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Vaidya AJ, Rammohan M, Lee YH, Lee KZ, Chou CY, Hartley Z, Scott CA, Susler RG, Wang L, Loesch-Fries LS, Harris MT, Solomon KV. Engineering Alkaline-Stable Barley Stripe Mosaic Virus-Like Particles for Efficient Surface Modification. Biochem Eng J 2023; 199:109062. [PMID: 37692450 PMCID: PMC10486258 DOI: 10.1016/j.bej.2023.109062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/12/2023]
Abstract
Viruses and virus-like particles are powerful templates for materials synthesis because of their capacity for precise protein engineering and diverse surface functionalization. We recently developed a recombinant bacterial expression system for the production of barley stripe mosaic virus-like particles (BSMV VLPs). However, the applicability of this biotemplate was limited by low stability in alkaline conditions and a lack of chemical handles for ligand attachment. Here, we identify and validate novel residues in the BSMV Caspar carboxylate clusters that mediate virion disassembly through repulsive interactions at high pH. Point mutations of these residues to create attractive interactions that increase rod length ~2 fold, with an average rod length of 91 nm under alkaline conditions. To enable diverse chemical surface functionalization, we also introduce reactive lysine residues at the C-terminus of BSMV coat protein, which is presented on the VLP surface. Chemical conjugation reactions with this lysine proceed more quickly under alkaline conditions. Thus, our alkaline-stable VLP mutants are more suitable for rapid surface functionalization of long nanorods. This work validates novel residues involved in BSMV VLP assembly and demonstrates the feasibility of chemical functionalization of BSMV VLPs for the first time, enabling novel biomedical and chemical applications.
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Affiliation(s)
- Akash J. Vaidya
- 150 Academy St, Department of Chemical & Biomolecular Engineering, University of Delaware, Newark, DE, 19716, USA
| | - Mruthula Rammohan
- 150 Academy St, Department of Chemical & Biomolecular Engineering, University of Delaware, Newark, DE, 19716, USA
| | - Yu-Hsuan Lee
- 480 Stadium Mall Drive, School of Chemical Engineering, Purdue University, West Lafayette, IN 47907, United States
| | - Kok Zhi Lee
- 225 South University Street, Agricultural & Biological Engineering, Purdue University, West Lafayette, IN 47907-2093, United States
- 1203 West State Street, Bindley Bioscience Center, Purdue University, West Lafayette, IN 47906, United States
| | - Che-yu Chou
- 480 Stadium Mall Drive, School of Chemical Engineering, Purdue University, West Lafayette, IN 47907, United States
| | - Zachary Hartley
- 915 West State Street, Plant Genetics, Breeding and Biotechnology Program, Department of Agronomy, Purdue University, West Lafayette, IN 47907, United States
| | - Corren A. Scott
- 480 Stadium Mall Drive, School of Chemical Engineering, Purdue University, West Lafayette, IN 47907, United States
| | - Rachel G. Susler
- 480 Stadium Mall Drive, School of Chemical Engineering, Purdue University, West Lafayette, IN 47907, United States
| | - Longfei Wang
- 915 West State Street, Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN 47907, United States
| | - L. Sue Loesch-Fries
- 915 West State Street, Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN 47907, United States
| | - Michael T. Harris
- 480 Stadium Mall Drive, School of Chemical Engineering, Purdue University, West Lafayette, IN 47907, United States
| | - Kevin V. Solomon
- 150 Academy St, Department of Chemical & Biomolecular Engineering, University of Delaware, Newark, DE, 19716, USA
- 225 South University Street, Agricultural & Biological Engineering, Purdue University, West Lafayette, IN 47907-2093, United States
- 1203 West State Street, Bindley Bioscience Center, Purdue University, West Lafayette, IN 47906, United States
- 500 Central Drive, Laboratory of Renewable Resources Engineering (LORRE), Purdue University, West Lafayette, IN, 47907-2022, United States
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Basnayake Pussepitiyalage V, Hemmati S. Sustainable, Green, and Continuous Synthesis of Fivefold Palladium Nanorods Using l-Ascorbic Acid in a Segmented Millifluidic Flow Reactor. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:4200-4212. [PMID: 35352559 DOI: 10.1021/acs.langmuir.1c03133] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Pd nanorods (PdNRs) have recently come to attention due to their wide array of applications. The green synthesis of PdNR with a relatively high yield and high aspect ratio is challenging. A continuous millifluidic flow reactor (CMFR) has been explored to precisely control mass and heat transfer as well as mixing in the PdNR synthesis processes. CMFRs demonstrate a few drawbacks, such as the presence of parabolic velocity profile in the laminar flow of the reaction solution, causing uneven axial residence time distribution. The CMFRs are likely to show irreversible fouling, which may cause the product quality to deteriorate or result in the channel being clogged. These shortcomings can be avoided or minimized using a segmented millifluidic flow reactor (SMFR) that consists of the solution forming a train of individual segments in another inert medium. This study explores the use of a sustainable reducing agent (l-ascorbic acid) in the presence of potassium bromide (KBr) as the capping agent and poly(vinyl pyrrolidone) (PVP) as the stabilizing agent for PdNR synthesis in an SMFR employing compartmentalized flow of a reaction solution, in which liquid segments consisting of a reaction solution will be immersed in the steam generated by boiling of the solvent water. The effect of reaction parameters such as reagent concentration has been studied on the size and morphology of synthesized Pd nanostructures. A kinetic study has been conducted to calculate the rate of reduction that can be used as a quantitative measure for manipulation of the type and relative concentration of initially formed seeds. It has been shown that the initial reduction rate during the first 45 min of residence time of the millifluidic reactor is about 66% faster compared to the rest of the reaction. A filtration procedure has been utilized to separate Pd nanostructures other than nanorods synthesized in the SMFR.
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Affiliation(s)
| | - Shohreh Hemmati
- Department of Chemical Engineering, Oklahoma State University, Stillwater, Oklahoma 74078, United States
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Lee KZ, Basnayake Pussepitiyalage V, Lee YH, Loesch-Fries LS, Harris MT, Hemmati S, Solomon KV. Engineering Tobacco Mosaic Virus and Its Virus-Like-Particles for Synthesis of Biotemplated Nanomaterials. Biotechnol J 2021; 16:e2000311. [PMID: 33135368 DOI: 10.1002/biot.202000311] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Revised: 10/27/2020] [Indexed: 12/12/2022]
Abstract
Biomolecules are increasingly attractive templates for the synthesis of functional nanomaterials. Chief among them is the plant tobacco mosaic virus (TMV) due to its high aspect ratio, narrow size distribution, diverse biochemical functionalities presented on the surface, and compatibility with a number of chemical conjugations. These properties are also easily manipulated by genetic modification to enable the synthesis of a range of metallic and non-metallic nanomaterials for diverse applications. This article reviews the characteristics of TMV and related viruses, and their virus-like particle (VLP) derivatives, and how these may be manipulated to extend their use and function. A focus of recent efforts has been on greater understanding and control of the self-assembly processes that drive biotemplate formation. How these features have been exploited in engineering applications such as, sensing, catalysis, and energy storage are briefly outlined. While control of VLP surface features is well-established, fewer tools exist to control VLP self-assembly, which limits efforts to control template uniformity and synthesis of certain templated nanomaterials. However, emerging advances in synthetic biology, machine learning, and other fields promise to accelerate efforts to control template uniformity and nanomaterial synthesis enabling more widescale industrial use of VLP-based biotemplates.
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Affiliation(s)
- Kok Zhi Lee
- Agricultural & Biological Engineering, Purdue University, 225 S University St, West Lafayette, IN, 47907, USA
| | | | - Yu-Hsuan Lee
- School of Chemical Engineering, Purdue University, 480 W Stadium Ave, West Lafayette, IN, 47907, USA
| | - L Sue Loesch-Fries
- Department of Botany and Plant Pathology, Purdue University, 915 W State St, West Lafayette, IN, 47907, USA
| | - Michael T Harris
- School of Chemical Engineering, Purdue University, 480 W Stadium Ave, West Lafayette, IN, 47907, USA
| | - Shohreh Hemmati
- School of Chemical Engineering, Oklahoma State University, 420 Engineering North, Stillwater, OK, 74078, USA
| | - Kevin V Solomon
- Agricultural & Biological Engineering, Purdue University, 225 S University St, West Lafayette, IN, 47907, USA
- Laboratory of Renewable Resources Engineering (LORRE), Purdue University, 500 Central Drive, West Lafayette, IN, 47907, USA
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Kaabipour S, Hemmati S. A review on the green and sustainable synthesis of silver nanoparticles and one-dimensional silver nanostructures. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2021; 12:102-136. [PMID: 33564607 PMCID: PMC7849236 DOI: 10.3762/bjnano.12.9] [Citation(s) in RCA: 45] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Accepted: 12/14/2020] [Indexed: 05/08/2023]
Abstract
The significance of silver nanostructures has been growing considerably, thanks to their ubiquitous presence in numerous applications, including but not limited to renewable energy, electronics, biosensors, wastewater treatment, medicine, and clinical equipment. The properties of silver nanostructures, such as size, size distribution, and morphology, are strongly dependent on synthesis process conditions such as the process type, equipment type, reagent type, precursor concentration, temperature, process duration, and pH. Physical and chemical methods have been among the most common methods to synthesize silver nanostructures; however, they possess substantial disadvantages and short-comings, especially compared to green synthesis methods. On the contrary, the number of green synthesis techniques has been increasing during the last decade and they have emerged as alternative routes towards facile and effective synthesis of silver nanostructures with different morphologies. In this review, we have initially outlined the most common and popular chemical and physical methodologies and reviewed their advantages and disadvantages. Green synthesis methodologies are then discussed in detail and their advantages over chemical and physical methods have been noted. Recent studies are then reviewed in detail and the effects of essential reaction parameters, such as temperature, pH, precursor, and reagent concentration, on silver nanostructure size and morphology are discussed. Also, green synthesis techniques used for the synthesis of one-dimensional (1D) silver nanostructures have been reviewed, and the potential of alternative green reagents for their synthesis has been discussed. Furthermore, current challenges regarding the green synthesis of 1D silver nanostructures and future direction are outlined. To sum up, we aim to show the real potential of green nanotechnology towards the synthesis of silver nanostructures with various morphologies (especially 1D ones) and the possibility of altering current techniques towards more environmentally friendly, more energy-efficient, less hazardous, simpler, and cheaper procedures.
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Affiliation(s)
- Sina Kaabipour
- School of Chemical Engineering, Oklahoma State University, Stillwater, Oklahoma, 74078, USA
| | - Shohreh Hemmati
- School of Chemical Engineering, Oklahoma State University, Stillwater, Oklahoma, 74078, USA
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Sun L, Cai J, Sun Y, Zhang D. Three-dimensional assembly of silver nanoparticles spatially confined by cellular structure of Spirulina, from nanospheres to nanosheets. NANOTECHNOLOGY 2019; 30:495704. [PMID: 31469089 DOI: 10.1088/1361-6528/ab3ee7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Three-dimensional (3D) ordered construction of nanoparticles (NPs) has attracted much attention in wide applications, however, techniques with respect to cost effective nanofabrication of well defined functional architectures is still lacking. To address this specific issue, a bio-interface confinement approach is proposed that precisely replicates the complex cellular structural features of microbes and integrates silver NP (SNP) building blocks into their 3D framework in a precise, low cost and mass production way. Herein, the SNPs with nanospheres and nanosheets structure were synthesized by way of electroless deposition using Spirulina as template. Results showed that SNPs were orderly assembled along the cellular structure, and the spatially confinement of cellular texture induced the transformation of SNPs from sphere to flake morphology during their continuous growth. The silver assembly not only shows good antibacterial activity, but also exhibits excellent surface enhanced Raman scattering (SERS) performance with the enhancement factor as high as 5.95 × 108 and good recuperability towards Rhodamine 6G. The fascinating SERS performance can be ascribed to the combined action of nanosheets morphology of SNPs, hierarchical nanostructure of the cellular structure, and the small interparticle spacing. This strategy provides an effective strategy for controllable and ordered 3D assembly of NPs by using the cellular texture.
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Affiliation(s)
- Lili Sun
- School of Mechanical Engineering and Automation, Beihang University, Beijing 100191, People's Republic of China
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Wang X, Xiao Y, Hao H, Zhang Y, Xu X, Tang R. Therapeutic Potential of Biomineralization‐Based Engineering. ADVANCED THERAPEUTICS 2018. [DOI: 10.1002/adtp.201800079] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Xiaoyu Wang
- Qiushi Academy for Advanced StudiesZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Yun Xiao
- Center for Biomaterials and Biopathways, Department of ChemistryZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Haibin Hao
- Center for Biomaterials and Biopathways, Department of ChemistryZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Ying Zhang
- Center for Biomaterials and Biopathways, Department of ChemistryZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Xurong Xu
- Qiushi Academy for Advanced StudiesZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Ruikang Tang
- Qiushi Academy for Advanced StudiesZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
- Center for Biomaterials and Biopathways, Department of ChemistryZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
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Zhang C, Gao Y, Yang N, You T, Chen H, Yin P. Direct determination of the tumor marker AFP via silver nanoparticle enhanced SERS and AFP-modified gold nanoparticles as capturing substrate. Mikrochim Acta 2018; 185:90. [PMID: 29594421 DOI: 10.1007/s00604-017-2652-y] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2017] [Accepted: 12/29/2017] [Indexed: 01/25/2023]
Abstract
The authors describe a rapid and direct SERS-based immunoassay for the determination of AFP, an important marker for diagnosis of hepatocellular carcinoma. Silver nanoparticles (AgNPs; 36 nm i.d.) serve as a support to immobilize antibody and as a SERS intensifier, and AFP-modified gold nanoparticles are employed as capturing substrate. Direct and quantitative detection of AFP is accomplished with a limit detection as low as 5 ng·mL-1. Compared to assays based on the use of metal nanoparticles, the use of gold-silver nanoparticle heterodimers as an active SERS substrate can save costs because only a single antibody is required. Moreover, the high selectivity and good linear relationship of detecting AFP in fetal bovine serum indicates its potential applicability for the direct analysis of clinical samples. Graphical abstract Direct and quantitative determination of AFP antigen utilizing SERS has been was successfully presented and applied to detect alpha fetoprotein antigen in fetal bovine serum with detection limit of 2 ng•mL-1.
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Affiliation(s)
- Chenmeng Zhang
- Key Laboratory of Bio- inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing, 100191, China
| | - Yukun Gao
- Key Laboratory of Bio- inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing, 100191, China
| | - Nan Yang
- Key Laboratory of Bio- inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing, 100191, China
| | - Tingting You
- Key Laboratory of Bio- inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing, 100191, China
| | - Huaxiang Chen
- Key Laboratory of Bio- inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing, 100191, China
| | - Penggang Yin
- Key Laboratory of Bio- inspired Smart Interfacial Science and Technology of Ministry of Education, School of Chemistry, Beihang University, Beijing, 100191, China.
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Freeman A. Protein-Mediated Biotemplating on the Nanoscale. Biomimetics (Basel) 2017; 2:E14. [PMID: 31105177 PMCID: PMC6352702 DOI: 10.3390/biomimetics2030014] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2017] [Revised: 07/18/2017] [Accepted: 08/01/2017] [Indexed: 12/26/2022] Open
Abstract
Purified proteins offer a homogeneous population of biological nanoparticles, equipped in many cases with specific binding sites enabling the directed self-assembly of envisaged one-, two- or three-dimensional arrays. These arrays may serve as nanoscale biotemplates for the preparation of novel functional composite materials, which exhibit potential applications, especially in the fields of nanoelectronics and optical devices. This review provides an overview of the field of protein-mediated biotemplating, focussing on achievements made throughout the past decade. It is comprised of seven sections designed according to the size and configuration of the protein-made biotemplate. Each section describes the design and size of the biotemplate, the resulting hybrid structures, the fabrication methodology, the analytical tools employed for the structural analysis of the hybrids obtained, and, finally, their claimed/intended applications and a feasibility demonstration (whenever available). In conclusion, a short assessment of the overall status of the achievements already made vs. the future challenges of this field is provided.
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Affiliation(s)
- Amihay Freeman
- Department of Molecular Microbiology and Biotechnology, Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel.
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