1
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Su C, Dallaston MA, Watson RD, Fahrenhorst-Jones T, Cameron JP, Pierens GK, Bernhardt PV, Savage GP, Williams CM. The (±)-5-Aza[1.0]triblattane Skeleton via Azetine Cycloaddition. Org Lett 2024; 26:2827-2831. [PMID: 38253345 DOI: 10.1021/acs.orglett.3c03655] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
Abstract
The first synthesis of the 5-aza[1.0]triblattane skeleton was achieved through a [4 + 2] cycloaddition approach using a suitably protected azetine and cyclopentadiene. A series of azetines were synthesized to explore both stability and suitable N-protection. The key step following cycloaddition utilized a noninitiated protonated aminyl radical cyclization to install the final 5-azatriblattane bond, but it was found to be considerably more unstable than the 6-aza isomer under acidic conditions.
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Affiliation(s)
- Chuyi Su
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072 Queensland Australia
| | - Madeleine A Dallaston
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072 Queensland Australia
| | - Renée D Watson
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072 Queensland Australia
| | - Tyler Fahrenhorst-Jones
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072 Queensland Australia
| | - Jacob P Cameron
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072 Queensland Australia
| | - Gregory K Pierens
- Centre for Advanced Imaging, University of Queensland, Brisbane, 4072 Queensland Australia
| | - Paul V Bernhardt
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072 Queensland Australia
| | - G Paul Savage
- CSIRO Manufacturing, Ian Wark Laboratory, Melbourne, 3168 Victoria, Australia
| | - Craig M Williams
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072 Queensland Australia
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2
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Fahrenhorst-Jones T, Marshall DL, Burns JM, Pierens GK, Van Meurs DP, Kong D, Bernhardt PV, Blanksby SJ, Savage GP, Eaton PE, Williams CM. 9-Azahomocubane. Chemistry 2024; 30:e202303133. [PMID: 37823679 DOI: 10.1002/chem.202303133] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 10/11/2023] [Accepted: 10/12/2023] [Indexed: 10/13/2023]
Abstract
Homocubane, a highly strained cage hydrocarbon, contains two very different positions for the introduction of a nitrogen atom into the skeleton, e. g., a position 1 exchange results in a tertiary amine whereas position 9 yields a secondary amine. Herein reported is the synthesis of 9-azahomocubane along with associated structural characterization, physical property analysis and chemical reactivity. Not only is 9-azahomocubane readily synthesized, and found to be stable as predicted, the basicity of the secondary amine was observed to be significantly lower than the structurally related azabicyclo[2.2.1]heptane, although similar to 1-azahomocubane.
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Affiliation(s)
- Tyler Fahrenhorst-Jones
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072, Queensland, Australia
| | - David L Marshall
- Central Analytical Research Facility and School of Chemistry and Physics, Queensland University of Technology, Brisbane, 4000, Queensland, Australia
| | - Jed M Burns
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072, Queensland, Australia
| | - Gregory K Pierens
- Centre for Advanced imaging, University of Queensland, Brisbane, 4072, Queensland, Australia
| | - Derek P Van Meurs
- Department of Chemistry, University of Chicago, Chicago, Illinois, 60637, USA
| | - Dehui Kong
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072, Queensland, Australia
| | - Paul V Bernhardt
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072, Queensland, Australia
| | - Stephen J Blanksby
- Central Analytical Research Facility and School of Chemistry and Physics, Queensland University of Technology, Brisbane, 4000, Queensland, Australia
| | - G Paul Savage
- CSIRO Manufacturing, Ian Wark Laboratory, Melbourne, 3168, Victoria, Australia
| | - Philip E Eaton
- Department of Chemistry, University of Chicago, Chicago, Illinois, 60637, USA
| | - Craig M Williams
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, 4072, Queensland, Australia
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3
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Fernández-Herrera MA, Barroso-Flores J, Merino G. Seeking the most stable isomer of azahomocubanes. RSC Adv 2023; 13:27672-27675. [PMID: 37727314 PMCID: PMC10506536 DOI: 10.1039/d3ra05117j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Accepted: 09/01/2023] [Indexed: 09/21/2023] Open
Abstract
This study examines the stability and protonation properties of four potential azahomocubanes. Through high-level ab initio computations, we find that 9-azahomocubane is the most stable isomer, closely followed by 5-azahomocubane, 1-azahomocubane, and 2-azahomocubane. However, understanding the stability of the systems with a nitrogen atom incorporated into a highly constrained polycyclic environment extends beyond mere bond angles or hybridization considerations. Strain energy analysis reveals that azahomocubanes experience less strain compared to their carbon congeners. An exploration of multiple solvents shows that their impact on relative energies and geometries is negligible. On the other hand, among the four isomers, 2-azahomocubane exhibits the highest tendency for protonation. Basicity, as assessed through the minimum electrostatic potential, correlates well with protonation affinities.
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Affiliation(s)
- María A Fernández-Herrera
- Departamento de Física Aplicada, Centro de Investigación y de Estudios Avanzados Unidad Mérida. Km 6 Antigua Carretera a Progreso. Apdo. Postal 73, Cordemex 97310 Mérida Yuc. Mexico
| | - Joaquín Barroso-Flores
- Instituto de Química, Universidad Nacional Autónoma de México Circuito Exterior SN, Ciudad Universitaria, Alcaldía Coyoacán CDMX 04510 Mexico
- Centro Conjunto de Investigación en Química Sustentable UAEM - UNAM Carr. Toluca-Atlacomulco km 14.5. Campus El Rosedal Toluca de Lerdo Estado de México 50200 Mexico
| | - Gabriel Merino
- Departamento de Física Aplicada, Centro de Investigación y de Estudios Avanzados Unidad Mérida. Km 6 Antigua Carretera a Progreso. Apdo. Postal 73, Cordemex 97310 Mérida Yuc. Mexico
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4
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Fahrenhorst-Jones T, Kong D, Burns JM, Pierens GK, Bernhardt PV, Savage GP, Williams CM. seco-1-Azacubane-2-carboxylic acid-Amide Bond Comparison to Proline. J Org Chem 2023; 88:12867-12871. [PMID: 37647582 DOI: 10.1021/acs.joc.3c01264] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
seco-1-Azacubane-2-carboxylic acid, an unusual and sterically constrained amino acid, was found to undergo amide bond formation at both the N- and C-termini using proline based bioactive molecule templates as a concept platform.
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Affiliation(s)
- Tyler Fahrenhorst-Jones
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, Queensland 4072, Australia
| | - Dehui Kong
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, Queensland 4072, Australia
| | - Jed M Burns
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, Queensland 4072, Australia
| | - Gregory K Pierens
- Centre for Advanced Imaging, University of Queensland, Brisbane, Queensland 4072, Australia
| | - Paul V Bernhardt
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, Queensland 4072, Australia
| | - G Paul Savage
- CSIRO Manufacturing, Ian Wark Laboratory, Melbourne, Victoria 3168, Australia
| | - Craig M Williams
- School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane, Queensland 4072, Australia
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5
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Fahrenhorst-Jones T, Marshall DL, Burns JM, Pierens GK, Hormann RE, Fisher AM, Bernhardt PV, Blanksby SJ, Savage GP, Eaton PE, Williams CM. 1-Azahomocubane. Chem Sci 2023; 14:2821-2825. [PMID: 36937576 PMCID: PMC10016339 DOI: 10.1039/d3sc00001j] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2023] [Accepted: 02/02/2023] [Indexed: 02/24/2023] Open
Abstract
Highly strained cage hydrocarbons have long stood as fundamental molecules to explore the limits of chemical stability and reactivity, probe physical properties, and more recently as bioactive molecules and in materials discovery. Interestingly, the nitrogenous congeners have attracted much less attention. Previously absent from the literature, azahomocubanes, offer an opportunity to investigate the effects of a nitrogen atom when incorporated into a highly constrained polycyclic environment. Herein disclosed is the synthesis of 1-azahomocubane, accompanied by comprehensive structural characterization, physical property analysis and chemical reactivity. These data support the conclusion that nitrogen is remarkably well tolerated in a highly strained environment.
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Affiliation(s)
- Tyler Fahrenhorst-Jones
- School of Chemistry and Molecular Biosciences, University of Queensland Brisbane 4072 Queensland Australia
| | - David L Marshall
- Central Analytical Research Facility and School of Chemistry and Physics, Queensland University of Technology Brisbane 4000 Queensland Australia
| | - Jed M Burns
- School of Chemistry and Molecular Biosciences, University of Queensland Brisbane 4072 Queensland Australia
| | - Gregory K Pierens
- Centre for Advanced Imaging, University of Queensland Brisbane 4072 Queensland Australia
| | - Robert E Hormann
- Department of Chemistry, University of Chicago Chicago Illinois 60637 USA
| | - Allison M Fisher
- Department of Chemistry, University of Chicago Chicago Illinois 60637 USA
| | - Paul V Bernhardt
- School of Chemistry and Molecular Biosciences, University of Queensland Brisbane 4072 Queensland Australia
| | - Stephen J Blanksby
- Central Analytical Research Facility and School of Chemistry and Physics, Queensland University of Technology Brisbane 4000 Queensland Australia
| | - G Paul Savage
- CSIRO Manufacturing, Ian Wark Laboratory Melbourne 3168 Victoria Australia
| | - Philip E Eaton
- Department of Chemistry, University of Chicago Chicago Illinois 60637 USA
| | - Craig M Williams
- School of Chemistry and Molecular Biosciences, University of Queensland Brisbane 4072 Queensland Australia
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