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Antypov D, Collins CM, Vasylenko A, Gusev VV, Gaultois MW, Darling GR, Dyer MS, Rosseinsky MJ. Statistically Derived Proxy Potentials Accelerate Geometry Optimization of Crystal Structures. Chemphyschem 2024; 25:e202400254. [PMID: 38567647 DOI: 10.1002/cphc.202400254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2024] [Revised: 03/26/2024] [Accepted: 03/26/2024] [Indexed: 04/04/2024]
Abstract
The crystal structures of known materials contain the information about the interatomic interactions that produced these stable compounds. Similar to the use of reported protein structures to extract effective interactions between amino acids, that has been a useful tool in protein structure prediction, we demonstrate how to use this statistical paradigm to learn the effective inter-atomic interactions in crystalline inorganic solids. By analyzing the reported crystallographic data for inorganic materials, we have constructed statistically derived proxy potentials (SPPs) that can be used to assess how realistic or unusual a computer-generated structure is compared to the reported experimental structures. The SPPs can be directly used for structure optimization to improve this similarity metric, that we refer to as the SPP score. We apply such optimization step to markedly improve the quality of the input crystal structures for DFT calculations and demonstrate that the SPPs accelerate geometry optimization for three systems relevant to battery materials. As this approach is chemistry-agnostic and can be used at scale, we produced a database of all possible pair potentials in a tabulated form ready to use.
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Affiliation(s)
- Dmytro Antypov
- Department of Chemistry, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
- Leverhulme Research Centre for Functional Materials Design, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
| | - Christopher M Collins
- Department of Chemistry, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
- Leverhulme Research Centre for Functional Materials Design, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
| | - Andrij Vasylenko
- Department of Chemistry, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
- Leverhulme Research Centre for Functional Materials Design, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
| | - Vladimir V Gusev
- Department of Computer Science, University of Liverpool, Ashton Street, Liverpool, L69 3BX, UK
| | - Michael W Gaultois
- Department of Chemistry, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
- Leverhulme Research Centre for Functional Materials Design, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
| | - George R Darling
- Department of Chemistry, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
| | - Matthew S Dyer
- Department of Chemistry, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
- Leverhulme Research Centre for Functional Materials Design, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
| | - Matthew J Rosseinsky
- Department of Chemistry, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
- Leverhulme Research Centre for Functional Materials Design, University of Liverpool, 51 Oxford Street, Liverpool, L7 3NY, UK
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2
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Morscher A, Duff BB, Han G, Daniels LM, Dang Y, Zanella M, Sonni M, Malik A, Dyer MS, Chen R, Blanc F, Claridge JB, Rosseinsky MJ. Control of Ionic Conductivity by Lithium Distribution in Cubic Oxide Argyrodites Li 6+xP 1-xSi xO 5Cl. J Am Chem Soc 2022; 144:22178-22192. [PMID: 36413810 PMCID: PMC9732874 DOI: 10.1021/jacs.2c09863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Argyrodite is a key structure type for ion-transporting materials. Oxide argyrodites are largely unexplored despite sulfide argyrodites being a leading family of solid-state lithium-ion conductors, in which the control of lithium distribution over a wide range of available sites strongly influences the conductivity. We present a new cubic Li-rich (>6 Li+ per formula unit) oxide argyrodite Li7SiO5Cl that crystallizes with an ordered cubic (P213) structure at room temperature, undergoing a transition at 473 K to a Li+ site disordered F4̅3m structure, consistent with the symmetry adopted by superionic sulfide argyrodites. Four different Li+ sites are occupied in Li7SiO5Cl (T5, T5a, T3, and T4), the combination of which is previously unreported for Li-containing argyrodites. The disordered F4̅3m structure is stabilized to room temperature via substitution of Si4+ with P5+ in Li6+xP1-xSixO5Cl (0.3 < x < 0.85) solid solution. The resulting delocalization of Li+ sites leads to a maximum ionic conductivity of 1.82(1) × 10-6 S cm-1 at x = 0.75, which is 3 orders of magnitude higher than the conductivities reported previously for oxide argyrodites. The variation of ionic conductivity with composition in Li6+xP1-xSixO5Cl is directly connected to structural changes occurring within the Li+ sublattice. These materials present superior atmospheric stability over analogous sulfide argyrodites and are stable against Li metal. The ability to control the ionic conductivity through structure and composition emphasizes the advances that can be made with further research in the open field of oxide argyrodites.
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Affiliation(s)
- Alexandra Morscher
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Benjamin B. Duff
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.,Stephenson
Institute for Renewable Energy, University
of Liverpool, Peach Street, L69 7ZFLiverpool, U.K.
| | - Guopeng Han
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Luke M. Daniels
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Yun Dang
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Marco Zanella
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Manel Sonni
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Ahmad Malik
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Matthew S. Dyer
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Ruiyong Chen
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Frédéric Blanc
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.,Stephenson
Institute for Renewable Energy, University
of Liverpool, Peach Street, L69 7ZFLiverpool, U.K.
| | - John B. Claridge
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.
| | - Matthew J. Rosseinsky
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZDLiverpool, U.K.,
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3
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Leube B, Collins CM, Daniels LM, Duff BB, Dang Y, Chen R, Gaultois MW, Manning TD, Blanc F, Dyer MS, Claridge JB, Rosseinsky MJ. Cation Disorder and Large Tetragonal Supercell Ordering in the Li-Rich Argyrodite Li 7Zn 0.5SiS 6. CHEMISTRY OF MATERIALS : A PUBLICATION OF THE AMERICAN CHEMICAL SOCIETY 2022; 34:4073-4087. [PMID: 35573111 PMCID: PMC9097155 DOI: 10.1021/acs.chemmater.2c00320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 03/25/2022] [Indexed: 06/15/2023]
Abstract
A tetragonal argyrodite with >7 mobile cations, Li7Zn0.5SiS6, is experimentally realized for the first time through solid state synthesis and exploration of the Li-Zn-Si-S phase diagram. The crystal structure of Li7Zn0.5SiS6 was solved ab initio from high-resolution X-ray and neutron powder diffraction data and supported by solid-state NMR. Li7Zn0.5SiS6 adopts a tetragonal I4 structure at room temperature with ordered Li and Zn positions and undergoes a transition above 411.1 K to a higher symmetry disordered F43m structure more typical of Li-containing argyrodites. Simultaneous occupation of four types of Li site (T5, T5a, T2, T4) at high temperature and five types of Li site (T5, T2, T4, T1, and a new trigonal planar T2a position) at room temperature is observed. This combination of sites forms interconnected Li pathways driven by the incorporation of Zn2+ into the Li sublattice and enables a range of possible jump processes. Zn2+ occupies the 48h T5 site in the high-temperature F43m structure, and a unique ordering pattern emerges in which only a subset of these T5 sites are occupied at room temperature in I4 Li7Zn0.5SiS6. The ionic conductivity, examined via AC impedance spectroscopy and VT-NMR, is 1.0(2) × 10-7 S cm-1 at room temperature and 4.3(4) × 10-4 S cm-1 at 503 K. The transition between the ordered I4 and disordered F43m structures is associated with a dramatic decrease in activation energy to 0.34(1) eV above 411 K. The incorporation of a small amount of Zn2+ exercises dramatic control of Li order in Li7Zn0.5SiS6 yielding a previously unseen distribution of Li sites, expanding our understanding of structure-property relationships in argyrodite materials.
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Affiliation(s)
- Bernhard
T. Leube
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
| | - Christopher M. Collins
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
| | - Luke M. Daniels
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
| | - Benjamin B. Duff
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
- Stephenson
Institute for Renewable Energy, University
of Liverpool, Peach Street, L69 7ZF Liverpool, United Kindgom
| | - Yun Dang
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
| | - Ruiyong Chen
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
| | - Michael W. Gaultois
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
- Leverhulme
Research Centre for Functional Materials Design, Materials Innovation Factory, Oxford Street, L7 3NY Liverpool, United Kindgom
| | - Troy D. Manning
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
| | - Frédéric Blanc
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
- Stephenson
Institute for Renewable Energy, University
of Liverpool, Peach Street, L69 7ZF Liverpool, United Kindgom
- Leverhulme
Research Centre for Functional Materials Design, Materials Innovation Factory, Oxford Street, L7 3NY Liverpool, United Kindgom
| | - Matthew S. Dyer
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
- Leverhulme
Research Centre for Functional Materials Design, Materials Innovation Factory, Oxford Street, L7 3NY Liverpool, United Kindgom
| | - John B. Claridge
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
- Leverhulme
Research Centre for Functional Materials Design, Materials Innovation Factory, Oxford Street, L7 3NY Liverpool, United Kindgom
| | - Matthew J. Rosseinsky
- Department
of Chemistry, University of Liverpool, Crown Street, L69 7ZD Liverpool, United Kindgom
- Leverhulme
Research Centre for Functional Materials Design, Materials Innovation Factory, Oxford Street, L7 3NY Liverpool, United Kindgom
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4
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Vasylenko A, Gamon J, Duff BB, Gusev VV, Daniels LM, Zanella M, Shin JF, Sharp PM, Morscher A, Chen R, Neale AR, Hardwick LJ, Claridge JB, Blanc F, Gaultois MW, Dyer MS, Rosseinsky MJ. Element selection for crystalline inorganic solid discovery guided by unsupervised machine learning of experimentally explored chemistry. Nat Commun 2021; 12:5561. [PMID: 34548485 PMCID: PMC8455628 DOI: 10.1038/s41467-021-25343-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2021] [Accepted: 08/04/2021] [Indexed: 02/08/2023] Open
Abstract
The selection of the elements to combine delimits the possible outcomes of synthetic chemistry because it determines the range of compositions and structures, and thus properties, that can arise. For example, in the solid state, the elemental components of a phase field will determine the likelihood of finding a new crystalline material. Researchers make these choices based on their understanding of chemical structure and bonding. Extensive data are available on those element combinations that produce synthetically isolable materials, but it is difficult to assimilate the scale of this information to guide selection from the diversity of potential new chemistries. Here, we show that unsupervised machine learning captures the complex patterns of similarity between element combinations that afford reported crystalline inorganic materials. This model guides prioritisation of quaternary phase fields containing two anions for synthetic exploration to identify lithium solid electrolytes in a collaborative workflow that leads to the discovery of Li3.3SnS3.3Cl0.7. The interstitial site occupancy combination in this defect stuffed wurtzite enables a low-barrier ion transport pathway in hexagonal close-packing.
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Affiliation(s)
| | - Jacinthe Gamon
- Department of Chemistry, University of Liverpool, Liverpool, UK
| | - Benjamin B Duff
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Stephenson Institute for Renewable Energy, University of Liverpool, Liverpool, UK
| | - Vladimir V Gusev
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Leverhulme Research Centre for Functional Materials Design, Materials Innovation Factory, University of Liverpool, Liverpool, UK
| | - Luke M Daniels
- Department of Chemistry, University of Liverpool, Liverpool, UK
| | - Marco Zanella
- Department of Chemistry, University of Liverpool, Liverpool, UK
| | - J Felix Shin
- Department of Chemistry, University of Liverpool, Liverpool, UK
| | - Paul M Sharp
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Leverhulme Research Centre for Functional Materials Design, Materials Innovation Factory, University of Liverpool, Liverpool, UK
| | | | - Ruiyong Chen
- Department of Chemistry, University of Liverpool, Liverpool, UK
| | - Alex R Neale
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Stephenson Institute for Renewable Energy, University of Liverpool, Liverpool, UK
| | - Laurence J Hardwick
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Stephenson Institute for Renewable Energy, University of Liverpool, Liverpool, UK
| | - John B Claridge
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Leverhulme Research Centre for Functional Materials Design, Materials Innovation Factory, University of Liverpool, Liverpool, UK
| | - Frédéric Blanc
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Stephenson Institute for Renewable Energy, University of Liverpool, Liverpool, UK
- Leverhulme Research Centre for Functional Materials Design, Materials Innovation Factory, University of Liverpool, Liverpool, UK
| | - Michael W Gaultois
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Leverhulme Research Centre for Functional Materials Design, Materials Innovation Factory, University of Liverpool, Liverpool, UK
| | - Matthew S Dyer
- Department of Chemistry, University of Liverpool, Liverpool, UK
- Leverhulme Research Centre for Functional Materials Design, Materials Innovation Factory, University of Liverpool, Liverpool, UK
| | - Matthew J Rosseinsky
- Department of Chemistry, University of Liverpool, Liverpool, UK.
- Leverhulme Research Centre for Functional Materials Design, Materials Innovation Factory, University of Liverpool, Liverpool, UK.
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