1
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Liu N, Zhang Y, Wang X, Niu K, Lu F, Chen J, Zhong D. Optical Quantum Control of the Electron Transfer Reactions in Protein Flavodoxin. J Phys Chem B 2024. [PMID: 39485371 DOI: 10.1021/acs.jpcb.4c04254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2024]
Abstract
The optical quantum control has been successfully applied in modulating biological processes such as energy transfer and bond isomerization. Among the reactions in realizing biological functions, the electron transfer (ET) process is fundamental; hence, the quantum control over such an ET reaction is of far-reaching significance. Here, we realized optical quantum control over ultrafast ET processes in a protein, flavodoxin, by applying various chirped excitation pulses. We observed the wavepacket dynamics within a dephasing time of less than 1 ps. Within this time window, we found that the ultrafast photoinduced ET reaction can be controlled by different chirped excitations with a rate change by a factor of about 2. Furthermore, the control effect is propagated into the subsequent ultrafast back ET reaction, showing a variation of the BET dynamics with different excitation chirps. The underlying mechanism is the initial wavepacket dynamics; the differently prepared wavepackets with chirped excitation evolve along various pathways, resulting in the changes of ET rates. The successful demonstration of optical quantum control of ultrafast biological ET is significant and opens a new avenue to explore the quantum control of real biological ET reactions.
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Affiliation(s)
- Na Liu
- Center for Ultrafast Science and Technology, School of Physics and Astronomy, Zhang Jiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Yifei Zhang
- Center for Ultrafast Science and Technology, School of Chemistry and Chemical Engineering, Zhang Jiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Xi Wang
- Center for Ultrafast Science and Technology, School of Physics and Astronomy, Zhang Jiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Kangwei Niu
- Center for Ultrafast Science and Technology, School of Physics and Astronomy, Zhang Jiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Faming Lu
- Center for Ultrafast Science and Technology, School of Physics and Astronomy, Zhang Jiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Jie Chen
- Center for Ultrafast Science and Technology, School of Physics and Astronomy, Zhang Jiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Dongping Zhong
- Center for Ultrafast Science and Technology, School of Chemistry and Chemical Engineering, Zhang Jiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai 200240, China
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2
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Rather SR, Scholes GD, Chen LX. From Coherence to Function: Exploring the Connection in Chemical Systems. Acc Chem Res 2024; 57:2620-2630. [PMID: 39222721 DOI: 10.1021/acs.accounts.4c00312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/04/2024]
Abstract
ConspectusThe role of quantum mechanical coherences or coherent superposition states in excited state processes has received considerable attention in the last two decades largely due to advancements in ultrafast laser spectroscopy. These coherence effects hold promise for enhancing the efficiency and robustness of functionally relevant processes, even when confronted with energy disorder and environmental fluctuations. Understanding coherence deeply drives us to unravel mechanisms and dynamics controlled by order and synchronization at a quantum mechanical level, envisioning optical control of coherence to enhance functions or create new ones in molecular and material systems. In this frontier, the interplay between electronic and vibrational dynamics, specifically the influence of vibrations in directing electronic dynamics, has emerged as the leading principle. Here, two energetically disparate quantum degrees of freedom work in-sync to dictate the trajectory of an excited state reaction. Moreover, with the vibrational degree being directly related to the structural composition of molecular or material systems, new molecular designs could be inspired by tailoring certain structural elements.In the realm of chemical kinetics, our understanding of the dynamics of chemical transformations is underpinned by fundamental theories, such as transition state theory, activated rate theory, and Marcus theory. These theories elucidate reaction rates by considering the energy barriers that must be overcome for reactants to transform into products. Those barriers are surmounted by the stochastic nature of energy gap fluctuations within reacting systems, emphasizing that the reaction coordinate, the pathway from reactants to products, is not rigidly defined by a specific vibrational motion but encompasses a diverse array of molecular motions. While less is known about the involvement of specific intramolecular vibrational modes, their significance in certain cases cannot be overlooked.In this Account, we summarize key experimental findings that offer deeper insights into the complex electronic-vibrational trajectories encompassing excited states afforded from state-of-the-art ultrafast laser spectroscopy in three exemplary processes: photoinduced electron transfer, singlet-triplet intersystem crossing, and intramolecular vibrational energy flow in molecular systems. We delve into the rapid decoherence, or loss of phase and amplitude correlations, of vibrational coherences along promoter vibrations during subpicosecond intersystem crossing dynamics in a series of binuclear platinum complexes. This rapid decoherence illustrates the vibration-driven reactive pathways from the Franck-Condon state to the curve crossing region. We also explore the generation of new vibrational coherences induced by impulsive reaction dynamics rather than by the laser pulse in these systems, which sheds light on specific energy dissipation pathways and thereby on the progression of the reaction trajectory in the vicinity of the curve crossing on the product side. Another property of vibrational coherences, amplitude, reveals how energy can flow from one vibration to another in the electronic excited state of a terpyridine-molybdenum complex hosting a nonreactive dinitrogen substrate. A slight change in vibrational energy triggers a quasi-resonant interaction, leading to constructive wavepacket interference and ultimately intramolecular vibrational redistribution from a Franck-Condon active terpyridine vibration to a dinitrogen stretching vibration, energizing the dinitrogen bond.
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Affiliation(s)
- Shahnawaz R Rather
- Department of Chemistry, University of Kentucky, Lexington, Kentucky 40506, United States
| | - Gregory D Scholes
- Department of Chemistry, Princeton University, Princeton, New Jersey 08541, United States
| | - Lin X Chen
- Department of Chemistry, Northwestern University, Evanston, Illinois 60204, United States
- Chemical Science and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
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3
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Wang J, Zhu R, Zou J, Liu H, Meng H, Zhen Z, Li W, Wang Z, Chen H, Pu Y, Weng Y. Incoherent ultrafast energy transfer in phycocyanin 620 from Thermosynechococcus vulcanus revealed by polarization-controlled two dimensional electronic spectroscopy. J Chem Phys 2024; 161:085101. [PMID: 39171718 DOI: 10.1063/5.0222587] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2024] [Accepted: 08/06/2024] [Indexed: 08/23/2024] Open
Abstract
Phycocyanin 620 (PC620) is the outermost light-harvesting complex in phycobilisome of cyanobacteria, engaged in light collection and energy transfer to the core antenna, allophycocyanin. Recently, long-lived exciton-vibrational coherences have been observed in allophycocyanin, accounting for the coherent energy transfer [Zhu et al., Nat. Commun. 15, 3171 (2024)]. PC620 has a nearly identical spatial location of three α84-β84 phycocyanobilin pigment pairs to those in allophycocyanin, inferring an existence of possible coherent energy transfer pathways. However, whether PC620 undergoes coherent or incoherent energy transfer remains debated. Furthermore, accurate determination of energy transfer rates in PC620 is still necessary owing to the spectral overlap and broadening in conventional time-resolved spectroscopic measurements. In this work, the energy transfer process within PC620 was directly resolved by polarization-controlled two dimensional electronic spectroscopy (2DES) and global analysis. The results show that the energy transfer from α84 to the adjacent β84 has a lifetime constant of 400 fs, from β155 to β84 of 6-8 ps, and from β155 to α84 of 66 ps, fully conforming to the Förster resonance energy transfer mechanism. The circular dichroism spectrum also reveals that the α84-β84 pigment pair does not form excitonic dimer, and the observed oscillatory signals are confirmed to be vibrational coherence, excluding the exciton-vibrational coupling. Nodal line slope analysis of 2DES further reveals that all the vibrational modes participate in the energy dissipation of the excited states. Our results consolidate that the ultrafast energy transfer process in PC620 is incoherent, where the twisted conformation of α84 is suggested as the main cause for preventing the formation of α84-β84 excitonic dimer in contrast to allophycocyanin.
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Affiliation(s)
- Jiayu Wang
- Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Ruidan Zhu
- Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
| | - Jiading Zou
- Songshan Lake Materials Laboratory, Dongguan 523808, Guangdong, People's Republic of China
| | - Heyuan Liu
- Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Hanting Meng
- Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
| | - Zhanghe Zhen
- Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
| | - Wenjun Li
- Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai 264003, People's Republic of China
| | - Zhuan Wang
- Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
| | - Hailong Chen
- Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
- Songshan Lake Materials Laboratory, Dongguan 523808, Guangdong, People's Republic of China
| | - Yang Pu
- School of Agriculture, Ludong University, Yantai 264025, People's Republic of China
| | - Yuxiang Weng
- Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
- University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
- Songshan Lake Materials Laboratory, Dongguan 523808, Guangdong, People's Republic of China
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4
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Green D, Bressan G, Heisler IA, Meech SR, Jones GA. Vibrational coherences in half-broadband 2D electronic spectroscopy: Spectral filtering to identify excited state displacements. J Chem Phys 2024; 160:234104. [PMID: 38884412 DOI: 10.1063/5.0214023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Accepted: 06/03/2024] [Indexed: 06/18/2024] Open
Abstract
Vibrational coherences in ultrafast pump-probe (PP) and 2D electronic spectroscopy (2DES) provide insights into the excited state dynamics of molecules. Femtosecond coherence spectra and 2D beat maps yield information about displacements of excited state surfaces for key vibrational modes. Half-broadband 2DES uses a PP configuration with a white light continuum probe to extend the detection range and resolve vibrational coherences in the excited state absorption (ESA). However, the interpretation of these spectra is difficult as they are strongly dependent on the spectrum of the pump laser and the relative displacement of the excited states along the vibrational coordinates. We demonstrate the impact of these convoluting factors for a model based upon cresyl violet. A careful consideration of the position of the pump spectrum can be a powerful tool in resolving the ESA coherences to gain insights into excited state displacements. This paper also highlights the need for caution in considering the spectral window of the pulse when interpreting these spectra.
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Affiliation(s)
- Dale Green
- Physics, Faculty of Science, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| | - Giovanni Bressan
- School of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| | - Ismael A Heisler
- Instituto de Física, Universidade Federal do Rio Grande do Sul, 91509-900 Porto Alegre, RS, Brazil
| | - Stephen R Meech
- School of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| | - Garth A Jones
- School of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom
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5
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Sayer T, Montoya-Castillo A. Efficient formulation of multitime generalized quantum master equations: Taming the cost of simulating 2D spectra. J Chem Phys 2024; 160:044108. [PMID: 38270238 DOI: 10.1063/5.0185578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Accepted: 12/26/2023] [Indexed: 01/26/2024] Open
Abstract
Modern 4-wave mixing spectroscopies are expensive to obtain experimentally and computationally. In certain cases, the unfavorable scaling of quantum dynamics problems can be improved using a generalized quantum master equation (GQME) approach. However, the inclusion of multiple (light-matter) interactions complicates the equation of motion and leads to seemingly unavoidable cubic scaling in time. In this paper, we present a formulation that greatly simplifies and reduces the computational cost of previous work that extended the GQME framework to treat arbitrary numbers of quantum measurements. Specifically, we remove the time derivatives of quantum correlation functions from the modified Mori-Nakajima-Zwanzig framework by switching to a discrete-convolution implementation inspired by the transfer tensor approach. We then demonstrate the method's capabilities by simulating 2D electronic spectra for the excitation-energy-transfer dimer model. In our method, the resolution of data can be arbitrarily coarsened, especially along the t2 axis, which mirrors how the data are obtained experimentally. Even in a modest case, this demands O(103) fewer data points. We are further able to decompose the spectra into one-, two-, and three-time correlations, showing how and when the system enters a Markovian regime where further measurements are unnecessary to predict future spectra and the scaling becomes quadratic. This offers the ability to generate long-time spectra using only short-time data, enabling access to timescales previously beyond the reach of standard methodologies.
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Affiliation(s)
- Thomas Sayer
- Department of Chemistry, University of Colorado Boulder, Boulder, Colorado 80309, USA
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6
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Zhu H, Chen B, Yakovlev VV, Zhang D. Time-resolved vibrational dynamics: Novel opportunities for sensing and imaging. Talanta 2024; 266:125046. [PMID: 37595525 DOI: 10.1016/j.talanta.2023.125046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 07/19/2023] [Accepted: 08/05/2023] [Indexed: 08/20/2023]
Abstract
The evolution of time-resolved spectroscopies has resulted in significant advancements across numerous scientific disciplines, particularly those concerned with molecular electronic states. However, the intricacy of molecular vibrational spectroscopies, which provide comprehensive molecular-level information within complex structures, has presented considerable challenges due to the ultrashort dephasing time. Over recent decades, an increasing focus has been placed on exploring the temporal progression of bond vibrations, thereby facilitating an improved understanding of energy redistribution within and between molecules. This review article focuses on an array of time-resolved detection methodologies, each distinguished by unique technological attributes that offer exclusive capabilities for investigating the physical phenomena propelled by molecular vibrational dynamics. In summary, time-resolved vibrational spectroscopy emerges as a potent instrument for deciphering the dynamic behavior of molecules. Its potential for driving future progress across fields as diverse as biology and materials science is substantial, marking a promising future for this innovative tool.
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Affiliation(s)
- Hanlin Zhu
- Interdisciplinary Center for Quantum Information, Zhejiang Province Key Laboratory of Quantum Technology and Device, and Department of Physics, Zhejiang University, Hangzhou, Zhejiang, 310028, China.
| | - Bo Chen
- Interdisciplinary Center for Quantum Information, Zhejiang Province Key Laboratory of Quantum Technology and Device, and Department of Physics, Zhejiang University, Hangzhou, Zhejiang, 310028, China.
| | - Vladislav V Yakovlev
- Department of Biomedical Engineering, Texas A&M University, College Station, TX, 77843, USA; Department of Physics and Astronomy, Texas A&M University, College Station, TX, 77843, USA; Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, 77843, USA.
| | - Delong Zhang
- Interdisciplinary Center for Quantum Information, Zhejiang Province Key Laboratory of Quantum Technology and Device, and Department of Physics, Zhejiang University, Hangzhou, Zhejiang, 310028, China.
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7
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Liu N, Zhang Y, Niu K, Lu F, Zhong D. Optical Control of Crossing the Conical Intersection in β-Carotene. J Phys Chem Lett 2023; 14:9215-9221. [PMID: 37811837 DOI: 10.1021/acs.jpclett.3c01932] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/10/2023]
Abstract
Optical control of dynamic processes has been challenging yet has only been demonstrated in several chemical and biological systems. The control of a reaction passing the widely present conical intersection has not been realized. Here, we modulated the phase of the excitation pulse to control the dynamics of β-carotene through accessing the conical intersection (CI). We observed different dynamics in 110-220 fs into the CI and the consecutive process in 400-600 fs through another CI by various chirped excitation pulses. We successfully controlled those ultrafast wavepacket dynamics passing the CIs on the femtosecond time scales. The method developed here can be used to control a various of ultrafast chemical and biological reactions through the CI(s).
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Affiliation(s)
| | | | | | | | - Dongping Zhong
- Department of Physics, Department of Chemistry and Biochemistry, and Program of Biophysics, Program of Chemical Physics, and Program of Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States
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8
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Rafiq S, Weingartz NP, Kromer S, Castellano FN, Chen LX. Spin-vibronic coherence drives singlet-triplet conversion. Nature 2023; 620:776-781. [PMID: 37468632 DOI: 10.1038/s41586-023-06233-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Accepted: 05/18/2023] [Indexed: 07/21/2023]
Abstract
Design-specific control over the transitions between excited electronic states with different spin multiplicities is of the utmost importance in molecular and materials chemistry1-3. Previous studies have indicated that the combination of spin-orbit and vibronic effects, collectively termed the spin-vibronic effect, can accelerate quantum-mechanically forbidden transitions at non-adiabatic crossings4,5. However, it has been difficult to identify precise experimental manifestations of the spin-vibronic mechanism. Here we present coherence spectroscopy experiments that reveal the interplay between the spin, electronic and vibrational degrees of freedom that drive efficient singlet-triplet conversion in four structurally related dinuclear Pt(II) metal-metal-to-ligand charge-transfer (MMLCT) complexes. Photoexcitation activates the formation of a Pt-Pt bond, launching a stretching vibrational wavepacket. The molecular-structure-dependent decoherence and recoherence dynamics of this wavepacket resolve the spin-vibronic mechanism. We find that vectorial motion along the Pt-Pt stretching coordinates tunes the singlet and intermediate-state energy gap irreversibly towards the conical intersection and subsequently drives formation of the lowest stable triplet state in a ratcheting fashion. This work demonstrates the viability of using vibronic coherences as probes6-9 to clarify the interplay among spin, electronic and nuclear dynamics in spin-conversion processes, and this could inspire new modular designs to tailor the properties of excited states.
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Affiliation(s)
- Shahnawaz Rafiq
- Department of Chemistry, Northwestern University, Evanston, IL, USA
| | - Nicholas P Weingartz
- Department of Chemistry, Northwestern University, Evanston, IL, USA
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, IL, USA
| | - Sarah Kromer
- Department of Chemistry, North Carolina State University, Raleigh, NC, USA
| | - Felix N Castellano
- Department of Chemistry, North Carolina State University, Raleigh, NC, USA.
| | - Lin X Chen
- Department of Chemistry, Northwestern University, Evanston, IL, USA.
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, IL, USA.
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9
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Hong Y, Schlosser F, Kim W, Würthner F, Kim D. Ultrafast Symmetry-Breaking Charge Separation in a Perylene Bisimide Dimer Enabled by Vibronic Coupling and Breakdown of Adiabaticity. J Am Chem Soc 2022; 144:15539-15548. [PMID: 35951363 DOI: 10.1021/jacs.2c03916] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Perylene bisimides (PBIs) have received great attention in their applicability to optoelectronics. Especially, symmetry-breaking charge separation (SB-CS) in PBIs has been investigated to mimic the efficient light capturing and charge generation in natural light-harvesting systems. However, unlike ultrafast CS dynamics in donor-acceptor heterojunction materials, ultrafast SB-CS in a stacked homodimer has still been challenging due to excimer formation in the absence of rigidifying surroundings such as a special pair in the natural systems. Herein, we present the detailed mechanism of ultrafast photoinduced SB-CS occurring in a 1,7-bis(N-pyrrolidinyl) PBI dimer within a cyclophane. Through narrow-band and broad-band transient absorption spectroscopy, we demonstrate that ultrafast SB-CS in the dimer is enabled by the combination of (1) vibrationally coherent charge-transfer resonance-enhanced excimer formation and (2) breakdown of adiabaticity (formation of SB-CS diabats) in the excimer state via structural and solvent fluctuation. Quantum chemical calculations also underpin that the participation of strong electron-donating substituents in overall vibrational modes plays a crucial role in triggering the ultrafast SB-CS. Therefore, our work provides an alternative route to facilitate ultrafast SB-CS in PBIs and thereby establishes a novel strategy for the design of optoelectronic materials.
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Affiliation(s)
- Yongseok Hong
- Department of Chemistry, Yonsei University, Seoul 03722, Korea
| | - Felix Schlosser
- Institut für Organische Chemie & Center for Nanosystems Chemistry, Universitat Würzburg, Am Hubland, Würzburg 97074, Germany
| | - Woojae Kim
- Department of Chemistry, Yonsei University, Seoul 03722, Korea
| | - Frank Würthner
- Institut für Organische Chemie & Center for Nanosystems Chemistry, Universitat Würzburg, Am Hubland, Würzburg 97074, Germany
| | - Dongho Kim
- Department of Chemistry, Yonsei University, Seoul 03722, Korea.,Division of Energy Materials, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea
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10
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Barclay M, Huff JS, Pensack RD, Davis PH, Knowlton WB, Yurke B, Dean JC, Arpin PC, Turner DB. Characterizing Mode Anharmonicity and Huang-Rhys Factors Using Models of Femtosecond Coherence Spectra. J Phys Chem Lett 2022; 13:5413-5423. [PMID: 35679146 PMCID: PMC9234982 DOI: 10.1021/acs.jpclett.1c04162] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 06/06/2022] [Indexed: 06/15/2023]
Abstract
Femtosecond laser pulses readily produce coherent quantum beats in transient-absorption spectra. These oscillatory signals often arise from molecular vibrations and therefore may contain information about the excited-state potential energy surface near the Franck-Condon region. Here, by fitting the measured spectra of two laser dyes to microscopic models of femtosecond coherence spectra (FCS) arising from molecular vibrations, we classify coherent quantum-beat signals as fundamentals or overtones and quantify their Huang-Rhys factors and anharmonicity values. We discuss the extracted Huang-Rhys factors in the context of quantum-chemical computations. This work solidifies the use of FCS for analysis of coherent quantum beats arising from molecular vibrations, which will aid studies of molecular aggregates and photosynthetic proteins.
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Affiliation(s)
- Matthew
S. Barclay
- Micron
School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, United States
| | - Jonathan S. Huff
- Micron
School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, United States
| | - Ryan D. Pensack
- Micron
School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, United States
| | - Paul H. Davis
- Micron
School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, United States
| | - William B. Knowlton
- Micron
School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, United States
- Department
of Electrical & Computer Engineering, Boise State University, Boise, Idaho 83725, United States
| | - Bernard Yurke
- Micron
School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, United States
- Department
of Electrical & Computer Engineering, Boise State University, Boise, Idaho 83725, United States
| | - Jacob C. Dean
- Department
of Physical Science, Southern Utah University, Cedar City, Utah 84720, United States
| | - Paul C. Arpin
- Department
of Physics, California State University,
Chico, Chico, California 95929, United States
| | - Daniel B. Turner
- Micron
School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, United States
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11
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Ross AM, Osella S, Policht VR, Zheng M, Maggini M, Marangi F, Cerullo G, Gatti T, Scotognella F. Deciphering Photoinduced Charge Transfer Dynamics in a Cross-Linked Graphene-Dye Nanohybrid. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2022; 126:3569-3581. [PMID: 35242271 PMCID: PMC8883522 DOI: 10.1021/acs.jpcc.1c10570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 02/04/2022] [Indexed: 06/14/2023]
Abstract
The search for synthetic materials that mimic natural photosynthesis by converting solar energy into other more useful forms of energy is an ever-growing research endeavor. Graphene-based materials, with their exceptional electronic and optical properties, are exemplary candidates for high-efficiency solar energy harvesting devices. High photoactivity can be conveniently achieved by functionalizing graphene with small molecule organic semiconductors whose band-gaps can be tuned by structural modification, leading to interactions between the π-conjugated electronic systems in both the semiconductor and graphene. Here we investigate the ultrafast transient optical properties of a cross-linked graphene-dye (diphenyl-dithiophenediketopyrrolopyrrole) nanohybrid material, in which oligomers of the organic semiconductor dye are covalently bound to a random network of few-layer graphene flakes, and compare the results to those obtained for the reference dye monomer. Using a combination of ultrafast transient absorption and two-dimensional electronic spectroscopy, we provide substantial evidence for photoinduced charge transfer that occurs within 18 ps in the nanohybrid system. Notably, subpicosecond photoinduced torsional relaxation observed in the constituent dye monomer is absent in the cross-linked nanohybrid system. Through density functional theory calculations, we compare the competing effects of covalent bonding, increasing conjugation length, and the presence of multiple graphene flakes. We find evidence that the observed ultrafast charge transfer process occurs through a superexchange mechanism in which the oligomeric dye bridge provides virtual states enabling charge transfer between graphene-dye covalent bond sites.
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Affiliation(s)
- Aaron M. Ross
- Department
of Physics, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Silvio Osella
- Chemical
and Biological Systems Simulation Lab, Centre of New Technologies, University of Warsaw, Banacha 2C, 02-097 Warsaw, Poland
| | - Veronica R. Policht
- Department
of Physics, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Meng Zheng
- Chemical
Sciences Department, Università degli
Studi di Padova, Via Marzolo 1, 35131 Padova, Italy
| | - Michele Maggini
- Chemical
Sciences Department, Università degli
Studi di Padova, Via Marzolo 1, 35131 Padova, Italy
| | - Fabio Marangi
- Department
of Physics, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
- Center
for Nano Science and Technology, Istituto
Italiano di Tecnologia, Via Pascolo, 70/3 Milano 20133, Italy
| | - Giulio Cerullo
- Department
of Physics, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Teresa Gatti
- Center
for Materials Research, Justus Liebig University, Heinrich-Buff-Ring 17, 35392, Giessen, Germany
| | - Francesco Scotognella
- Department
of Physics, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
- Center
for Nano Science and Technology, Istituto
Italiano di Tecnologia, Via Pascolo, 70/3 Milano 20133, Italy
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12
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Biswas S, Kim J, Zhang X, Scholes GD. Coherent Two-Dimensional and Broadband Electronic Spectroscopies. Chem Rev 2022; 122:4257-4321. [PMID: 35037757 DOI: 10.1021/acs.chemrev.1c00623] [Citation(s) in RCA: 44] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Over the past few decades, coherent broadband spectroscopy has been widely used to improve our understanding of ultrafast processes (e.g., photoinduced electron transfer, proton transfer, and proton-coupled electron transfer reactions) at femtosecond resolution. The advances in femtosecond laser technology along with the development of nonlinear multidimensional spectroscopy enabled further insights into ultrafast energy transfer and carrier relaxation processes in complex biological and material systems. New discoveries and interpretations have led to improved design principles for optimizing the photophysical properties of various artificial systems. In this review, we first provide a detailed theoretical framework of both coherent broadband and two-dimensional electronic spectroscopy (2DES). We then discuss a selection of experimental approaches and considerations of 2DES along with best practices for data processing and analysis. Finally, we review several examples where coherent broadband and 2DES were employed to reveal mechanisms of photoinitiated ultrafast processes in molecular, biological, and material systems. We end the review with a brief perspective on the future of the experimental techniques themselves and their potential to answer an even greater range of scientific questions.
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Affiliation(s)
- Somnath Biswas
- Department of Chemistry, Princeton University, Princeton, New Jersey 08 544, United States
| | - JunWoo Kim
- Department of Chemistry, Princeton University, Princeton, New Jersey 08 544, United States
| | - Xinzi Zhang
- Department of Chemistry, Princeton University, Princeton, New Jersey 08 544, United States
| | - Gregory D Scholes
- Department of Chemistry, Princeton University, Princeton, New Jersey 08 544, United States
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13
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van Stokkum IHM, Kloz M, Polli D, Viola D, Weißenborn J, Peerbooms E, Cerullo G, Kennis JTM. Vibronic dynamics resolved by global and target analysis of ultrafast transient absorption spectra. J Chem Phys 2021; 155:114113. [PMID: 34551543 DOI: 10.1063/5.0060672] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present a methodology that provides a complete parametric description of the time evolution of the electronically and vibrationally excited states as detected by ultrafast transient absorption (TA). Differently from previous approaches, which started fitting the data after ≈100 fs, no data are left out in our methodology, and the "coherent artifact" and the instrument response function are fully taken into account. In case studies, the method is applied to solvents, the dye Nile blue, and all-trans β-carotene in cyclohexane solution. The estimated Damped Oscillation Associated Spectra (DOAS) and phases express the most important vibrational frequencies present in the molecular system. By global fit alone of the experimental data, it is difficult to interpret in detail the underlying dynamics. Since it is unfeasible to directly fit the data by a theoretical simulation, our enhanced DOAS methodology thus provides a useful "middle ground" where the theoretical description and the fit of the experimental data can meet. β-carotene in cyclohexane was complementarily studied with femtosecond stimulated Raman spectroscopy (FSRS). The fs-ps dynamics of β-carotene in cyclohexane in TA and FSRS experiments can be described by a sequential scheme S2 → hot S1 → S1' → S1 → S0 with lifetimes of 167 fs (fixed), 0.35, 1.1, and 9.6 ps. The correspondence of DOAS decaying concomitantly with hot S1 and the Species Associated Difference Spectra of hot S1 in TA and FSRS suggest that we observe here features of the vibrational relaxation and nuclear reorganization responsible for the hot S1 to S1 transition.
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Affiliation(s)
- Ivo H M van Stokkum
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Miroslav Kloz
- Institute of Physics, ELI Beamlines, Academy of Sciences of the Czech Republic, CZ-18221 Prague, Czech Republic
| | - Dario Polli
- IFN-CNR, Department of Physics, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Daniele Viola
- IFN-CNR, Department of Physics, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
| | - Jörn Weißenborn
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Ebo Peerbooms
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Giulio Cerullo
- IFN-CNR, Department of Physics, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy
| | - John T M Kennis
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
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14
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Yoneda Y, Kudisch B, Rather SR, Maiuri M, Nagasawa Y, Scholes GD, Miyasaka H. Vibrational Dephasing along the Reaction Coordinate of an Electron Transfer Reaction. J Am Chem Soc 2021; 143:14511-14522. [PMID: 34474559 DOI: 10.1021/jacs.1c01863] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The role of molecular vibration in photoinduced electron transfer (ET) reactions has been extensively debated in recent years. In this study, we investigated vibrational wavepacket dynamics in a model ET system consisting of an organic dye molecule as an electron acceptor dissolved in various electron donating solvents. By using broad band pump-probe (BBPP) spectroscopy with visible laser pulses of sub-10 fs duration, coherent vibrational wavepackets of naphthacene dye with frequencies spanning 170-1600 cm-1 were observed in the time domain. The coherence properties of 11 vibrational modes were analyzed by an inverse Fourier filtering procedure, and we discovered that the dephasing times of some vibrational coherences are reduced with increasing ET rates. Density functional theory calculations indicated that the corresponding vibrational modes have a large Huang-Rhys factor between the reactant and the product states, supporting the hypothesis that the loss of phase coherence along certain vibrational modes elucidates that those vibrations are coupled to the reaction coordinate of an ET reaction.
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Affiliation(s)
- Yusuke Yoneda
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Bryan Kudisch
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Shahnawaz R. Rather
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Margherita Maiuri
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Yutaka Nagasawa
- Department of Applied Chemistry, College of Life Sciences, Ritsumeikan University, 1-1-1 Nojihigashi, Kusatsu 525-8577, Japan
| | - Gregory D Scholes
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Hiroshi Miyasaka
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
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15
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Arpin PC, Turner DB. Signatures of Vibrational and Electronic Quantum Beats in Femtosecond Coherence Spectra. J Phys Chem A 2021; 125:2425-2435. [PMID: 33724844 PMCID: PMC8023717 DOI: 10.1021/acs.jpca.0c10807] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Indexed: 11/29/2022]
Abstract
Femtosecond laser pulses can produce oscillatory signals in transient-absorption spectroscopy measurements. The quantum beats are often studied using femtosecond coherence spectra (FCS), the Fourier domain amplitude, and phase profiles at individual oscillation frequencies. In principle, one can identify the mechanism that gives rise to each quantum-beat signal by comparing its measured FCS to those arising from microscopic models. To date, however, most measured FCS deviate from the ubiquitous harmonic oscillator model. Here, we expand the inventory of models to which the measured spectra can be compared. We develop quantum-mechanical models of the fundamental, overtone, and combination-band FCS arising from harmonic potentials, the FCS of anharmonic potentials, and the FCS of a purely electronic dimer. This work solidifies the use of FCS for identifying electronic coherences that can arise in measurements of molecular aggregates including photosynthetic proteins. Furthermore, future studies can use the derived expressions to fit the measured FCS and thereby extract microscopic parameters of molecular potential-energy surfaces.
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Affiliation(s)
- Paul C. Arpin
- Department
of Physics, California State University,
Chico, Chico, California 95929, United States
| | - Daniel B. Turner
- Micron
School for Materials Science and Engineering, Boise State University, Boise, Idaho 83725, United States
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16
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Aster A, Bornhof AB, Sakai N, Matile S, Vauthey E. Lifetime Broadening and Impulsive Generation of Vibrational Coherence Triggered by Ultrafast Electron Transfer. J Phys Chem Lett 2021; 12:1052-1057. [PMID: 33470820 DOI: 10.1021/acs.jpclett.0c03641] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The absorption band shape of chromophores in liquid solution at room temperature is usually dominated by pure electronic dephasing dynamics, which occurs on the sub-100 fs time scale. Herein, we report on a series of dyads consisting of a naphthalenediimide (NDI) electron acceptor with one or two phenyl-based donors for which photoinduced intramolecular electron transfer is fast enough to be competitive with pure electronic dephasing. As a consequence, the absorption band of the π-π* transition of these dyads is broader than that of the NDI alone to an extent that scales with the electron transfer rate. Additionally, this reaction is so fast that it leads to the impulsive excitation of a low-frequency vibrational mode of the charge-separated product. Quantum-chemical calculations suggest that this vibration involves the C-N donor-acceptor bond, which shortens considerably upon electron transfer.
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Affiliation(s)
- Alexander Aster
- Department of Physical Chemistry, University of Geneva, CH-1211 Geneva, Switzerland
| | - Anna-Bea Bornhof
- Department of Organic Chemistry, University of Geneva, CH-1211 Geneva, Switzerland
| | - Naomi Sakai
- Department of Organic Chemistry, University of Geneva, CH-1211 Geneva, Switzerland
| | - Stefan Matile
- Department of Organic Chemistry, University of Geneva, CH-1211 Geneva, Switzerland
| | - Eric Vauthey
- Department of Physical Chemistry, University of Geneva, CH-1211 Geneva, Switzerland
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17
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Rather SR, Fu B, Kudisch B, Scholes GD. Interplay of vibrational wavepackets during an ultrafast electron transfer reaction. Nat Chem 2021; 13:70-76. [PMID: 33288893 DOI: 10.1038/s41557-020-00607-9] [Citation(s) in RCA: 41] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Accepted: 11/10/2020] [Indexed: 01/05/2023]
Abstract
Electron transfer reactions facilitate energy transduction and photoredox processes in biology and chemistry. Recent findings show that molecular vibrations can enable the dramatic acceleration of some electron transfer reactions, and control it by suppressing and enhancing reaction paths. Here, we report ultrafast spectroscopy experiments and quantum dynamics simulations that resolve how quantum vibrations participate in an electron transfer reaction. We observe ballistic electron transfer (~30 fs) along a reaction coordinate comprising high-frequency promoting vibrations. Along another vibrational coordinate, the system becomes impulsively out of equilibrium as a result of the electron transfer reaction. This leads to the generation (by the electron transfer reaction, not the laser pulse) of a new vibrational coherence along this second reaction coordinate in a mode associated with the reaction product. These results resolve a complex reaction trajectory composed of multiple vibrational coordinates that, like a sequence of ratchets, progressively diminish the recurrence of the reactant state.
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Affiliation(s)
| | - Bo Fu
- Department of Chemistry, Princeton University, Princeton, NJ, USA
| | - Bryan Kudisch
- Department of Chemistry, Princeton University, Princeton, NJ, USA
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18
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Zhu R, Zou J, Wang Z, Chen H, Weng Y. Electronic State-Resolved Multimode-Coupled Vibrational Wavepackets in Oxazine 720 by Two-Dimensional Electronic Spectroscopy. J Phys Chem A 2020; 124:9333-9342. [PMID: 33136407 DOI: 10.1021/acs.jpca.0c06559] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
The difference between the excited- and ground-state vibrational wavepackets remains to be fully explored when multiple vibrational modes are coherently excited simultaneously by femtosecond pulses. In this work, we present a series of one- and two-dimensional electronic spectroscopy for studying multimode wavepackets of oxazine 720 in solution. Fourier transform (FT) maps combined with time-frequency transform (TFT) are employed to unambiguously distinguish the origin of low-frequency vibrational wavepackets, that is, an excited-state vibrational wavepacket of 586 cm-1 with a dephasing time of 0.7 ps and a ground-state vibrational wavepacket of 595 cm-1 with a dephasing time of 1.3-1.7 ps. We also found the additional low-frequency vibrational wavepackets resulting from the coupling of the 595 cm-1 mode to a series of high-frequency modes centered at 1150 cm-1 via electronic transitions. The combined use of FT maps and TFT analysis allows us to reveal the potential vibrational coupling of wavepackets and offers the possibility of disentangling the coupling between the electronic and vibrational degrees of freedom in condensed-phase systems.
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Affiliation(s)
- Ruidan Zhu
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jiading Zou
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhuan Wang
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
| | - Hailong Chen
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China.,Songshan Lake Materials Laboratory, Dongguan, Guangdong 523808, China
| | - Yuxiang Weng
- Beijing National Laboratory for Condensed Matter Physics, Laboratory of Soft Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China.,Songshan Lake Materials Laboratory, Dongguan, Guangdong 523808, China
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19
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20
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Mewes L, Ingle RA, Megow S, Böhnke H, Baranoff E, Temps F, Chergui M. Ultrafast Intersystem Crossing and Structural Dynamics of [Pt(ppy)(μ- tBu 2pz)] 2. Inorg Chem 2020; 59:14643-14653. [PMID: 32677823 DOI: 10.1021/acs.inorgchem.0c00902] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Intersystem crossing (ISC) rates of transition-metal complexes are determined by the complex interplay of a molecule's electronic and structural dynamics. To broaden our understanding of these key factors, we investigate the case of the prototypical d8-d8 dimetal complex [Pt(ppy)(μ-tBu2pz)]2 using broad-band transient absorption anisotropy in combination with ultrafast fluorescence up-conversion and ab initio calculations. We find that, upon excitation of the molecule's metal-metal-to-ligand charge-transfer transition, ISC occurs in hundreds of femtoseconds from the lowest excited singlet state S1 to the triplet state T2, from where the energy relaxes to the lowest energy triplet state T1. ISC to the T2 state, rather than T1, is further rationalized through supporting arguments. Observed vibrational coherences along the Pt-Pt mode are attributed to the formation of nuclear wavepackets on the ground and excited electronic states that dephase prior to ISC because of the structural flexibility of the complex. Beyond demonstrating the relationship between the energy relaxation and structural dynamics of [Pt(ppy)(μ-tBu2pz)]2, our results provide new insights into the photoinduced dynamics of d8-d8 dimetal complexes more generally.
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Affiliation(s)
- Lars Mewes
- Laboratoire de spectroscopie ultrarapide and Lausanne Centre for Ultrafast Spectroscopy, Ecole Polytechnique Fédérale de Lausanne, ISIC, FSB Station 6, Lausanne CH-1015, Switzerland
| | - Rebecca A Ingle
- Laboratoire de spectroscopie ultrarapide and Lausanne Centre for Ultrafast Spectroscopy, Ecole Polytechnique Fédérale de Lausanne, ISIC, FSB Station 6, Lausanne CH-1015, Switzerland
| | - Sebastian Megow
- Institut für Physikalische Chemie, Christian-Albrechts-Universität zu Kiel, Olshausenstrasse 40, Kiel D-24098, Germany
| | - Hendrik Böhnke
- Institut für Physikalische Chemie, Christian-Albrechts-Universität zu Kiel, Olshausenstrasse 40, Kiel D-24098, Germany
| | - Etienne Baranoff
- School of Chemistry, University of Birmingham, Edgbaston, Birmingham B15 2TT, United Kingdom
| | - Friedrich Temps
- Institut für Physikalische Chemie, Christian-Albrechts-Universität zu Kiel, Olshausenstrasse 40, Kiel D-24098, Germany
| | - Majed Chergui
- Laboratoire de spectroscopie ultrarapide and Lausanne Centre for Ultrafast Spectroscopy, Ecole Polytechnique Fédérale de Lausanne, ISIC, FSB Station 6, Lausanne CH-1015, Switzerland
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21
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Hart SM, Banal JL, Bathe M, Schlau-Cohen GS. Identification of Nonradiative Decay Pathways in Cy3. J Phys Chem Lett 2020; 11:5000-5007. [PMID: 32484350 DOI: 10.1021/acs.jpclett.0c01201] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Photoexcited fluorescent markers are extensively used in spectroscopy, imaging, and analysis of biological systems. The performance of fluorescent markers depends on high levels of emission, which are limited by competing nonradiative decay pathways. Small-molecule fluorescent dyes have been increasingly used as markers due to their high and stable emission. Despite their prevalence, the nonradiative decay pathways of these dyes have not been determined. Here, we investigate these pathways for a widely used indocarbocyanine dye, Cy3, using transient grating spectroscopy. We identify a nonradiative decay pathway via a previously unknown dark state formed within ∼1 ps of photoexcitation. Our experiments, in combination with electronic structure calculations, suggest that the generation of the dark state is mediated by picosecond vibrational mode coupling, likely via a conical intersection. We further identify the vibrational modes, and thus structural elements, responsible for the formation and dynamics of the dark state, providing insight into suppressing nonradiative decay pathways in fluorescent markers such as Cy3.
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Affiliation(s)
- Stephanie M Hart
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - James L Banal
- Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Mark Bathe
- Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Gabriela S Schlau-Cohen
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
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22
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Palacino-González E, Gelin MF, Domcke W. Analysis of transient-absorption pump-probe signals of nonadiabatic dissipative systems: “Ideal” and “real” spectra. J Chem Phys 2019; 150:204102. [DOI: 10.1063/1.5094485] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - Maxim F. Gelin
- Department of Chemistry, Technische Universität München, D-85747 Garching, Germany
| | - Wolfgang Domcke
- Department of Chemistry, Technische Universität München, D-85747 Garching, Germany
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23
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Carbery WP, Pinto-Pacheco B, Buccella D, Turner DB. Resolving the Fluorescence Quenching Mechanism of an Oxazine Dye Using Ultrabroadband Two-Dimensional Electronic Spectroscopy. J Phys Chem A 2019; 123:5072-5080. [DOI: 10.1021/acs.jpca.9b03632] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- William P. Carbery
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Brismar Pinto-Pacheco
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Daniela Buccella
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Daniel B. Turner
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
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24
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25
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Rather SR, Scholes GD. From Fundamental Theories to Quantum Coherences in Electron Transfer. J Am Chem Soc 2019; 141:708-722. [PMID: 30412671 DOI: 10.1021/jacs.8b09059] [Citation(s) in RCA: 71] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Photoinduced electron transfer (ET) is a cornerstone of energy transduction from light to chemistry. The past decade has seen tremendous advances in the possible role of quantum coherent effects in the light-initiated energy and ET processes in chemical, biological, and materials systems. The prevalence of such coherence effects holds a promise to increase the efficiency and robustness of transport even in the face of energetic or structural disorder. A primary motive of this Perspective is to work out how to think about "coherence" in ET reactions. We will discuss how the interplay of basic parameters governing ET reactions-like electronic coupling, interactions with the environment, and intramolecular high-frequency quantum vibrations-impact coherences. This includes revisiting the insights from the seminal work on the theory of ET and time-resolved measurements on coherent dynamics to explore the role of coherences in ET reactions. We conclude by suggesting that in addition to optical spectroscopies, validating the functional role of coherences would require simultaneous mapping of correlated electron motion and atomically resolved nuclear structure.
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Affiliation(s)
- Shahnawaz R. Rather
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Gregory D Scholes
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
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26
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Jumper CC, van Stokkum IHM, Mirkovic T, Scholes GD. Vibronic Wavepackets and Energy Transfer in Cryptophyte Light-Harvesting Complexes. J Phys Chem B 2018; 122:6328-6340. [PMID: 29847127 DOI: 10.1021/acs.jpcb.8b02629] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Determining the key features of high-efficiency photosynthetic energy transfer remains an ongoing task. Recently, there has been evidence for the role of vibronic coherence in linking donor and acceptor states to redistribute oscillator strength for enhanced energy transfer. To gain further insights into the interplay between vibronic wavepackets and energy-transfer dynamics, we systematically compare four structurally related phycobiliproteins from cryptophyte algae by broad-band pump-probe spectroscopy and extend a parametric model based on global analysis to include vibrational wavepacket characterization. The four phycobiliproteins isolated from cryptophyte algae are two "open" structures and two "closed" structures. The closed structures exhibit strong exciton coupling in the central dimer. The dominant energy-transfer pathway occurs on the subpicosecond timescale across the largest energy gap in each of the proteins, from central to peripheral chromophores. All proteins exhibit a strong 1585 cm-1 coherent oscillation whose relative amplitude, a measure of vibronic intensity borrowing from resonance between donor and acceptor states, scales with both energy-transfer rates and damping rates. Central exciton splitting may aid in bringing the vibronically linked donor and acceptor states into better resonance resulting in the observed doubled rate in the closed structures. Several excited-state vibrational wavepackets persist on timescales relevant to energy transfer, highlighting the importance of further investigation of the interplay between electronic coupling and nuclear degrees of freedom in studies on high-efficiency photosynthesis.
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Affiliation(s)
- Chanelle C Jumper
- Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada.,Department of Chemistry , Princeton University , Washington Road , Princeton , New Jersey 08544 , United States
| | - Ivo H M van Stokkum
- LaserLaB, Department of Physics and Astronomy , Vrije Universiteit Amsterdam , De Boelelaan 1081 , 1081 HV Amsterdam , The Netherlands
| | - Tihana Mirkovic
- Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada
| | - Gregory D Scholes
- Department of Chemistry , University of Toronto , 80 St. George Street , Toronto , Ontario M5S 3H6 , Canada.,Department of Chemistry , Princeton University , Washington Road , Princeton , New Jersey 08544 , United States
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27
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Rather SR, Bezdek MJ, Koch M, Chirik PJ, Scholes GD. Ultrafast Photophysics of a Dinitrogen-Bridged Molybdenum Complex. J Am Chem Soc 2018; 140:6298-6307. [PMID: 29719149 DOI: 10.1021/jacs.8b00890] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Among the many metal-dinitrogen complexes synthesized, the end-on bridging (μ2, η1, η1-N2) coordination mode is notoriously unreactive for nitrogen fixation. This is principally due to the large activation energy for ground-state nitrogen-element bond formation and motivates exploration of the photoexcited reactivity of this coordination mode. To provide the foundation for this concept, the photophysics of a dinitrogen-bridged molybdenum complex was explored by ultrafast electronic spectroscopies. The complex absorbs light from the UV to near-IR, and the transitions are predominantly of metal-to-ligand charge transfer (MLCT) character. Five excitation wavelengths (440, 520, 610, 730, and 1150 nm) were employed to access MLCT bands, and the dynamics were probed between 430 and 1600 nm. Despite the large energy space occupied by electronic states (ca. 1.2 eV), the dynamics were independent of the excitation wavelength. In the proposed kinetic model, photoexcitation from a Mo-N═N-Mo centered ground state populates the π*-state delocalized over two terpyridine ligands. Due to a large terpyridine-terpyridine spatial separation, electronic localization occurs within 100 fs, augmented by symmetry breaking. The subsequent interplay of internal conversion and intersystem crossing (ISC) populates the lowest 3MLCT state in 2-3 ps. Decay to the ground state occurs either directly or via a thermally activated metal-centered (3MC) trap state having two time constants (10-15 ps, 23-26 ps [298 K]; 103 ps, 612 ps [77 K]). ISC between 1MLCT and 3MLCT involves migration of energized electron density from the terpyridine π* orbitals to the Mo-N═N-Mo core. Implication of the observed dynamics for the potential N-H bond forming reactivity are discussed.
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Affiliation(s)
- Shahnawaz R Rather
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Máté J Bezdek
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Marius Koch
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Paul J Chirik
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
| | - Gregory D Scholes
- Frick Chemistry Laboratory , Princeton University , Princeton , New Jersey 08544 , United States
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28
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Lee Y, Das S, Malamakal RM, Meloni S, Chenoweth DM, Anna JM. Ultrafast Solvation Dynamics and Vibrational Coherences of Halogenated Boron-Dipyrromethene Derivatives Revealed through Two-Dimensional Electronic Spectroscopy. J Am Chem Soc 2017; 139:14733-14742. [PMID: 28945085 PMCID: PMC6598204 DOI: 10.1021/jacs.7b08558] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Boron-dipyrromethene (BODIPY) chromophores have a wide range of applications, spanning areas from biological imaging to solar energy conversion. Understanding the ultrafast dynamics of electronically excited BODIPY chromophores could lead to further advances in these areas. In this work, we characterize and compare the ultrafast dynamics of halogenated BODIPY chromophores through applying two-dimensional electronic spectroscopy (2DES). Through our studies, we demonstrate a new data analysis procedure for extracting the dynamic Stokes shift from 2DES spectra revealing an ultrafast solvent relaxation. In addition, we extract the frequency of the vibrational modes that are strongly coupled to the electronic excitation, and compare the results of structurally different BODIPY chromophores. We interpret our results with the aid of DFT calculations, finding that structural modifications lead to changes in the frequency, identity, and magnitude of Franck-Condon active vibrational modes. We attribute these changes to differences in the electron density of the electronic states of the structurally different BODIPY chromophores.
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Affiliation(s)
- Yumin Lee
- University of Pennsylvania , 231 South 34 Street, Philadelphia, Pennsylvania 19104, United States
| | - Saptaparna Das
- University of Pennsylvania , 231 South 34 Street, Philadelphia, Pennsylvania 19104, United States
| | - Roy M Malamakal
- University of Pennsylvania , 231 South 34 Street, Philadelphia, Pennsylvania 19104, United States
| | - Stephen Meloni
- University of Pennsylvania , 231 South 34 Street, Philadelphia, Pennsylvania 19104, United States
| | - David M Chenoweth
- University of Pennsylvania , 231 South 34 Street, Philadelphia, Pennsylvania 19104, United States
| | - Jessica M Anna
- University of Pennsylvania , 231 South 34 Street, Philadelphia, Pennsylvania 19104, United States
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Kowalewski M, Fingerhut BP, Dorfman KE, Bennett K, Mukamel S. Simulating Coherent Multidimensional Spectroscopy of Nonadiabatic Molecular Processes: From the Infrared to the X-ray Regime. Chem Rev 2017; 117:12165-12226. [DOI: 10.1021/acs.chemrev.7b00081] [Citation(s) in RCA: 81] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Markus Kowalewski
- Department
of Chemistry and Department of Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
| | - Benjamin P. Fingerhut
- Max-Born-Institut für Nichtlineare Optik und Kurzzeitspektroskopie, D-12489 Berlin, Germany
| | - Konstantin E. Dorfman
- State
Key Laboratory of Precision Spectroscopy, East China Normal University, Shanghai 200062, China
| | - Kochise Bennett
- Department
of Chemistry and Department of Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
| | - Shaul Mukamel
- Department
of Chemistry and Department of Physics and Astronomy, University of California, Irvine, California 92697-2025, United States
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30
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van Stokkum IHM, Jumper CC, Snellenburg JJ, Scholes GD, van Grondelle R, Malý P. Estimation of damped oscillation associated spectra from ultrafast transient absorption spectra. J Chem Phys 2017; 145:174201. [PMID: 27825230 DOI: 10.1063/1.4966196] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
When exciting a complex molecular system with a short optical pulse, all chromophores present in the system can be excited. The resulting superposition of electronically and vibrationally excited states evolves in time, which is monitored with transient absorption spectroscopy. We present a methodology to resolve simultaneously the contributions of the different electronically and vibrationally excited states from the complete data. The evolution of the excited states is described with a superposition of damped oscillations. The amplitude of a damped oscillation cos(ωnt)exp(-γnt) as a function of the detection wavelength constitutes a damped oscillation associated spectrum DOASn(λ) with an accompanying phase characteristic φn(λ). In a case study, the cryptophyte photosynthetic antenna complex PC612 which contains eight bilin chromophores was excited by a broadband optical pulse. Difference absorption spectra from 525 to 715 nm were measured until 1 ns. The population dynamics is described by four lifetimes, with interchromophore equilibration in 0.8 and 7.5 ps. We have resolved 24 DOAS with frequencies between 130 and 1649 cm-1 and with damping rates between 0.9 and 12 ps-1. In addition, 11 more DOAS with faster damping rates were necessary to describe the "coherent artefact." The DOAS contains both ground and excited state features. Their interpretation is aided by DOAS analysis of simulated transient absorption signals resulting from stimulated emission and ground state bleach.
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Affiliation(s)
- Ivo H M van Stokkum
- Institute for Lasers, Life and Biophotonics, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Chanelle C Jumper
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Joris J Snellenburg
- Institute for Lasers, Life and Biophotonics, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Gregory D Scholes
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA
| | - Rienk van Grondelle
- Institute for Lasers, Life and Biophotonics, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Pavel Malý
- Institute for Lasers, Life and Biophotonics, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
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Kumpulainen T, Lang B, Rosspeintner A, Vauthey E. Ultrafast Elementary Photochemical Processes of Organic Molecules in Liquid Solution. Chem Rev 2016; 117:10826-10939. [DOI: 10.1021/acs.chemrev.6b00491] [Citation(s) in RCA: 249] [Impact Index Per Article: 31.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Tatu Kumpulainen
- Department of Physical Chemistry,
Sciences II, University of Geneva, 30 Quai Ernest Ansermet, CH-1211 Geneva 4, Switzerland
| | - Bernhard Lang
- Department of Physical Chemistry,
Sciences II, University of Geneva, 30 Quai Ernest Ansermet, CH-1211 Geneva 4, Switzerland
| | - Arnulf Rosspeintner
- Department of Physical Chemistry,
Sciences II, University of Geneva, 30 Quai Ernest Ansermet, CH-1211 Geneva 4, Switzerland
| | - Eric Vauthey
- Department of Physical Chemistry,
Sciences II, University of Geneva, 30 Quai Ernest Ansermet, CH-1211 Geneva 4, Switzerland
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33
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Jumper CC, Arpin PC, Turner DB, McClure SD, Rather SR, Dean JC, Cina JA, Kovac PA, Mirkovic T, Scholes GD. Broad-Band Pump-Probe Spectroscopy Quantifies Ultrafast Solvation Dynamics of Proteins and Molecules. J Phys Chem Lett 2016; 7:4722-4731. [PMID: 27934206 DOI: 10.1021/acs.jpclett.6b02237] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
In this work, we demonstrate the use of broad-band pump-probe spectroscopy to measure femtosecond solvation dynamics. We report studies of a rhodamine dye in methanol and cryptophyte algae light-harvesting proteins in aqueous suspension. Broad-band impulsive excitation generates a vibrational wavepacket that oscillates on the excited-state potential energy surface, destructively interfering with itself at the minimum of the surface. This destructive interference gives rise to a node at a certain probe wavelength that varies with time. This reveals the Gibbs free-energy changes of the excited-state potential energy surface, which equates to the solvation time correlation function. This method captures the inertial solvent response of water (∼40 fs) and the bimodal inertial response of methanol (∼40 and ∼150 fs) and reveals how protein-buried chromophores are sensitive to the solvent dynamics inside and outside of the protein environment.
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Affiliation(s)
- Chanelle C Jumper
- Department of Chemistry, University of Toronto , 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
| | - Paul C Arpin
- Department of Chemistry, University of Toronto , 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
- Department of Physics, California State University, Chico , Chico, California 95929-0202, United States
| | - Daniel B Turner
- Department of Chemistry, University of Toronto , 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
- Department of Chemistry, New York University , 100 Washington Square East, New York, New York 10003, United States
| | - Scott D McClure
- Department of Chemistry, University of Toronto , 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
| | - Shahnawaz R. Rather
- Department of Chemistry, Princeton University , Washington Road, Princeton, New Jersey 08544, United States
| | - Jacob C Dean
- Department of Chemistry, Princeton University , Washington Road, Princeton, New Jersey 08544, United States
| | - Jeffrey A Cina
- Department of Chemistry and Biochemistry, and Oregon Center for Optical, Molecular, and Quantum Science, University of Oregon , Eugene, Oregon 97403, United States
| | - Philip A Kovac
- Department of Chemistry and Biochemistry, and Oregon Center for Optical, Molecular, and Quantum Science, University of Oregon , Eugene, Oregon 97403, United States
| | - Tihana Mirkovic
- Department of Chemistry, University of Toronto , 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
| | - Gregory D Scholes
- Department of Chemistry, University of Toronto , 80 St. George Street, Toronto, Ontario M5S 3H6, Canada
- Department of Chemistry, Princeton University , Washington Road, Princeton, New Jersey 08544, United States
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Rather SR, Scholes GD. Slow Intramolecular Vibrational Relaxation Leads to Long-Lived Excited-State Wavepackets. J Phys Chem A 2016; 120:6792-9. [PMID: 27510098 DOI: 10.1021/acs.jpca.6b07796] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Broadband optical pump and compressed white light continuum probe were used to measure the transient excited-state absorption, ground-state bleach, and stimulated emission signals of cresyl violet solution in methanol. Amplitude oscillations caused by wavepacket motion in the ground and excited electronic states were analyzed. It was found that vibrational coherences in the excited state persist for more than the experimental waiting time window of 6 ps, and the strongest mode had a dephasing time constant of 2.4 ps. We hypothesize the dephasing of the wavepacket in the excited state is predominantly caused by intramolecular vibrational relaxation (IVR). Slow IVR indicates weak mode-mode coupling and therefore weak anharmonicity of the potential of this vibration. Thus, the initially prepared vibrational wavepacket in the excited state is not significantly perturbed by nonadiabatic coupling to other electronic states, and hence the diabatic and adiabatic representations of the system are essentially identical within the Born-Oppenheimer approximation. The wavepacket therefore evolves with time in an almost harmonic potential, slowly dephased by IVR and the pure vibrational decoherence. The consistency in the position of node (phase change in the wavepacket) in the excited-state absorption and stimulated emission signals without undergoing any frequency shift until the wavepacket is completely dephased conforms to the absence of any reactive internal conversion.
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Affiliation(s)
- Shahnawaz R. Rather
- Frick Chemistry Laboratory, Princeton University , Princeton, New Jersey 08544, United States
| | - Gregory D Scholes
- Frick Chemistry Laboratory, Princeton University , Princeton, New Jersey 08544, United States
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Marroux HJB, Orr-Ewing AJ. Distinguishing Population and Coherence Transfer Pathways in a Metal Dicarbonyl Complex Using Pulse-Shaped Two-Dimensional Infrared Spectroscopy. J Phys Chem B 2016; 120:4125-30. [DOI: 10.1021/acs.jpcb.6b02979] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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