based electrokinetic (iEK) systems stimulated with direct current and low-frequency(< 1 kHz) AC electric fields. The article covers the surge of iDEP as a research field where many different device designs were developed, from microchannels with arrays of insulating posts to devices with curved walls and nano- and micropipettes. All of these systems allowed for the manipulation and separation of a wide array of particles, ranging from macromolecules to microorganisms, including clinical and biomedical applications. Recent experimental reports, supported by important theoretical studies in the field of physics and colloids, brought attention to the effects of electrophoresis of the second kind in these systems. These recent findings suggest that DEP is not the main force behind particle trapping, as it was believed for the last two decades. This new research suggests that particle trapping, under DC and low-frequency AC potentials, mainly results from a balance between electroosmotic and electrophoretic effects (linear and nonlinear); although DEP is present in these systems, it is not a dominant force. Considering these recent studies, it is proposed to rename this field from DC-iDEP to DC-iEK (and low-frequency AC-iDEP to low-frequency AC-iEK). Whereas much research is still needed, this is an exciting time in the field of microscale EK systems, as these new findings seem to explain the challenges with modeling particle migration and trapping in iEK devices, and provide perhaps a better understanding of the mechanisms behind particle trapping.
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Affiliation(s)
- Blanca H Lapizco-Encinas
- Microscale Bioseparations Laboratory and Biomedical Engineering Department, Rochester Institute of Technology, Institute Hall (Bldg. 73), Room 3103, 160 Lomb Memorial Drive, Rochester, NY, 14623-5604, USA.
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Perez‐Gonzalez VH. Particle trapping in electrically driven insulator-based microfluidics: Dielectrophoresis and induced-charge electrokinetics. Electrophoresis 2021; 42:2445-2464. [PMID: 34081787 PMCID: PMC9291494 DOI: 10.1002/elps.202100123] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 05/29/2021] [Accepted: 06/01/2021] [Indexed: 12/31/2022]
Abstract
Electrokinetically driven insulator‐based microfluidic devices represent an attractive option to manipulate particle suspensions. These devices can filtrate, concentrate, separate, or characterize micro and nanoparticles of interest. Two decades ago, inspired by electrode‐based dielectrophoresis, the concept of insulator‐based dielectrophoresis (iDEP) was born. In these microfluidic devices, insulating structures (i.e., posts, membranes, obstacles, or constrictions) built within the channel are used to deform the spatial distribution of an externally generated electric field. As a result, particles suspended in solution experience dielectrophoresis (DEP). Since then, it has been assumed that DEP is responsible for particle trapping in these devices, regardless of the type of voltage being applied to generate the electric field—direct current (DC) or alternating current. Recent findings challenge this assumption by demonstrating particle trapping and even particle flow reversal in devices that prevent DEP from occurring (i.e., unobstructed long straight channels stimulated with a DC voltage and featuring a uniform electric field). The theory introduced to explain those unexpected observations was then applied to conventional “DC‐iDEP” devices, demonstrating better prediction accuracy than that achieved with the conventional DEP‐centered theory. This contribution summarizes contributions made during the last two decades, comparing both theories to explain particle trapping and highlighting challenges to address in the near future.
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