1
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Yuan M, Chen G, Xiao Y, Qu Y, Ren Y. The mechanisms of yeast extracellular metabolites in stimulating microbial degradation of trichloroethylene: Physiological characteristics and omics analysis. ENVIRONMENTAL RESEARCH 2024; 255:119193. [PMID: 38777296 DOI: 10.1016/j.envres.2024.119193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 05/16/2024] [Accepted: 05/20/2024] [Indexed: 05/25/2024]
Abstract
The biodegradation of Trichloroethylene (TCE) is limited by low microbial metabolic capacity but can be enhanced through biostimulation strategies. This study explored the physiological effects and potential molecular mechanisms of the yeast Yarrowia lipolytica extracellular metabolites (YEMs) on the degradation of TCE by Acinetobacter LT1. Results indicated that YEMs stimulated the efficiency of strain LT1 by 50.28%. At the physiological level, YEMs exhibited protective effects on cell morphology, reduced oxidative stress, lessened membrane damage, and enhanced energy production and conversion. Analysis of omics results revealed that the regulation of various metabolic pathways by YEMs improved the degradation of TCE. Furthermore, RT-qPCR showed that the genes encoding YhhW protein in TCE stress and YEMs stimulation groups were 1.72 and 3.22 times the control group, respectively. Molecular docking results showed that the conformation of YhhW after binding to TCE changed into a more active form, which enhanced enzyme activity. Therefore, it is speculated that YhhW is the primary degradative enzyme involved in the process of YEMs stimulating strain LT1 to degrade TCE. These results reveal how YEMs induce strain LT1 to enhance TCE degradation.
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Affiliation(s)
- Meng Yuan
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Guotao Chen
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Yibo Xiao
- Protoga Biotechnology Co., Ltd., Shenzhen 518000, China; Microalgae Biosynthesis R&D Center, Research Institute of Tsinghua University in Shenzhen, Shenzhen 518057, China
| | - Yujiao Qu
- Protoga Biotechnology Co., Ltd., Shenzhen 518000, China; Microalgae Biosynthesis R&D Center, Research Institute of Tsinghua University in Shenzhen, Shenzhen 518057, China
| | - Yuan Ren
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, China; The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, Guangzhou 510006, China; The Key Laboratory of Environmental Protection and Eco-Remediation of Guangdong Regular Higher Education Institutions, Guangzhou 510006, China.
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2
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Liu M, Chen G, Xu L, He Z, Ye Y. Environmental remediation approaches by nanoscale zero valent iron (nZVI) based on its reductivity: a review. RSC Adv 2024; 14:21118-21138. [PMID: 38966811 PMCID: PMC11223516 DOI: 10.1039/d4ra02789b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Accepted: 06/27/2024] [Indexed: 07/06/2024] Open
Abstract
The fast rise of organic and metallic pollution has brought significant risks to human health and the ecological environment. Consequently, the remediation of wastewater is in extremely urgent demand and has received increasing attention. Nanoscale zero valent iron (nZVI) possesses a high specific surface area and distinctive reactive interfaces, which offer plentiful active sites for the reduction, oxidation, and adsorption of contaminants. Given these abundant functionalities of nZVI, it has undergone significant and extensive studies on environmental remediation, linking to various mechanisms, such as reduction, oxidation, surface complexation, and coprecipitation, which have shown great promise for application in wastewater treatment. Among these functionalities of nZVI, reductivity is particularly important and widely adopted in dehalogenation, and reduction of nitrate, nitro compounds, and metal ions. The following review comprises a short survey of the most recent reports on the applications of nZVI based on its reductivity. It contains five sections, an introduction to the theme, chemical reduction applications, electrolysis-assisted reduction applications, bacterium-assisted reduction applications, and conclusions about the reported research with perspectives for future developments. Review and elaboration of the recent reductivity-dependent applications of nZVI may not only facilitate the development of more effective and sustainable nZVI materials and the protocols for comprehensive utilization of nZVI, but may also promote the exploration of innovative remediation approaches based on its reductivity.
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Affiliation(s)
- Mingyue Liu
- School of Pharmaceutical and Chemical Engineering, Taizhou University Taizhou 318000 Zhejiang Province China
| | - Gang Chen
- School of Pharmaceutical and Chemical Engineering, Taizhou University Taizhou 318000 Zhejiang Province China
| | - Linli Xu
- School of Pharmaceutical and Chemical Engineering, Taizhou University Taizhou 318000 Zhejiang Province China
| | - Zhicai He
- School of Pharmaceutical and Chemical Engineering, Taizhou University Taizhou 318000 Zhejiang Province China
| | - Yuyuan Ye
- School of Pharmaceutical and Chemical Engineering, Taizhou University Taizhou 318000 Zhejiang Province China
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3
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Liu M, Su X, Yuan J, Chen Y, Huang X, Yang X, Zheng J, Li Q, Xu J, He Y. Residual effects of chlorinated organic pollutants on microbial community and natural redox processes in coastal wetlands. JOURNAL OF HAZARDOUS MATERIALS 2024; 465:133364. [PMID: 38176260 DOI: 10.1016/j.jhazmat.2023.133364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Revised: 12/11/2023] [Accepted: 12/22/2023] [Indexed: 01/06/2024]
Abstract
Chlorinated organic pollutants (COPs) are common in flooded environments. To examine the residual status and effects of COPs on flooded environments, a survey of 7 coastal wetlands in Zhejiang, East China was conducted. Total COP concentrations detected from 95.69 to 412.76 ng g-1 dw. Gamma-HCH and o,p'-DDT posed the greatest risk with exceedance rates of 100% according to sediment quality guidelines. Samples with higher COP pollution had higher microbial diversity, more complex microbial networks, more deterministic community assembly processes and lower microbiome stability, indicating an improved soil function for balance cycle of substances, especially for COP degradation. Further analysis using quantitative real-time PCR suggested COP-dechlorination interacted with natural redox processes, especially sulfate reduction and methanogenesis. The positive correlation between CH4 and pentachlorobenzene indicated a potential increase in greenhouse gas emissions caused by COP pollution. Correlation between dsr gene and COPs demonstrated the ability of sulfate-reducing bacteria to degrade COPs. Particularly, facultative OHRB such as sulfate-reducing bacteria hold significant importance in the process of COP-dechlorination. This finding provides a reference for COP pollution remediation. Collectively, our study offers new insight into the residual effect of COPs in coastal wetlands and contributes to an improved understanding of bioremediation strategies for COP pollution.
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Affiliation(s)
- Meng Liu
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Xin Su
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Jing Yuan
- Department of Urban Studies and Planning, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Yuxuan Chen
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Xiaowei Huang
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Xueling Yang
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Jinjin Zheng
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Qinfen Li
- Environmental and Plant Protection Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, Hainan, China
| | - Jianming Xu
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Yan He
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China; Key Laboratory of Environment Remediation and Ecological Health, Ministry of Education, Hangzhou 310058, China.
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4
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Gao X, Dai C, Tian X, Nie Y, Shi J. Self-acclimation mechanism of pyrite to sulfamethoxazole concentration in terms of degradation behavior and toxicity effects caused by reactive oxygen species. JOURNAL OF HAZARDOUS MATERIALS 2024; 464:132962. [PMID: 37976862 DOI: 10.1016/j.jhazmat.2023.132962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 10/26/2023] [Accepted: 11/07/2023] [Indexed: 11/19/2023]
Abstract
Pyrite has been extensively tested for oxidizing contaminants via the activation of water molecule or dissolved oxygen, while the changing of oxidation species induced by contaminant's concentration has been largely underestimated. In this study, we revealed a self-acclimation mechanism of pyrite in terms of •OH conversion to 1O2 during the sulfamethoxazole (SMX) degradation process under oxic conditions. Two reaction stages of SMX degradation by pyrite were observed. The SMX concentration decreased by 70% rapidly in the first 12 h after the reaction was initiated, then, the removal rate began to decrease as the SMX concentration decreased. Importantly, •OH and O2•- were the dominant oxidizing species in stage one, while 1O2 was responsible for the further degradation of SMX in stage two. The self-acclimated mechanism of pyrite was proven to be caused by the conversion of oxidative species at the surface of pyrite. This process can overcome the shortages of •OH such as ultrashort lifetime and limited effective diffusion in the decontamination of micropollutant. Moreover, different reactive oxygen species will lead to different degradation pathways and environmental toxicity while degrading pollutants. This finding of oxidizing species' self-acclimation mechanism should be of concern when using pyrite for water treatment.
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Affiliation(s)
- Xuyun Gao
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan 430074, PR China
| | - Chu Dai
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan 430074, PR China
| | - Xike Tian
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan 430074, PR China; State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, PR China
| | - Yulun Nie
- Faculty of Materials Science and Chemistry, China University of Geosciences, Wuhan 430074, PR China; State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan 430074, PR China.
| | - Jianbo Shi
- School of Environmental Studies, China University of Geosciences, Wuhan 430074, PR China
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5
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Miranda EM, McLaughlin CM, Reep JK, Edgar M, Landrum C, Severson C, Grubb DG, Hamdan N, Hansen S, Santisteban L, Delgado AG. High Efficacy Two-Stage Metal Treatment Incorporating Basic Oxygen Furnace Slag and Microbiological Sulfate Reduction. ACS ES&T ENGINEERING 2024; 4:433-444. [PMID: 38357246 PMCID: PMC10862489 DOI: 10.1021/acsestengg.3c00381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 12/19/2023] [Accepted: 12/19/2023] [Indexed: 02/16/2024]
Abstract
Lignocellulosic sulfate-reducing biochemical reactors (SRBRs) can be implemented as passive treatment for mining-influenced water (MIW) mitigating the potentially deleterious effects of MIW acidic pH, and high concentrations of metal(loid)s and SO42-. In this study, a novel two-stage treatment for MIW was designed, where basic oxygen furnace slag (slag stage) and microbial SO42- reduction (SRBR stage) were incorporated in series. The SRBRs contained spent brewing grains or sugarcane bagasse as sources of lignocellulose. The slag reactor removed >99% of the metal(loid) concentration present in the MIW (130 ± 40 mg L-1) and increased MIW pH from 2.6 ± 0.2 to 12 ± 0.3. The alkaline effluent pH of the slag reactor was mitigated by remixing slag effluent with acidic MIW before SRBR treatment. The SRBR stage removed the bulk of SO42- from MIW, additional metal(loid)s, and yielded a circumneutral effluent pH. Cadmium, copper, and zinc showed high removal rates in SRBRs (≥96%) and likely precipitated as sulfide minerals. The microbial communities developed in SRBRs were enriched in hydrolytic, fermentative, and sulfate-reducing taxa. However, the SRBRs developed distinct community compositions due to the different lignocellulose sources employed. Overall, this study underscores the potential of a two-stage treatment employing steel slag and SRBRs for full-scale implementation at mining sites.
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Affiliation(s)
- Evelyn M. Miranda
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Avenue, Tempe, Arizona 85287, United States
- Engineering
Research Center for Bio-Mediated & Bio-Inspired Geotechnics (CBBG), Arizona State University, 425 E. University Dr., Tempe, Arizona 85281, United States
- School
for Engineering of Matter, Transport and Energy, Arizona State University, 501 E. Tyler Mall, Tempe, Arizona 85281, United States
| | - Caleb M. McLaughlin
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Avenue, Tempe, Arizona 85287, United States
- Engineering
Research Center for Bio-Mediated & Bio-Inspired Geotechnics (CBBG), Arizona State University, 425 E. University Dr., Tempe, Arizona 85281, United States
- School
of Sustainable Engineering and the Built Environment, Arizona State University, 660 S. College Avenue, Tempe, Arizona 85281, United States
| | - Jeffrey K. Reep
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Avenue, Tempe, Arizona 85287, United States
- Engineering
Research Center for Bio-Mediated & Bio-Inspired Geotechnics (CBBG), Arizona State University, 425 E. University Dr., Tempe, Arizona 85281, United States
- School
of Sustainable Engineering and the Built Environment, Arizona State University, 660 S. College Avenue, Tempe, Arizona 85281, United States
| | - Michael Edgar
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Avenue, Tempe, Arizona 85287, United States
- Engineering
Research Center for Bio-Mediated & Bio-Inspired Geotechnics (CBBG), Arizona State University, 425 E. University Dr., Tempe, Arizona 85281, United States
- School
of Sustainable Engineering and the Built Environment, Arizona State University, 660 S. College Avenue, Tempe, Arizona 85281, United States
| | - Colton Landrum
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Avenue, Tempe, Arizona 85287, United States
- Engineering
Research Center for Bio-Mediated & Bio-Inspired Geotechnics (CBBG), Arizona State University, 425 E. University Dr., Tempe, Arizona 85281, United States
| | - Carli Severson
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Avenue, Tempe, Arizona 85287, United States
- Engineering
Research Center for Bio-Mediated & Bio-Inspired Geotechnics (CBBG), Arizona State University, 425 E. University Dr., Tempe, Arizona 85281, United States
| | - Dennis G. Grubb
- Jacobs
Engineering, 2001 Market
St., Suite 900, Philadelphia, Pennsylvania 19104, United States
| | - Nasser Hamdan
- Engineering
Research Center for Bio-Mediated & Bio-Inspired Geotechnics (CBBG), Arizona State University, 425 E. University Dr., Tempe, Arizona 85281, United States
- School
of Sustainable Engineering and the Built Environment, Arizona State University, 660 S. College Avenue, Tempe, Arizona 85281, United States
| | - Shane Hansen
- Freeport-McMoRan
Inc., 800 E. Pima Mine Road, Sahuarita, Arizona 85629, United States
| | - Leonard Santisteban
- Freeport-McMoRan
Inc., 800 E. Pima Mine Road, Sahuarita, Arizona 85629, United States
| | - Anca G. Delgado
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Avenue, Tempe, Arizona 85287, United States
- Engineering
Research Center for Bio-Mediated & Bio-Inspired Geotechnics (CBBG), Arizona State University, 425 E. University Dr., Tempe, Arizona 85281, United States
- School
of Sustainable Engineering and the Built Environment, Arizona State University, 660 S. College Avenue, Tempe, Arizona 85281, United States
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6
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Robles A, Sundar SV, Mohana Rangan S, Delgado AG. Butanol as a major product during ethanol and acetate chain elongation. Front Bioeng Biotechnol 2023; 11:1181983. [PMID: 37274171 PMCID: PMC10233103 DOI: 10.3389/fbioe.2023.1181983] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Accepted: 05/08/2023] [Indexed: 06/06/2023] Open
Abstract
Chain elongation is a relevant bioprocess in support of a circular economy as it can use a variety of organic feedstocks for production of valuable short and medium chain carboxylates, such as butyrate (C4), caproate (C6), and caprylate (C8). Alcohols, including the biofuel, butanol (C4), can also be generated in chain elongation but the bioreactor conditions that favor butanol production are mainly unknown. In this study we investigated production of butanol (and its precursor butyrate) during ethanol and acetate chain elongation. We used semi-batch bioreactors (0.16 L serum bottles) fed with a range of ethanol concentrations (100-800 mM C), a constant concentration of acetate (50 mM C), and an initial total gas pressure of ∼112 kPa. We showed that the butanol concentration was positively correlated with the ethanol concentration provided (up to 400 mM C ethanol) and to chain elongation activity, which produced H2 and further increased the total gas pressure. In bioreactors fed with 400 mM C ethanol and 50 mM C acetate, a concentration of 114.96 ± 9.26 mM C butanol (∼2.13 g L-1) was achieved after five semi-batch cycles at a total pressure of ∼170 kPa and H2 partial pressure of ∼67 kPa. Bioreactors with 400 mM C ethanol and 50 mM C acetate also yielded a butanol to butyrate molar ratio of 1:1. At the beginning of cycle 8, the total gas pressure was intentionally decreased to ∼112 kPa to test the dependency of butanol production on total pressure and H2 partial pressure. The reduction in total pressure decreased the molar ratio of butanol to butyrate to 1:2 and jolted H2 production out of an apparent stall. Clostridium kluyveri (previously shown to produce butyrate and butanol) and Alistipes (previously linked with butyrate production) were abundant amplicon sequence variants in the bioreactors during the experimental phases, suggesting the microbiome was resilient against changes in bioreactor conditions. The results from this study clearly demonstrate the potential of ethanol and acetate-based chain elongation to yield butanol as a major product. This study also supports the dependency of butanol production on limiting acetate and on high total gas and H2 partial pressures.
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Affiliation(s)
- Aide Robles
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ, United States
- Engineering Research Center for Bio-Mediated and Bio-Inspired Geotechnics, Arizona State University, Tempe, AZ, United States
| | - Skanda Vishnu Sundar
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ, United States
| | - Srivatsan Mohana Rangan
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ, United States
- Engineering Research Center for Bio-Mediated and Bio-Inspired Geotechnics, Arizona State University, Tempe, AZ, United States
| | - Anca G. Delgado
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, AZ, United States
- Engineering Research Center for Bio-Mediated and Bio-Inspired Geotechnics, Arizona State University, Tempe, AZ, United States
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