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Liu Z, Zhang P, Mei C, Liang XT, Jha A, Duan HG. Transient Chiral Dynamics in the Fenna-Matthews-Olson Complex Revealed by Two-Dimensional Circular Dichroism Spectroscopy. J Phys Chem Lett 2024; 15:6550-6559. [PMID: 38885182 DOI: 10.1021/acs.jpclett.4c01179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/20/2024]
Abstract
Chirality plays a pivotal role across scientific disciplines with profound implications spanning light-matter interactions, molecular recognition, and natural evolutionary processes. This study delves into the active influence of molecular chirality on exciton energy transfer within photosynthetic protein complexes, focusing on the Fenna-Matthews-Olson (FMO) complex. Employing two-dimensional circular dichroism (2DCD) spectroscopy, we investigate the transient chiral dynamics of excitons during energy transfer processes within the FMO complex. Our approach, incorporating pulse information into population dynamics based on the third-order response function, facilitates the calculation of 2DCD spectra and dynamics. This enables the extraction of chiral contributions to excitonic energy transfer and the examination of electronic wave functions. We demonstrate that 2DCD spectra offer excitation energies that are better resolved than those from conventional two-dimensional electronic spectroscopy. These findings deepen our understanding of exciton energy transfer mechanisms in natural photosynthesis, emphasizing the potential of 2DCD spectroscopy as a powerful tool for unraveling the chiral contribution to exciton dynamics.
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Affiliation(s)
- Zihui Liu
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, P. R. China
| | - Panpan Zhang
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, P. R. China
| | - Chao Mei
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, P. R. China
| | - Xian-Ting Liang
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, P. R. China
| | - Ajay Jha
- Rosalind Franklin Institute, Harwell Campus, OX11 0QX Didcot, U.K
- Department of Pharmacology, University of Oxford, OX1 3QT Oxford, U.K
| | - Hong-Guang Duan
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, P. R. China
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Rouxel JR, Nam Y, Chernyak VY, Mukamel S. Manipulating ultrafast even-order nonlinear chiral responses of L-tryptophan by polarization pulse shaping. Proc Natl Acad Sci U S A 2024; 121:e2402660121. [PMID: 38820001 PMCID: PMC11161790 DOI: 10.1073/pnas.2402660121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Accepted: 04/23/2024] [Indexed: 06/02/2024] Open
Abstract
Molecular chirality has long been monitored in the frequency domain in the ultraviolet, visible, and infrared regimes. Recently developed time-domain approaches can detect time-dependent chiral dynamics by enhancing intrinsically weak chiral signals. Even-order nonlinear signals in chiral molecules have gained attention thanks to their existence in the electric dipole approximation, without relying on the weaker higher-order multipole interactions. We illustrate the optimization of temporal polarization pulse-shaping in various frequency ranges (infrared/optical and optical/X ray) to enhance chiral nonlinear signals. These signals can be recast as an overlap integral of matter and field pseudoscalars which contain the relevant chiral information. Simulations are carried out for second- and fourth-order nonlinear spectroscopies in L-tryptophan.
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Affiliation(s)
- Jérémy R. Rouxel
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, IL60439
| | - Yeonsig Nam
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, IL60439
| | | | - Shaul Mukamel
- Department of Chemistry, University of California, Irvine, CA92697-2025
- Department of Physics and Astronomy, University of California, Irvine, CA92697-2025
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Jadoun D, Kowalewski M. Coherent x-ray spontaneous emission spectroscopy of conical intersections. J Chem Phys 2024; 160:094102. [PMID: 38426516 DOI: 10.1063/5.0180976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Accepted: 02/16/2024] [Indexed: 03/02/2024] Open
Abstract
Conical intersections are known to play a vital role in many photochemical processes. The breakdown of the Born-Oppenheimer approximation in the vicinity of a conical intersection causes exciting phenomena, such as the ultrafast radiationless decay of excited states. The passage of a molecule through a conical intersection creates a coherent superposition of electronic states via nonadiabatic couplings. Detecting this coherent superposition may serve as a direct probe of the conical intersection. In this paper, we theoretically demonstrate the use of coherent spontaneous emission in samples with long-range order for probing the occurrence of a conical intersection in a molecule. Our simulations show that the spectrum contains clear signatures of the created coherent superposition of electronic states. We investigate the bandwidth requirements for the x-ray probes, which influence the observation of coherent superposition generated by the conical intersection.
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Affiliation(s)
- Deependra Jadoun
- Department of Physics, Stockholm University, Albanova University Centre, SE-106 91 Stockholm, Sweden
| | - Markus Kowalewski
- Department of Physics, Stockholm University, Albanova University Centre, SE-106 91 Stockholm, Sweden
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Rouxel JR, Mukamel S. Correction to Molecular Chirality and Its Monitoring by Ultrafast X-ray Pulses. Chem Rev 2024; 124:1321. [PMID: 38232747 DOI: 10.1021/acs.chemrev.3c00929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2024]
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Lubert-Perquel D, Acharya S, Johnson JC. Optically Addressing Exciton Spin and Pseudospin in Nanomaterials for Spintronics Applications. ACS APPLIED OPTICAL MATERIALS 2023; 1:1742-1760. [PMID: 38037653 PMCID: PMC10683369 DOI: 10.1021/acsaom.3c00299] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 10/26/2023] [Accepted: 10/26/2023] [Indexed: 12/02/2023]
Abstract
Oriented exciton spins that can be generated and manipulated optically are of interest for a range of applications, including spintronics, quantum information science, and neuromorphic computing architectures. Although materials that host such excitons often lack practical coherence times for use on their own, strategic transduction of the magnetic information across interfaces can combine fast modulation with longer-term storage and readout. Several nanostructure systems have been put forward due to their interesting magneto-optical properties and their possible manipulation using circularly polarized light. These material systems are presented here, namely two-dimensional (2D) systems due to the unique spin-valley coupling properties and quantum dots for their exciton fine structure. 2D magnets are also discussed for their anisotropic spin behavior and extensive 2D magnetic states that are not yet fully understood but could pave the way for emergent techniques of magnetic control. This review also details the experimental and theoretical tools to measure and understand these systems along with a discussion on the progress of optical manipulation of spins and magnetic order transitions.
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Affiliation(s)
- Daphné Lubert-Perquel
- Materials, Chemical, and
Computational Science Directorate, National
Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, Colorado 80401, United States
| | - Swagata Acharya
- Materials, Chemical, and
Computational Science Directorate, National
Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, Colorado 80401, United States
| | - Justin C. Johnson
- Materials, Chemical, and
Computational Science Directorate, National
Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, Colorado 80401, United States
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Fiechter MR, Svoboda V, Wörner HJ. Theoretical study of time-resolved photoelectron circular dichroism in the photodissociation of a chiral molecule. STRUCTURAL DYNAMICS (MELVILLE, N.Y.) 2023; 10:064103. [PMID: 38107245 PMCID: PMC10725305 DOI: 10.1063/4.0000213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Accepted: 11/27/2023] [Indexed: 12/19/2023]
Abstract
Photoelectron circular dichroism (PECD), the forward-backward asymmetry of the photoelectron angular distribution when ionizing randomly oriented chiral molecules with circularly polarized light, is an established method to investigate chiral properties of molecules in their electronic ground state. Here, we develop a computational strategy for predicting time-resolved PECD (TRPECD) of chemical reactions and demonstrate the method on the photodissociation of 1-iodo-2-methylbutane. Our approach combines multi-configurational quantum-chemical calculations of the relevant potential-energy surfaces of the neutral and singly ionized molecule with ab initio molecular-dynamics (AIMD) calculations. The PECD parameters along the AIMD trajectories are calculated with the aid of electron-molecule scattering calculations based on the Schwinger variational principle implemented in ePolyScat. Our calculations have been performed for two probe wavelengths (133 and 160 nm) accessible through low-order harmonic generation in gases. Our results show that the TRPECD is a highly sensitive probe of photochemical reaction dynamics. Most interestingly, the TRPECD is found to change sign multiple times along the photodissociation coordinate, in agreement with recent experiments on CHBrFI [Svoboda et al., "Femtosecond photoelectron circular dichroism of chemical reactions," Sci. Adv. 8, eabq2811 (2022)]. The computational protocol introduced in the present work is general and readily applicable to other chiral photochemical processes.
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Affiliation(s)
- Marit R. Fiechter
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zurich, Switzerland
| | - Vít Svoboda
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zurich, Switzerland
| | - Hans Jakob Wörner
- Laboratory of Physical Chemistry, ETH Zürich, 8093 Zurich, Switzerland
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Freixas VM, Rouxel JR, Nam Y, Tretiak S, Govind N, Mukamel S. X-ray and Optical Circular Dichroism as Local and Global Ultrafast Chiral Probes of [12]Helicene Racemization. J Am Chem Soc 2023; 145:21012-21019. [PMID: 37704187 DOI: 10.1021/jacs.3c07032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/15/2023]
Abstract
Chirality is a fundamental molecular property that plays a crucial role in biophysics and drug design. Optical circular dichroism (OCD) is a well-established chiral spectroscopic probe in the UV-visible regime. Chirality is most commonly associated with a localized chiral center. However, some compounds such as helicenes (Figure 1) are chiral due to their screwlike global structure. In these highly conjugated systems, some electric and magnetic allowed transitions are distributed across the entire molecule, and OCD thus probes the global molecular chirality. Recent advances in X-ray sources, in particular the control of their polarization and spatial profiles, have enabled X-ray circular dichroism (XCD), which, in contrast to OCD, can exploit the localized and element-specific nature of X-ray electronic transitions. XCD therefore is more sensitive to local structures, and the chirality probed with it can be referred to as local. During the racemization of helicene, between opposite helical structures, the screw handedness can flip locally, making the molecule globally achiral while retaining a local handedness. Here, we use the racemization mechanism of [12]helicene as a model to demonstrate the capabilities of OCD and XCD as time-dependent probes for global and local chiralities, respectively. Our simulations demonstrate that XCD provides an excellent spectroscopic probe for the time-dependent local chirality of molecules.
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Affiliation(s)
- Victor M Freixas
- Department of Chemistry and Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
| | - Jérémy R Rouxel
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Yeonsig Nam
- Department of Chemistry and Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
| | - Sergei Tretiak
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Niranjan Govind
- Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Shaul Mukamel
- Department of Chemistry and Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
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Liu Z, Jha A, Liang XT, Duan HG. Transient chiral dynamics revealed by two-dimensional circular dichroism spectroscopy. Phys Rev E 2023; 107:054119. [PMID: 37329099 DOI: 10.1103/physreve.107.054119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2022] [Accepted: 05/05/2023] [Indexed: 06/18/2023]
Abstract
Chirality has been considered as one of the key factors in the evolution of life in nature. It is important to uncover how chiral potentials of molecular systems play vital role in fundamental photochemical processes. Here, we investigate the role of chirality in photoinduced energy transfer in a model dimeric system, where the monomers are excitonically coupled. To observe transient chiral dynamics and energy transfer, we employ circularly polarized laser pulses in two-dimensional electronic spectroscopy to construct the two-dimensional circular dichroism (2DCD) spectral maps. Tracking time-resolved peak magnitudes in 2DCD spectra allows one to identify chirality induced population dynamics. The dynamics of energy transfer is revealed by the time-resolved kinetics of cross peaks. However, the differential signal of 2DCD spectra shows the magnitude of cross peaks is dramatically reduced at initial waiting time, which indicates the weak chiral interactions between two monomers. The downhill energy transfer is resolved by presenting a strong magnitude of cross peak in 2DCD spectra after long waiting time. The chiral contribution towards coherent and incoherent energy-transfer pathways in the model dimer system is further examined via control of excitonic couplings between two monomers. Applications are made to study the energy-transfer process in the Fenna-Matthews-Olson complex. Our work uncovers the potential of 2DCD spectroscopy to resolve the chiral-induced interactions and population transfers in excitonically coupled systems.
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Affiliation(s)
- Zihui Liu
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, P.R. China
| | - Ajay Jha
- Rosalind Franklin Institute, Harwell, Oxfordshire OX11 0QX, United Kingdom
- Department of Pharmacology, University of Oxford, Oxford OX1 3QT, United Kingdom
- Research Complex at Harwell, Rutherford Appleton Laboratory, Didcot OX11 0QX, United Kingdom
| | - Xian-Ting Liang
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, P.R. China
| | - Hong-Guang Duan
- Department of Physics, School of Physical Science and Technology, Ningbo University, Ningbo 315211, P.R. China
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