1
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Souza Mattos R, Mukherjee S, Barbatti M. Legion: A Platform for Gaussian Wavepacket Nonadiabatic Dynamics. J Chem Theory Comput 2025; 21:2189-2205. [PMID: 40025765 PMCID: PMC11948330 DOI: 10.1021/acs.jctc.4c01697] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2024] [Revised: 02/18/2025] [Accepted: 02/19/2025] [Indexed: 03/04/2025]
Abstract
Nonadiabatic molecular dynamics is crucial in investigating the time evolution of excited states in molecular systems. Among the various methods for performing such dynamics, those employing frozen Gaussian wavepacket propagation, particularly the multiple spawning approach, offer a favorable balance between computational cost and reliability. It propagates on-the-fly trajectories used to build and propagate the nuclear wavepacket. Despite its potential, efficient, flexible, and easily accessible software for Gaussian wavepacket propagation is less common compared to other methods, such as surface hopping. To address this, we present Legion, a software that facilitates the development and application of classical-trajectory-guided quantum wavepacket methods. The version presented here already contains a highly flexible and fully functional ab initio multiple spawning implementation, with different strategies to improve efficiency. Legion is written in Python for data management and NumPy/Fortran for numerical operations. It is created under the umbrella of the Newton-X platform and inherits all of its electronic structure interfaces beyond other direct interfaces. It also contains new approximations that allow it to circumvent the computation of the nonadiabatic coupling, extending the electronic structure methods that can be used for multiple spawning dynamics. We test, validate, and demonstrate Legion's functionalities through multiple spawning dynamics of fulvene (CASSCF and CASPT2) and DMABN (TDDFT).
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Affiliation(s)
| | - Saikat Mukherjee
- Aix
Marseille University, CNRS, ICR, Marseille 13397, France
- Faculty
of Chemistry, Nicolaus Copernicus University
in Torun, Torun 87100, Poland
| | - Mario Barbatti
- Aix
Marseille University, CNRS, ICR, Marseille 13397, France
- Institut
Universitaire de France, Paris 75231, France
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2
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Karmakar S, Thakur S, Jain A. Can classical mechanics sense conical intersection? J Chem Phys 2024; 160:124110. [PMID: 38526110 DOI: 10.1063/5.0197381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Accepted: 03/05/2024] [Indexed: 03/26/2024] Open
Abstract
Conical intersection (CI) leads to fast electronic energy transfer. However, Hamm and Stock [Phys. Rev. Lett. 109, 173201 (2012)] showed the existence of a vibrational CI and its role in vibrational energy relaxation. In this paper, we further investigate the vibrational energy relaxation using an isolated model Hamiltonian system of four vibrational modes with two distinctively different timescales (two fast modes and two slow modes). We show that the excitation of the slow modes plays a crucial role in the energy relaxation mechanism. We also analyze the system from a mixed quantum-classical (surface hopping method) and a completely classical point of view. Notably, surface hopping and even classical simulations also capture fast energy relaxation, which is a signature of CI's existence.
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Affiliation(s)
- Sourav Karmakar
- Department of Chemistry, Indian Institute of Technology Bombay, Bombay, India
| | - Saumya Thakur
- Department of Chemistry, Indian Institute of Technology Bombay, Bombay, India
| | - Amber Jain
- Department of Chemistry, Indian Institute of Technology Bombay, Bombay, India
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3
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Wu Y, Rawlinson J, Littlejohn RG, Subotnik JE. Linear and angular momentum conservation in surface hopping methods. J Chem Phys 2024; 160:024119. [PMID: 38205852 DOI: 10.1063/5.0179599] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Accepted: 11/29/2023] [Indexed: 01/12/2024] Open
Abstract
We demonstrate that, for systems with spin-orbit coupling and an odd number of electrons, the standard fewest switches surface hopping algorithm does not conserve the total linear or angular momentum. This lack of conservation arises not so much from the hopping direction (which is easily adjusted) but more generally from propagating adiabatic dynamics along surfaces that are not time reversible. We show that one solution to this problem is to run along eigenvalues of phase-space electronic Hamiltonians H(R, P) (i.e., electronic Hamiltonians that depend on both nuclear position and momentum) with an electronic-nuclear coupling Γ · P [see Eq. (25)], and we delineate the conditions that must be satisfied by the operator Γ. The present results should be extremely useful as far as developing new semiclassical approaches that can treat systems where the nuclear, electronic orbital, and electronic spin degrees of freedom altogether are all coupled together, hopefully including systems displaying the chiral-induced spin selectivity effect.
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Affiliation(s)
- Yanze Wu
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Jonathan Rawlinson
- Department of Mathematics, University of Manchester, Manchester M13 9PL, United Kingdom
| | - Robert G Littlejohn
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - Joseph E Subotnik
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
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4
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Abstract
The topological properties of an object, associated with an integer called the topological invariant, are global features that cannot change continuously but only through abrupt variations, hence granting them intrinsic robustness. Engineered metamaterials (MMs) can be tailored to support highly nontrivial topological properties of their band structure, relative to their electronic, electromagnetic, acoustic and mechanical response, representing one of the major breakthroughs in physics over the past decade. Here, we review the foundations and the latest advances of topological photonic and phononic MMs, whose nontrivial wave interactions have become of great interest to a broad range of science disciplines, such as classical and quantum chemistry. We first introduce the basic concepts, including the notion of topological charge and geometric phase. We then discuss the topology of natural electronic materials, before reviewing their photonic/phononic topological MM analogues, including 2D topological MMs with and without time-reversal symmetry, Floquet topological insulators, 3D, higher-order, non-Hermitian and nonlinear topological MMs. We also discuss the topological aspects of scattering anomalies, chemical reactions and polaritons. This work aims at connecting the recent advances of topological concepts throughout a broad range of scientific areas and it highlights opportunities offered by topological MMs for the chemistry community and beyond.
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Affiliation(s)
- Xiang Ni
- Photonics Initiative, Advanced Science Research Center, City University of New York, New York, New York 10031, United States
- School of Physics and Electronics, Central South University, Changsha, Hunan 410083, China
| | - Simon Yves
- Photonics Initiative, Advanced Science Research Center, City University of New York, New York, New York 10031, United States
| | - Alex Krasnok
- Department of Electrical and Computer Engineering, Florida International University, Miami, Florida 33174, USA
| | - Andrea Alù
- Photonics Initiative, Advanced Science Research Center, City University of New York, New York, New York 10031, United States
- Department of Electrical Engineering, City College, The City University of New York, 160 Convent Avenue, New York, New York 10031, United States
- Physics Program, The Graduate Center, The City University of New York, 365 Fifth Avenue, New York, New York 10016, United States
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5
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Rivlin T, Pollak E. Nonadiabatic Couplings Can Speed Up Quantum Tunneling Transition Path Times. J Phys Chem Lett 2022; 13:10558-10566. [PMID: 36342976 PMCID: PMC9677498 DOI: 10.1021/acs.jpclett.2c03008] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2022] [Accepted: 11/02/2022] [Indexed: 06/16/2023]
Abstract
Quantum tunneling is known to play an important role in the dynamics of systems with nonadiabatic couplings. However, until recently, the time-domain properties of nonadiabatic scattering have been severely under-explored. Using numerically exact quantum methods, we study the impact that nonadiabatic couplings have on the time it takes to tunnel through a barrier. We find that the Wigner phase time is the appropriate measure to use when determining the tunneling flight time also when considering nonadiabatic systems. The central result of the present study is that in an avoided crossing system in one dimension, the nonadiabatic couplings speed up the tunneling event, relative to the adiabatic case in which all nonadiabatic coupling is ignored. This has implications for both the study of quantum tunneling times and for the field of nonadiabatic scattering and chemistry.
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6
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He X, Wu B, Rivlin T, Liu J, Pollak E. Transition Path Flight Times and Nonadiabatic Electronic Transitions. J Phys Chem Lett 2022; 13:6966-6974. [PMID: 35877977 PMCID: PMC9358656 DOI: 10.1021/acs.jpclett.2c01425] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Accepted: 07/18/2022] [Indexed: 06/15/2023]
Abstract
Transition path flight times are studied for scattering on two electronic surfaces with a single crossing. These flight times reveal nontrivial quantum effects such as resonance lifetimes and nonclassical passage times and reveal that nonadiabatic effects often increase flight times. The flight times are computed using numerically exact time propagation and compared with results obtained from the Fewest Switches Surface Hopping (FSSH) method. Comparison of the two methods shows that the FSSH method is reliable for transition path times only when the scattering is classically allowed on the relevant adiabatic surfaces. However, where quantum effects such as tunneling and resonances dominate, the FSSH method is not adequate to accurately predict the correct times and transition probabilities. These results highlight limitations in methods which do not account for quantum interference effects, and suggest that measuring flight times is important for obtaining insights from the time-domain into quantum effects in nonadiabatic scattering.
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Affiliation(s)
- Xin He
- Beijing
National Laboratory for Molecular Sciences, Institute of Theoretical
and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Baihua Wu
- Beijing
National Laboratory for Molecular Sciences, Institute of Theoretical
and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Tom Rivlin
- Chemical
and Biological Physics Department, Weizmann
Institute of Science, 76100 Rehovot, Israel
| | - Jian Liu
- Beijing
National Laboratory for Molecular Sciences, Institute of Theoretical
and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Eli Pollak
- Chemical
and Biological Physics Department, Weizmann
Institute of Science, 76100 Rehovot, Israel
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7
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Chandran SS, Wu Y, Teh HH, Waldeck DH, Subotnik JE. Electron transfer and spin-orbit coupling: Can nuclear motion lead to spin selective rates? J Chem Phys 2022; 156:174113. [PMID: 35525658 DOI: 10.1063/5.0086554] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We investigate a spin-boson inspired model of electron transfer, where the diabatic coupling is given by a position-dependent phase, eiWx. We consider both equilibrium and nonequilibrium initial conditions. We show that, for this model, all equilibrium results are completely invariant to the sign of W (to infinite order). However, the nonequilibrium results do depend on the sign of W, suggesting that photo-induced electron transfer dynamics with spin-orbit coupling can exhibit electronic spin polarization (at least for some time).
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Affiliation(s)
- Suraj S Chandran
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Yanze Wu
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Hung-Hsuan Teh
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - David H Waldeck
- Department of Chemistry, University of Pittsburgh, Pennsylvania 15260, USA
| | - Joseph E Subotnik
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
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8
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Shu Y, Varga Z, Kanchanakungwankul S, Zhang L, Truhlar DG. Diabatic States of Molecules. J Phys Chem A 2022; 126:992-1018. [PMID: 35138102 DOI: 10.1021/acs.jpca.1c10583] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Quantitative simulations of electronically nonadiabatic molecular processes require both accurate dynamics algorithms and accurate electronic structure information. Direct semiclassical nonadiabatic dynamics is expensive due to the high cost of electronic structure calculations, and hence it is limited to small systems, limited ensemble averaging, ultrafast processes, and/or electronic structure methods that are only semiquantitatively accurate. The cost of dynamics calculations can be made manageable if analytic fits are made to the electronic structure data, and such fits are most conveniently carried out in a diabatic representation because the surfaces are smooth and the couplings between states are smooth scalar functions. Diabatic representations, unlike the adiabatic ones produced by most electronic structure methods, are not unique, and finding suitable diabatic representations often involves time-consuming nonsystematic diabatization steps. The biggest drawback of using diabatic bases is that it can require large amounts of effort to perform a globally consistent diabatization, and one of our goals has been to develop methods to do this efficiently and automatically. In this Feature Article, we introduce the mathematical framework of diabatic representations, and we discuss diabatization methods, including adiabatic-to-diabatic transformations and recent progress toward the goal of automatization.
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Affiliation(s)
- Yinan Shu
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Zoltan Varga
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Siriluk Kanchanakungwankul
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Linyao Zhang
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States.,School of Energy Science and Engineering, Harbin Institute of Technology, Harbin 150001, P. R. China
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
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9
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Ibele LM, Curchod BFE. Dynamics near a conical intersection-A diabolical compromise for the approximations of ab initio multiple spawning. J Chem Phys 2021; 155:174119. [PMID: 34742188 DOI: 10.1063/5.0071376] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Full multiple spawning (FMS) offers an exciting framework for the development of strategies to simulate the excited-state dynamics of molecular systems. FMS proposes to depict the dynamics of nuclear wavepackets by using a growing set of traveling multidimensional Gaussian functions called trajectory basis functions (TBFs). Perhaps the most recognized method emanating from FMS is the so-called ab initio multiple spawning (AIMS). In AIMS, the couplings between TBFs-in principle exact in FMS-are approximated to allow for the on-the-fly evaluation of required electronic-structure quantities. In addition, AIMS proposes to neglect the so-called second-order nonadiabatic couplings and the diagonal Born-Oppenheimer corrections. While AIMS has been applied successfully to simulate the nonadiabatic dynamics of numerous complex molecules, the direct influence of these missing or approximated terms on the nonadiabatic dynamics when approaching and crossing a conical intersection remains unknown to date. It is also unclear how AIMS could incorporate geometric-phase effects in the vicinity of a conical intersection. In this work, we assess the performance of AIMS in describing the nonadiabatic dynamics through a conical intersection for three two-dimensional, two-state systems that mimic the excited-state dynamics of bis(methylene)adamantyl, butatriene cation, and pyrazine. The population traces and nuclear density dynamics are compared with numerically exact quantum dynamics and trajectory surface hopping results. We find that AIMS offers a qualitatively correct description of the dynamics through a conical intersection for the three model systems. However, any attempt at improving the AIMS results by accounting for the originally neglected second-order nonadiabatic contributions appears to be stymied by the hermiticity requirement of the AIMS Hamiltonian and the independent first-generation approximation.
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Affiliation(s)
- Lea M Ibele
- Department of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom
| | - Basile F E Curchod
- Department of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom
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10
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Choi S, Vaníček J. High-order geometric integrators for representation-free Ehrenfest dynamics. J Chem Phys 2021; 155:124104. [PMID: 34598577 DOI: 10.1063/5.0061878] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Ehrenfest dynamics is a useful approximation for ab initio mixed quantum-classical molecular dynamics that can treat electronically nonadiabatic effects. Although a severe approximation to the exact solution of the molecular time-dependent Schrödinger equation, Ehrenfest dynamics is symplectic, is time-reversible, and conserves exactly the total molecular energy as well as the norm of the electronic wavefunction. Here, we surpass apparent complications due to the coupling of classical nuclear and quantum electronic motions and present efficient geometric integrators for "representation-free" Ehrenfest dynamics, which do not rely on a diabatic or adiabatic representation of electronic states and are of arbitrary even orders of accuracy in the time step. These numerical integrators, obtained by symmetrically composing the second-order splitting method and exactly solving the kinetic and potential propagation steps, are norm-conserving, symplectic, and time-reversible regardless of the time step used. Using a nonadiabatic simulation in the region of a conical intersection as an example, we demonstrate that these integrators preserve the geometric properties exactly and, if highly accurate solutions are desired, can be even more efficient than the most popular non-geometric integrators.
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Affiliation(s)
- Seonghoon Choi
- Laboratory of Theoretical Physical Chemistry, Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - Jiří Vaníček
- Laboratory of Theoretical Physical Chemistry, Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
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11
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Westermayr J, Marquetand P. Machine Learning for Electronically Excited States of Molecules. Chem Rev 2021; 121:9873-9926. [PMID: 33211478 PMCID: PMC8391943 DOI: 10.1021/acs.chemrev.0c00749] [Citation(s) in RCA: 191] [Impact Index Per Article: 47.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Indexed: 12/11/2022]
Abstract
Electronically excited states of molecules are at the heart of photochemistry, photophysics, as well as photobiology and also play a role in material science. Their theoretical description requires highly accurate quantum chemical calculations, which are computationally expensive. In this review, we focus on not only how machine learning is employed to speed up such excited-state simulations but also how this branch of artificial intelligence can be used to advance this exciting research field in all its aspects. Discussed applications of machine learning for excited states include excited-state dynamics simulations, static calculations of absorption spectra, as well as many others. In order to put these studies into context, we discuss the promises and pitfalls of the involved machine learning techniques. Since the latter are mostly based on quantum chemistry calculations, we also provide a short introduction into excited-state electronic structure methods and approaches for nonadiabatic dynamics simulations and describe tricks and problems when using them in machine learning for excited states of molecules.
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Affiliation(s)
- Julia Westermayr
- Institute
of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Strasse 17, 1090 Vienna, Austria
| | - Philipp Marquetand
- Institute
of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Strasse 17, 1090 Vienna, Austria
- Vienna
Research Platform on Accelerating Photoreaction Discovery, University of Vienna, Währinger Strasse 17, 1090 Vienna, Austria
- Data
Science @ Uni Vienna, University of Vienna, Währinger Strasse 29, 1090 Vienna, Austria
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12
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Abstract
Electronically excited states of molecules are at the heart of photochemistry, photophysics, as well as photobiology and also play a role in material science. Their theoretical description requires highly accurate quantum chemical calculations, which are computationally expensive. In this review, we focus on not only how machine learning is employed to speed up such excited-state simulations but also how this branch of artificial intelligence can be used to advance this exciting research field in all its aspects. Discussed applications of machine learning for excited states include excited-state dynamics simulations, static calculations of absorption spectra, as well as many others. In order to put these studies into context, we discuss the promises and pitfalls of the involved machine learning techniques. Since the latter are mostly based on quantum chemistry calculations, we also provide a short introduction into excited-state electronic structure methods and approaches for nonadiabatic dynamics simulations and describe tricks and problems when using them in machine learning for excited states of molecules.
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Affiliation(s)
- Julia Westermayr
- Institute of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Strasse 17, 1090 Vienna, Austria
| | - Philipp Marquetand
- Institute of Theoretical Chemistry, Faculty of Chemistry, University of Vienna, Währinger Strasse 17, 1090 Vienna, Austria
- Vienna Research Platform on Accelerating Photoreaction Discovery, University of Vienna, Währinger Strasse 17, 1090 Vienna, Austria
- Data Science @ Uni Vienna, University of Vienna, Währinger Strasse 29, 1090 Vienna, Austria
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13
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Brown SE, Shakib FA. Recent progress in approximate quantum dynamics methods for the study of proton-coupled electron transfer reactions. Phys Chem Chem Phys 2021; 23:2535-2556. [PMID: 33367437 DOI: 10.1039/d0cp05166g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Proton-coupled electron transfer (PCET) reactions are ubiquitous natural processes at the heart of energy conversion reactions in photosynthesis and respiration, DNA repair, and diverse enzymatic reactions. Theoretical formulation and computational method developments have eyed modeling of thermal and photoinduced PCET for the last three decades. The accumulation of these studies, collected in dozens of reviews, accounts, and perspectives, has firmly established the influence of quantum effects, including non-adiabatic electronic transitions, vibrational relaxation, zero-point energy, and proton tunneling, on the rate and mechanism of PCET reactions. Here, we focus on some recently-developed methods, spanning the last eight years, that can quantitatively capture these effects in the PCET context and provide efficient means for their qualitative description in complex systems. The theoretical background of each method and their accuracy with respect to exact results are discussed and the results of relevant PCET simulations based on each method are presented.
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Affiliation(s)
- Sandra E Brown
- Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA 90095, USA
| | - Farnaz A Shakib
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, NJ 07102, USA.
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14
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Marsili E, Olivucci M, Lauvergnat D, Agostini F. Quantum and Quantum-Classical Studies of the Photoisomerization of a Retinal Chromophore Model. J Chem Theory Comput 2020; 16:6032-6048. [PMID: 32931266 DOI: 10.1021/acs.jctc.0c00679] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
We report an in-depth analysis of the photo-induced isomerization of the 2-cis-penta-2,4-dieniminium cation: a minimal model of the 11-cis retinal protonated Schiff base chromophore of the dim-light photoreceptor rhodopsin. Based on recently developed three-dimensional potentials parametrized on ab initio multi-state multi-configurational second-order perturbation theory data, we perform quantum-dynamical studies. In addition, simulations based on various quantum-classical methods, among which Tully surface hopping and the coupled-trajectory approach derived from the exact factorization, allow us to validate their performance against vibronic wavepacket propagation and, therefore, a purely quantum treatment. Quantum-dynamics results uncover qualitative differences with respect to the two-dimensional Hahn-Stock potentials, widely used as model potentials for the isomerization of the same chromophore, due to the increased dimensionality and three-mode correlation. Quantum-classical simulations show, instead, that three-dimensional model potentials are capable of capturing a number of features revealed by atomistic simulations and experimental observations. In particular, a recently reported vibrational phase relationship between double-bond torsion and hydrogen-out-of-plane modes critical for rhodopsin isomerization efficiency is correctly reproduced.
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Affiliation(s)
- Emanuele Marsili
- Université Paris-Saclay, CNRS, Institut de Chimie Physique UMR8000, Orsay 91405, France.,Department of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom
| | - Massimo Olivucci
- Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Via A. Moro 2, I-53100 Siena, Italy.,Department of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - David Lauvergnat
- Université Paris-Saclay, CNRS, Institut de Chimie Physique UMR8000, Orsay 91405, France
| | - Federica Agostini
- Université Paris-Saclay, CNRS, Institut de Chimie Physique UMR8000, Orsay 91405, France
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15
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Liu Y, Gao X, Lai Y, Mulvihill E, Geva E. Electronic Dynamics through Conical Intersections via Quasiclassical Mapping Hamiltonian Methods. J Chem Theory Comput 2020; 16:4479-4488. [DOI: 10.1021/acs.jctc.0c00177] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Yudan Liu
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Xing Gao
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Yifan Lai
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Ellen Mulvihill
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Eitan Geva
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
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16
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Guan Y, Yarkony DR. Accurate Neural Network Representation of the Ab Initio Determined Spin-Orbit Interaction in the Diabatic Representation Including the Effects of Conical Intersections. J Phys Chem Lett 2020; 11:1848-1858. [PMID: 32062966 DOI: 10.1021/acs.jpclett.0c00074] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
A method for fitting ab initio determined spin-orbit coupling interactions, in the Breit-Pauli approximation, based on quasidiabatic representations using neural network fits is reported. The algorithm generalizes our recently reported neural network approach for representing the dipole interaction. The S0, S1, and T1 states of formaldehyde are used as an example. First, the two singlet states S0 and S1 are diabatized with a modified Boys Localization diabatization method. Second, the spin-orbit coupling between singlet and triplet states is transformed to the diabatic representation. This removes the discontinuities in the adiabatic representation. The diabatized spin-orbit couplings are then fit with smooth neural network functions. The analytic representation of spin-orbit coupling interactions in a diabatic basis by neural networks will make accurate full-dimensional quantum dynamical treatment of both internal conversion and intersystem crossing possible, which will help us to gain better understanding of both processes.
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Affiliation(s)
- Yafu Guan
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - David R Yarkony
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
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17
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Guan Y, Guo H, Yarkony DR. Extending the Representation of Multistate Coupled Potential Energy Surfaces To Include Properties Operators Using Neural Networks: Application to the 1,21A States of Ammonia. J Chem Theory Comput 2019; 16:302-313. [DOI: 10.1021/acs.jctc.9b00898] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yafu Guan
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - David R. Yarkony
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
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18
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Subotnik J, Miao G, Bellonzi N, Teh HH, Dou W. A demonstration of consistency between the quantum classical Liouville equation and Berry’s phase and curvature for the case of complex Hamiltonians. J Chem Phys 2019; 151:074113. [DOI: 10.1063/1.5116210] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Joseph Subotnik
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Gaohan Miao
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Nicole Bellonzi
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Hung-Hsuan Teh
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6323, USA
| | - Wenjie Dou
- Department of Chemistry, University of California, Berkeley, California 94720, USA
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19
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Xie W, Sapunar M, Došlić N, Sala M, Domcke W. Assessing the performance of trajectory surface hopping methods: Ultrafast internal conversion in pyrazine. J Chem Phys 2019; 150:154119. [DOI: 10.1063/1.5084961] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Weiwei Xie
- Department of Chemistry, Technical University of Munich, Lichtenbergstr. 4, 85747 Garching, Germany
- Institute of Biological Interfaces (IBG-2), Karlsruhe Institute of Technology, 76131 Karlsruhe, Germany
- Institute of Physical Chemistry, Karlsruhe Institute of Technology, Kaiserstr. 12, 76131 Karlsruhe, Germany
| | - Marin Sapunar
- Department of Physical Chemistry, Ruđer Bošković Institute, HR-10000 Zagreb, Croatia
| | - Nađa Došlić
- Department of Physical Chemistry, Ruđer Bošković Institute, HR-10000 Zagreb, Croatia
| | - Matthieu Sala
- Laboratoire Interdisciplinaire Carnot de Bourgogne UMR 6303 CNRS, Université de Bourgogne, BP 47870, F-21078 Dijon, France and Institut für Physikalische Chemie, Christian-Albrechts-Universität zu Kiel, Olshausenstr. 40, D-24098 Kiel, Germany
| | - Wolfgang Domcke
- Department of Chemistry, Technical University of Munich, Lichtenbergstr. 4, 85747 Garching, Germany
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20
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Miao G, Bellonzi N, Subotnik J. An extension of the fewest switches surface hopping algorithm to complex Hamiltonians and photophysics in magnetic fields: Berry curvature and “magnetic” forces. J Chem Phys 2019; 150:124101. [DOI: 10.1063/1.5088770] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Gaohan Miao
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Nicole Bellonzi
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Joseph Subotnik
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
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21
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Yarkony DR, Xie C, Zhu X, Wang Y, Malbon CL, Guo H. Diabatic and adiabatic representations: Electronic structure caveats. COMPUT THEOR CHEM 2019. [DOI: 10.1016/j.comptc.2019.01.020] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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22
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Fedorov DA, Levine BG. A discontinuous basis enables numerically exact solution of the Schrödinger equation around conical intersections in the adiabatic representation. J Chem Phys 2019; 150:054102. [PMID: 30736673 DOI: 10.1063/1.5058268] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Solving the vibrational Schrödinger equation in the neighborhood of conical intersections in the adiabatic representation is a challenge. At the intersection point, first- and second-derivative nonadiabatic coupling matrix elements become singular, with the singularity in the second-derivative coupling (diagonal Born-Oppenheimer correction) being non-integrable. These singularities result from discontinuities in the vibronic functions associated with the individual adiabatic states, and our group has recently argued that these divergent matrix elements cancel when discontinuous adiabatic vibronic functions sum to a continuous total nonadiabatic wave function. Here we describe the realization of this concept: a novel scheme for the numerically exact solution of the Schrödinger equation in the adiabatic representation. Our approach is based on a basis containing functions that are discontinuous at the intersection point. We demonstrate that the individual adiabatic nuclear wave functions are themselves discontinuous at the intersection point. This proves that discontinuous basis functions are essential to any tractable method that solves the Schrödinger equation around conical intersections in the adiabatic representation with high numerical precision. We establish that our method provides numerically exact results by comparison to reference calculations performed in the diabatic representation. In addition, we quantify the energetic error associated with constraining the density to be zero at the intersection point, a natural approximation. Prospects for extending the present treatment of a two-dimensional model to systems of higher dimensionality are discussed.
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Affiliation(s)
- Dmitry A Fedorov
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, USA
| | - Benjamin G Levine
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, USA
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23
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Duan HG, Qi DL, Sun ZR, Miller RD, Thorwart M. Signature of the geometric phase in the wave packet dynamics on hypersurfaces. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.09.016] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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24
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Affiliation(s)
- Basile F. E. Curchod
- Department of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom
| | - Todd J. Martínez
- Department of Chemistry and PULSE Institute, Stanford University, Stanford, California 94305, United States
- SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
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25
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Li J, Joubert-Doriol L, Izmaylov AF. Geometric phase effects in excited state dynamics through a conical intersection in large molecules: N-dimensional linear vibronic coupling model study. J Chem Phys 2017; 147:064106. [DOI: 10.1063/1.4985925] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Jiaru Li
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
| | - Loïc Joubert-Doriol
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Artur F. Izmaylov
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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26
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Ryabinkin IG, Joubert-Doriol L, Izmaylov AF. Geometric Phase Effects in Nonadiabatic Dynamics near Conical Intersections. Acc Chem Res 2017; 50:1785-1793. [PMID: 28665584 DOI: 10.1021/acs.accounts.7b00220] [Citation(s) in RCA: 82] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Dynamical consideration that goes beyond the common Born-Oppenheimer approximation (BOA) becomes necessary when energy differences between electronic potential energy surfaces become small or vanish. One of the typical scenarios of the BOA breakdown in molecules beyond diatomics is a conical intersection (CI) of electronic potential energy surfaces. CIs provide an efficient mechanism for radiationless electronic transitions: acting as "funnels" for the nuclear wave function, they enable rapid conversion of the excessive electronic energy into the nuclear motion. In addition, CIs introduce nontrivial geometric phases (GPs) for both electronic and nuclear wave functions. These phases manifest themselves in change of the wave function signs if one considers an evolution of the system around the CI. This sign change is independent of the shape of the encircling contour and thus has a topological character. How these extra phases affect nonadiabatic dynamics is the main question that is addressed in this Account. We start by considering the simplest model providing the CI topology: two-dimensional two-state linear vibronic coupling model. Selecting this model instead of a real molecule has the advantage that various dynamical regimes can be easily modeled in the model by varying parameters, whereas any fixed molecule provides the system specific behavior that may not be very illustrative. After demonstrating when GP effects are important and how they modify the dynamics for two sets of initial conditions (starting from the ground and excited electronic states), we give examples of molecular systems where the described GP effects are crucial for adequate description of nonadiabatic dynamics. Interestingly, although the GP has a topological character, the extent to which accounting for GPs affect nuclear dynamics profoundly depends on topography of potential energy surfaces. Understanding an extent of changes introduced by the GP in chemical dynamics poses a problem of capturing GP effects by approximate methods of simulating nonadiabatic dynamics that can go beyond simple models. We assess the performance of both fully quantum (wave packet dynamics) and quantum-classical (surface-hopping, Ehrenfest, and quantum-classical Liouville equation) approaches in various cases where GP effects are important. It has been identified that the key to success in approximate methods is a method organization that prevents the quantum nuclear kinetic energy operator to act directly on adiabatic electronic wave functions.
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Affiliation(s)
- Ilya G. Ryabinkin
- Department
of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
- Chemical
Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Loïc Joubert-Doriol
- Department
of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
- Chemical
Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Artur F. Izmaylov
- Department
of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
- Chemical
Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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27
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Medders GR, Alguire EC, Jain A, Subotnik JE. Ultrafast Electronic Relaxation through a Conical Intersection: Nonadiabatic Dynamics Disentangled through an Oscillator Strength-Based Diabatization Framework. J Phys Chem A 2017; 121:1425-1434. [DOI: 10.1021/acs.jpca.6b12120] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Gregory R. Medders
- Department
of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
| | - Ethan C. Alguire
- Department
of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
| | - Amber Jain
- Department
of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
| | - Joseph E. Subotnik
- Department
of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
- Stanford
PULSE Institute, SLAC National Accelerator Laboratory, Menlo Park, California 94025, United States
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28
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Malbon CL, Zhu X, Guo H, Yarkony DR. On the incorporation of the geometric phase in general single potential energy surface dynamics: A removable approximation to ab initio data. J Chem Phys 2016; 145:234111. [DOI: 10.1063/1.4971369] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - Xiaolei Zhu
- Department of Chemistry, Stanford University, Stanford, California 94305, USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - David R. Yarkony
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, USA
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29
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Malhado JP, Hynes JT. Non-adiabatic transition probability dependence on conical intersection topography. J Chem Phys 2016; 145:194104. [PMID: 27875884 DOI: 10.1063/1.4967259] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We derive a closed form analytical expression for the non-adiabatic transition probability for a distribution of trajectories passing through a generic conical intersection (CI), based on the Landau-Zener equation for the non-adiabatic transition probability for a single straight-line trajectory in the CI's vicinity. We investigate the non-adiabatic transition probability's variation with topographical features and find, for the same crossing velocity, no intrinsic difference in efficiency at promoting non-adiabatic decay between peaked and sloped CIs, a result in contrast to the commonly held view. Any increased efficiency of peaked over sloped CIs is thus due to dynamical effects rather than to any increased transition probability of topographical origin. It is also shown that the transition probability depends in general on the direction of approach to the CI, and that the coordinates' reduced mass can affect the transition probability via its influence on the CI topography in mass-scaled coordinates. The resulting predictions compare well with surface hopping simulation results.
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Affiliation(s)
- João Pedro Malhado
- Department of Chemistry, Imperial College London, London SW7 2AZ, United Kingdom
| | - James T Hynes
- Department of Chemistry, École Normale Supérieure-PSL Research University, Sorbonne Universités-UPMC University Paris 06, CNRS UMR 8640 Pasteur, 24 rue Lhomond, 75005 Paris, France
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30
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Meek GA, Levine BG. The best of both Reps—Diabatized Gaussians on adiabatic surfaces. J Chem Phys 2016; 145:184103. [DOI: 10.1063/1.4966967] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Affiliation(s)
- Garrett A. Meek
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, USA
| | - Benjamin G. Levine
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, USA
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31
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Eich FG, Agostini F. The adiabatic limit of the exact factorization of the electron-nuclear wave function. J Chem Phys 2016; 145:054110. [DOI: 10.1063/1.4959962] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- F. G. Eich
- Max Planck Institute for the Structure and Dynamics of Matter, Luruper Chaussee 149, D-22761 Hamburg, Germany
| | - Federica Agostini
- Max Planck Institute of Microstructure Physics, Weinberg 2, D-06120 Halle, Germany
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32
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Affiliation(s)
- Xiaolei Zhu
- Department of Chemistry, Johns Hopkins University Baltimore, MD, USA
| | - David R. Yarkony
- Department of Chemistry, Johns Hopkins University Baltimore, MD, USA
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33
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Subotnik JE, Jain A, Landry B, Petit A, Ouyang W, Bellonzi N. Understanding the Surface Hopping View of Electronic Transitions and Decoherence. Annu Rev Phys Chem 2016; 67:387-417. [DOI: 10.1146/annurev-physchem-040215-112245] [Citation(s) in RCA: 234] [Impact Index Per Article: 26.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Joseph E. Subotnik
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104;
| | - Amber Jain
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104;
| | - Brian Landry
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104;
| | - Andrew Petit
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104;
| | - Wenjun Ouyang
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104;
| | - Nicole Bellonzi
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104;
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34
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Meek GA, Levine BG. Wave function continuity and the diagonal Born-Oppenheimer correction at conical intersections. J Chem Phys 2016; 144:184109. [DOI: 10.1063/1.4948786] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Affiliation(s)
- Garrett A. Meek
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, USA
| | - Benjamin G. Levine
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, USA
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35
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Gherib R, Ye L, Ryabinkin IG, Izmaylov AF. On the inclusion of the diagonal Born-Oppenheimer correction in surface hopping methods. J Chem Phys 2016; 144:154103. [DOI: 10.1063/1.4945817] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Rami Gherib
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Liyuan Ye
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
| | - Ilya G. Ryabinkin
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Artur F. Izmaylov
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, Toronto, Ontario M1C 1A4, Canada
- Chemical Physics Theory Group, Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
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36
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Banerjee S, Baiardi A, Bloino J, Barone V. Vibronic Effects on Rates of Excitation Energy Transfer and Their Temperature Dependence. J Chem Theory Comput 2016; 12:2357-65. [DOI: 10.1021/acs.jctc.6b00157] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shiladitya Banerjee
- Scuola Normale
Superiore, piazza dei Cavalieri 7, I-56126 Pisa, Italy
- Consiglio Nazionale
delle Ricerche, Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR),
UOS di Pisa, Area della Ricerca CNR, Via G. Moruzzi 1, I-56124 Pisa, Italy
| | - Alberto Baiardi
- Scuola Normale
Superiore, piazza dei Cavalieri 7, I-56126 Pisa, Italy
| | - Julien Bloino
- Consiglio Nazionale
delle Ricerche, Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR),
UOS di Pisa, Area della Ricerca CNR, Via G. Moruzzi 1, I-56124 Pisa, Italy
| | - Vincenzo Barone
- Scuola Normale
Superiore, piazza dei Cavalieri 7, I-56126 Pisa, Italy
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37
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Ellis BH, Aggarwal S, Chakraborty A. Development of the Multicomponent Coupled-Cluster Theory for Investigation of Multiexcitonic Interactions. J Chem Theory Comput 2015; 12:188-200. [DOI: 10.1021/acs.jctc.5b00879] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Benjamin H. Ellis
- Department
of Chemistry, Syracuse University, Syracuse, New York 13244, United States
| | - Somil Aggarwal
- Jamesville-DeWitt
High School, DeWitt, New York 13214, United States
| | - Arindam Chakraborty
- Department
of Chemistry, Syracuse University, Syracuse, New York 13244, United States
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