1
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Sui X, Xu B, Kostko O, Yu XY. Investigation of pyruvic acid photolysis at the air-liquid interface as a source of aqueous secondary organic aerosols. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 930:172729. [PMID: 38670353 DOI: 10.1016/j.scitotenv.2024.172729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2024] [Revised: 04/22/2024] [Accepted: 04/22/2024] [Indexed: 04/28/2024]
Abstract
Pyruvic acid (PA) is a ubiquitous 2-oxocarboxylic acid in the atmosphere. Its photochemical process at the air-liquid (a-l) interface has been suggested as an important source of aqueous secondary organic aerosols. We investigated the photochemical reaction pathways of PA at the a-l interface using synchrotron-based vacuum ultraviolet single-photon ionization mass spectrometry (VUV SPI-MS) coupled with the System for Analysis at the Liquid Vacuum Interface (SALVI) microreactor. Results from mass spectral analysis and the determination of appearance energies (AEs) indicate that photolysis of PA can generate radicals, then they recombine with carboxylic acids and simple molecular oligomers. Furthermore, the preliminary products could form larger oligomers via radical reaction or esterification in the presence of hydroxyl and carboxyl functional groups. Mass spectral comparison shows that most photochemical reactions would complete within 4 h. The expanded photochemistry-driven reaction flowchart of PA is proposed based on the newly discovered products. Our results reveal that the interfacial PA photochemical reactions have different mechanisms from the bulk liquid due to the interfacial properties, such as molecular density, composition, and ion concentration. Our findings show that in situ mass spectral analysis with bright photon ionization is useful to elucidate the contribution of a-l interfacial reactions leading to aqSOA formation.
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Affiliation(s)
- Xiao Sui
- College of Geography and Environment, Shandong Normal University, Jinan 250358, China
| | - Bo Xu
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States
| | - Oleg Kostko
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States
| | - Xiao-Ying Yu
- Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, TN 37830-6136, United States.
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2
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Li M, Boothby C, Continetti RE, Grassian VH. Size-Dependent Sigmoidal Reaction Kinetics for Pyruvic Acid Condensation at the Air-Water Interface in Aqueous Microdroplets. J Am Chem Soc 2023; 145:22317-22321. [PMID: 37787586 PMCID: PMC10591466 DOI: 10.1021/jacs.3c08249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Indexed: 10/04/2023]
Abstract
The chemistry of pyruvic acid (PA) under thermal dark conditions is limited in bulk solutions, but in microdroplets it is shown to readily occur. Utilizing in situ micro-Raman spectroscopy as a probe, we investigated the chemistry of PA within aqueous microdroplets in a relative humidity- and temperature-controlled environmental cell. We found that PA undergoes a condensation reaction to yield mostly zymonic acid. Interestingly, the reaction follows a size-dependent sigmoidal kinetic profile, i.e., an induction period followed by reaction and then completion. The induction time is linearly proportional to the surface area (R2), and the maximum apparent reaction rate is proportional to the surface-to-volume ratio (1/R), showing that both the induction and reaction occur at the air-water interface. Furthermore, the droplet size is shown to be dynamic due to changes in droplet composition and re-equilibration with the relative humidity within the environmental cell as the reaction proceeds. Overall, the size-dependent sigmoidal kinetics, shown for the first time in microdroplets, demonstrates the complexity of the reaction mechanism and the importance of the air-water interface in the pyruvic acid condensation reaction.
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Affiliation(s)
- Meng Li
- Department of Chemistry and
Biochemistry, University of California San
Diego, La Jolla, California 92093, United States
| | - Christian Boothby
- Department of Chemistry and
Biochemistry, University of California San
Diego, La Jolla, California 92093, United States
| | - Robert E. Continetti
- Department of Chemistry and
Biochemistry, University of California San
Diego, La Jolla, California 92093, United States
| | - Vicki H. Grassian
- Department of Chemistry and
Biochemistry, University of California San
Diego, La Jolla, California 92093, United States
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3
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Deal A, Smith AE, Oyala KM, Campolo GH, Rugeley BE, Mose TA, Talley DL, Cooley CB, Rapf RJ. Infrared Reflection-Absorption Spectroscopy of α-Keto Acids at the Air-Water Interface: Effects of Chain Length and Headgroup on Environmentally Relevant Surfactant Films. J Phys Chem A 2023; 127:4137-4151. [PMID: 37103984 PMCID: PMC10184673 DOI: 10.1021/acs.jpca.3c01266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 04/12/2023] [Indexed: 04/28/2023]
Abstract
A variety of organic surfactants are found at air-water interfaces in natural environments, including on the surfaces of aqueous aerosols. The structure and morphology of these organic films can have profound impacts on material transfer between the gas and condensed phases, the optical properties of atmospheric aerosol, and chemical processing at air-water interfaces. Combined, these effects can have significant impacts on climate via radiative forcing, but our understanding of organic films at air-water interfaces is incomplete. Here, we examine the impact of the polar headgroup and alkyl tail length on the structure and morphology of organic monolayers at the air-water interfaces. First, we focus on the substituted carboxylic acids, α-keto acids, using Langmuir isotherms and infrared reflection absorption spectroscopy (IR-RAS) to elucidate key structures and phase behaviors of α-keto acids with a range of surface activities. We show that the structure of α-keto acids, both soluble and insoluble, at water surfaces is a compromise between van der Waals interactions of the hydrocarbon tail and hydrogen bonding interactions involving the polar headgroup. Then, we use this new data set regarding α-keto acid films at water surfaces to examine the role of the polar headgroup on organic films using a similar substituted carboxylic acid (α-hydroxystearic acid), an unsubstituted carboxylic acid (stearic acid), and an alcohol (stearyl alcohol). We show that the polar headgroup and its hydrogen bonding interactions can significantly affect the orientation of amphiphiles at air-water interfaces. Here, we provide side-by-side comparisons of Langmuir isotherms and IR-RA spectra for a set of environmentally relevant organic amphiphiles with a range of alkyl tail lengths and polar headgroup structures.
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Affiliation(s)
- Alexandra
M. Deal
- Department
of Chemistry and Cooperative Institute for Research in Environmental
Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Abigail E. Smith
- Department
of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Krista M. Oyala
- Department
of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Giovanna H. Campolo
- Department
of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Burgess E. Rugeley
- Department
of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Tim A. Mose
- Department
of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Denver L. Talley
- Department
of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Christina B. Cooley
- Department
of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Rebecca J. Rapf
- Department
of Chemistry, Trinity University, San Antonio, Texas 78212, United States
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4
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Tickner BJ, Platas-Iglesias C, Duckett SB, Angelovski G. In Situ Ternary Adduct Formation of Yttrium Polyaminocarboxylates Leads to Small Molecule Capture and Activation. Chemistry 2022; 28:e202201780. [PMID: 35853826 DOI: 10.1002/chem.202201780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Indexed: 01/07/2023]
Abstract
In this work the chemistry of yttrium complexes is exploited for small molecule capture and activation. Nuclear magnetic resonance (NMR) and density functional theory (DFT) studies were used to investigate the in situ formation of solution state ternary yttrium-acetate, yttrium-bicarbonate, and yttrium-pyruvate adducts with a range of polyaminocarboxylate chelates. These studies reveal that [Y(DO3A)(H2 O)2 ] (H3 DO3A - 1,4,7,10-tetraazacyclododecane-1,4,7-tricarboxylic acid) and [Y(EDTA)(H2 O)q ]- (H4 EDTA - ethylenediaminetetraacetic acid, q = 2 and 3) are able to form ternary adducts with bicarbonate and pyruvate. In the latter, unusual decarboxylation of pyruvate to form acetic acid and CO2 was observed and further studied using SABRE-hyperpolarised 13 C NMR (SABRE - signal amplification by reversible exchange) to provide information about the reaction timescale and lifetime of intermediates involved in this conversion. The work presented demonstrates that yttrium complexes can capture and activate small molecules, which may lead to novel and useful applications of this metal in catalysis and medical imaging.
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Affiliation(s)
- Ben J Tickner
- Centre for Hyperpolarisation in Magnetic Resonance, Department of Chemistry, University of York, Heslington, YO10 5NY, United Kingdom.,MR Neuroimaging agents, Max Planck Institute for Biological Cybernetics, Tübingen, 72076, Germany
| | - Carlos Platas-Iglesias
- Centro de Investigacións Científicas Avanzadas (CICA), Departamento de Química, Facultade de Ciencias, Universidade da Coruña, A Coruña, 15001, Spain
| | - Simon B Duckett
- Centre for Hyperpolarisation in Magnetic Resonance, Department of Chemistry, University of York, Heslington, YO10 5NY, United Kingdom
| | - Goran Angelovski
- MR Neuroimaging agents, Max Planck Institute for Biological Cybernetics, Tübingen, 72076, Germany.,Laboratory of Molecular and Cellular Neuroimaging, International Center for Primate Brain Research (ICPBR), Center for Excellence in Brain Science and Intelligence Technology (CEBSIT), Chinese Academy of Sciences (CAS), Shanghai, 200031, PR China
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5
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Miller TM, Wiens JP, Viggiano AA, Ard SG, Shuman NS. Thermal Electron Attachment to Pyruvic Acid, Thermal Detachment from the Parent Anion, and the Electron Affinity of Pyruvic Acid. J Phys Chem A 2022; 126:5545-5551. [PMID: 35951543 DOI: 10.1021/acs.jpca.2c04036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The kinetics of electron attachment to pyruvic acid (CH3COCOOH) and thermal detachment from the resulting parent anion were measured from 300-515 K using a flowing afterglow─Langmuir probe apparatus. An adiabatic electron affinity (EA) for pyruvic acid was derived, 0.84 ± 0.02 eV. Electron attachment rate constants to pyruvic acid of 2.1 × 10-8 and 1.2 × 10-8 were measured at 300 and 400 K, respectively. Rate constants at higher temperatures are less well-defined due to possible contributions from attachment to zymonic open ketone, an endemic impurity in pyruvic acid. Similarly, unimolecular detachment rates are complicated by secondary proton transfer reaction of the pyruvic acid anion with pyruvic acid to yield an 87 Da anion. The possible contributions from these chemistries are considered, and in all cases the equilibrium constant between attachment and detachment remains well-defined, allowing for determination of the EA.
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Affiliation(s)
- Thomas M Miller
- Boston College Institute for Scientific Research, Boston, Massachusetts 02549, United States
| | - Justin P Wiens
- Boston College Institute for Scientific Research, Boston, Massachusetts 02549, United States
| | - Albert A Viggiano
- Air Force Research Laboratory, Space Vehicles Directorate, Kirtland Air Force Base, Albuquerque, New Mexico 87117, United States
| | - Shaun G Ard
- Air Force Research Laboratory, Space Vehicles Directorate, Kirtland Air Force Base, Albuquerque, New Mexico 87117, United States
| | - Nicholas S Shuman
- Air Force Research Laboratory, Space Vehicles Directorate, Kirtland Air Force Base, Albuquerque, New Mexico 87117, United States
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6
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Lesnicki D, Wank V, Cyran JD, Backus EHG, Sulpizi M. Lower degree of dissociation of pyruvic acid at water surfaces than in bulk. Phys Chem Chem Phys 2022; 24:13510-13513. [PMID: 35640627 DOI: 10.1039/d2cp01293f] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Understanding the acid/base behavior of environmentally relevant organic acids is of key relevance for accurate climate modelling. Here we investigate the effect of pH on the (de)protonation state of pyruvic acid at the air-water interface and in bulk by using the analytical techniques surface-specific vibrational sum frequency generation and attenuated total reflection spectroscopy. To provide a molecular interpretation of the observed behavior, simulations are carried out using a free energy perturbation approach in combination with electronic structure-based molecular dynamics. In both the experimental and theoretical results we observe that the protonated form of pyruvic acid is preferred at the air-water interface. The increased proton affinity is the result of the specific microsolvation at the interface.
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Affiliation(s)
- Dominika Lesnicki
- Institute of Physics, Johannes Gutenberg University Mainz, Staudingerweg 7, 55099 Mainz, Germany.
| | - Veronika Wank
- University of Vienna, Faculty of Chemistry, Institute of Physical Chemistry, Währinger Straße 42, 1090 Vienna, Austria. .,University of Vienna, Vienna Doctoral School in Chemistry (DoSChem), Währinger Straße 42, 1090 Vienna, Austria
| | - Jenée D Cyran
- Department of Chemistry and Biochemistry, Baylor University, 76706 Waco, Texas, USA
| | - Ellen H G Backus
- University of Vienna, Faculty of Chemistry, Institute of Physical Chemistry, Währinger Straße 42, 1090 Vienna, Austria. .,University of Vienna, Vienna Doctoral School in Chemistry (DoSChem), Währinger Straße 42, 1090 Vienna, Austria
| | - Marialore Sulpizi
- Institute of Physics, Johannes Gutenberg University Mainz, Staudingerweg 7, 55099 Mainz, Germany. .,Department of Physics, Ruhr Universität Bochum, 44780 Bochum, Germany
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7
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Abstract
Theoretical chemists have been actively engaged for some time in processes such as ozone photodissociation, overtone photodissociation in nitric acid, pernitric acid, sulphuric acid, clusters and in small organic acids. The last of these have shown very different behaviours in the gas phase, liquid phase and importantly at the air–water interface in aqueous aerosols. The founder of molecular dynamics, B J Alder, pointed out long ago that hydrodynamic behaviour emerged when the symmetry of a random, thermalised population of hard spheres—billiard balls—was broken by a flux of energetic molecules. Despite this, efforts over two centuries to solve turbulence by finding top-down solutions to the Navier–Stokes equation have failed. It is time for theoretical chemistry to try a bottom-up solution. Gibbs free energy that drives the circulation arises from the entropy difference between the incoming low-entropy beam of visible and ultraviolet photons and the outgoing higher-entropy flux of infrared photons over the whole 4π solid angle. The role of the most energetic molecules with the highest velocities will affect the rovibrational line shapes of water, carbon dioxide and ozone in the far wings, where there is the largest effect on radiative transfer and hence on calculations of atmospheric temperature. The atmospheric state is determined by the interaction of radiation, chemistry and fluid dynamics on the microscopic scale, with propagation through the mesoscale to the macroscale. It will take theoretical chemistry to simulate that accurately. A challenging programme of research for theoretical chemistry is proposed, involving ab initio simulation by molecular dynamics of an air volume, starting in the upper stratosphere. The aim is to obtain scaling exponents for turbulence, providing a physical method for upscaling in numerical models. Turbulence affects chemistry, radiation and fluid dynamics at a fundamental, molecular level and is thus of basic concern to theoretical chemistry as it applies to the atmosphere, which consists of molecules in motion.
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8
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Kappes KJ, Deal AM, Jespersen MF, Blair SL, Doussin JF, Cazaunau M, Pangui E, Hopper BN, Johnson MS, Vaida V. Chemistry and Photochemistry of Pyruvic Acid at the Air–Water Interface. J Phys Chem A 2021; 125:1036-1049. [DOI: 10.1021/acs.jpca.0c09096] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Keaten J. Kappes
- Department of Chemistry and Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Alexandra M. Deal
- Department of Chemistry and Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Malte F. Jespersen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Sandra L. Blair
- Department of Chemistry and Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Jean-Francois Doussin
- Laboratoire Interuniversitaire des Systèmes Atmosphériques (LISA), UMR CNRS 7583, Institut Pierre Simon Laplace (IPSL), Université Paris-Est Créteil (UPEC) et Université de Paris (UP), 94010 Creteil, France
| | - Mathieu Cazaunau
- Laboratoire Interuniversitaire des Systèmes Atmosphériques (LISA), UMR CNRS 7583, Institut Pierre Simon Laplace (IPSL), Université Paris-Est Créteil (UPEC) et Université de Paris (UP), 94010 Creteil, France
| | - Edouard Pangui
- Laboratoire Interuniversitaire des Systèmes Atmosphériques (LISA), UMR CNRS 7583, Institut Pierre Simon Laplace (IPSL), Université Paris-Est Créteil (UPEC) et Université de Paris (UP), 94010 Creteil, France
| | - Brianna N. Hopper
- Department of Chemistry and Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Matthew S. Johnson
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Veronica Vaida
- Department of Chemistry and Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
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9
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Samanta BR, Fernando R, Rösch D, Reisler H, Osborn DL. Primary photodissociation mechanisms of pyruvic acid on S1: observation of methylhydroxycarbene and its chemical reaction in the gas phase. Phys Chem Chem Phys 2021; 23:4107-4119. [DOI: 10.1039/d0cp06424f] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Following S1 ← S0 excitation at 351 nm, pyruvic acid dissociates mainly into methylhydroxycarbene (MHC) and CO2. Some MHC molecules isomerize to more stable acetaldehyde and vinyl alcohol; the remaining MHC is stabilized and reacts bimolecularly.
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Affiliation(s)
- B. R. Samanta
- Department of Chemistry
- University of Southern California
- Los Angeles
- USA
| | - R. Fernando
- Department of Chemistry
- University of Southern California
- Los Angeles
- USA
| | - D. Rösch
- Combustion Research Facility
- Sandia National Laboratories
- Livermore
- USA
| | - H. Reisler
- Department of Chemistry
- University of Southern California
- Los Angeles
- USA
| | - D. L. Osborn
- Combustion Research Facility
- Sandia National Laboratories
- Livermore
- USA
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10
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Gordon BP, Lindquist GA, Crawford ML, Wren SN, Moore FG, Scatena LF, Richmond GL. Diol it up: The influence of NaCl on methylglyoxal surface adsorption and hydration state at the air–water interface. J Chem Phys 2020; 153:164705. [DOI: 10.1063/5.0017803] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Affiliation(s)
- Brittany P. Gordon
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, USA
- Department of Chemistry, University of California, Irvine, 1214 Natural Sciences II, Irvine, California 92697, USA
| | - Grace A. Lindquist
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, USA
| | - Michael L. Crawford
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, USA
| | - Sumi N. Wren
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, USA
- Environment and Climate Change Canada (ECCC), Air Quality Research Division, 4905 Dufferin Street, Toronto, Ontario M3H 5T4, Canada
| | - Frederick G. Moore
- Department of Physics, Whitman College, Walla Walla, Washington 99362, USA
| | - Lawrence F. Scatena
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, USA
| | - Geraldine L. Richmond
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, USA
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11
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Rios AC, Bera PP, Moreno JA, Cooper G. Pyruvate Aldol Condensation Product: A Metabolite That Escaped Synthetic Preparation for Over a Century. ACS OMEGA 2020; 5:15063-15068. [PMID: 32637778 PMCID: PMC7330906 DOI: 10.1021/acsomega.0c00877] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Accepted: 05/27/2020] [Indexed: 06/11/2023]
Abstract
The homoaldol condensation product of pyruvate, 2-methyl-4-oxopent-2-enedioic acid (OMPD), has been recently implicated as a catabolic intermediate in the bacterial degradation of lignin and previously identified from other biological sources in reports ranging over 60 years. Yet, while a preparation of the pyruvate homoaldol product precursor, 4-hydroxy-4-methyl-2-oxoglutaric acid (HMOG/Parapyruvate), was first reported in 1901, there has not been a complete published synthesis of OMPD. Analyses of reaction mixtures have helped identify zymonic acid, the lactone of HMOG, as the direct precursor to OMPD. The reaction appears to proceed through an acid- or base-mediated ring opening that does not involve formal lactone hydrolysis. In addition to a preparative protocol, we provide a proposed mechanism for the formation of methylsuccinic acid that arises from the nonoxidative decarboxylation of OMPD. Finally, we calculated the relative stability of the isomers of OMPD and found Z-OMPD to be the lowest in energy. These computations also support our observations that Z-OMPD is the most abundant isomer across a range of pH values.
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Affiliation(s)
- Andro C. Rios
- Exobiology
Branch, Space Science and Astrobiology Division, NASA Ames Research Center, Bldg N-239 Mail Stop 239-4, Moffett Field, California 94035, United States
- Blue
Marble Space Institute of Science, Seattle, Washington 98154, United States
- Center
for the Emergence of Life, NASA Ames Research
Center, Moffett Field, California 94035, United States
| | - Partha P. Bera
- Astrophysics
Branch, Space Science and Astrobiology Division, NASA Ames Research Center, Moffett
Field, California 94035, United States
- Bay
Area Environmental Research Institute, Moffett Field, California 94035, United States
| | - Jennifer A. Moreno
- Blue
Marble Space Institute of Science, Seattle, Washington 98154, United States
- Center
for the Emergence of Life, NASA Ames Research
Center, Moffett Field, California 94035, United States
| | - George Cooper
- Exobiology
Branch, Space Science and Astrobiology Division, NASA Ames Research Center, Bldg N-239 Mail Stop 239-4, Moffett Field, California 94035, United States
- Center
for the Emergence of Life, NASA Ames Research
Center, Moffett Field, California 94035, United States
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12
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Barbas R, Bofill L, de Sande D, Font-Bardia M, Prohens R. Crystal engineering of nutraceutical phytosterols: new cocrystal solid solutions. CrystEngComm 2020. [DOI: 10.1039/d0ce00704h] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
A cocrystal screening of solid solutions of three phytosterols (β-sitosterol, campesterol, stigmasterol) reveals that cocrystal solid solutions are enriched with β-sitosterol with respect to stigmasterol, a natural product with cytotoxicity concerns.
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Affiliation(s)
- Rafael Barbas
- Unitat de Polimorfisme i Calorimetria
- Centres Científics i Tecnològics
- Universitat de Barcelona
- 08028 Barcelona
- Spain
| | - Lídia Bofill
- Center for Intelligent Research in Crystal Engineering S.L
- Palma de Mallorca
- Spain
| | - Dafne de Sande
- Unitat de Polimorfisme i Calorimetria
- Centres Científics i Tecnològics
- Universitat de Barcelona
- 08028 Barcelona
- Spain
| | - Mercè Font-Bardia
- Unitat de Difracció de Raigs X
- Centres Científics i Tecnològics
- Universitat de Barcelona
- Spain
| | - Rafel Prohens
- Unitat de Polimorfisme i Calorimetria
- Centres Científics i Tecnològics
- Universitat de Barcelona
- 08028 Barcelona
- Spain
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13
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Gordon BP, Moore FG, Scatena LF, Richmond GL. On the Rise: Experimental and Computational Vibrational Sum Frequency Spectroscopy Studies of Pyruvic Acid and Its Surface-Active Oligomer Species at the Air–Water Interface. J Phys Chem A 2019; 123:10609-10619. [DOI: 10.1021/acs.jpca.9b08854] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Brittany P. Gordon
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, United States
| | - Frederick G. Moore
- Department of Physics, Whitman College, Walla Walla, Washington 99362, United States
| | - Lawrence F. Scatena
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, United States
| | - Geraldine L. Richmond
- Department of Chemistry, University of Oregon, 1253 University of Oregon, Eugene, Oregon 97403, United States
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14
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Alves MR, Fang Y, Wall KJ, Vaida V, Grassian VH. Chemistry and Photochemistry of Pyruvic Acid Adsorbed on Oxide Surfaces. J Phys Chem A 2019; 123:7661-7671. [DOI: 10.1021/acs.jpca.9b06563] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Michael R. Alves
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Yuan Fang
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Kristin J. Wall
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Veronica Vaida
- Department of Chemistry, University of Colorado, Boulder, Colorado 80309, United States
| | - Vicki H. Grassian
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
- Department of Nanoengineering and Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States
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15
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Lopalco A, Deeken R, Douglas J, Denora N, Stella VJ. Some Preformulation Studies of Pyruvic Acid and Other α-Keto Carboxylic Acids in Aqueous Solution: Pharmaceutical Formulation Implications for These Peroxide Scavengers. J Pharm Sci 2019; 108:3281-3288. [PMID: 31163186 DOI: 10.1016/j.xphs.2019.05.030] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2019] [Revised: 04/26/2019] [Accepted: 05/17/2019] [Indexed: 11/18/2022]
Abstract
The purpose of this study is to assess some of the variables determining the aldol-like condensation of pyruvic acid (1), a peroxide scavenger, in aqueous solution to parapyruvic acid and higher oligomers. Its stability is compared to 3 other α-keto carboxylic acids, 2 with sterically hindered methylene groups alpha to the keto functionality (2-3) and phenylglyoxylic acid (4) with no methylene group. High-performance liquid chromatography, nuclear magnetic resonance, and liquid chromatography mass spectroscopy techniques are used in the kinetics and product analyses. 1 condensation is concentration dependent and base catalyzed above pH 7, consistent with the reaction mechanism proceeding through the attack of the fraction of the methylene group, alpha to the keto group, in its anionic form, at the keto group of a second molecule of 1. The major product is confirmed to be parapyruvic acid, but higher-order oligomers are also observed. All 3 of the other α-keto carboxylic acids 2-4 are considerably less reactive, with 4 being completely stable. Stable solutions of 1 can be prepared by the use of relatively dilute solutions maintained at slightly acidic pH values. 1 prevents the oxidation of methionine on addition of hydrogen peroxide.
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Affiliation(s)
- Antonio Lopalco
- Department of Pharmacy - Drug Sciences, The University of Bari Aldo Moro, Bari 70125, Italy.
| | - Rodney Deeken
- Department of Pharmaceutical Chemistry, The University of Kansas, Lawrence, Kansas 66047
| | - Justin Douglas
- Nuclear Magnetic Resonance Core Laboratory, Molecular Structures Group, The University of Kansas, Lawrence, Kansas 66045
| | - Nunzio Denora
- Department of Pharmacy - Drug Sciences, The University of Bari Aldo Moro, Bari 70125, Italy
| | - Valentino J Stella
- Department of Pharmaceutical Chemistry, The University of Kansas, Lawrence, Kansas 66047
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16
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In-cell determination of Lactate Dehydrogenase Activity in a Luminal Breast Cancer Model ⁻ ex vivo Investigation of Excised Xenograft Tumor Slices Using dDNP Hyperpolarized [1- 13C]pyruvate. SENSORS 2019; 19:s19092089. [PMID: 31060334 PMCID: PMC6539471 DOI: 10.3390/s19092089] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Revised: 04/18/2019] [Accepted: 04/30/2019] [Indexed: 12/15/2022]
Abstract
[1-13C]pyruvate, the most widely used compound in dissolution-dynamic nuclear polarization (dDNP) magnetic resonance (MR), enables the visualization of lactate dehydrogenase (LDH) activity. This activity had been demonstrated in a wide variety of cancer models, ranging from cultured cells, to xenograft models, to human tumors in situ. Here we quantified the LDH activity in precision cut tumor slices (PCTS) of breast cancer xenografts. The Michigan Cancer Foundation-7 (MCF7) cell-line was chosen as a model for the luminal breast cancer type which is hormone responsive and is highly prevalent. The LDH activity, which was manifested as [1-13C]lactate production in the tumor slices, ranged between 3.8 and 6.1 nmole/nmole adenosine tri-phosphate (ATP) in 1 min (average 4.6 ± 1.0) on three different experimental set-ups consisting of arrested vs. continuous perfusion and non-selective and selective RF pulsation schemes and combinations thereof. This rate was converted to an expected LDH activity in a mass ranging between 3.3 and 5.2 µmole/g in 1 min, using the ATP level of these tumors. This indicated the likely utility of this approach in clinical dDNP of the human breast and may be useful as guidance for treatment response assessment in a large number of tumor types and therapies ex vivo.
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17
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Kouřil K, Kouřilová H, Bartram S, Levitt MH, Meier B. Scalable dissolution-dynamic nuclear polarization with rapid transfer of a polarized solid. Nat Commun 2019; 10:1733. [PMID: 30988293 PMCID: PMC6465283 DOI: 10.1038/s41467-019-09726-5] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2018] [Accepted: 03/27/2019] [Indexed: 12/02/2022] Open
Abstract
In dissolution-dynamic nuclear polarization, nuclear spins are hyperpolarized at cryogenic temperatures using radicals and microwave irradiation. The hyperpolarized solid is dissolved with hot solvent and the solution is transferred to a secondary magnet where strongly enhanced magnetic resonance signals are observed. Here we present a method for transferring the hyperpolarized solid. A bullet containing the frozen, hyperpolarized sample is ejected using pressurized helium gas, and shot into a receiving structure in the secondary magnet, where the bullet is retained and the polarized solid is dissolved rapidly. The transfer takes approximately 70 ms. A solenoid, wound along the entire transfer path ensures adiabatic transfer and limits radical-induced low-field relaxation. The method is fast and scalable towards small volumes suitable for high-resolution nuclear magnetic resonance spectroscopy while maintaining high concentrations of the target molecule. Polarization levels of approximately 30% have been observed for 1-13C-labelled pyruvic acid in solution.
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Affiliation(s)
- Karel Kouřil
- School of Chemistry, University of Southampton, Southampton, SO17 1BJ, United Kingdom.
| | - Hana Kouřilová
- School of Chemistry, University of Southampton, Southampton, SO17 1BJ, United Kingdom
| | - Samuel Bartram
- School of Chemistry, University of Southampton, Southampton, SO17 1BJ, United Kingdom
| | - Malcolm H Levitt
- School of Chemistry, University of Southampton, Southampton, SO17 1BJ, United Kingdom
| | - Benno Meier
- School of Chemistry, University of Southampton, Southampton, SO17 1BJ, United Kingdom.
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18
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Rapf R, Perkins RJ, Dooley MR, Kroll JA, Carpenter BK, Vaida V. Environmental Processing of Lipids Driven by Aqueous Photochemistry of α-Keto Acids. ACS CENTRAL SCIENCE 2018; 4:624-630. [PMID: 29806009 PMCID: PMC5968514 DOI: 10.1021/acscentsci.8b00124] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/23/2018] [Indexed: 06/08/2023]
Abstract
Sunlight can initiate photochemical reactions of organic molecules though direct photolysis, photosensitization, and indirect processes, often leading to complex radical chemistry that can increase molecular complexity in the environment. α-Keto acids act as photoinitiators for organic species that are not themselves photoactive. Here, we demonstrate this capability through the reaction of two α-keto acids, pyruvic acid and 2-oxooctanoic acid, with a series of fatty acids and fatty alcohols. We show for five different cases that a cross-product between the photoinitiated α-keto acid and non-photoactive species is formed during photolysis in aqueous solution. Fatty acids and alcohols are relatively unreactive species, which suggests that α-keto acids are able to act as radical initiators for many atmospherically relevant molecules found in the sea surface microlayer and on atmospheric aerosol particles.
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Affiliation(s)
- Rebecca
J. Rapf
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of
Colorado Boulder, Boulder, Colorado 80309, United States
| | - Russell J. Perkins
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of
Colorado Boulder, Boulder, Colorado 80309, United States
| | - Michael R. Dooley
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of
Colorado Boulder, Boulder, Colorado 80309, United States
| | - Jay A. Kroll
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of
Colorado Boulder, Boulder, Colorado 80309, United States
| | - Barry K. Carpenter
- School
of Chemistry and the Physical Organic Chemistry Centre, Cardiff University, Cardiff CF10 3AT, United
Kingdom
| | - Veronica Vaida
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of
Colorado Boulder, Boulder, Colorado 80309, United States
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19
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Vaida V, Reed Harris AE, Rapf RJ, Perkins RJ, Carpenter BK. Comment on “Reactivity of Ketyl and Acetyl Radicals from Direct Solar Actinic Photolysis of Aqueous Pyruvic Acid”. J Phys Chem A 2017; 121:8738-8740. [DOI: 10.1021/acs.jpca.7b06018] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Veronica Vaida
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Allison E. Reed Harris
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Rebecca J. Rapf
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Russell J. Perkins
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Barry K. Carpenter
- School
of Chemistry and the Physical Organic Chemistry Centre, Cardiff University, Cardiff CF10 3AT, United Kingdom
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20
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Rapf RJ, Dooley MR, Kappes K, Perkins RJ, Vaida V. pH Dependence of the Aqueous Photochemistry of α-Keto Acids. J Phys Chem A 2017; 121:8368-8379. [DOI: 10.1021/acs.jpca.7b08192] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Rebecca J. Rapf
- Department of Chemistry and
Biochemistry and Cooperative Institute for Research in Environmental
Sciences, University of Colorado, Boulder, Colorado 80309, United States
| | - Michael R. Dooley
- Department of Chemistry and
Biochemistry and Cooperative Institute for Research in Environmental
Sciences, University of Colorado, Boulder, Colorado 80309, United States
| | - Keaten Kappes
- Department of Chemistry and
Biochemistry and Cooperative Institute for Research in Environmental
Sciences, University of Colorado, Boulder, Colorado 80309, United States
| | - Russell J. Perkins
- Department of Chemistry and
Biochemistry and Cooperative Institute for Research in Environmental
Sciences, University of Colorado, Boulder, Colorado 80309, United States
| | - Veronica Vaida
- Department of Chemistry and
Biochemistry and Cooperative Institute for Research in Environmental
Sciences, University of Colorado, Boulder, Colorado 80309, United States
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21
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Rapf RJ, Perkins RJ, Carpenter BK, Vaida V. Mechanistic Description of Photochemical Oligomer Formation from Aqueous Pyruvic Acid. J Phys Chem A 2017; 121:4272-4282. [DOI: 10.1021/acs.jpca.7b03310] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Rebecca J. Rapf
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Russell J. Perkins
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Barry K. Carpenter
- School
of Chemistry and the Physical Organic Chemistry Centre, Cardiff University, Cardiff CF10 3AT, United Kingdom
| | - Veronica Vaida
- Department
of Chemistry and Biochemistry and Cooperative Institute for Research
in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
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22
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Rapf RJ, Perkins RJ, Yang H, Miyake GM, Carpenter BK, Vaida V. Photochemical Synthesis of Oligomeric Amphiphiles from Alkyl Oxoacids in Aqueous Environments. J Am Chem Soc 2017; 139:6946-6959. [PMID: 28481114 PMCID: PMC5518611 DOI: 10.1021/jacs.7b01707] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The aqueous phase photochemistry of a series of amphiphilic α-keto acids with differing linear alkyl chain lengths was investigated, demonstrating the ability of sunlight-initiated reactions to build molecular complexity under environmentally relevant conditions. We show that the photochemical reaction mechanisms for α-keto acids in aqueous solution are robust and generalizable across alkyl chain lengths. The organic radicals generated during photolysis are indiscriminate, leading to a large mixture of photoproducts that are observed using high-resolution electrospray ionization mass spectrometry, but these products are identifiable following literature photochemical mechanisms. The alkyl oxoacids under study here can undergo a Norrish Type II reaction to generate pyruvic acid, increasing the diversity of observed photoproducts. The major products of this photochemistry are covalently bonded dimers and trimers of the starting oxoacids, many of which are multi-tailed lipids. The properties of these oligomers are discussed, including their spontaneous self-assembly into aggregates.
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Affiliation(s)
- Rebecca J. Rapf
- Department of Chemistry and Biochemistry, University of Colorado Boulder, Boulder, Colorado 80309, United States
- Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Russell J. Perkins
- Department of Chemistry and Biochemistry, University of Colorado Boulder, Boulder, Colorado 80309, United States
- Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Haishen Yang
- Department of Chemistry and Biochemistry, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Garret M. Miyake
- Department of Chemistry and Biochemistry, University of Colorado Boulder, Boulder, Colorado 80309, United States
- Materials Science and Engineering Program, University of Colorado Boulder, Boulder, Colorado 80309, United States
| | - Barry K. Carpenter
- School of Chemistry and the Physical Organic Chemistry Centre, Cardiff University, Cardiff CF10 3AT, United Kingdom
| | - Veronica Vaida
- Department of Chemistry and Biochemistry, University of Colorado Boulder, Boulder, Colorado 80309, United States
- Cooperative Institute for Research in Environmental Sciences, University of Colorado Boulder, Boulder, Colorado 80309, United States
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23
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James OO, Sauter W, Schröder U. Electrochemistry for the Generation of Renewable Chemicals: One-Pot Electrochemical Deoxygenation of Xylose to δ-Valerolactone. CHEMSUSCHEM 2017; 10:2015-2022. [PMID: 28332296 DOI: 10.1002/cssc.201700209] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2017] [Revised: 03/10/2017] [Indexed: 06/06/2023]
Abstract
In this study, the electrochemical conversion of xylose to δ-valerolactone via carbonyl intermediates is demonstrated. The conversion was achieved in aqueous media and at ambient conditions. This study also demonstrates that the feedstock for production of renewable chemicals and biofuels through electrochemistry can be extended to primary carbohydrate molecules. This is the first report on a one-pot electrochemical deoxygenation of xylose to δ-valerolactone.
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Affiliation(s)
- Olusola O James
- Institute of Environmental and Sustainable Chemistry, Technical University Braunschweig, Hangenring 30, 38106, Braunschweig, Germany
- Chemistry Unit, Kwara State University, Malete, P.M.B., 1530, Ilorin, Nigeria
| | - Waldemer Sauter
- Institute of Environmental and Sustainable Chemistry, Technical University Braunschweig, Hangenring 30, 38106, Braunschweig, Germany
| | - Uwe Schröder
- Institute of Environmental and Sustainable Chemistry, Technical University Braunschweig, Hangenring 30, 38106, Braunschweig, Germany
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24
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Reed Harris AE, Pajunoja A, Cazaunau M, Gratien A, Pangui E, Monod A, Griffith EC, Virtanen A, Doussin JF, Vaida V. Multiphase Photochemistry of Pyruvic Acid under Atmospheric Conditions. J Phys Chem A 2017; 121:3327-3339. [DOI: 10.1021/acs.jpca.7b01107] [Citation(s) in RCA: 53] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Allison E. Reed Harris
- Department
of Chemistry and Biochemistry, CIRES, University of Colorado, Boulder, Colorado 80309, United States
| | - Aki Pajunoja
- Department
of Applied Physics, University of Eastern Finland, Kuopio Campus, P.O. Box 1627, 70211 Kuopio, Finland
| | - Mathieu Cazaunau
- LISA, UMR
CNRS 7583,
Université Paris Est Cretéil (UPEC), Université
Paris Diderot (UPD), Institut Pierre Simon Laplace (IPSL), 94010 Cretéil, France
| | - Aline Gratien
- LISA, UMR
CNRS 7583,
Université Paris Est Cretéil (UPEC), Université
Paris Diderot (UPD), Institut Pierre Simon Laplace (IPSL), 94010 Cretéil, France
| | - Edouard Pangui
- LISA, UMR
CNRS 7583,
Université Paris Est Cretéil (UPEC), Université
Paris Diderot (UPD), Institut Pierre Simon Laplace (IPSL), 94010 Cretéil, France
| | - Anne Monod
- Aix Marseille
Université, CNRS, LCE, 13331, Marseille, France
| | - Elizabeth C. Griffith
- Department
of Chemistry and Biochemistry, CIRES, University of Colorado, Boulder, Colorado 80309, United States
| | - Annele Virtanen
- Department
of Applied Physics, University of Eastern Finland, Kuopio Campus, P.O. Box 1627, 70211 Kuopio, Finland
| | - Jean-Francois Doussin
- LISA, UMR
CNRS 7583,
Université Paris Est Cretéil (UPEC), Université
Paris Diderot (UPD), Institut Pierre Simon Laplace (IPSL), 94010 Cretéil, France
| | - Veronica Vaida
- Department
of Chemistry and Biochemistry, CIRES, University of Colorado, Boulder, Colorado 80309, United States
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