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Khan GR, Daschakraborty S. Enhanced fluidity of water in superhydrophobic nanotubes: estimating viscosity using jump-corrected confined Stokes-Einstein approach. Phys Chem Chem Phys 2024; 26:4492-4504. [PMID: 38240480 DOI: 10.1039/d3cp05906e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2024]
Abstract
Accurately predicting the viscosity of water confined within nanotubes is vital for various technological applications. Traditional methods have failed in this regard, necessitating a novel approach. We introduced the jump-corrected confined Stokes-Einstein (JCSE) method and now employ the same to estimate the viscosity and diffusion in superhydrophobic nanotubes. Our study covers a temperature range of 230-300 K and considers three nanotube diameters. Results show that water inside superhydrophobic nanotubes exhibits a significantly lower viscosity and higher diffusion than those inside hydrophobic nanotubes. Narrower nanotubes and lower temperatures accentuate these effects. Furthermore, water inside superhydrophobic nanotubes display a lower viscosity than bulk water, with the difference increasing at lower temperatures. This reduction is attributed to weaker water-water interactions caused by a lower water density in the interfacial region. These findings highlight the importance of interfacial water density and its influence on nanotube viscosity, shedding light on nanoscale fluid dynamics and opening avenues for diverse applications.
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Affiliation(s)
- Golam Rosul Khan
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
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2
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Kumar A, Daschakraborty S. Anomalous lateral diffusion of lipids during the fluid/gel phase transition of a lipid membrane. Phys Chem Chem Phys 2023; 25:31431-31443. [PMID: 37962400 DOI: 10.1039/d3cp04081j] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2023]
Abstract
A lipid membrane undergoes a phase transition from fluid to gel phase upon changing external thermodynamic conditions, such as decreasing temperature and increasing pressure. Extremophilic organisms face the challenge of preventing this deleterious phase transition. The main focus of their adaptive strategy is to facilitate effective temperature sensing through sensor proteins, relying on the drastic changes in packing density and membrane fluidity during the phase transition. Although the changes in packing density parameters due to the fluid/gel phase transition are studied in detail, the impact on membrane fluidity is less explored in the literature. Understanding the lateral diffusive dynamics of lipids in response to temperature, particularly during the fluid/gel phase transition, is albeit crucial. Here we have simulated the phase transition of a single component lipid membrane composed of dipalmitoylphosphatidylcholine (DPPC) lipids using a coarse-grained (CG) model and studied the changes of the structural and dynamical properties. It is observed that near the phase transition point, both fluid and gel phase domains coexist together. The dynamics remains highly non-Gaussian for a long time even when the mean square displacement reaches the Fickian regime at a much earlier time. This Fickian yet non-Gaussian diffusion (FnGD) is a characteristic of a highly heterogeneous system, previously observed for the lateral diffusion of lipids in raft mimetic membranes having liquid-ordered and liquid-disordered phases co-existing together. We have analyzed the molecular trajectories and calculated the jump-diffusion of the lipids, stemming from sudden jump translations, using a translational jump-diffusion (TJD) approach. An overwhelming contribution of the jump-diffusion of the lipids is observed suggesting anomalous diffusion of lipids during fluid/gel phase transition of the membrane. These results are important in unravelling the intricate nature of lipid diffusion during the phase transition of the membrane and open up a new possibility of investigating the most significant change of membrane properties during phase transition, which can be effectively sensed by proteins.
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Affiliation(s)
- Abhay Kumar
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
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3
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Saric D, Guevara-Carrion G, Gaponenko Y, Shevtsova V, Vrabec J. Diffusion of hydrocarbons diluted in supercritical carbon dioxide. Sci Rep 2023; 13:16107. [PMID: 37752219 PMCID: PMC10522683 DOI: 10.1038/s41598-023-42892-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Accepted: 09/15/2023] [Indexed: 09/28/2023] Open
Abstract
Mutual diffusion of six hydrocarbons (methane, ethane, isobutane, benzene, toluene or naphthalene) diluted in supercritical carbon dioxide ([Formula: see text]) is studied by molecular dynamics simulation near the Widom line, i.e., in the temperature range from 290 to 345 K along the isobar 9 MPa. The [Formula: see text] + aromatics mixtures are additionally sampled at 10 and 12 MPa and an experimental database with Fick diffusion coefficient data for those systems is provided. Taylor dispersion experiments of [Formula: see text] with benzene, toluene, n-dodecane and 1,2,3,4-tetrahydronaphthalene are conducted along the [Formula: see text] 10 MPa isobar. Maxwell-Stefan and Fick diffusion coefficients are analyzed, together with the thermodynamic factor that relates them. It is found that the peculiar behavior of the Fick diffusion coefficient of some [Formula: see text] mixtures in the extended critical region is a consequence of the thermodynamic factor minimum due to pronounced clustering on the molecular scale. Further, the strong dependence of the Fick diffusion coefficient on the molecular mass of the solute as well as the breakdown of the Stokes-Einstein relation near the Widom line are confirmed. Eleven correlations for the prediction of the Fick diffusion coefficient of [Formula: see text] mixtures are assessed. An alternative two-step approach for the prediction of the infinite dilution Fick diffusion coefficient of supercritical [Formula: see text] mixtures is proposed. It requires only the state point in terms of temperature and pressure (or density) as well as the molecular solute mass as input parameters. First, entropy scaling is applied to estimate the self-diffusion coefficient of [Formula: see text]. Subsequently, this coefficient is used to determine the infinite dilution Fick diffusion coefficient of the mixture, based on the finding that these two diffusion coefficients exhibit a linear relationship, where the slope depends only on the molecular solute mass.
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Affiliation(s)
- Denis Saric
- Thermodynamics, Technical University of Berlin, Ernst-Reuter-Platz 1, 10587, Berlin, Germany
| | | | - Yury Gaponenko
- MRC, CP-165/62, Université libre de Bruxelles (ULB), Ave. F.D. Roosevelt 50, B-1050, Brussels, Belgium
| | - Valentina Shevtsova
- Fluid Mechanics Group, Faculty of Engineering, Mondragon University, 20500, Mondragon, Spain
- IKERBASQUE, Basque Foundation for Science, Plaza Euskadi 5, 48009, Bilbao, Spain
| | - Jadran Vrabec
- Thermodynamics, Technical University of Berlin, Ernst-Reuter-Platz 1, 10587, Berlin, Germany.
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Evstigneev M, Kaffashnia A. Diffusion coefficient scaling of a free Brownian particle with velocity-dependent damping. Phys Rev E 2023; 107:064129. [PMID: 37464597 DOI: 10.1103/physreve.107.064129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Accepted: 06/08/2023] [Indexed: 07/20/2023]
Abstract
An analytical expression for the diffusion coefficient D of a free Brownian particle with velocity-dependent damping γ(v) is derived from the Green-Kubo formula. A special case of damping that decreases monotonically with velocity is considered. At high temperature T, the diffusion coefficient is found to exhibit two scaling types: (i) for a power-law decrease of damping with the particle's kinetic energy, γ(v)∝1/v^{2α}, it scales as D∝T^{α+1}; (ii) for a Gaussian function γ(v), it diverges at temperatures above a critical value T_{c} and behaves as D∝1/sqrt[T_{c}-T] at T slightly below T_{c}. At T>T_{c}, the particle trajectory contains long flight events, which are not observed at T<T_{c} in case (ii) and at all temperatures in case (i).
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Affiliation(s)
- Mykhaylo Evstigneev
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's, NL, Canada A1B 3X7
| | - Amir Kaffashnia
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's, NL, Canada A1B 3X7
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5
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Viscosity decoupling does not guarantee dynamic heterogeneity: A way out. J Photochem Photobiol A Chem 2023. [DOI: 10.1016/j.jphotochem.2022.114361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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6
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Absorption of pressurized methane in normal and supercooled p-xylene revealed via high-resolution neutron imaging. Sci Rep 2023; 13:136. [PMID: 36599907 DOI: 10.1038/s41598-022-27142-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2022] [Accepted: 12/27/2022] [Indexed: 01/06/2023] Open
Abstract
Supercooling of liquids leads to peculiarities which are scarcely studied under high-pressure conditions. Here, we report the surface tension, solubility, diffusivity, and partial molar volume for normal and supercooled liquid solutions of methane with p-xylene. Liquid bodies of perdeuterated p-xylene (p-C8D10), and, for comparison, o-xylene (o-C8D10), were exposed to pressurized methane (CH4, up to 101 bar) at temperatures ranging 7.0-30.0 °C and observed at high spatial resolution (pixel size 20.3 μm) using a non-tactile neutron imaging method. Supercooling led to the increase of diffusivity and partial molar volume of methane. Solubility and surface tension were insensitive to supercooling, the latter substantially depended on methane pressure. Overall, neutron imaging enabled to reveal and quantify multiple phenomena occurring in supercooled liquid p-xylene solutions of methane under pressures relevant to the freeze-out in the production of liquefied natural gas.
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Size dependence of solute’s translational jump-diffusion in solvent: Relationship between trapping and jump-diffusion. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.140059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Dueby S, Dubey V, Indra S, Daschakraborty S. Non-monotonic composition dependence of the breakdown of Stokes-Einstein relation for water in aqueous solutions of ethanol and 1-propanol: explanation using translational jump-diffusion approach. Phys Chem Chem Phys 2022; 24:18738-18750. [PMID: 35900000 DOI: 10.1039/d2cp02664c] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of experimental and simulation studies examined the validity of the Stokes-Einstein relationship (SER) of water in binary water/alcohol mixtures of different mixture compositions. These studies revealed a strong non-monotonic composition dependence of the SER with maxima at the specific alcohol mole fraction where the non-idealities of the thermodynamic and transport properties are observed. The translational jump-diffusion (TJD) approach elucidated the breakdown of the SER in pure supercooled water as caused by the jump translation of molecules. The breakdown of SER in the supercooled water/methanol binary mixture was successfully explained using the same TJD approach. To further generalize the picture, here we focus on the non-monotonic composition dependence of SER breakdown of water in two water/alcohol mixtures (water/ethanol and water/propanol) for a broad temperature range. In agreement with previous studies, maximum breakdown of SER is observed for the mixture with alcohol mole fraction x = 0.2. Diffusion of the water molecules at the maximum SER breakdown point is largely contributed by jump-diffusion. The residual-diffusion, obtained by subtracting the jump-diffusion from the total diffusion, approximately follows the SER for different compositions and temperatures. We also performed hydrogen (H-)bond dynamics and observed that the contribution of jump-diffusion is proportional to the total free energy of activation of breaking all H-bonds that exist around a molecule. This study, therefore, suggests that the more a molecule is trapped by H-bonding, the more likely it is to diffuse through the jump-diffusion mechanism, eventually leading to an increasing degree of SER breakdown.
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Affiliation(s)
- Shivam Dueby
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
| | - Vikas Dubey
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
| | - Sandipa Indra
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
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Kaffashnia A, Evstigneev M. Scaling and universality in Brownian motion on a stochastic harmonic oscillator chain. Phys Rev E 2022; 105:064134. [PMID: 35854516 DOI: 10.1103/physreve.105.064134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Accepted: 06/15/2022] [Indexed: 11/07/2022]
Abstract
Diffusion of a Brownian particle along a stochastic harmonic oscillator chain is investigated. In contrast to the usually discussed Brownian motion driven by Gaussian white noise, the particle at high temperatures performs long Lévy flights. At high temperatures T the diffusion coefficient scales as D∼T^{2+α}, where the parameter α determine the average damping force ∝1/(T^{α}P) on the particle at large momentum P and at high temperature. The exponent α depends on the particle-chain interaction and chain properties. It is shown that the mean time t[over ¯]_{f} necessary to perform a flight of l lattice constant scales with l as t[over ¯]_{f}∝l^{2/3} at high temperatures and flight lengths. Last, the flight length probability distribution is found to decay as 1/l^{β} with the exponent β=4/3 being universal, i.e., independent of the model parameters.
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Affiliation(s)
- Amir Kaffashnia
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's, NL, A1B 3X7 Canada
| | - Mykhaylo Evstigneev
- Department of Physics and Physical Oceanography, Memorial University of Newfoundland, St. John's, NL, A1B 3X7 Canada
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Dubey V, Daschakraborty S. Translational Jump-Diffusion of Hydroxide Ion in Anion Exchange Membrane: Deciphering the Nature of Vehicular Diffusion. J Phys Chem B 2022; 126:2430-2440. [PMID: 35294202 DOI: 10.1021/acs.jpcb.2c00240] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Earlier, ab initio and reactive force-field-based molecular dynamics (MD) simulation studies suggested an overwhelming contribution of the vehicular diffusion in the total diffusion of hydroxide ions rather than structural diffusion. But does the vehicular diffusion occur via small-step displacement? This question is important to have an understanding of the real characteristics of vehicular diffusion. To answer this question, we perform a classical molecular dynamics simulation of a system containing a hydroxide ion exchange membrane polymer and hydroxide ion at different hydration levels and temperatures using the same molecular force field (Dubey, V. Chem. Phys. Lett. 2020, 755, 137802), which successfully captured the microscopic structure and dynamics of the system. We use the translational jump-diffusion approach, used previously in supercooled water for understanding the origin of breakdown of the Stokes-Einstein relation, to calculate the jump-diffusion coefficient of hydroxide ion and water in the anion exchange membrane. We have seen a significant role of hydration level and temperature in the mechanism of vehicular diffusion. In overhydrated membrane, both hydroxide ions and water molecules diffuse via both small- and large-step displacement. With decreasing hydration level and temperature, the diffusion is increasingly governed by the jump-diffusion mechanism. The larger contribution of jump-diffusion comes from the stronger caging of the diffusing species by the solvent at lower hydration levels and temperature. These results, therefore, suggest that the hydration level and temperature of the hydroxide ion exchange membrane determine the detailed mechanism of the vehicular diffusion of hydroxide ion, especially whether the diffusion follows hydrodynamics or not.
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Affiliation(s)
- Vikas Dubey
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India
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Das S, Singha PK, Singh AK, Datta A. The Role of Hydrogen Bonding in the Preferential Solvation of 5-Aminoquinoline in Binary Solvent Mixtures. J Phys Chem B 2021; 125:12763-12773. [PMID: 34709811 DOI: 10.1021/acs.jpcb.1c06208] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
5-Aminoquinoline (5AQ) has been used as a fluorescent probe of preferential solvation (PS) in binary solvent mixtures in which the nonpolar component is diethyl ether and the polar component is protic (methanol) or aprotic (acetonitrile). Hence, the roles of solvent polarity and solute-solvent hydrogen bonding have been delineated. Positive deviations of spectral shifts from a linear dependence on the concentration of the polar component, signifying PS, are markedly more pronounced in case of the protic solvent. Solvation dynamics on a nanosecond time scale mark the formation of the solvation shell around the fluorescent probe. Time-resolved area-normalized emission spectra indicate the occurrence of the continuous solvation of the excited state when the polar component is acetonitrile. In contrast, two distinct states were observed when the polar component was methanol, the second state being the hydrogen bonded one. Translational diffusion is the rate-determining step for formation of the solvation shell. The time constant associated with it has been estimated from rise times observed in fluorescence transients monitored at the red end of the fluorescence spectra and also from the time evolution of the spectral width of time-resolved emission spectra.
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Affiliation(s)
- Sharmistha Das
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai 400076, India
| | - Prajit Kumar Singha
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai 400076, India
| | - Avinash Kumar Singh
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai 400076, India
| | - Anindya Datta
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai 400076, India
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Dubey V, Dueby S, Daschakraborty S. Breakdown of the Stokes-Einstein relation in supercooled water: the jump-diffusion perspective. Phys Chem Chem Phys 2021; 23:19964-19986. [PMID: 34515269 DOI: 10.1039/d1cp02202d] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Although water is the most ubiquitous liquid it shows many thermodynamic and dynamic anomalies. Some of the anomalies further intensify in the supercooled regime. While many experimental and theoretical studies have focused on the thermodynamic anomalies of supercooled water, fewer studies explored the dynamical anomalies very extensively. This is due to the intricacy of the experimental measurement of the dynamical properties of supercooled water. Violation of the Stokes-Einstein relation (SER), an important relation connecting the diffusion of particles with the viscosity of the medium, is one of the major dynamical anomalies. In absence of experimentally measured viscosity, researchers used to check the validity of SER indirectly using average translational relaxation time or α-relaxation time. Very recently, the viscosity of supercooled water was accurately measured at a wide range of temperatures and pressures. This allowed direct verification of the SER at different temperature-pressure thermodynamic state points. An increasing breakdown of the SER was observed with decreasing temperature. Increasing pressure reduces the extent of breakdown. Although some well-known theories explained the above breakdown, a detailed molecular mechanism was still elusive. Recently, a translational jump-diffusion (TJD) approach has been able to quantitatively explain the breakdown of the SER in pure supercooled water and an aqueous solution of methanol. The objective of this article is to present a detailed and state-of-the-art analysis of the past and present works on the breakdown of SER in supercooled water with a specific focus on the new TJD approach for explaining the breakdown of the SER.
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Affiliation(s)
- Vikas Dubey
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
| | - Shivam Dueby
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
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Indra S, Subramanian R, Daschakraborty S. Interaction of volatile organic compounds acetone and toluene with room temperature ionic liquid at the bulk and the liquid-vacuum interface. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.115608] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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