1
|
Zeng W, Xue J, Geng H, Liu X, Yang J, Shen W, Yuan Y, Qiang Y, Zhu Q. Research progress on chemical modifications of tyrosine residues in peptides and proteins. Biotechnol Bioeng 2024; 121:799-822. [PMID: 38079153 DOI: 10.1002/bit.28622] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Revised: 10/11/2023] [Accepted: 11/26/2023] [Indexed: 02/20/2024]
Abstract
The chemical modifications (CMs) of protein is an important technique in chemical biology, protein-based therapy, and material science. In recent years, there has been rapid advances in the development of CMs of peptides and proteins, providing new approaches for peptide and protein functionalization, as well as drug discovery. In this review, we highlight the methods for chemically modifying tyrosine (Tyr) residues in different regions, offering a comprehensive exposition of the research content related to Tyr modification. This review summarizes and provides an outlook on Tyr residue modification, aiming to offer readers assistance in the site-selective modification of macromolecules and to facilitate application research in this field.
Collapse
Affiliation(s)
- Wei Zeng
- Department of Biotechnology and the Quality Management, Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou, China
| | - Jianyuan Xue
- Department of Biotechnology and the Quality Management, Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou, China
| | - Haoxing Geng
- Department of Biotechnology and the Quality Management, Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou, China
| | - Xia Liu
- Department of Biotechnology and the Quality Management, Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou, China
| | - Jin Yang
- Department of Biotechnology and the Quality Management, Zhejiang Pharmaceutical Industry Co. Ltd., Hangzhou, China
| | - Wei Shen
- Department of Surgery, Affiliated Jinhua Hospital, Zhejiang University School of Medicine, Jinhua, China
| | - Yuqing Yuan
- Department of Biotechnology and the Quality Management, Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou, China
| | - Yujie Qiang
- Department of Biotechnology and the Quality Management, Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou, China
| | - Qing Zhu
- Department of Biotechnology and the Quality Management, Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou, China
| |
Collapse
|
2
|
Jdanova S, Taylor MS. Mechanistic Study of the Copper(II)-Mediated Site-Selective O-Arylation of Glycosides with Arylboronic Acids. J Org Chem 2023; 88:3487-3498. [PMID: 36888595 DOI: 10.1021/acs.joc.2c02693] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023]
Abstract
Glycosides having multiple free OH groups have been shown to undergo site-selective O-arylations in the presence of arylboronic acids and copper(II) acetate. Herein, a mechanistic analysis of these Chan-Evans-Lam-type couplings is presented based on reaction kinetics, mass spectrometric analysis of reaction mixtures, and substituent effect studies. The results establish that the formation of a substrate-derived boronic ester accelerates the rate-determining transmetalation step. Intramolecular transfer of the aryl group from the boronic ester is ruled out in favor of a pathway in which the key pre-transmetalation assembly is generated from a boronic ester, a copper complex, and a second equivalent of arylboronic acid.
Collapse
Affiliation(s)
- Sofia Jdanova
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6 Canada
| | - Mark S Taylor
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6 Canada
| |
Collapse
|
3
|
Weng Y, Zhan X, Zhang Y, Lin W. Palladium-Catalyzed C(sp 2)-H Arylation of Peptides Directed by Aspartic Acid. J Org Chem 2023; 88:2334-2343. [PMID: 36709459 DOI: 10.1021/acs.joc.2c02755] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
Herein, we report a palladium-catalyzed C(sp2)-H di- or monoarylation of short peptides containing N-terminal benzamide groups using aspartic acid (Asp) as an endogenous directing group. This strategy has the following merits: a broad substrate scope, selective diarylation of peptides, and gram-scale synthesis. Furthermore, this strategy can be successfully utilized to synthesize peptide-peptide conjugates.
Collapse
Affiliation(s)
- Yiyi Weng
- College of Pharmaceutical Sciences, Zhejiang University of Technology, Hangzhou 310014, P. R. China
| | - Xuecheng Zhan
- College of Pharmaceutical Sciences, Zhejiang University of Technology, Hangzhou 310014, P. R. China
| | - Yiyang Zhang
- College of Pharmaceutical Sciences, Zhejiang University of Technology, Hangzhou 310014, P. R. China
| | - Wen Lin
- College of Pharmaceutical Sciences, Zhejiang University of Technology, Hangzhou 310014, P. R. China
| |
Collapse
|
4
|
Wan C, Hou Z, Yang D, Zhou Z, Xu H, Wang Y, Dai C, Liang M, Meng J, Chen J, Yin F, Wang R, Li Z. The thiol-sulfoxonium ylide photo-click reaction for bioconjugation. Chem Sci 2023; 14:604-612. [PMID: 36741507 PMCID: PMC9847666 DOI: 10.1039/d2sc05650j] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 12/01/2022] [Indexed: 12/04/2022] Open
Abstract
Visible-light-mediated methods were heavily studied as a useful tool for cysteine-selective bio-conjugation; however, many current methods suffer from bio-incompatible reaction conditions and slow kinetics. To address these challenges, herein, we report a transition metal-free thiol-sulfoxonium ylide photo-click reaction that enables bioconjugation under bio-compatible conditions. The reaction is highly cysteine-selective and generally finished within minutes with naturally occurring riboflavin derivatives as organic photocatalysts. The catalysts and substrates are readily accessible and bench stable and have satisfactory water solubility. As a proof-of-concept study, the reaction was smoothly applied in chemo-proteomic analysis, which provides efficient tools to explore the druggable content of the human proteome.
Collapse
Affiliation(s)
- Chuan Wan
- State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate SchoolShenzhen518055P. R. China
| | - Zhanfeng Hou
- State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate SchoolShenzhen518055P. R. China
| | - Dongyan Yang
- College of Chemistry and Chemical Engineering, Zhongkai University of Agriculture and EngineeringGuangzhou510225P. R. China
| | - Ziyuan Zhou
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital & Shenzhen Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeShenzhen518116P. R. China
| | - Hongkun Xu
- State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate SchoolShenzhen518055P. R. China
| | - Yuena Wang
- State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate SchoolShenzhen518055P. R. China
| | - Chuan Dai
- State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate SchoolShenzhen518055P. R. China
| | - Mingchan Liang
- Pingshan Translational Medicine Center, Shenzhen Bay LaboratoryShenzhen518118P. R. China
| | - Jun Meng
- National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital & Shenzhen Hospital, Chinese Academy of Medical Sciences and Peking Union Medical CollegeShenzhen518116P. R. China
| | - Jiean Chen
- Pingshan Translational Medicine Center, Shenzhen Bay LaboratoryShenzhen518118P. R. China
| | - Feng Yin
- Pingshan Translational Medicine Center, Shenzhen Bay LaboratoryShenzhen518118P. R. China
| | - Rui Wang
- Pingshan Translational Medicine Center, Shenzhen Bay LaboratoryShenzhen518118P. R. China
| | - Zigang Li
- State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate SchoolShenzhen518055P. R. China,Pingshan Translational Medicine Center, Shenzhen Bay LaboratoryShenzhen518118P. R. China
| |
Collapse
|
5
|
Chen Z, Zhu M, Cai M, Xu L, Weng Y. Palladium-Catalyzed C(sp 3)–H Arylation and Alkynylation of Peptides Directed by Aspartic Acid (Asp). ACS Catal 2021. [DOI: 10.1021/acscatal.1c01417] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Zhuo Chen
- College of Pharmaceutical Sciences, Zhejiang University of Technology, 310014 Hangzhou, P. R. China
| | - Meijie Zhu
- College of Pharmaceutical Sciences, Zhejiang University of Technology, 310014 Hangzhou, P. R. China
| | - Mengwei Cai
- College of Pharmaceutical Sciences, Zhejiang University of Technology, 310014 Hangzhou, P. R. China
| | - Lulu Xu
- College of Pharmaceutical Sciences, Zhejiang University of Technology, 310014 Hangzhou, P. R. China
| | - Yiyi Weng
- College of Pharmaceutical Sciences, Zhejiang University of Technology, 310014 Hangzhou, P. R. China
| |
Collapse
|
6
|
Fang G, Wang H, Zheng C, Pan L, Zhao G. Enantioselectivity switch in asymmetric Michael addition reactions using phosphonium salts. Org Biomol Chem 2021; 19:6334-6340. [PMID: 34231639 DOI: 10.1039/d1ob01027a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Efficient access to two enantiomers of one chiral compound is critical for the discovery of drugs. However, it is still a challenging problem owing to the difficulty in obtaining two enantiomers of one chiral catalyst. Here, we report a general method to obtain both enantiomeric products via fine tuning the hydrogen-bonding interactions of phosphonium salts. Amino acid derived phosphonium salts and dipeptide derived phosphonium salts exhibited different properties for controlling the transition state, which could efficiently promote the Michael addition reaction to give opposite configurations of products with high yields and enantioselectivities. Preliminary investigations on the mechanism of the reaction and applications of the products were also performed.
Collapse
Affiliation(s)
- Guosheng Fang
- Department of Chemistry, University of Science and Technology of China, Hefei 230026, Anhui, China.
| | - Hongyu Wang
- Center for Excellence in Molecular Synthesis, Key Laboratory of Synthetic Chemistry of Natural Substances, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 LingLing Road, Shanghai 200032, China
| | - Changwu Zheng
- Center for Excellence in Molecular Synthesis, Key Laboratory of Synthetic Chemistry of Natural Substances, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 LingLing Road, Shanghai 200032, China
| | - Lu Pan
- Center for Excellence in Molecular Synthesis, Key Laboratory of Synthetic Chemistry of Natural Substances, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 LingLing Road, Shanghai 200032, China
| | - Gang Zhao
- Department of Chemistry, University of Science and Technology of China, Hefei 230026, Anhui, China. and Center for Excellence in Molecular Synthesis, Key Laboratory of Synthetic Chemistry of Natural Substances, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 LingLing Road, Shanghai 200032, China
| |
Collapse
|