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Reaction mechanisms relevant to the formation and utilization of [Ru(edta)(NO)] complexes in aqueous media. J Inorg Biochem 2021; 225:111595. [PMID: 34555599 DOI: 10.1016/j.jinorgbio.2021.111595] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Revised: 08/13/2021] [Accepted: 08/27/2021] [Indexed: 12/11/2022]
Abstract
The advancement of Ru(edta) complexes (edta4- = ethylenediamineteraacetate) mediated reactions, including NO generation and its utilization, has not been systematically reviewed to date. This review aims to report the research progress that has been made in exploring the application of Ru(edta) complexes in trapping and generation of NO. Furthermore, utilization of the potential of Ru(edta) complexes to mimic NO synthase and nitrite reductase activity, including thermodynamics and kinetics of NO binding to Ru(edta) complexes, their NO scavenging (in vitro), and antitumor activity will be discussed. Also, the role of [Ru(edta)(NO)] in mediating electrochemical reduction of nitrite, S-nitrosylation of biological thiols, and cross-talk between NO and H2S, will be covered. Reports on the NO-related chemistry of Fe(edta) complexes showing similar behavior are contextualized in this review for comparison purposes. The research contributions compiled herein will provide in-depth mechanistic knowledge for understanding the diverse routes pertaining to the formation of the [Ru(edta)(NO)] species, and its role in effecting the aforementioned reactions of biochemical significance.
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2
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Hosseininasab V, Bertke JA, Warren TH. Thionitrite and Perthionitrite in NO Signaling at Zinc. Angew Chem Int Ed Engl 2021; 60:21184-21188. [PMID: 34180116 DOI: 10.1002/anie.202104906] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Indexed: 12/30/2022]
Abstract
NO and H2 S serve as signaling molecules in biology with intertwined reactivity. HSNO and HSSNO with their conjugate bases - SNO and - SSNO form in the reaction of H2 S with NO as well as S-nitrosothiols (RSNO) and nitrite (NO2 - ) that serve as NO reservoirs. While HSNO and HSSNO are elusive, their conjugate bases form isolable zinc complexes Ph,Me TpZn(SNO) and Ph,Me TpZn(SSNO) supported by tris(pyrazolyl)borate ligands. Reaction of Na(15-C-5)SSNO with Ph,Me TpZn(ClO4 ) provides Ph,Me TpZn(SSNO) that undergoes S-atom removal by PEt3 to give Ph,Me TpZn(SNO) and S=PEt3 . Unexpectedly stable at room temperature, these Zn-SNO and Zn-SSNO complexes release NO upon heating. Ph,Me TpZn(SNO) and Ph,Me TpZn(SSNO) quickly react with acidic thiols such as C6 F5 SH to form N2 O and NO, respectively. Increasing the thiol basicity in p-substituted aromatic thiols 4-X ArSH in the reaction with Ph,Me TpZn(SNO) turns on competing S-nitrosation to form Ph,Me TpZn-SH and RSNO, the latter a known precursor for NO.
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Affiliation(s)
| | - Jeffery A Bertke
- Department of Chemistry, Georgetown University, Box 571227, Washington, DC, 20057-1227, USA
| | - Timothy H Warren
- Department of Chemistry, Georgetown University, Box 571227, Washington, DC, 20057-1227, USA
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3
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Hosseininasab V, Bertke JA, Warren TH. Thionitrite and Perthionitrite in NO Signaling at Zinc. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202104906] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
| | - Jeffery A. Bertke
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Timothy H. Warren
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
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4
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Hubbard CD, Chatterjee D, Oszajca M, Polaczek J, Impert O, Chrzanowska M, Katafias A, Puchta R, van Eldik R. Inorganic reaction mechanisms. A personal journey. Dalton Trans 2020; 49:4599-4659. [PMID: 32162632 DOI: 10.1039/c9dt04620h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
This review covers highlights of the work performed in the van Eldik group on inorganic reaction mechanisms over the past two decades in the form of a personal journey. Topics that are covered include, from NO to HNO chemistry, peroxide activation in model porphyrin and enzymatic systems, the wonder-world of RuIII(edta) chemistry, redox chemistry of Ru(iii) complexes, Ru(ii) polypyridyl complexes and their application, relevant physicochemical properties and reaction mechanisms in ionic liquids, and mechanistic insight from computational chemistry. In each of these sections, typical examples of mechanistic studies are presented in reference to related work reported in the literature.
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Affiliation(s)
- Colin D Hubbard
- Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Egerlandstr. 1, 91058 Erlangen, Germany.
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5
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Chatterjee D. Chemistry of Ru(edta) complexes relevant to oxidoreductase mimicking: a personal perspective. NEW J CHEM 2020. [DOI: 10.1039/d0nj04349d] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This article chronicles the enzyme mimicking chemistry of Ru(edta) complexes (edta4− = ethylenediaminetetraacetate) in regard to small molecule activation.
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Affiliation(s)
- Debabrata Chatterjee
- Vice-Chancellor's Research Group at Zoology Department
- University of Burdwan
- Burdwan
- India
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6
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Oszajca M, Chatterjee D, van Eldik R. Reaction of [RuIII(EDTA)(H2O/OH)]−/2− with bisulfide and persulfide in aqueous solution: kinetic and mechanistic studies. J COORD CHEM 2019. [DOI: 10.1080/00958972.2019.1677899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Maria Oszajca
- Faculty of Chemistry, Jagiellonian University, Kraków, Poland
| | - Debabrata Chatterjee
- Vice-Chancellor’s Research Group at Zoology Department, University of Burdwan, Burdwan, India
- Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Erlangen, Germany
| | - Rudi van Eldik
- Faculty of Chemistry, Jagiellonian University, Kraków, Poland
- Department of Chemistry and Pharmacy, University of Erlangen-Nuremberg, Erlangen, Germany
- Faculty of Chemistry, N. Copernicus University, Torun, Poland
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7
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Jordan AJ, Walde RK, Schultz KM, Bacsa J, Sadighi JP. Nitrosonium Reactivity of (NHC)Copper(I) Sulfide Complexes. Inorg Chem 2019; 58:9592-9596. [DOI: 10.1021/acs.inorgchem.9b01676] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Abraham J. Jordan
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332-0400, United States
| | - Rebecca K. Walde
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332-0400, United States
| | - Kelly M. Schultz
- Murdock Hall, Department of Chemistry, Linfield College, McMinnville, Oregon 97128, United States
| | - John Bacsa
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332-0400, United States
- X-ray Crystallography Center, Department of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, Georgia 30322, United States
| | - Joseph P. Sadighi
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332-0400, United States
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Abstract
Interactions between small inorganic molecules are fundamental to the understanding of basic reaction mechanisms and some of the initial processes of chemical evolution that preceded organic molecules and led to the origin of life. The kinetics of these processes are suitable for the fast generation of a variety of new chemical entities and the propagation of a cascade of chemical reactions, a property that is ideal for signaling purposes even in biological systems. NO and H2S are such molecules that are nowadays recognized as biological gasotransmitters involved in the regulation of physiological functions through protein modifications such as S-nitrosothiol, disulfide, and persulfide formations. In this Viewpoint, we review the current understanding of interactions of NO (and organic and metal nitrosyl species) with H2S, in both chemical and biochemical contexts. Through the formation of HNO, (H)SNO (and its isomers), (H)SSNO, and polysulfides, these two gasotransmitters initiate reaction networks with significant roles in cell signaling. The chemical reactivities and biological effects of these nitrogen and sulfur species are still unresolved, and, thus, a cross-talk between all of them represents a challenging interdisciplinary field that awaits exciting new findings. We tackle some of the intriguing and open questions and provide perspectives for future research directions.
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Affiliation(s)
- Ivana Ivanovic-Burmazovic
- Department of Chemistry and Pharmacy , Friedrich-Alexander University (FAU) Erlangen-Nuremberg , 91054 Erlangen , Germany
| | - Milos R Filipovic
- Université de Bordeaux, IBGC, UMR 5095 , F-33077 Bordeaux , France.,CNRS, IBGC, UMR 5095 , F-33077 Bordeaux , France
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Chatterjee D, Chowdhury C, Datta A, van Eldik R. RuIII(edta)-mediated interaction of nitrite and sulphide: formation of an N-bonded thionitrous acid (HSNO) complex of RuIII(edta) in aqueous solution. NEW J CHEM 2019. [DOI: 10.1039/c9nj04074a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
It is reported for the first time that [RuIII(edta)(NO+)] (edta4− = ethylenediaminetetraacetate) generated from [RuIII(edta)(NO2)]2− at lower pH (∼3.5) can react with NaHS to form the thionitrous acid bound Ru(edta) complex in aqueous solution.
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Affiliation(s)
- Debabrata Chatterjee
- Vice-Chancellor's Research Group at Zoology Department
- University of Burdwan
- Burdwan-713104
- India
- Department of Chemistry and Pharmacy
| | - Chandra Chowdhury
- School of Chemical Sciences
- Indian Association for the Cultivation of Science
- Kolkata-700032
- India
| | - Ayan Datta
- School of Chemical Sciences
- Indian Association for the Cultivation of Science
- Kolkata-700032
- India
| | - Rudi van Eldik
- Department of Chemistry and Pharmacy
- University of Erlangen-Nuremberg
- 91058 Erlangen
- Germany
- Faculty of Chemistry
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Filipovic MR, Zivanovic J, Alvarez B, Banerjee R. Chemical Biology of H 2S Signaling through Persulfidation. Chem Rev 2018; 118:1253-1337. [PMID: 29112440 PMCID: PMC6029264 DOI: 10.1021/acs.chemrev.7b00205] [Citation(s) in RCA: 599] [Impact Index Per Article: 99.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Signaling by H2S is proposed to occur via persulfidation, a posttranslational modification of cysteine residues (RSH) to persulfides (RSSH). Persulfidation provides a framework for understanding the physiological and pharmacological effects of H2S. Due to the inherent instability of persulfides, their chemistry is understudied. In this review, we discuss the biologically relevant chemistry of H2S and the enzymatic routes for its production and oxidation. We cover the chemical biology of persulfides and the chemical probes for detecting them. We conclude by discussing the roles ascribed to protein persulfidation in cell signaling pathways.
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Affiliation(s)
- Milos R. Filipovic
- Univeristy of Bordeaux, IBGC, UMR 5095, F-33077 Bordeaux, France
- CNRS, IBGC, UMR 5095, F-33077 Bordeaux, France
| | - Jasmina Zivanovic
- Univeristy of Bordeaux, IBGC, UMR 5095, F-33077 Bordeaux, France
- CNRS, IBGC, UMR 5095, F-33077 Bordeaux, France
| | - Beatriz Alvarez
- Laboratorio de Enzimología, Facultad de Ciencias and Center for Free Radical and Biomedical Research, Universidad de la Republica, 11400 Montevideo, Uruguay
| | - Ruma Banerjee
- Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, Michigan 48109-0600, United States
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Chatterjee D, van Eldik R. RuIII(EDTA) mediated activation of redox signalling molecules. Coord Chem Rev 2017. [DOI: 10.1016/j.ccr.2017.08.024] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Wedmann R, Ivanovic-Burmazovic I, Filipovic MR. Nitrosopersulfide (SSNO -) decomposes in the presence of sulfide, cyanide or glutathione to give HSNO/SNO -: consequences for the assumed role in cell signalling. Interface Focus 2017; 7:20160139. [PMID: 28382204 DOI: 10.1098/rsfs.2016.0139] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
The emergence of hydrogen sulfide (H2S) as a new signalling molecule able to control vasodilation, neurotransmission and immune response, prompted questions about its possible cross-talk with the other gasontransmitter, nitric oxide (NO). It has been shown that H2S reacts with NO and its metabolites and several potentially biologically active species have been identified. Thionitrous acid (HSNO) was proposed to be an intermediate product of the reaction of S-nitrosothiols with H2S capable of crossing the membranes and causing further trans-nitrosation of proteins. Alternatively, formation of nitrosopersulfide (SSNO-) has been proposed in this reaction. SSNO- was claimed to be particularly stable and inert to H2S, thiols and cyanides. It is suggested that this putative SSNO- slowly decomposes to give NO, HNO and polysulfides. However, the chemical studies with pure SSNO- salts showed some conflicting observations. In this study, we work with pure PNP+SSNO- to show that contrary to everything that is claimed for the yellow reaction product of GSNO with H2S, pure SSNO- decomposes readily in the presence of cyanide, H2S and glutathione to form SNO-. Based on literature overview and chemical data about the structures of HSNO/SNO- and SSNO- we discuss the biological role these two species could have.
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Affiliation(s)
- Rudolf Wedmann
- Department of Chemistry and Pharmacy , Friedrich-Alexander University of Erlangen-Nuremberg , 91058 Erlangen , Germany
| | - Ivana Ivanovic-Burmazovic
- Department of Chemistry and Pharmacy , Friedrich-Alexander University of Erlangen-Nuremberg , 91058 Erlangen , Germany
| | - Milos R Filipovic
- University of Bordeaux, IBGC, UMR 5095, 33077 Bordeaux, France; CNRS, IBGC, UMR 5095, 33077 Bordeaux, France
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13
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Sarkar P, Saha A, Chatterjee D. [RuIII(EDTA)(H2O)]− catalyzed oxidation of biologically important thiols by H2O2. J COORD CHEM 2016. [DOI: 10.1080/00958972.2016.1229477] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Papiya Sarkar
- Chemistry & Biomimetics Group, CSIR-Central Mechanical Engineering Research Institute, Durgapur, India
| | - Amrita Saha
- Chemistry & Biomimetics Group, CSIR-Central Mechanical Engineering Research Institute, Durgapur, India
| | - Debabrata Chatterjee
- Chemistry & Biomimetics Group, CSIR-Central Mechanical Engineering Research Institute, Durgapur, India
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