1
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Zhu W, Obara H. Flow structure of okra mucilage in rotating wall vessel system. Heliyon 2024; 10:e36149. [PMID: 39262968 PMCID: PMC11388502 DOI: 10.1016/j.heliyon.2024.e36149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 08/07/2024] [Accepted: 08/10/2024] [Indexed: 09/13/2024] Open
Abstract
The rotating-wall vessel (RWV) bioreactor, a 3D suspension culture system, faces challenges related to non-uniform tissue growth during the incubation of bone and heart tissues. Okra mucilage, an extract from okra pods with non-Newtonian rheological properties, has shown potential as a plasma replacement agent and has no induced cytotoxic effects. In this study, we investigated the flow structure of okra mucilage in rotating wall vessel system. By modifying the RWV and adding okra mucilage, we analyzed the flow structure using a high-speed camera and particle image velocimetry (PIV). Our results showed that okra mucilage creates a concentric circle-shaped rigid-like rotation at all rotation speeds (1-50 rpm). The high viscosity of okra mucilage resulted in a low terminal velocity for microparticles and quick response to rotational movements. These findings suggest that okra mucilage has the potential to enhance the uniformity of tissue growth in RWV systems by stabilizing the flow structure and reducing microparticle sedimentation.
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Affiliation(s)
- Weijun Zhu
- Tokyo Metropolitan University, Minamiosaw 1-1, Hachioji 192-0397, Tokyo, Japan
| | - Hiromichi Obara
- Tokyo Metropolitan University, Minamiosaw 1-1, Hachioji 192-0397, Tokyo, Japan
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2
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Ohkuma T, Hagita K, Murashima T, Deguchi T. Miscibility and exchange chemical potential of ring polymers in symmetric ring-ring blends. SOFT MATTER 2023; 19:3818-3827. [PMID: 37191220 DOI: 10.1039/d3sm00108c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Generally, differences of polymer topologies may affect polymer miscibility even with the same repeated units. In this study, the topological effect of ring polymers on miscibility was investigated by comparing symmetric ring-ring and linear-linear polymer blends. To elucidate the topological effect of ring polymers on mixing free energy, the exchange chemical potential of binary blends was numerically evaluated as a function of composition ϕ by performing semi-grand canonical Monte Carlo and molecular dynamics simulations of a bead-spring model. For ring-ring blends, an effective miscibility parameter was evaluated by comparing the exchange chemical potential with that of the Flory-Huggins model for linear-linear polymer blends. It was confirmed that in the mixed states satisfying χN > 0, ring-ring blends are more miscible and stable than the linear-linear blends with the same molecular weight. Furthermore, we investigated finite molecular weight dependence on the miscibility parameter, which reflected the statistical probability of interchain interactions in the blends. The simulation results revealed that the molecular weight dependence on the miscibility parameter was smaller in ring-ring blends. The effect of the ring polymers on miscibility was verified to be consistent with the change in the interchain radial distribution function. In ring-ring blends, it was indicated that the topology affected miscibility by reducing the effect of the direct interaction between the components of the blends.
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Affiliation(s)
- Takahiro Ohkuma
- Digital Engineering Division, Bridgestone Corporation, Kodaira, 187-8531, Japan.
| | - Katsumi Hagita
- Department of Applied Physics, National Defense Academy, 1-10-20, Hashirimizu, Yokosuka, 239-8686, Japan
| | - Takahiro Murashima
- Department of Physics, Tohoku University, 6-3, Aramaki-aza-Aoba, Aoba-ku, Sendai, 980-8578, Japan
| | - Tetsuo Deguchi
- Department of Physics, Faculty of Core Research, Ochanomizu University, 2-1-1 Ohtsuka, Bunkyo-ku, Tokyo 112-8610, Japan
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3
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Hsieh MC, Tsao YH, Sheng YJ, Tsao HK. Microstructural Dynamics of Polymer Melts during Stretching: Radial Size Distribution. Polymers (Basel) 2023; 15:polym15092067. [PMID: 37177214 PMCID: PMC10181331 DOI: 10.3390/polym15092067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2023] [Revised: 04/24/2023] [Accepted: 04/24/2023] [Indexed: 05/15/2023] Open
Abstract
The transient elongational viscosity ηe(t) of the polymer melt is known to exhibit strain hardening, which depends on the strain rate ε˙. This phenomenon was elucidated by the difference of chain stretching in the entanglement network between extension and shear. However, to date, the microscopic evolution of polymer melt has not been fully statistically analyzed. In this work, the radial size distributions P(Rg,t) of linear polymers are explored by dissipative particle dynamics during the stretching processes. In uniaxial extensional flow, it is observed that the mean radius of gyration R¯g(t) and standard deviation σ(t) remain unchanged until the onset of strain hardening, corresponding to linear viscoelasticity. Both R¯g and σ rise rapidly in the non-linear regime, and bimodal size distribution can emerge. Moreover, the onset of strain hardening is found to be insensitive to the Hencky strain (ε˙Ht) and chain length (N).
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Affiliation(s)
- Ming-Chang Hsieh
- Department of Chemical Engineering, National Taiwan University, Taipei 106, Taiwan
| | - Yu-Hao Tsao
- Department of Chemical Engineering, National Taiwan University, Taipei 106, Taiwan
| | - Yu-Jane Sheng
- Department of Chemical Engineering, National Taiwan University, Taipei 106, Taiwan
| | - Heng-Kwong Tsao
- Department of Chemical and Materials Engineering, National Central University, Jhongli 320, Taiwan
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4
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Zhu J, Liu S, Lu Y, Cheng H, Han X, Liu L, Meng L, Yu W, Cui K, Li L. A versatile biaxial stretching device for in situ synchrotron radiation small- and wide-angle x-ray scattering measurements of polymer films. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2023; 94:023906. [PMID: 36859001 DOI: 10.1063/5.0130284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 01/28/2023] [Indexed: 06/18/2023]
Abstract
A biaxial stretching device is designed and developed for the real-time structural measurements of polymer films. This device adopts a vertical layout to perform real-time x-ray scattering measurements. It has a maximum stretching ratio of 8 × 8 in two perpendicular directions. Its maximum experimental temperature and stretching rate are 250 °C and 100 mm/s, respectively. The control accuracies of the experimental temperature and stretching rate are ±1 °C and 0.01 mm, respectively. All the parameters related to film biaxial processing, such as stretching speed, stretching ratio, and temperature, can be independently set. The device feasibility is demonstrated via a real-time experiment in a synchrotron radiation beamline. Wide-angle x-ray diffraction, small-angle x-ray scattering, and stress-strain data can be simultaneously obtained during various stretching modes. The proposed device fills the gap between the synchrotron radiation x-ray scattering technique and the biaxial stretching processing of polymer films. This device will play an important role in improving the understanding of the physics behind biaxial polymer processing.
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Affiliation(s)
- Jianhe Zhu
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Shenghui Liu
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Yimin Lu
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Hong Cheng
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Xueqing Han
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Liangbao Liu
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Lingpu Meng
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Wancheng Yu
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Kunpeng Cui
- Department of Polymer Science and Engineering, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
| | - Liangbin Li
- National Synchrotron Radiation Laboratory, Anhui Provincial Engineering Laboratory of Advanced Functional Polymer Film, CAS Key Laboratory of Soft Matter Chemistry, University of Science and Technology of China, Hefei 230026, China
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5
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Hagita K, Murashima T, Sakata N, Shimokawa K, Deguchi T, Uehara E, Fujiwara S. Molecular Dynamics of Topological Barriers on the Crystallization Behavior of Ring Polyethylene Melts with Trefoil Knots. Macromolecules 2022. [DOI: 10.1021/acs.macromol.2c01843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Katsumi Hagita
- Department of Applied Physics, National Defense Academy, 1-10-20, Hashirimizu, Yokosuka239-8686, Japan
| | - Takahiro Murashima
- Department of Physics, Tohoku University, 6-3, Aramaki-aza-Aoba, Aoba-ku, Sendai980-8578, Japan
| | - Naoki Sakata
- Department of Mathematics, Saitama University, 255, Shimo-Okubo, Sakura-ku, Saitama338-8570, Japan
- Department of Physics, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Koya Shimokawa
- Department of Mathematics, Saitama University, 255, Shimo-Okubo, Sakura-ku, Saitama338-8570, Japan
- Department of Mathematics, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Tetsuo Deguchi
- Department of Physics, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Erica Uehara
- Department of Physics, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Susumu Fujiwara
- Faculty of Materials Science and Engineering, Kyoto Institute of Technology, Matsugasaki,
Sakyo-ku, Kyoto606-8585, Japan
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6
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Murashima T, Hagita K, Kawakatsu T. Topological Transition in Multicyclic Chains with Structural Symmetry Inducing Stress-Overshoot Phenomena in Multicyclic/Linear Blends under Biaxial Elongational Flow. Macromolecules 2022. [DOI: 10.1021/acs.macromol.2c01579] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Takahiro Murashima
- Department of Physics, Tohoku University, 6-3 Aramaki-aza-Aoba, Aoba-ku, Sendai980-8578, Japan
| | - Katsumi Hagita
- Department of Applied Physics, National Defense Academy, 1-10-20 Hashirimizu, Yokosuka239-8686, Japan
| | - Toshihiro Kawakatsu
- Department of Physics, Tohoku University, 6-3 Aramaki-aza-Aoba, Aoba-ku, Sendai980-8578, Japan
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7
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Hagita K, Murashima T, Ohkuma T, Jinnai H. Ring-Filling Effect on Stress–Strain Curves of Randomly End-Linked Tetra-Arm Prepolymers. Macromolecules 2022. [DOI: 10.1021/acs.macromol.2c00451] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Katsumi Hagita
- Department of Applied Physics, National Defense Academy, 1-10-20, Hashirimizu, Yokosuka 239-8686, Japan
| | - Takahiro Murashima
- Department of Physics, Tohoku University, 6-3, Aramaki-aza-Aoba, Aoba-ku, Sendai 980-8578, Japan
| | - Takahiro Ohkuma
- Digital Engineering Division, Bridgestone Corporation, 3-1-1, Ogawahigashi, Kodaira, Tokyo 187-8531, Japan
| | - Hiroshi Jinnai
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1, Katahira, Aoba-ku, Sendai 980-8577, Japan
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8
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Maurya MK, Ruscher C, Mukherji D, Singh MK. Computational indentation in highly cross-linked polymer networks. Phys Rev E 2022; 106:014501. [PMID: 35974630 DOI: 10.1103/physreve.106.014501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Accepted: 05/27/2022] [Indexed: 06/15/2023]
Abstract
Indentation is a common experimental technique to study the mechanics of polymeric materials. The main advantage of using indentation is this provides a direct correlation between the microstructure and the small-scale mechanical response, which is otherwise difficult within the standard tensile testing. The majority of studies have investigated hydrogels, microgels, elastomers, and even soft biomaterials. However, a less investigated system is the indentation in highly cross-linked polymer (HCP) networks, where the complex network structure plays a key role in dictating their physical properties. In this work, we investigate the structure-property relationship in HCP networks using the computational indentation of a generic model. We establish a correlation between the local bond breaking, network rearrangement, and small-scale mechanics. The results are compared with the elastic-plastic deformation model. HCPs harden upon indentation.
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Affiliation(s)
- Manoj Kumar Maurya
- Department of Mechanical Engineering, Indian Institute of Technology Kanpur, Kanpur UP 208016, India
| | - Céline Ruscher
- Department of Mechanical Engineering, University of British Columbia, Vancouver, Canada BC V6T 1Z4
| | - Debashish Mukherji
- Quantum Matter Institute, University of British Columbia, Vancouver, Canada BC V6T 1Z4
| | - Manjesh Kumar Singh
- Department of Mechanical Engineering, Indian Institute of Technology Kanpur, Kanpur UP 208016, India
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9
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Hagita K, Murashima T, Ebe M, Isono T, Satoh T. Trapping probabilities of multiple rings in end-linked gels. POLYMER 2022. [DOI: 10.1016/j.polymer.2022.124683] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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10
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Hagita K, Murashima T, Ogino M, Omiya M, Ono K, Deguchi T, Jinnai H, Kawakatsu T. Efficient compressed database of equilibrated configurations of ring-linear polymer blends for MD simulations. Sci Data 2022; 9:40. [PMID: 35136085 PMCID: PMC8825841 DOI: 10.1038/s41597-022-01138-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Accepted: 12/21/2021] [Indexed: 11/18/2022] Open
Abstract
To effectively archive configuration data during molecular dynamics (MD) simulations of polymer systems, we present an efficient compression method with good numerical accuracy that preserves the topology of ring-linear polymer blends. To compress the fraction of floating-point data, we used the Jointed Hierarchical Precision Compression Number - Data Format (JHPCN-DF) method to apply zero padding for the tailing fraction bits, which did not affect the numerical accuracy, then compressed the data with Huffman coding. We also provided a dataset of well-equilibrated configurations of MD simulations for ring-linear polymer blends with various lengths of linear and ring polymers, including ring complexes composed of multiple rings such as polycatenane. We executed 109 MD steps to obtain 150 equilibrated configurations. The combination of JHPCN-DF and SZ compression achieved the best compression ratio for all cases. Therefore, the proposed method enables efficient archiving of MD trajectories. Moreover, the publicly available dataset of ring-linear polymer blends can be employed for studies of mathematical methods, including topology analysis and data compression, as well as MD simulations.
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Affiliation(s)
- Katsumi Hagita
- Department of Applied Physics, National Defense Academy, 1-10-20, Hashirimizu, Yokosuka, 239-8686, Japan.
| | - Takahiro Murashima
- Department of Physics, Tohoku University, 6-3, Aramaki-aza-Aoba, Aoba-ku, Sendai, 980-8578, Japan
| | - Masao Ogino
- Faculty of Informatics, Daido University, 10-3 Takiharu-cho, Minami-ku, Nagoya, 457-8530, Japan
| | - Manabu Omiya
- Information Initiative Center, Hokkaido University, Kita 11, Nishi 5, Kita-ku, Sapporo, 060-0811, Japan
| | - Kenji Ono
- Research Institute for Information Technology, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, 819-0395, Japan
| | - Tetsuo Deguchi
- Department of Physics, Ochanomizu University, 2-1-1 Ohtsuka, Bunkyo-ku, Tokyo, 112-8610, Japan
| | - Hiroshi Jinnai
- Institute of Multidisciplinary for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, 980-8577, Japan
| | - Toshihiro Kawakatsu
- Department of Physics, Tohoku University, 6-3, Aramaki-aza-Aoba, Aoba-ku, Sendai, 980-8578, Japan
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11
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Demonstration of reinforcement in polymer composite with rings penetrating the diamond-lattice network. POLYMER 2022. [DOI: 10.1016/j.polymer.2022.124637] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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12
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Jiang C, Zhang Y. Direct matching between the flow factor approach model and molecular dynamics simulation for nanochannel flows. Sci Rep 2022; 12:396. [PMID: 35013479 PMCID: PMC8748866 DOI: 10.1038/s41598-021-04391-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2021] [Accepted: 12/22/2021] [Indexed: 12/02/2022] Open
Abstract
Mathematically formulating nanochannel flows is challenging. Here, the values of the characteristic parameters were extracted from molecular dynamics simulation (MDS), and directly input to the closed-form explicit flow factor approach model (FFAM) for nanochannel flows. By this way, the physical nature of the simulated system in FFAM is the same with that in MDS. Two nano slit channel heights respectively with two different liquid-channel wall interactions were addressed. The flow velocity profiles across the channel height respectively calculated from MDS and FFAM were compared. By introducing the equivalent value \documentclass[12pt]{minimal}
\usepackage{amsmath}
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\setlength{\oddsidemargin}{-69pt}
\begin{document}$${{\Delta_{im} } \mathord{\left/ {\vphantom {{\Delta_{im} } D}} \right. \kern-\nulldelimiterspace} D}$$\end{document}Δim/D, FFAM fairly agrees with MDS for all the cases. The study values FFAM in simulating nanochannel flows.
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Affiliation(s)
- Chuntao Jiang
- School of Mathematics and Statistics, Xinyang Normal University, Xinyang, Henan, China
| | - Yongbin Zhang
- College of Mechanical Engineering, Changzhou University, Changzhou, Jiangsu, China.
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Hagita K, Murashima T, Sakata N. Mathematical Classification and Rheological Properties of Ring Catenane Structures. Macromolecules 2021. [DOI: 10.1021/acs.macromol.1c01705] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Katsumi Hagita
- Department of Applied Physics, National Defense Academy, 1-10-20 Hashirimizu, Yokosuka 239-8686, Japan
| | - Takahiro Murashima
- Department of Physics, Tohoku University, 6-3, Aramaki-aza-Aoba, Aoba-ku, Sendai 980-8578, Japan
| | - Naoki Sakata
- Department of Mathematics, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama 338-8570, Japan
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14
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Hagita K, Murashima T. Molecular Dynamics Simulations of Ring Shapes on a Ring Fraction in Ring–Linear Polymer Blends. Macromolecules 2021. [DOI: 10.1021/acs.macromol.1c00656] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Katsumi Hagita
- Department of Applied Physics, National Defense Academy, 1-10-20, Hashirimizu, Yokosuka 239-8686, Japan
| | - Takahiro Murashima
- Department of Physics, Tohoku University, 6-3, Aramaki-aza-Aoba, Aoba-ku, Sendai 980-8578, Japan
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