1
|
Zaytseva YV, Surovtsev NV. Raman scattering in protonated and deuterated 1,2-dipalmitoyl-sn-glycero-3-phosphatidylcholine (DPPC): Indicators of conformational and lateral orders. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2022; 267:120583. [PMID: 34782267 DOI: 10.1016/j.saa.2021.120583] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2021] [Revised: 11/01/2021] [Accepted: 11/02/2021] [Indexed: 06/13/2023]
Abstract
The use of deuterocarbons is an effective method in the Raman spectroscopy of multicomponent lipid materials and biological samples. Here, Raman spectra of hydrated multilamellar vesicles of 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC), its deuterated analog 1,2-dipalmitoyl-d62-sn-glycero-3-phosphocholine (DPPCd62), and DPPC-DPPCd62 mixtures were studied in a wide temperature range to specify the Raman indicators of conformational and lateral orders. The temperature dependence of the 985 cm-1 line in the deuterated phospholipid unequivocally indicates that this line corresponds to the CC stretching vibrations of deuterated hydrocarbon chains in the all-trans conformation. It was also concluded that the ratio of Raman intensities at the maximum of the peak of the symmetric CD2 stretching and at a maximum near 2168 cm-1 reflects the conformational order of the hydrocarbon chain and can be used for an evaluation of the fraction of the all-trans sequences. The frequency of the symmetric CD2 stretching peak is sensitive to the phase state (gel or fluid) but has a low sensitivity to the partial conformational disordering within the gel phase. The Raman study of DPPC-DPPCd62 mixtures reveals that the lateral order contributes to the ratio of intensities of the antisymmetric and symmetric CH2 stretching peaks as a prefactor enhancing the effect of conformational ordering.
Collapse
Affiliation(s)
- Yu V Zaytseva
- Institute of Automation and Electrometry, Russian Academy of Sciences, Novosibirsk 630090, Russia
| | - N V Surovtsev
- Institute of Automation and Electrometry, Russian Academy of Sciences, Novosibirsk 630090, Russia.
| |
Collapse
|
2
|
Action of Mechanical Forces on Polymerization and Polymers. Polymers (Basel) 2022; 14:polym14030604. [PMID: 35160593 PMCID: PMC8839360 DOI: 10.3390/polym14030604] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Revised: 01/28/2022] [Accepted: 01/31/2022] [Indexed: 02/01/2023] Open
Abstract
In this review, we summarize recent developments in the field of the mechanochemistry of polymers. The aim of the review is to consider the consequences of mechanical forces and actions on polymers and polymer synthesis. First, we review classical works on chemical reactions and polymerization processes under strong shear deformations. Then, we analyze two emerging directions of research in mechanochemistry—the role of mechanophores and, for the first time, new physical phenomena, accompanying external impulse mechanical actions on polymers. Mechanophores have been recently proposed as sensors of fatigue and cracks in polymers and composites. The effects of the high-pressure pulsed loading of polymers and composites include the Dzyaloshinskii–Moriya effect, emission of superradiation and the formation of metal nanoparticles. These effects provide deeper insight into the mechanism of chemical reactions under shear deformations and pave the way for further research in the interests of modern technologies.
Collapse
|
3
|
Lozano H, Millan-Solsona R, Blanco-Cabra N, Fabregas R, Torrents E, Gomila G. Electrical properties of outer membrane extensions from Shewanella oneidensis MR-1. NANOSCALE 2021; 13:18754-18762. [PMID: 34747424 DOI: 10.1039/d1nr04689f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Shewanella oneidensis MR-1 is a metal-reducing bacterium that is able to exchange electrons with solid-phase minerals outside the cell. These bacterial cells can produce outer membrane extensions (OMEs) that are tens of nanometers wide and several microns long. The capability of these OMEs to transport electrons is currently under investigation. Tubular chemically fixed OMEs from S. oneidensis have shown good dc conducting properties when measured in an air environment. However, no direct demonstration of the conductivity of the more common bubble-like OMEs has been provided yet, due to the inherent difficulties in measuring it. In the present work, we measured the electrical properties of bubble-like OMEs in a dry air environment by Scanning Dielectric Microscopy (SDM) in force detection mode. We found that at the frequency of the measurements (∼2 kHz), OMEs show an insulating behavior, with an equivalent homogeneous dielectric constant εOME = 3.7 ± 0.7 and no dephasing between the applied ac voltage and the measured ac electric force. The dielectric constant measured for the OMEs is comparable to that obtained for insulating supramolecular protein structures (εprotein = 3-4), pointing towards a rich protein composition of the OMEs, probably coming from the periplasm. Based on the detection sensitivity of the measuring instrument, the upper limit for the ac longitudinal conductivity of bubble-like OMEs in a dry air environment has been set to σOME,ac < 10-5 S m-1, a value several orders of magnitude smaller than the dc conductivity measured in tubular chemically fixed OMEs. The lack of conductivity of bubble-like OMEs can be attributed to the relatively large separation between cytochromes in these larger OMEs and to the suppression of cytochrome mobility due to the dry environmental conditions.
Collapse
Affiliation(s)
- Helena Lozano
- Nanoscale bioelectric characterization, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain.
| | - Ruben Millan-Solsona
- Nanoscale bioelectric characterization, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain.
- Departament d'Enginyeria Electrònica i Biomèdica, Universitat de Barcelona, c/Martí i Franqués 1, 08028, Barcelona, Spain
| | - Nuria Blanco-Cabra
- Bacterial infections and antimicrobial therapies, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain
| | - Rene Fabregas
- Department of Physics and Astronomy, University of Manchester, Manchester M13 9PL, UK
| | - Eduard Torrents
- Bacterial infections and antimicrobial therapies, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain
- Departament de Genètica, Microbiologia i Estadística, Universitat de Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain
| | - Gabriel Gomila
- Nanoscale bioelectric characterization, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain.
- Departament d'Enginyeria Electrònica i Biomèdica, Universitat de Barcelona, c/Martí i Franqués 1, 08028, Barcelona, Spain
| |
Collapse
|
4
|
Checa M, Millan-Solsona R, Mares AG, Pujals S, Gomila G. Fast Label-Free Nanoscale Composition Mapping of Eukaryotic Cells Via Scanning Dielectric Force Volume Microscopy and Machine Learning. SMALL METHODS 2021; 5:e2100279. [PMID: 34928004 DOI: 10.1002/smtd.202100279] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Revised: 04/28/2021] [Indexed: 06/14/2023]
Abstract
Mapping the biochemical composition of eukaryotic cells without the use of exogenous labels is a long-sought objective in cell biology. Recently, it has been shown that composition maps on dry single bacterial cells with nanoscale spatial resolution can be inferred from quantitative nanoscale dielectric constant maps obtained with the scanning dielectric microscope. Here, it is shown that this approach can also be applied to the much more challenging case of fixed and dry eukaryotic cells, which are highly heterogeneous and show micrometric topographic variations. More importantly, it is demonstrated that the main bottleneck of the technique (the long computation times required to extract the nanoscale dielectric constant maps) can be shortcut by using supervised neural networks, decreasing them from weeks to seconds in a wokstation computer. This easy-to-use data-driven approach opens the door for in situ and on-the-fly label free nanoscale composition mapping of eukaryotic cells with scanning dielectric microscopy.
Collapse
Affiliation(s)
- Martí Checa
- Nanoscale Bioelectrical Characterization Group, Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute of Science and Technology (BIST), Carrer Baldiri i Reixac 11-15, Barcelona, 08028, Spain
| | - Ruben Millan-Solsona
- Nanoscale Bioelectrical Characterization Group, Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute of Science and Technology (BIST), Carrer Baldiri i Reixac 11-15, Barcelona, 08028, Spain
- Departament d'Enginyeria Electrònica i Biomèdica, Universitat de Barcelona, Carrer Martí i Franquès 1, Barcelona, 08028, Spain
| | - Adrianna Glinkowska Mares
- Nanoscopy for Nanomedicine Group, Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute of Science and Technology (BIST), Carrer Baldiri i Reixac 11-15, Barcelona, 08028, Spain
| | - Silvia Pujals
- Departament d'Enginyeria Electrònica i Biomèdica, Universitat de Barcelona, Carrer Martí i Franquès 1, Barcelona, 08028, Spain
- Nanoscopy for Nanomedicine Group, Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute of Science and Technology (BIST), Carrer Baldiri i Reixac 11-15, Barcelona, 08028, Spain
| | - Gabriel Gomila
- Nanoscale Bioelectrical Characterization Group, Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute of Science and Technology (BIST), Carrer Baldiri i Reixac 11-15, Barcelona, 08028, Spain
- Departament d'Enginyeria Electrònica i Biomèdica, Universitat de Barcelona, Carrer Martí i Franquès 1, Barcelona, 08028, Spain
| |
Collapse
|
5
|
Di Muzio M, Millan-Solsona R, Dols-Perez A, Borrell JH, Fumagalli L, Gomila G. Dielectric properties and lamellarity of single liposomes measured by in-liquid scanning dielectric microscopy. J Nanobiotechnology 2021; 19:167. [PMID: 34082783 PMCID: PMC8176598 DOI: 10.1186/s12951-021-00912-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Accepted: 05/25/2021] [Indexed: 12/31/2022] Open
Abstract
Liposomes are widely used as drug delivery carriers and as cell model systems. Here, we measure the dielectric properties of individual liposomes adsorbed on a metal electrode by in-liquid scanning dielectric microscopy in force detection mode. From the measurements the lamellarity of the liposomes, the separation between the lamellae and the specific capacitance of the lipid bilayer can be obtained. As application we considered the case of non-extruded DOPC liposomes with radii in the range ~ 100-800 nm. Uni-, bi- and tri-lamellar liposomes have been identified, with the largest population corresponding to bi-lamellar liposomes. The interlamellar separation in the bi-lamellar liposomes is found to be below ~ 10 nm in most instances. The specific capacitance of the DOPC lipid bilayer is found to be ~ 0.75 µF/cm2 in excellent agreement with the value determined on solid supported planar lipid bilayers. The lamellarity of the DOPC liposomes shows the usual correlation with the liposome's size. No correlation is found, instead, with the shape of the adsorbed liposomes. The proposed approach offers a powerful label-free and non-invasive method to determine the lamellarity and dielectric properties of single liposomes.
Collapse
Affiliation(s)
- Martina Di Muzio
- Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain
| | - Ruben Millan-Solsona
- Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain.,Departament D'Enginyeria Electrònica I Biomèdica, Universitat de Barcelona, C/Martí i Franqués 1, 08028, Barcelona, Spain
| | - Aurora Dols-Perez
- Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain
| | - Jordi H Borrell
- Secció de Fisicoquímica, Facultat de Farmàcia I Ciències de L'Alimentació, Universitat de Barcelona, Av. Diagonal, 643, 08028, Barcelona, Spain
| | - Laura Fumagalli
- Department of Physics and Astronomy, University of Manchester, Manchester, M13 9PL, UK.,National Graphene Institute, University of Manchester, Manchester, M13 9PL, UK
| | - Gabriel Gomila
- Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri i Reixac 11-15, 08028, Barcelona, Spain. .,Departament D'Enginyeria Electrònica I Biomèdica, Universitat de Barcelona, C/Martí i Franqués 1, 08028, Barcelona, Spain.
| |
Collapse
|
6
|
Checa M, Millan-Solsona R, Glinkowska Mares A, Pujals S, Gomila G. Dielectric Imaging of Fixed HeLa Cells by In-Liquid Scanning Dielectric Force Volume Microscopy. NANOMATERIALS (BASEL, SWITZERLAND) 2021; 11:1402. [PMID: 34070690 PMCID: PMC8226567 DOI: 10.3390/nano11061402] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Revised: 05/21/2021] [Accepted: 05/23/2021] [Indexed: 01/16/2023]
Abstract
Mapping the dielectric properties of cells with nanoscale spatial resolution can be an important tool in nanomedicine and nanotoxicity analysis, which can complement structural and mechanical nanoscale measurements. Recently we have shown that dielectric constant maps can be obtained on dried fixed cells in air environment by means of scanning dielectric force volume microscopy. Here, we demonstrate that such measurements can also be performed in the much more challenging case of fixed cells in liquid environment. Performing the measurements in liquid media contributes to preserve better the structure of the fixed cells, while also enabling accessing the local dielectric properties under fully hydrated conditions. The results shown in this work pave the way to address the nanoscale dielectric imaging of living cells, for which still further developments are required, as discussed here.
Collapse
Affiliation(s)
- Martí Checa
- Nanoscale Bioelectric Characterization, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri I Reixac 11-15, 08028 Barcelona, Spain;
| | - Ruben Millan-Solsona
- Nanoscale Bioelectric Characterization, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri I Reixac 11-15, 08028 Barcelona, Spain;
- Departament d’Enginyeria Electrònica i Biomèdica, Universitat de Barcelona, c/Martí i Franquès 1, 08028 Barcelona, Spain;
| | - Adrianna Glinkowska Mares
- Nanoscopy for Nanomedicine, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri I Reixac 11-15, 08028 Barcelona, Spain;
| | - Silvia Pujals
- Departament d’Enginyeria Electrònica i Biomèdica, Universitat de Barcelona, c/Martí i Franquès 1, 08028 Barcelona, Spain;
- Nanoscopy for Nanomedicine, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri I Reixac 11-15, 08028 Barcelona, Spain;
| | - Gabriel Gomila
- Nanoscale Bioelectric Characterization, Institut de Bioenginyeria de Catalunya (IBEC), The Barcelona Institute of Science and Technology (BIST), c/Baldiri I Reixac 11-15, 08028 Barcelona, Spain;
- Departament d’Enginyeria Electrònica i Biomèdica, Universitat de Barcelona, c/Martí i Franquès 1, 08028 Barcelona, Spain;
| |
Collapse
|
7
|
Martínez‐Tong DE, Pomposo JA, Verde‐Sesto E. Triggering Forces at the Nanoscale: Technologies for Single‐Chain Mechanical Activation and Manipulation. Macromol Rapid Commun 2020; 42:e2000654. [DOI: 10.1002/marc.202000654] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Revised: 11/14/2020] [Indexed: 01/05/2023]
Affiliation(s)
- Daniel E. Martínez‐Tong
- Departamento de Polímeros y Materiales Avanzados: Física, Química y Tecnología University of the Basque Country (UPV/EHU) P. Manuel Lardizábal 3 Donostia‐San Sebastián 20018 Spain
- Centro de Física de Materiales (UPV/EHU‐CSIC) P. Manuel Lardizábal 5 San Sebastián 20018 Spain
| | - José A. Pomposo
- Departamento de Polímeros y Materiales Avanzados: Física, Química y Tecnología University of the Basque Country (UPV/EHU) P. Manuel Lardizábal 3 Donostia‐San Sebastián 20018 Spain
- Centro de Física de Materiales (CFM) (CSIC‐UPV/EHU)—Materials Physics Center (MPC) Paseo Manuel de Lardizábal 5 Donostia‐San Sebastián 20018 Spain
- IKERBASQUE—Basque Foundation for Science Plaza Euskadi 5 Bilbao 48009 Spain
| | - Ester Verde‐Sesto
- Centro de Física de Materiales (CFM) (CSIC‐UPV/EHU)—Materials Physics Center (MPC) Paseo Manuel de Lardizábal 5 Donostia‐San Sebastián 20018 Spain
| |
Collapse
|