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González AG, Poitrasson F, Jiménez-Villacorta F, Shirokova LS, Pokrovsky OS. Contrasted redox-dependent structural control on Fe isotope fractionation during its adsorption onto and assimilation by heterotrophic soil bacteria. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2024; 26:344-356. [PMID: 38169006 DOI: 10.1039/d3em00332a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2024]
Abstract
Despite the importance of structural control on metal stable isotope fractionation in inorganic and abiotic systems, the link between metal structural changes and related isotopic fractionation during reactions with organic surfaces and live cells remains poorly established. We conducted reversible adsorption of Fe(II) and Fe(III) on the surface of exopolysaccharide (EPS)-rich and EPS-poor Pseudomonas aureofaciens, and we allowed Fe intracellular uptake by growing cells. We analyzed the Fe isotopic composition of the remaining fluid and cell biomass, and compared the isotopic fractionation during adsorption and assimilation reaction with relative changes in Fe structural status between aqueous solution and bacterial cells, based on available and newly collected X-ray absorption spectroscopy (XAS) observations. Iron(III) adsorption onto P. aureofaciens at 2.8 ≤ pH ≤ 6.0 produced an enrichment of the cell surface in heavier isotopes with Δ57Fecell-solution ranging from +0.7 to +2.1‰, without a link to pH in EPS-rich cultures. In contrast, the magnitude of isotopic fractionation increased with pH in EPS-poor cultures. Iron(II) adsorption produced an even larger enrichment of the cell surface in heavier isotopes, by up to 3.2‰, tentatively linked to Fe(III) hydroxide precipitation. Intracellular assimilation of Fe(II) favored heavier isotopes and led to Δ57Fecell-solution of +0.8‰. In addition, Fe(III) cellular uptake produced an enrichment of the bacterial biomass in lighter isotopes with Δ57Fecell-solution of -1‰. The XAS analyses demonstrated the dominance of Fe(III)-phosphate complexes both at the cell surface and in the cell interior. We suggest that heavier isotope enrichment of the cell surface relative to the aqueous solution is due to strong Fe(III)-phosphoryl surface complexes and Fe complexation to ligands responsible for metal transfer from the surface to the inner cell. In case of Fe(II) adsorption or assimilation, its partial oxidation within the cell compartments may lead to cell enrichment in heavier isotopes. In contrast, loss of symmetry of assimilated Fe(III) relative to the aqueous Fe3+ ion and longer bonds of intracellular ions relative to aqueous Fe(III)-citrate or hydroxo-complexes could produce an enrichment of cells in lighter isotopes. The versatile nature of Fe(II) and Fe(III) fractionation without a distinct effect of pH and surface exopolysaccharide coverage suggests that, in natural soil and sedimentary environments, Fe isotope fractionation during interaction with heterotrophic bacteria will be primarily governed by Fe complexation with DOM and Fe redox status in the soil pore water.
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Affiliation(s)
- Aridane G González
- Instituto de Oceanografía y Cambio Global, IOCAG, Universidad de Las Palmas de Gran Canaria, ULPGC, Spain.
| | - Franck Poitrasson
- Géosciences Environnement Toulouse (GET), CNRS UMR 5563, UPS-IRD-CNES 14-16, Avenue Edouard Belin, 31400, Toulouse, France
| | | | - Liudmila S Shirokova
- Géosciences Environnement Toulouse (GET), CNRS UMR 5563, UPS-IRD-CNES 14-16, Avenue Edouard Belin, 31400, Toulouse, France
- N.P. Laverov Federal Center for Integrated Arctic Research (FCIArctic), Russian Academy of Sciences, Arkhangelsk, Russia
| | - Oleg S Pokrovsky
- Géosciences Environnement Toulouse (GET), CNRS UMR 5563, UPS-IRD-CNES 14-16, Avenue Edouard Belin, 31400, Toulouse, France
- BIO-GEO-CLIM Laboratory, National Research Tomsk State University, Tomsk, Russia
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Bao T, Wang P, Hu B, Wang X, Qian J. Mobilization of colloids during sediment resuspension and its effect on the release of heavy metals and dissolved organic matter. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 861:160678. [PMID: 36481153 DOI: 10.1016/j.scitotenv.2022.160678] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2022] [Revised: 11/27/2022] [Accepted: 11/30/2022] [Indexed: 06/17/2023]
Abstract
Natural colloids are important in mobilizing pollutants in aquatic environments. This study investigated the mobilization and aggregation of natural colloids during the sediment resuspension and re-sedimentation processes using nanoparticle tracking analysis. The metals and organic matter in overlying water were divided and examined in dissolved (<0.45 μm), colloidal (3 kDa - 0.45 μm), and truly dissolved (<3 kDa) forms. Excitation emission matrix-parallel factor analysis (EEM-PARAFAC) was used to characterize the dissolved organic matter (DOM). In overlying water, most natural colloids were < 200 nm before resuspension. An evident mobilization of colloids and an increase in colloid size were observed during resuspension. The formation of particles (>0.45 μm) and decreases of small colloids (<200 nm) indicated that resuspension promoted the aggregation of colloids. Mobilization of colloids was accompanied by increases in concentrations of Fe, Al, and organic carbon in colloidal fractions, which could be related to the formation of mineral-organic complexes under an oxic environment. The release of DOM from sediments mainly contributed to the truly dissolved humic-like fraction, and colloidal organic carbon accounted for, on average, 20 % of the total dissolved organic carbon (DOC). Fe and Al had the highest colloidal proportions as they are major compositions of inorganic colloids. Substantial removal of dissolved Al, Fe, Pb, and Zn occurred when colloids aggregated in the overlying water. Although the adsorption of suspended particles may also decrease the concentrations of dissolved metals, the increased proportions of colloidal metals indicated a possible role of colloids in this process. These findings provide insight into the behavior of colloids during the resuspension process and indicate that the aggregation of colloids could promote the removal of dissolved matter.
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Affiliation(s)
- Tianli Bao
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Hohai University, Nanjing 210098, China
| | - Peifang Wang
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Hohai University, Nanjing 210098, China.
| | - Bin Hu
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Hohai University, Nanjing 210098, China
| | - Xun Wang
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Hohai University, Nanjing 210098, China
| | - Jin Qian
- Ministry of Education Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Hohai University, Nanjing 210098, China
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Liu K, Schiff SL, Wu L, Molot LA, Venkiteswaran JJ, Paterson MJ, Elgood RJ, Tsuji JM, Neufeld JD. Large Fractionation in Iron Isotopes Implicates Metabolic Pathways for Iron Cycling in Boreal Shield Lakes. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022; 56:14840-14851. [PMID: 36162065 DOI: 10.1021/acs.est.2c04247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Stable Fe isotopes have only recently been measured in freshwater systems, mainly in meromictic lakes. Here we report the δ56Fe of dissolved, particulate, and sediment Fe in two small dimictic boreal shield headwater lakes: manipulated eutrophic Lake 227, with annual cyanobacterial blooms, and unmanipulated oligotrophic Lake 442. Within the lakes, the range in δ56Fe is large (ca. -0.9 to +1.8‰), spanning more than half the entire range of natural Earth surface samples. Two layers in the water column with distinctive δ56Fe of dissolved (dis) and particulate (spm) Fe were observed, despite differences in trophic states. In the epilimnia of both lakes, a large Δ56Fedis-spm fractionation of 0.4-1‰ between dissolved and particulate Fe was only observed during cyanobacterial blooms in Lake 227, possibly regulated by selective biological uptake of isotopically light Fe by cyanobacteria. In the anoxic layers in both lakes, upward flux from sediments dominates the dissolved Fe pool with an apparent Δ56Fedis-spm fractionation of -2.2 to -0.6‰. Large Δ56Fedis-spm and previously published metagenome sequence data suggest active Fe cycling processes in anoxic layers, such as microaerophilic Fe(II) oxidation or photoferrotrophy, could regulate biogeochemical cycling. Large fractionation of stable Fe isotopes in these lakes provides a potential tool to probe Fe cycling and the acquisition of Fe by cyanobacteria, with relevance for understanding biogeochemical cycling of Earth's early ferruginous oceans.
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Affiliation(s)
- Kai Liu
- Department of Earth and Environmental Sciences, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
- Water Institute, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
| | - Sherry L Schiff
- Department of Earth and Environmental Sciences, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
- Water Institute, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
| | - Lingling Wu
- Department of Earth and Environmental Sciences, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
- Water Institute, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
| | - Lewis A Molot
- Faculty of Environmental and Urban Change, York University, Toronto, Ontario M3J 1P3, Canada
| | - Jason J Venkiteswaran
- Department of Geography and Environmental Studies, Wilfrid Laurier University, Waterloo, Ontario N2L 3C5, Canada
| | | | - Richard J Elgood
- Department of Earth and Environmental Sciences, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
- Water Institute, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
| | - Jackson M Tsuji
- Department of Biology, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
| | - Josh D Neufeld
- Water Institute, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
- Department of Biology, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1
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Liu J, Ge X, Ding H, Yang S, Sun Y, Li Y, Ji X, Li Y, Lu A. Effect of Photoreduction of Semiconducting Iron Mineral-Goethite on Microbial Community in the Marine Euphotic Zone. Front Microbiol 2022; 13:846441. [PMID: 35479644 PMCID: PMC9037543 DOI: 10.3389/fmicb.2022.846441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Accepted: 03/15/2022] [Indexed: 11/14/2022] Open
Abstract
Marine euphotic zone is the pivotal region for interplay of light-mineral-microorganism and elements cycle, in which semiconducting minerals exist widely and iron-bearing goethite is a typical and widespread one. In this work, we have conducted in-depth researches on the effect of ferrous [Fe(II)] ions dissolved by photoreduction of goethite on microbial community structure and diversity. The mineral phase, structure and morphology of synthesized goethite were characterized by Raman, X-ray diffraction (XRD), energy disperse spectroscopy (EDS), environmental scanning electron microscope (ESEM), and atomic force microscope (AFM). Photoelectrochemical measurements tested photoelectric response and redox activity of goethite, having proved its significant property of photoelectric response with 44.11% increment of the average photocurrent density relative to the dark current density. The photoreduction experiments of goethite were conducted under light condition in simulated seawater. It has suggested the photoreduction of goethite could occur and Fe(III) was reduced to Fe(II). The dissolved Fe(II) from the photoreduction of goethite under light condition was nearly 11 times than that group without light after a 10-day reaction. Furthermore, results of microbial community sequencing analysis indicated that dissolved Fe(II) could affect the structure and regulate the decrease of microbial community diversity. The emergence of dominant bacteria associated with iron oxidation and transport protein has suggested their obvious selectivity and adaptability in the environment with adding dissolved Fe(II). This work revealed the photoreduction process of semiconducting goethite was remarkable, giving rise to a non-negligible dissolved Fe(II) and its selective effect on the structure, diversity, as well as the function of microbial community. This light-induced interaction between minerals and microorganisms may also further regulate correlative metabolic pathways of carbon cycle in the marine euphotic zone.
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Affiliation(s)
| | | | - Hongrui Ding
- Beijing Key Laboratory of Mineral Environmental Function, The Key Laboratory of Orogenic Belts and Crustal Evolution, School of Earth and Space Sciences, Peking University, Beijing, China
| | | | | | | | | | | | - Anhuai Lu
- Beijing Key Laboratory of Mineral Environmental Function, The Key Laboratory of Orogenic Belts and Crustal Evolution, School of Earth and Space Sciences, Peking University, Beijing, China
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Zhang L, Chen Z, Yang X, Lu D, Liu Q, Jiang G. [Recent advances in method development and application of multi-collector inductively coupled plasma mass spectrometry]. Se Pu 2021; 39:4-9. [PMID: 34227353 PMCID: PMC9274840 DOI: 10.3724/sp.j.1123.2020.07030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
稳定同位素分析是分析化学一项颇具前景的分支,通过精确测定物质的稳定同位素比值,可以追溯物质来源并探究其转化过程。高精度稳定同位素分析技术的进步依赖于新一代质谱仪的不断发展。其中,多接收器电感耦合等离子体质谱(MC-ICP-MS)是近年发展迅速的一种同位素组成测定工具。稳定同位素分析对样品基质十分敏感,复杂基质能严重干扰同位素测定的精密度和准确度。这对MC-ICP-MS的样品净化提出了极高要求,目前也是同位素分析领域的热点问题。该文聚焦于近年来MC-ICP-MS在样品净化及仪器联用方法方面的相关研究进展,并展望了MC-ICP-MS稳定同位素分析的应用前景。
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Affiliation(s)
- Luyao Zhang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.,College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100190, China
| | - Zigu Chen
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.,College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100190, China
| | - Xuezhi Yang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.,College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100190, China
| | - Dawei Lu
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Qian Liu
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.,College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100190, China
| | - Guibin Jiang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.,College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100190, China
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Hu B, Wang P, Bao T, Qian J, Wang X. Mechanisms of photochemical release of dissolved organic matter and iron from resuspended sediments. J Environ Sci (China) 2021; 104:288-295. [PMID: 33985732 DOI: 10.1016/j.jes.2020.12.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Revised: 12/01/2020] [Accepted: 12/01/2020] [Indexed: 06/12/2023]
Abstract
Photochemical reactions can alter the transformation of sedimentary organic matter into dissolved organic matter (DOM) and affect its ultimate fate in water ecosystems. In the present study, the photorelease of DOM and Fe from resuspended lake sediments was investigated under different O2 and NO3- concentration conditions to study the mechanisms of DOM and Fe photorelease. The amount of photoreleased Fe, which ranged from 0.22 to 0.70 μmol/L, was significantly linearly correlated with the amount of photoreleased DOM. O2 and NO3- could promote the photochemical release of DOM and Fe, especially during the initial 4 h irradiation. In general, the order of the photorelease rates of DOM and Fe under different conditions was as follows: NO3-/aerobic > aerobic ≈ NO3-/anaerobic > anaerobic. The photorelease rates of DOM and Fe were higher for the initial 4 hr irradiation than these for the subsequent 8 hr irradiation. The photorelease of DOM and Fe is thought to proceed via direct photodissolution and indirect processes. The relative contributions of indirect processes (>60%) was much greater than that of direct photodissolution (<40%). The photoproduced H2O2 under aerobic and anaerobic conditions indicated that hydroxyl radicals (•OH) are involved in the photorelease of DOM. Using •OH scavengers, it was found that 38.7%, 53.7%, and 77.6% of photoreleased DOM was attributed to •OH under anaerobic, aerobic, and NO3-/aerobic conditions, respectively. Our findings provide insights for understanding the mechanisms and the important role of •OH in the DOM and Fe photorelease from resuspended sediments.
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Affiliation(s)
- Bin Hu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, Hohai University, Nanjing 210098, China; College of Environment, Hohai University, Nanjing 201198, China
| | - Peifang Wang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, Hohai University, Nanjing 210098, China; College of Environment, Hohai University, Nanjing 201198, China.
| | - Tianli Bao
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, Hohai University, Nanjing 210098, China; College of Environment, Hohai University, Nanjing 201198, China
| | - Jin Qian
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, Hohai University, Nanjing 210098, China; College of Environment, Hohai University, Nanjing 201198, China
| | - Xun Wang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, Hohai University, Nanjing 210098, China; College of Environment, Hohai University, Nanjing 201198, China
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Danchin A. Isobiology: A Variational Principle for Exploring Synthetic Life. Chembiochem 2020; 21:1781-1792. [DOI: 10.1002/cbic.202000060] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Revised: 03/06/2020] [Indexed: 12/22/2022]
Affiliation(s)
- Antoine Danchin
- Stellate TherapeuticsInstitut Cochin 24 rue du Faubourg Saint-Jacques 75014 Paris France
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