Degradation of Glyphosate by Mn-Oxide May Bypass Sarcosine and Form Glycine Directly after C-N Bond Cleavage

In the presence of the other: How glyphosate and peptide molecules alter the dynamics of sorption on goethite

The interactions with soil mineral surfaces are among the factors that determine the mobility and bioavailability of organic contaminants and of nutrients present in dissolved organic matter (DOM) in soil and aquatic environments. While most studies focus on high molar mass organic matter fractions (e.g., humic and fulvic acids), very few studies investigate the impact of DOM constituents in competitive sorption. Here we assess the sorption behavior of a heavily used herbicide (i.e., glyphosate) and a component of DOM (i.e., a peptide) at the water/goethite interface, inclusive of potential glyphosate-peptide interactions. We used in-situ ATR-FTIR (attenuated total reflectance Fourier-transform infrared) spectroscopy to study sorption kinetics and mechanisms of interaction as well as conformational changes to the secondary structure of the peptide. NMR (nuclear magnetic resonance) spectroscopy was used to assess the level of interaction between glyphosate and the peptide and changes to the peptide' secondary structure in solution. For the first time, we illustrate competition for sorption sites results in co-sorption of glyphosate and peptide molecules that affects the extent, kinetics, and mechanism of interaction of each with the surface. In the presence of the peptide, the formation of outer-sphere glyphosate-goethite complexes is favored albeit inner-sphere glyphosate-goethite bonds (i.e., POFe) are still formed. The presence of glyphosate induces secondary structural shifts of the sorbed peptide that maximizes the formation of H-bonds with the goethite surface. However, glyphosate and the peptide do not seem to interact with one another in solution nor at the goethite surface upon sorption. The results of this work highlight potential consequences of competition for sorption sites, for example the transport of organic contaminants and nutrient-rich (i.e., nitrogen) DOM components in relevant environmental systems. Predicting the rate and extent with which organic pollutants are removed from solution by a given solid is also one of the most critical factors for the design of effective sorption systems in engineering applications.

Elucidation of the role of metals in the adsorption and photodegradation of herbicides by metal-organic frameworks

Here, four MOFs, namely Sc-TBAPy, Al-TBAPy, Y-TBAPy, and Fe-TBAPy (TBAPy: 1,3,6,8-tetrakis(p-benzoic acid)pyrene), were characterized and evaluated for their ability to remediate glyphosate (GP) from water. Among these materials, Sc-TBAPy demonstrates superior performance in both the adsorption and degradation of GP. Upon light irradiation for 5 min, Sc-TBAPy completely degrades 100% of GP in a 1.5 mM aqueous solution. Femtosecond transient absorption spectroscopy reveals that Sc-TBAPy exhibits enhanced charge transfer character compared to the other MOFs, as well as suppressed formation of emissive excimers that could impede photocatalysis. This finding was further supported by hydrogen evolution half-reaction (HER) experiments, which demonstrated Sc-TBAPy's superior catalytic activity for water splitting. In addition to its faster adsorption and more efficient photodegradation of GP, Sc-TBAPy also followed a selective pathway towards the oxidation of GP, avoiding the formation of toxic aminomethylphosphonic acid observed with the other M3+-TBAPy MOFs. To investigate the selectivity observed with Sc-TBAPy, electron spin resonance, depleted oxygen conditions, and solvent exchange with D2O were employed to elucidate the role of different reactive oxygen species on GP photodegradation. The findings indicate that singlet oxygen (1O2) plays a critical role in the selective photodegradation pathway achieved by Sc-TBAPy.

Effect of temperature on the degradation of glyphosate by Mn-oxide: Products and pathways of degradation

Glyphosate is the most commonly used herbicide in the United States. In the environment, glyphosate residues can either degrade into more toxic and persistent byproducts such as aminomethylphosphonic acid (AMPA) or environmentally benign species such as sarcosine or glycine. In this research, the birnessite-catalyzed degradation of glyphosate was studied under environmentally relevant temperatures (10-40 °C) using high-performance liquid chromatography, inductively coupled plasma mass spectrometry, nuclear magnetic resonance, and theoretical calculations. Our results show a temperature-dependent degradation pathway preference for AMPA and glycine production. The AMPA and glycine pathways are competitive at short reaction times, but the glycine pathway became increasingly preferred as reaction time and temperature increased. The measured free energy barriers are comparable for both the glycine and AMPA pathways (93.5 kJ mol-1 for glycine and 97.1 kJ mol-1 for AMPA); however, the entropic energy penalty for the AMPA pathway is significantly greater than the glycine pathway (-TΔS‡ = 26.2 and 42.8 kJ mol-1 for glycine and AMPA, respectively). These findings provide possible routes for biasing glyphosate degradation towards safer products, thus to decrease the overall environmental toxicity.

Unraveling the role of polysaccharide-goethite associations on glyphosate' adsorption-desorption dynamics and binding mechanisms

HYPOTHESIS

Glyphosate retention at environmental interfaces is strongly governed by adsorption and desorption processes. In particular, glyphosate can react with organo-mineral associations (OMAs) in soils, sediments, and aquatic environments. We hypothesize mineral-adsorbed biomacromolecules modulate the extent and rate of glyphosate adsorption and desorption where electrostatic and noncovalent interactions with organo-mineral surfaces are favored.

EXPERIMENTS

Here we use in-situ attenuated total reflectance Fourier-transform infrared, X-ray photoelectron spectroscopy, and batch experiments to characterize glyphosate' adsorption and desorption mechanisms and kinetics at an organo-mineral interface. Model polysaccharide-goethite OMAs are prepared with a range of organic (polysaccharide, PS) surface loadings. Sequential adsorption-desorption studies are conducted by introducing glyphosate and background electrolyte solutions, respectively, to PS-goethite OMAs.

FINDINGS

We find the extent of glyphosate adsorption at PS-goethite interfaces was reduced compared to that at the goethite interface. However, increased polysaccharide surface loading resulted in lower relative glyphosate desorption. At the same time, increased PS surface loading yielded slower glyphosate adsorption and desorption kinetics compared to corresponding processes at the goethite interface. We highlight that adsorbed PS promotes the formation of weak noncovalent interactions between glyphosate and PS-goethite OMAs, including the evolution of hydrogen bonds between (i) the amino group of glyphosate and PS and (ii) the phosphonate group of glyphosate and goethite. It is also observed that glyphosate' phosphonate group preferentially forms inner-sphere monodentate complexes with goethite in PS-goethite whereas bidentate configurations are favored on goethite.

Phototransformation of phosphite induced by zinc oxide nanoparticles (ZnO NPs) in aquatic environments

Phosphite, an essential component in the biogeochemical phosphorus cycle, may make significant contributions to the bioavailable phosphorus pool as well as water eutrophication. However, to date, the potential impacts of coexisting photochemically active substances on the environmental fate and transformation of phosphite in aquatic environments have been sparsely elucidated. In the present study, the effect of zinc oxide nanoparticles (ZnO NPs), a widely distributed photocatalyst in aquatic environments, on phosphite phototransformation under simulated solar irradiation was systematically investigated. The physicochemical characteristics of the pristine and reacted ZnO NPs were thoroughly characterized. The results showed that the presence of ZnO NPs induced the indirect phototransformation of phosphite to phosphate, and the reaction rate increased with increasing ZnO NPs concentration. Through experiments with quenching and trapping free radicals, it was proved that photogenerated reactive oxygen species (ROS), such as hydroxyl radical (•OH), superoxide anion (O2•-), and singlet oxygen (1O2), made substantial contributions to phosphite phototransformation. In addition, the influencing factors such as initial phosphite concentration, pH, water matrixes (Cl-, F-, Br-, SO42-, NO3-, NO2-, HCO3-, humic acid (HA) and citric acid (CA)) were investigated. The component of generated precipitates after the phosphite phototransformation induced by ZnO NPs was still dominated by ZnO NPs, while the presence of amorphous Zn3(PO4)2 was identified. This work explored ZnO NPs-mediated phosphite phototransformation processes, indicating that nanophotocatalysts released into aquatic environments such as ZnO NPs may function as photosensitizers to play a beneficial role in the transformation of phosphite to phosphate, thereby potentially mitigating the toxicity of phosphite to aquatic organisms while exacerbating eutrophication. The findings of this study provide a novel insight into the comprehensive assessment of the environmental fate, potential ecological risk, and biogeochemical behaviors of phosphite in natural aquatic environments under the condition of combined pollution.

Fluorine-doped BiVO4 photocatalyst: Preferential cleavage of C-N bond for green degradation of glyphosate

With increasing concerns on the environment and human health, the degradation of glyphosate through the formation of less toxic intermediates is of great importance. Among the developed methods for the degradation of glyphosate, photodegradation is a clean and efficient strategy. In this work, we report a new photocatalyst by doping F ion on BiVO₄ that can efficiently degrade glyphosate and reduce the toxic emissions of aminomethylphosphonic acid (AMPA) through the selective (P)-C-N cleavage in comparison of BiVO₄ catalyst. The results demonstrate that the best suppression of AMPA formation was achieved by the catalyst of 0.3F@BiVO₄ at pH = 9 (AMPA formation below 10%). In situ attenuated total reflectance Fourier transforms infrared (ATR-FTIR) spectroscopy indicates that the adsorption sites of glyphosate on BiVO₄ and 0.3F@BiVO₄ are altered due to the difference in electrostatic interactions. Such an absorption alteration leads to the preferential cleavage of the C-N bond on the N-C-P skeleton, thereby inhibiting the formation of toxic AMPA. These results improve our understanding of the photodegradation process of glyphosate catalyzed by BiVO₄-based catalysts and pave a safe way for abiotic degradation of glyphosate.

Detoxification and metabolism of glyphosate by a Pseudomonas sp. via biogenic manganese oxidation

Biogenic manganese oxides (BMO) are widely distributed in groundwater and provides promise for adsorbing and oxidizing a wide range of micropollutants, however, the continuous biodegradation and bioavailability of micropollutants via cycle biogenic Mn(II) oxidation remains to be elucidated. In this study, glyphosate was degraded and to serve as the nutrient source by a Pseudomonas sp. QJX-1. The addition of glyphosate will not affect the Mn(II) oxidation function of the strain but will affect its Mn(II) oxidation process and effect. The glyphosate degradation products could further be used as the C, N and P sources for bacterium growth. Analysis of the RNA-seq data suggested that Mn(II) oxidation driven by oxidoreductases for glyphosate degradation. The long-term column experiments using biological Mn(II) cycling to realize continuous detoxification and metabolism of glyphosate, and thus revealed the synergism effects of biological and chemical conversion on toxic micropollutants and continuous metabolism in an aquatic ecosystem.

Fate of glyphosate and its degradation products AMPA, glycine and sarcosine in an agricultural soil: Implications for environmental risk assessment

Glyphosate can be biodegraded via the aminomethylphosponic acid (AMPA) and the sarcosine/glycine pathway leading to the formation of three intermediate products AMPA, sarcosine or glycine. The fate of the three intermediate compounds of glyphosate biodegradation including nature of non-extractable residues (NERs; harmless biogenic [NERs_biogenic] versus hazardous xenobiotic [NERs_xenobiotic]) in soils has not been investigated yet. This information is crucial for an assessment of environmental risks related to the speciation of glyphosate-derived NERs which may stem from glyphosate intermediates. Therefore, we incubated ¹³C- and ¹⁵N-labeled glyphosate (2-¹³C,¹⁵N-glyphosate) and its degradation product AMPA (¹³C,¹⁵N-AMPA), sarcosine (¹³C₃,¹⁵N-sarcosine) or glycine (¹³C₂,¹⁵N-glycine) in an agricultural soil separately for a period of 75 days. ¹³C₂-glycine and ¹³C₃-sarcosine mineralized rapidly compared to 2-¹³C-glyphosate and ¹³C-AMPA. The mineralization of ¹³C-AMPA was lowest among all four compounds due to its persistent nature. Only 0.5% of the initially added 2-¹³C,¹⁵N-glyphosate and still about 30% of the initially added ¹³C,¹⁵N-AMPA was extracted from soil after 75 days. The NERs formed from ¹³C,¹⁵N-AMPA were mostly NERs_xenobiotic as compared to other three compounds for which significant amounts of NERs_biogenic were determined. We noticed 2-¹³C,¹⁵N-glyphosate was biodegraded via two biodegradation pathways simultaneously; however, the sarcosine/glycine pathway with the formation of harmless NERs_biogenic presumably dominated.

Synthesis of Synthetic Musks: A Theoretical Study Based on the Relationships between Structure and Properties at Molecular Scale

Synthetic musks (SMs), as an indispensable odor additive, are widely used in various personal care products. However, due to their physico-chemical properties, SMs were detected in various environmental media, even in samples from arctic regions, leading to severe threats to human health (e.g., abortion risk). Environmentally friendly and functionally improved SMs have been theoretically designed in previous studies. However, the synthesizability of these derivatives has barely been proven. Thus, this study developed a method to verify the synthesizability of previously designed SM derivatives using machine learning, 2D-QSAR, 3D-QSAR, and high-throughput density functional theory in order to screen for synthesizable, high-performance (odor sensitivity), and environmentally friendly SM derivatives. In this study, three SM derivatives (i.e., D52, D37, and D25) were screened and recommended due to their good performances (i.e., high synthesizability and odor sensitivity; low abortion risk; and bioaccumulation ability in skin keratin). In addition, the synthesizability mechanism of SM derivatives was also analyzed. Results revealed that high intramolecular hydrogen bond strength, electrostatic interaction, qH⁺ value, energy gap, and low E_HOMO would lead to a higher synthesizability of SMs and their derivatives. This study broke the synthesizability bottleneck of theoretically designed environment-friendly SM derivatives and advanced the mechanism of screening functional derivatives.

Ecological risk assessment of glyphosate and its possible effect on bacterial community in surface sediments of a typical shallow Lake, northern China

Glyphosate is a widely used herbicide worldwide and its prevalent presence in aquatic ecosystems poses a threat to living organisms. This study evaluated potential ecological risk of glyphosate to sediment-dwelling organisms and assessed the probable effect of glyphosate on structure and predicated function of sediment-attached bacterial communities from a large shallow lake in northern China based on 16S rRNA high-throughput sequencing. Results suggested that glyphosate showed a medium to high concentration (up to 8.63 mg/kg) and chronic risk to sediment-dwelling organisms (10% samples exhibiting medium to high risk quotient), especially in sites nearby farmland and residential areas in August. Bacterial community identification based on 16S rRNA sequence indicated some species of dominant phylum Proteobacteria and Campilobacterota (e.g., Steroidobacteraceae, Thiobacillus, Gallionellaceae, Sulfurimonadaceae) were stimulated while some species of dominant phylum Actinobacteriota, Acidobacteriota and Firmicutes (e.g., Nocardioidaceae, Microtrichales, Vicinamibacteraceae, Paenisporosarcina) were inhibited by glyphosate accumulation. The stimulating species were related to sulfur-oxidizing, sulfate-, iron-, or nitrate-reducing bacteria; The inhibiting species were related to plant bacterial endophytes, polyphosphate-accumulating organisms (PAOs) and denitrifers. Correspondingly, promoted bacterial metabolic functions of "sulfite respiration", "nitrogen respiration", "aromatic compound degradation" and "nitrification" but suppressed "cellulolysis", "manganese oxidation", "anoxygenic photoautotrophy S oxidizing" and "nitrate denitrification" were predicated on functional annotation of prokaryotic taxa. Although these results could only partly suggest the impacts of glyphosate on the bacterial communities due to the lack of actual results from control experiments, the identified Steroidobacteraceae could be thought as a bioindicator in the future mechanism study for the ecological effect and bioremediation of glyphosate. This work intends to arise the concern about the depletion of biodiversity and bacterial metabolic functions with contribution of glyphosate in part in eutrophic lakes.

Cladophora can mitigate the shock of glyphosate-containing wastewater on constructed wetlands coupled with microbial fuel cells

This study investigated the performance of constructed wetlands coupled with microbial fuel cells (CW-MFCs) treating agricultural wastewater containing glyphosate (N-phosphonomethyl glycine, PMG), and the use of Cladophora as a cathode plant in this system. Ten devices were divided into Cladophora groups (CGs) and no Cladophora groups (NGs), with five PMG concentrations (0, 10, 25, 50, and 100 mg/L). PMG removal efficiency significantly decreased with increasing PMG (P < 0.01) and was higher in CG devices than in NG devices at low PMG concentrations (<50 mg/L). The removal efficiency of chemical oxygen demand (COD) and NH₄⁺ in CGs was significantly higher than in NGs (P < 0.01). The highest power densities of 6.37 (CGs) and 6.26 mW/m² (NGs) were obtained at 50 mg/L PMG, and the average voltage was significantly higher in CGs than in NGs (p < 0.01). Moreover, PMG had a negative effect on the enrichment of electrochemically active bacteria, but Cladophora could mitigate this effect. The abundance of the resistance gene epsps was stabilized; The phnJ gene increased with increasing PMG in NGs and was downregulated at high PMG concentration in CGs, indicating better microbial adaptation to PMG in CGs throughout the experiment.

Phosphate addition enhances alkaline extraction of glyphosate from highly sorptive soils and aquatic sediments

BACKGROUND

Analytical constraints complicate environmental monitoring campaigns of the herbicide glyphosate and its major degradation product aminomethylphosphonic acid (AMPA): their strong sorption to soil minerals requires harsh extraction conditions. Coextracted matrix compounds impair downstream analysis and must be removed before analysis.

RESULTS

A new extraction method combined with subsequent capillary electrophoresis-mass spectrometry for derivatization-free analysis of glyphosate and AMPA in soil and sediment was developed and applied to a suite of environmental samples. It was compared to three extraction methods from literature. We show that no extraction medium reaches 100% recovery. The new phosphate-supported alkaline extraction method revealed (1) high recoveries of 70-90% for soils and aquatic sediments, (2) limits of detections below 20 μg kg-1 , and (3) a high robustness, because impairing matrix components (trivalent cations and humic acids) were precipitated prior to the analysis. Soil and sediment samples collected around Tübingen, Germany, revealed maximum glyphosate and AMPA residues of 80 and 2100 μg kg-1 , respectively, with residues observed along a core of lake sediments. Glyphosate and/or AMPA were found in 40% of arable soils and 57% of aquatic sediment samples.

CONCLUSION

In this work, we discuss soil parameters that influence (de)sorption and thus extraction. From our results we conclude that residues of glyphosate in environmental samples are easily underestimated. With its possible high throughput, the method presented here can resolve current limitations in monitoring campaigns of glyphosate by addressing soil and aquatic sediment samples with critical sorption characteristics.

Enhanced photocatalytic activity of glyphosate over a combination strategy of GQDs/TNAs heterojunction composites

A photocatalytic process was used to effectively remove glyphosate, an emerging pollutant and contaminant, through advanced oxidation. For this purpose, a feasible combination strategy of two-step anodisation and electrodeposition methods were proposed to fabricate graphene quantum dots (GQDs) supported titanium dioxide nanotube arrays (TNAs). The resultant GQDs/TNAs heterojunction composite exhibited significant degradation reactivity and circulation stability for glyphosate due to its excellent photo-generated electron and hole separation ability. After the introduction of GQDs into TNAs, the photodegradation efficiency of glyphosate increased from 69.5% to 94.7% within 60 min under UV-Vis light irradiation (λ = 320-780 nm). By analysing the intermediate products and through the evolvement of heteroatoms during glyphosate photodegradation, alanine and serine were discovered for the first time, and a detailed degradation mechanism of glyphosate was proposed. This study indicates that GQDs/TNAs heterojunction composite can almost completely degrade the glyphosate into inorganics under the appropriate conditions.

The fate of a hazardous herbicide: a DFT-based ab initio study on glyphosate degradation

Glyphosate degradation has been extensively examined; however, only a few detailed computational studies have been performed on the topic so far. There are substantial differences between the degradation products of glyphosate, as AMPA (aminomethylphosphonic acid) is toxic while sarcosine intermediate is non-toxic. These species can have different effects on the environment and, indirectly, on the human body. We performed calculations using density functional theory and post-Hartree-Fock correlated ab initio methods to find the possible mechanisms for the degradation process by small (hydroxyl, peroxyl, and superoxide) radicals. We found that direct sarcosine formation is strongly dependent on the concentration of the radical species. AMPA and glycine were mostly formed as aldehyde derivatives, while in addition to the former, glyoxylate and bicarbonate are formed alternatively. A significant pH effect was also found for the competitive reactions determined by the calculated rate constants of the elementary steps. Overall barriers showed similarities by DFT but ab initio methods could separate them.

Glyphosate and nutrients removal from simulated agricultural runoff in a pilot pyrrhotite constructed wetland

Pyrrhotite is often considered as a gangue mineral, and discarded in mine wastes and tailings. Glyphosate and fertilizer, often excessively used in agriculture, flow into water bodies with agriculture runoff, and cause pollution of water bodies. In this study, the pyrrhotite was used as a substrate in a pilot constructed wetland (CW) to remove the glyphosate and nutrients from simulated agriculture runoff. In nearly one year, the pilot pyrrhotite constructed wetland (Pyrr-CW) removed 90.3 ± 6.1% of glyphosate, 88.2 ± 5.1 of total phosphorus (TP) and 60.40 ± 5.60% of total nitrogen (TN) on average, much higher than the control CW. The abundances of sulfur-oxidizing bacteria, such as Sulfurifustis, Sulfuriferula and Thiobacillus, were much higher in the Pyrr-CW than those in the control CW. In the Pyrr-CW goethite was produced by pyrrhotite aerobic oxidation (PAO) and pyrrhotite autotrophic denitrification (PAD) continuously and spontaneously. Higher glyphosate and TP removals were resulted from adsorption on the goethite produced, and higher TN removal was attributed to the PAD. High glyphosate and nutrients removal could keep a long term until the pyrrhotite in the Pyrr-CW was used up. The phosphorus (P) sequestered in the Pyrr-CW existed mainly in organic P, (Fe + Al)P and (Ca + Mg)P, and their order was (Fe + Al)P > organic P > (Ca + Mg)P. No heavy metal ions released from the Pyrr-CW. With higher and lasting removal rate, and lower cost, the Pyrr-CW is a promising technology for simultaneous glyphosate and nutrients removal from agricultural runoff and wastewater.

Thermal decomposition kinetics of glyphosate (GP) and its metabolite aminomethylphosphonic acid (AMPA)

Glyphosate (GP) is a widely used herbicide worldwide, yet accumulation of GP and its main byproduct, aminomethylphosphonic acid (AMPA), in soil and water has raised concerns about its potential effects on human health. Thermal treatment, in which contaminants are vaporised and decomposed in the gas-phase, is one option for decontaminating material containing GP and AMPA, yet the thermal decomposition chemistry of these compounds remains poorly understood. Here, we have revealed the thermal decomposition mechanism of GP and AMPA in the gas phase by applying computational chemistry and reaction rate theory methods. The preferred decomposition channel for both substances involves the elimination of P(OH)3 to yield the imine N-methylene-glycine (from GP) or methanimine (from AMPA), with relatively low barrier heights (ca. 45 kcal mol-1). The half-life of GP and AMPA at 1000 K are predicted to be 0.1 and 4 ms respectively, and they should be readily destroyed via conventional incineration processes. The further decomposition of N-methylene-glycine is expected to also take place at similar temperatures, leading to N-methyl-methanimine + CO2, with a barrier height of ca. 48 kcal mol-1. The imine decomposition products of GP and AMPA are expected to react with water vapour to form simple amines and carbonyl compounds.

Impact of dissolved O2 on phenol oxidation by δ-MnO2

Although redox reactions of organic contaminants with manganese oxides have been extensively studied, the role of dissolved O2 in these processes has largely been overlooked. In this study, the oxidative degradation of phenol by δ-MnO2 was investigated under both oxic and anoxic conditions. Dissolved O2 inhibited phenol degradation due to its promoting role in the reoxidation and precipitation of reduced Mn(ii) to Mn(iii) on the δ-MnO2 surface, resulting in partial transformation of δ-MnO2 to "c-disordered" H+-birnessite at pH 5.5 and feitknechtite, manganite, and hausmannite at pH 7.0 and 8.5. The reformed Mn(iii) phases could reduce phenol oxidation by blocking reactive sites of δ-MnO2. In addition, dissolved O2 caused a higher degree of particle agglomeration and a more severe specific surface area decrease, and hence lower reactivity of δ-MnO2. These findings revealed that after reductive dissolution by phenol and reoxidation by dissolved O2 throughout continuous redox cycling, δ-MnO2 became less reactive rather than being regenerated. These results can provide new insights into the understanding of the oxidation of organic contaminants by manganese oxides in the natural environment.

Degradation of glyphosate and bioavailability of phosphorus derived from glyphosate in a soil-water system

Glyphosate, the most commonly used herbicide in the world, can be degraded into more toxic and persistent products such as aminomethylphosphonic acid (AMPA) or non-toxic products such as sarcosine and glycine. In this study, we used liquid chromatography mass spectrometry (LC-MS) and electrospray ionization (ESI) source Q Extractive Orbitrap mass spectrometry (ESI-Orbitrap MS) to identify glyphosate degradation products and combined with sequential extraction and stable isotopes to investigate the degradation of glyphosate and transformation of phosphorous (P) product in a soil-water system. The LC-MS and ESI-Orbitrap MS results showed that glycine formed during the early stage but was rapidly utilized by soil microorganisms. AMPA started to accumulate at the late stage and was found to be 3-6 times more resistant than glyphosate against degradation; while no sarcosine was formed. The 18O labeling and phosphate oxygen isotope results allowed a clear distinction of the fraction of inorganic P (Pi) derived from glyphosate, about half of which was then rapidly taken up and recycled by soil microorganisms. Our results provide the first evidence of the preferential utilization of glyphosate-derived Pi by microorganisms in the soil-water system. The rapid cycling of Pi derived from this disregarded source has important implications on nutrient management as well as water quality.

Microbial Turnover of Glyphosate to Biomass: Utilization as Nutrient Source and Formation of AMPA and Biogenic NER in an OECD 308 Test

Environmental fate assessment of chemicals involves standardized simulation tests with isotope-labeled molecules to balance transformation, mineralization, and formation of nonextractable residues (NER). Methods to predict microbial turnover and biogenic NER have been developed, having limited use when metabolites accumulate, the chemicals are not the only C source, or provide for other macroelements. To improve predictive capability, we extended a recently developed method for microbial growth yield estimation to account for incomplete degradation and multiple-element assimilation and combined it with a dynamic model for fate description in soils and sediments. We evaluated the results against the unique experimental data of 13C3-15N co-labeled glyphosate turnover with AMPA formation in water-sediment systems (OECD 308). Balancing 13C- and 15N- fluxes to biomass showed a pronounced shift of glyphosate transformation from full mineralization to AMPA formation. This may be explained by various hypotheses, for example, the limited substrate turnover inherent to the batch conditions of the test system causing microbial starvation or inhibition by P release. Modeling results indicate initial N overload due to the lower C/N ratio in glyphosate compared to average cell composition leading to subsequent C demand and accumulation of AMPA.

DNA-Functionalized Nanoceria for Probing Oxidation of Phosphorus Compounds

Chemical reactions without an obvious optical signal change, such as fluorescence or color, are difficult to monitor. Often, more advanced analytical techniques such as high-performance liquid chromatography and mass spectroscopy are needed. It would be useful to convert such reactions to those with changes in optical signals. In this work, we demonstrate that fluorescently labeled DNA oligonucleotides adsorbed on nanomaterials can probe such reactions, and oxidation of phosphorus-containing species was used as an example. Various metal oxides were tested, and CeO2 nanoparticles were found to be the most efficient for this purpose. Among phosphate, phosphite, and hypophosphite, only phosphate produced a large signal, indicating its strongest adsorption on CeO2 to displace the DNA. This was further used to screen oxidation agents to convert lower oxidation-state compounds to phosphate, and bleach was found to be able to oxidize phosphite. Canonical discriminant analysis was performed to discriminate various phosphorus species using a sensor array containing different metal oxides. On the basis of this, glyphosate was studied for its adsorption and oxidation. Although this method is not specific enough for selective biosensors, it is useful as a tool to produce sensitive optical signals to follow important chemical transformations.

On the degradation pathway of glyphosate and glycine

The degradation in water of the most widespread herbicide, glyphosate, is still under debate. Experimental disagreements on this process exist and there are only a few theoretical studies to support any conclusions. Moreover, the relationship between glyphosate and glycine is underestimated. Besides the structural similarity, glycine is a product of glyphosate degradation; hence, their studies are complementary. In this study, two mechanisms for the decomposition of the glyphosate molecule and glycine molecule in water are proposed. These mechanisms were explored by using quantum mechanical calculations. A combined microsolvation/PCM approach was employed to find and characterize their transition states, by which the reaction pathways were determined via the IRC method. The results have shown that the degradation processes might occur via a C-C bond cleavage, through a concerted mechanism, whereby the proton transfers and the CO2 detachments occur simultaneously. The second mechanism had two consecutive steps, a decarboxylation followed by the proton transfers. The water molecules served as a conduit for the proton transfers, away from the amine group (or the phosphonate, glyphosate case). Their function was to assist the reactions in a water-mediated decarboxylation. In these particular cases, the free energy of activation was 42.68 and 42.28 kcal mol-1 for the glycine structure and the glyphosate structure, respectively. These results agreed with the photodegradation and thermodegradation of glyphosate, as well as with the spontaneous decarboxylation of glycine. A concerted mechanism might be expected to yield C-P and C-N bond cleavages in the glyphosate molecule.