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Mankad Y, Thorat SS, Das P, Rama Krishna G, Kontham R, Reddy DS. Ready Access to Benzannulated [5,5]-Oxaspirolactones Using Au(III)-Catalyzed Cascade Cyclizations. J Org Chem 2022; 87:3025-3041. [PMID: 35188770 DOI: 10.1021/acs.joc.1c02843] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
This work showcases an unprecedented Au(III)-catalyzed cascade cyclization of 2-(4-hydroxyalkynyl)benzoates to access benzannulated [5,5]-oxaspirolactones related to biologically active natural products. This reaction proceeds through an initial 5-endo-dig mode of hydroalkoxylation of the alkynol segment to give the oxocarbenium species (via cyclic enol-ether) followed by the addition of carboxylate onto the oxocarbenium that delivers the oxaspirolactone scaffold. While testing this method's scope, we found that the steric and electronic environment of the hydroxyl group could alter the reaction pathway that delivers isochromenone through a competitive 6-endo-dig mode of attack of the carboxylate onto the tethered alkyne.
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Affiliation(s)
- Yash Mankad
- Natural Products and Medicinal Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu-180001, India.,Organic Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune-411008, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
| | - Sagar S Thorat
- Organic Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune-411008, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
| | - Pronay Das
- Organic Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune-411008, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
| | - Gamidi Rama Krishna
- Organic Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune-411008, India.,Center for Materials Characterization, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune-411008, India
| | - Ravindar Kontham
- Organic Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune-411008, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
| | - D Srinivasa Reddy
- Natural Products and Medicinal Chemistry Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu-180001, India.,Organic Chemistry Division, CSIR-National Chemical Laboratory, Dr. Homi Bhabha Road, Pune-411008, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
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2
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Biletskyi B, Colonna P, Masson K, Parrain JL, Commeiras L, Chouraqui G. Small rings in the bigger picture: ring expansion of three- and four-membered rings to access larger all-carbon cyclic systems. Chem Soc Rev 2021; 50:7513-7538. [PMID: 34002179 DOI: 10.1039/d0cs01396j] [Citation(s) in RCA: 54] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The release of the inherent ring strain of cyclobutane and cyclopropane derivatives allows a rapid build-up of molecular complexity. This review highlights the state-of-the-art of the ring expansions of three- and four-membered cycles and is organised by types of reactions with emphasis on the reaction mechanisms. Selected examples are discussed to illustrate the synthetic potential of this elegant synthetic tool.
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Affiliation(s)
- Bohdan Biletskyi
- Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, Marseille, France.
| | - Pierre Colonna
- Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, Marseille, France.
| | - Kévin Masson
- Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, Marseille, France.
| | - Jean-Luc Parrain
- Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, Marseille, France.
| | - Laurent Commeiras
- Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, Marseille, France.
| | - Gaëlle Chouraqui
- Aix Marseille Univ, CNRS, Centrale Marseille, iSm2, Marseille, France.
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3
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Mandal S, Thirupathi B. Strategies for the construction of γ-spirocyclic butenolides in natural product synthesis. Org Biomol Chem 2021; 18:5287-5314. [PMID: 32633316 DOI: 10.1039/d0ob00954g] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Over the last four decades, a number of γ-spirocyclic butenolide containing natural products, drugs, and medicinally useful synthetic compounds have been reported. In this review, we discuss diverse chemical approaches to synthesize γ-spiro butenolides and their application towards natural product synthesis. The collective perception of various methods may allow superior approaches capable of delivering efficient synthetic approaches to obtain γ-spiro butenolide comprising natural products and their hybrid analogues for further drug discovery and development.
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Affiliation(s)
- Sudip Mandal
- Department of Chemical Sciences, Indian Institute of Science Education and Research Berhampur, Transit Campus, Govt. ITI Building, NH 59, Engineering School Road, Ganjam-District, Berhampur 760 010, Odisha, India.
| | - Barla Thirupathi
- Department of Chemical Sciences, Indian Institute of Science Education and Research Berhampur, Transit Campus, Govt. ITI Building, NH 59, Engineering School Road, Ganjam-District, Berhampur 760 010, Odisha, India.
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4
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Thorat SS, Kontham R. Recent advances in the synthesis of oxaspirolactones and their application in the total synthesis of related natural products. Org Biomol Chem 2019; 17:7270-7292. [DOI: 10.1039/c9ob01212e] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Oxaspirolactones are ubiquitous structural motifs found in natural products and synthetic molecules with a diverse biochemical and physicochemical profile, and represent a valuable target in natural product chemistry and medicinal chemistry.
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Affiliation(s)
- Sagar S. Thorat
- Organic Chemistry Division
- CSIR-National Chemical Laboratory
- Pune-411008
- India
- Academy of Scientific and Innovative Research (AcSIR)
| | - Ravindar Kontham
- Organic Chemistry Division
- CSIR-National Chemical Laboratory
- Pune-411008
- India
- Academy of Scientific and Innovative Research (AcSIR)
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5
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Gillard RM, Brimble MA. Benzannulated spiroketal natural products: isolation, biological activity, biosynthesis, and total synthesis. Org Biomol Chem 2019; 17:8272-8307. [DOI: 10.1039/c9ob01598a] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
A review discussing the isolation, biological activity, biosynthesis, and total synthesis of naturally occurring benzannulated spiroketals.
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Affiliation(s)
- Rachel M. Gillard
- School of Chemical Sciences
- The University of Auckland
- Auckland
- New Zealand
| | - Margaret A. Brimble
- School of Chemical Sciences
- The University of Auckland
- Auckland
- New Zealand
- Maurice Wilkins Centre for Molecular Biodiscovery
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6
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Zhang XM, Tu YQ, Zhang FM, Chen ZH, Wang SH. Recent applications of the 1,2-carbon atom migration strategy in complex natural product total synthesis. Chem Soc Rev 2018; 46:2272-2305. [PMID: 28349159 DOI: 10.1039/c6cs00935b] [Citation(s) in RCA: 119] [Impact Index Per Article: 19.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
1,2-Carbon atom rearrangement has been broadly applied as a guiding strategy in complex molecule assembly. As it entails the carbon-carbon or carbon-heteroatom bond migration between two vicinal atoms, this type of reaction is capable of generating structural complexity through a molecular skeletal reorganization. This review will focus on recent employment of this strategy in the total synthesis of natural products, highlighting the exceptional utility of such synthetic methodologies in the construction of intricate carbocycles, heterocycles or structurally complex motifs from synthetically more accessible precursors.
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Affiliation(s)
- Xiao-Ming Zhang
- State Key Laboratory of Applied Organic Chemistry, Lanzhou University, Lanzhou 730000, P. R. China.
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7
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Abstract
Covering: 2016. Previous review: Nat. Prod. Rep., 2017, 34, 235-294This review covers the literature published in 2016 for marine natural products (MNPs), with 757 citations (643 for the period January to December 2016) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1277 in 432 papers for 2016), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that led to the revision of structures or stereochemistries, have been included.
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Affiliation(s)
- John W Blunt
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch, New Zealand
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8
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Yu Y, Zhang Y, Xiao LY, Peng QQ, Zhao YL. Thermally induced formal [4+2] cycloaddition of 3-aminocyclobutenones with electron-deficient alkynes: facile and efficient synthesis of 4-pyridones. Chem Commun (Camb) 2018; 54:8229-8232. [DOI: 10.1039/c8cc03974g] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
A thermally induced novel formal [4+2] cycloaddition of cyclobutenones with electron-deficient alkynes under metal-free conditions has been developed. The reaction provides a straightforward and efficient method for the synthesis of 4-pyridone derivatives in a single step.
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Affiliation(s)
- Yang Yu
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis
- Faculty of Chemistry
- Northeast Normal University
- Changchun 130024
- China
| | - Yan Zhang
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis
- Faculty of Chemistry
- Northeast Normal University
- Changchun 130024
- China
| | - Li-Yun Xiao
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis
- Faculty of Chemistry
- Northeast Normal University
- Changchun 130024
- China
| | - Qin-Qin Peng
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis
- Faculty of Chemistry
- Northeast Normal University
- Changchun 130024
- China
| | - Yu-Long Zhao
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis
- Faculty of Chemistry
- Northeast Normal University
- Changchun 130024
- China
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Zhang FM, Zhang SY, Tu YQ. Recent progress in the isolation, bioactivity, biosynthesis, and total synthesis of natural spiroketals. Nat Prod Rep 2018; 35:75-104. [DOI: 10.1039/c7np00043j] [Citation(s) in RCA: 57] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The isolation, bioactivity, biosynthesis, and total synthesis of natural spiroketals from 2011 to July 2017 have been summarized in this review.
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Affiliation(s)
- Fu-Min Zhang
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry and Chemical Engineering
- Lanzhou University
- Lanzhou 730000
- P. R. China
| | - Shu-Yu Zhang
- School of Chemistry and Chemical Engineering
- Shanghai Jiao Tong University
- Shanghai 200240
- P. R. China
| | - Yong-Qiang Tu
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry and Chemical Engineering
- Lanzhou University
- Lanzhou 730000
- P. R. China
- School of Chemistry and Chemical Engineering
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10
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Ivanov KL, Vatsouro IM, Bezzubov SI, Melnikov MY, Budynina EM. Domino construction of a bullataketal core via double bond cleavage in activated dihydrofurans. Org Chem Front 2018. [DOI: 10.1039/c8qo00132d] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
A new rapid approach to structurally challenging and biologically relevant methanobenzodioxepines was developed via a Brønsted acid-triggered domino transformation of 3-carbonyl-4,5-dihydrofurans, substituted with MOM-protected o-hydroxyaryls at the C4 atom.
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Affiliation(s)
| | - Ivan M. Vatsouro
- Department of Chemistry
- Lomonosov Moscow State University
- Moscow 119991
- Russia
| | - Stanislav I. Bezzubov
- Kurnakov Institute of General and Inorganic Chemistry
- Russian Academy of Sciences
- Moscow 119991
- Russia
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11
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Lorig-Roach N, Still PC, Coppage D, Compton JE, Crews MS, Navarro G, Tenney K, Crews P. Evaluating Nitrogen-Containing Biosynthetic Products Produced by Saltwater Culturing of Several California Littoral Zone Gram-Negative Bacteria. JOURNAL OF NATURAL PRODUCTS 2017; 80:2304-2310. [PMID: 28777571 PMCID: PMC5687060 DOI: 10.1021/acs.jnatprod.7b00302] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
The biosynthetic potential of marine-sediment-derived Gram-negative bacteria is poorly understood. Sampling of California near-shore marine environments afforded isolation of numerous Gram-negative bacteria in the Proteobacteria and Bacteriodetes phyla, which were grown in the laboratory to provide extracts whose metabolites were identified by comparative analyses of LC-mass spectrometry and MSn data. Overall, we developed an assemblage of seven bacterial strains grown in five different media types designed to coax out unique secondary metabolite production as a function of varying culture conditions. The changes in metabolite production patterns were tracked using the GNPS MS2 fragmentation pattern analysis tool. A variety of nitrogen-rich metabolites were visualized from the different strains grown in different media, and strikingly, all of the strains examined produced the same new, proton-atom-deficient compound, 1-methyl-4-methylthio-β-carboline (1), C13H12N2S. Scale-up liquid culture of Achromobacter spanius (order: Burkholderiales; class: Betaproteobacteria) provided material for the final structure elucidation. The methods successfully combined in this work should stimulate future studies of molecules from marine-derived Gram-negative bacteria.
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Affiliation(s)
- Nicholas Lorig-Roach
- Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States
| | - Patrick C. Still
- Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States
| | - David Coppage
- Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States
| | - Jennifer E. Compton
- Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States
| | - Mitchell S. Crews
- Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States
| | - Gabriel Navarro
- Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States
| | - Karen Tenney
- Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States
| | - Phillip Crews
- Corresponding Author Tel (P. Crews): (831) 459-2603. Fax: (831) 459-2935.
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12
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Saunders CM, Tantillo DJ. Application of Computational Chemical Shift Prediction Techniques to the Cereoanhydride Structure Problem-Carboxylate Complications. Mar Drugs 2017; 15:md15060171. [PMID: 28604638 PMCID: PMC5484121 DOI: 10.3390/md15060171] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2017] [Revised: 06/02/2017] [Accepted: 06/08/2017] [Indexed: 11/16/2022] Open
Abstract
Despite the vast array of techniques available to modern-day chemists, structural misassignments still occur. These misassignments are often only realized upon attempted synthesis, when the spectra of synthesized products do not match previously reported spectra. This was the case with marine natural product cereoanhydride. The originally proposed 7-membered ring anhydride (1) was shown to be incorrect, although a likely precursor to the correct structure (2) in both its laboratory synthesis and biosynthesis. Herein, in addition to showing how NMR computations could have been used to arrive at the correct structure, we show that the conversion of 1 to 2 is indeed energetically viable, and we highlight complications in predicting NMR chemical shifts for molecules with acidic protons.
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Affiliation(s)
- Carla M Saunders
- Department of Chemistry, University of California-Davis, 1 Shields Avenue, Davis, CA 95616, USA.
| | - Dean J Tantillo
- Department of Chemistry, University of California-Davis, 1 Shields Avenue, Davis, CA 95616, USA.
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14
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Feng J, Lei X, Guo Z, Tang Y. Total Synthesis of Homodimericin A. Angew Chem Int Ed Engl 2017; 56:7895-7899. [PMID: 28510326 DOI: 10.1002/anie.201702893] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2017] [Indexed: 01/19/2023]
Affiliation(s)
- Juan Feng
- School of Pharmaceutical Sciences; Tsinghua University; Beijing 100084 China
| | - Xiaoqiang Lei
- School of Pharmaceutical Sciences; Tsinghua University; Beijing 100084 China
| | - Zhen Guo
- School of Pharmaceutical Sciences; Tsinghua University; Beijing 100084 China
| | - Yefeng Tang
- School of Pharmaceutical Sciences; Tsinghua University; Beijing 100084 China
- Collaborative Innovation Center for Biotherapy; State Key Laboratory of Biotherapy and Cancer Center; West China Medical School; Sichuan University; Chengdu 610041 China
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15
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Gao S, Hu X. Nickel-catalyzed ring-opening of α-hydroxycyclobutenones with a remarkable ligand effect. Chem Commun (Camb) 2017; 53:10540-10543. [DOI: 10.1039/c7cc03340k] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
A Ni-catalyzed ring-opening of α-hydroxycyclobutenones is reported herein.
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Affiliation(s)
- Songsong Gao
- School of Chemistry & Material Science
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of Ministry of Education of China
- Northwest University
- Xi’an 710127
- China
| | - Xiangdong Hu
- School of Chemistry & Material Science
- Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of Ministry of Education of China
- Northwest University
- Xi’an 710127
- China
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Hill RA, Sutherland A. Hot off the press. Nat Prod Rep 2016; 33:1352-1356. [DOI: 10.1039/c6np90047j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A personal selection of 32 recent papers is presented covering various aspects of current developments in bioorganic chemistry and novel natural products such as kanamienamide from the marine cyanobacterium Moorea bouillonii.
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