1
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Yonge A, Gusmão GS, Fushimi R, Medford AJ. Model-Based Design of Experiments for Temporal Analysis of Products (TAP): A Simulated Case Study in Oxidative Propane Dehydrogenation. Ind Eng Chem Res 2024; 63:4756-4770. [PMID: 38525291 PMCID: PMC10958505 DOI: 10.1021/acs.iecr.3c03418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 02/15/2024] [Accepted: 02/18/2024] [Indexed: 03/26/2024]
Abstract
Temporal analysis of products (TAP) reactors enable experiments that probe numerous kinetic processes within a single set of experimental data through variations in pulse intensity, delay, or temperature. Selecting additional TAP experiments often involves an arbitrary selection of reaction conditions or the use of chemical intuition. To make experiment selection in TAP more robust, we explore the efficacy of model-based design of experiments (MBDoE) for precision in TAP reactor kinetic modeling. We successfully applied this approach to a case study of synthetic oxidative propane dehydrogenation (OPDH) that involves pulses of propane and oxygen. We found that experiments identified as optimal through the MBDoE for precision generally reduce parameter uncertainties to a higher degree than alternative experiments. The performance of MBDoE for model divergence was also explored for OPDH, with the relevant active sites (catalyst structure) being unknown. An experiment that maximized the divergence between the three proposed mechanisms was identified and provided evidence that improved the mechanism discrimination. However, reoptimization of kinetic parameters eliminated the ability to discriminate between models. The findings yield insight into the prospects and limitations of MBDoE for TAP and transient kinetic experiments.
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Affiliation(s)
- Adam Yonge
- School
of Chemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332, United States
| | - Gabriel S. Gusmão
- School
of Chemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332, United States
| | - Rebecca Fushimi
- Catalysis
and Transient Kinetics Group, Idaho National
Laboratory, Idaho
Falls, Idaho 83415, United States
| | - Andrew J. Medford
- School
of Chemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332, United States
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2
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Kreitz B, Lott P, Studt F, Medford AJ, Deutschmann O, Goldsmith CF. Automated Generation of Microkinetics for Heterogeneously Catalyzed Reactions Considering Correlated Uncertainties. Angew Chem Int Ed Engl 2023; 62:e202306514. [PMID: 37505449 DOI: 10.1002/anie.202306514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 07/06/2023] [Accepted: 07/26/2023] [Indexed: 07/29/2023]
Abstract
The study presents an ab-initio based framework for the automated construction of microkinetic mechanisms considering correlated uncertainties in all energetic parameters and estimation routines. 2000 unique microkinetic models were generated within the uncertainty space of the BEEF-vdW functional for the oxidation reactions of representative exhaust gas emissions from stoichiometric combustion engines over Pt(111) and compared to experiments through multiscale modeling. The ensemble of simulations stresses the importance of considering uncertainties. Within this set of first-principles-based models, it is possible to identify a microkinetic mechanism that agrees with experimental data. This mechanism can be traced back to a single exchange-correlation functional, and it suggests that Pt(111) could be the active site for the oxidation of light hydrocarbons. The study provides a universal framework for the automated construction of reaction mechanisms with correlated uncertainty quantification, enabling a DFT-constrained microkinetic model optimization for other heterogeneously catalyzed systems.
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Affiliation(s)
- Bjarne Kreitz
- School of Engineering, Brown University, 184 Hope Street, Providence, RI, 02912, USA
- Institute for Chemical Technology and Polymer Chemistry, Karlsruhe Institute of Technology, Engesserstr. 20, 76128, Karlsruhe, Germany
| | - Patrick Lott
- Institute for Chemical Technology and Polymer Chemistry, Karlsruhe Institute of Technology, Engesserstr. 20, 76128, Karlsruhe, Germany
| | - Felix Studt
- Institute for Chemical Technology and Polymer Chemistry, Karlsruhe Institute of Technology, Engesserstr. 20, 76128, Karlsruhe, Germany
- Institute of Catalysis Research and Technology, Karlsruhe Institute of Technology, 76344, Eggenstein-Leopoldshafen, Germany
| | - Andrew J Medford
- School of Chemical and Biomolecular Engineering, Atlanta, GA, 30318, USA
| | - Olaf Deutschmann
- Institute for Chemical Technology and Polymer Chemistry, Karlsruhe Institute of Technology, Engesserstr. 20, 76128, Karlsruhe, Germany
| | - C Franklin Goldsmith
- School of Engineering, Brown University, 184 Hope Street, Providence, RI, 02912, USA
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3
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Bridging the complexity gap in computational heterogeneous catalysis with machine learning. Nat Catal 2023. [DOI: 10.1038/s41929-023-00911-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/03/2023]
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4
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Garcia Carcamo RA, Zhang X, Estejab A, Zhou J, Hare BJ, Sievers C, Sarupria S, Getman RB. Differences in solvation thermodynamics of oxygenates at Pt/Al 2O 3 perimeter versus Pt(111) terrace sites. iScience 2023; 26:105980. [PMID: 36756373 PMCID: PMC9900392 DOI: 10.1016/j.isci.2023.105980] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2022] [Revised: 12/26/2022] [Accepted: 01/11/2023] [Indexed: 01/19/2023] Open
Abstract
A prominent role of water in aqueous-phase heterogeneous catalysis is to modify free energies; however, intuition about how is based largely on pure metal surfaces or even homogeneous solutions. Using multiscale modeling with explicit liquid water molecules, we show that the influence of water on the free energies of adsorbates at metal/support interfaces is different than that on pure metal surfaces. We specifically compute free energies of solvation for methanol and its constituents on a Pt/Al2O3 catalyst and compare the results to analogous values calculated on a pure Pt catalyst. We find that the more hydrophilic Pt/Al2O3 interface leads to smaller (more positive) free energies of solvation due to an increased entropy penalty resulting from the additional work necessary to disrupt the interfacial water structure and accommodate the interfacial species. The results will be of interest in other fields, including adsorption and proteins.
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Affiliation(s)
| | - Xiaohong Zhang
- Department of Chemical and Biomolecular Engineering, Clemson University, Clemson, SC 29634, USA
| | - Ali Estejab
- Department of Chemical and Biomolecular Engineering, Clemson University, Clemson, SC 29634, USA
| | - Jiarun Zhou
- Department of Chemical and Biomolecular Engineering, Clemson University, Clemson, SC 29634, USA
| | - Bryan J. Hare
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Carsten Sievers
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA
| | - Sapna Sarupria
- Department of Chemistry and Chemical Theory Center, University of Minnesota, Minneapolis, MN 55455, USA
| | - Rachel B. Getman
- Department of Chemical and Biomolecular Engineering, Clemson University, Clemson, SC 29634, USA,Corresponding author
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5
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Hussien AGS, Polychronopoulou K. A Review on the Different Aspects and Challenges of the Dry Reforming of Methane (DRM) Reaction. NANOMATERIALS (BASEL, SWITZERLAND) 2022; 12:3400. [PMID: 36234525 PMCID: PMC9565677 DOI: 10.3390/nano12193400] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/07/2022] [Revised: 04/24/2022] [Accepted: 07/14/2022] [Indexed: 06/16/2023]
Abstract
The dry reforming of methane (DRM) reaction is among the most popular catalytic reactions for the production of syngas (H2/CO) with a H2:CO ratio favorable for the Fischer-Tropsch reaction; this makes the DRM reaction important from an industrial perspective, as unlimited possibilities for production of valuable products are presented by the FT process. At the same time, simultaneously tackling two major contributors to the greenhouse effect (CH4 and CO2) is an additional contribution of the DRM reaction. The main players in the DRM arena-Ni-supported catalysts-suffer from both coking and sintering, while the activation of the two reactants (CO2 and CH4) through different approaches merits further exploration, opening new pathways for innovation. In this review, different families of materials are explored and discussed, ranging from metal-supported catalysts, to layered materials, to organic frameworks. DRM catalyst design criteria-such as support basicity and surface area, bimetallic active sites and promoters, and metal-support interaction-are all discussed. To evaluate the reactivity of the surface and understand the energetics of the process, density-functional theory calculations are used as a unique tool.
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Affiliation(s)
- Aseel G. S. Hussien
- Department of Mechanical Engineering, Khalifa University of Science and Technology, Main Campus, Abu Dhabi P.O. Box 127788, United Arab Emirates
- Center for Catalysis and Separations (CeCaS), Khalifa University of Science and Technology, Abu Dhabi P.O. Box 127788, United Arab Emirates
| | - Kyriaki Polychronopoulou
- Department of Mechanical Engineering, Khalifa University of Science and Technology, Main Campus, Abu Dhabi P.O. Box 127788, United Arab Emirates
- Center for Catalysis and Separations (CeCaS), Khalifa University of Science and Technology, Abu Dhabi P.O. Box 127788, United Arab Emirates
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6
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Sun R, Wang R, Liu X, Chen X, Che L, Fan H, Yang X, Guo Q. Hydrogen Production on Pt/TiO 2: Synergistic Catalysis between Pt Clusters and Interfacial Adsorbates. J Phys Chem Lett 2022; 13:3182-3187. [PMID: 35362985 DOI: 10.1021/acs.jpclett.2c00234] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Understanding the mechanism of hydrogen (H2) formation from the conversion of water (H2O) and renewables on TiO2 surfaces with cocatalysts via either photocatalysis or other catalytic processes is of significant importance to the successful design of efficient catalysts. Herein, we have investigated H2 production from H2O, CH3OH, and C2H5OH on a Pt cluster covered rutile (R)-TiO2(110) surface (Ptclut/R-TiO2(110)) to address the mechanism of H2 production. Experimental results demonstrate that surface adsorbates not only help H atom diffusion on Ptclut/R-TiO2(110) but also take part in H2 production directly. Further density functional theory (DFT) calculations suggest that H2 production on Ptclut/R-TiO2(110) occurs via a synergistic catalysis process between Pt clusters and interfacial adsorbates rather than a recombination reaction of H atoms on Pt clusters. This work provides new insight into H2 production from H2O and renewables with Pt/TiO2 catalysts, which may be applicable to H2 production on other Pt cluster deposited metal oxide catalysts.
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Affiliation(s)
- Rulin Sun
- College of Environmental Sciences and Engineering, Dalian Maritime University, Dalian, Liaoning 116026, P.R. China
| | - Ruimin Wang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, Liaoning 116023, P.R. China
| | - Xinlu Liu
- College of Environmental Sciences and Engineering, Dalian Maritime University, Dalian, Liaoning 116026, P.R. China
| | - Xiao Chen
- Shenzhen Key Laboratory of Energy Chemistry, Southern University of Science and Technology, Shenzhen 518055, P.R. China
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, Guangdong 518055, P.R. China
| | - Li Che
- College of Environmental Sciences and Engineering, Dalian Maritime University, Dalian, Liaoning 116026, P.R. China
| | - Hongjun Fan
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, Liaoning 116023, P.R. China
| | - Xueming Yang
- Shenzhen Key Laboratory of Energy Chemistry, Southern University of Science and Technology, Shenzhen 518055, P.R. China
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, Liaoning 116023, P.R. China
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, Guangdong 518055, P.R. China
| | - Qing Guo
- Shenzhen Key Laboratory of Energy Chemistry, Southern University of Science and Technology, Shenzhen 518055, P.R. China
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, Guangdong 518055, P.R. China
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7
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Fricke C, Rajbanshi B, Walker EA, Terejanu G, Heyden A. Propane Dehydrogenation on Platinum Catalysts: Identifying the Active Sites through Bayesian Analysis. ACS Catal 2022. [DOI: 10.1021/acscatal.1c04844] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Charles Fricke
- Department of Chemical Engineering, University of South Carolina, Columbia, South Carolina 29208, United States
| | - Biplab Rajbanshi
- Department of Chemistry, Visva-Bharati University, Santiniketan 731235, Birbhum, West Bengal, India
| | - Eric A. Walker
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Gabriel Terejanu
- Department of Computer Science, University of North Carolina at Charlotte, Charlotte, North Carolina, 28223, United States
| | - Andreas Heyden
- Department of Chemical Engineering, University of South Carolina, Columbia, South Carolina 29208, United States
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8
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Chen LS, Chen JJ, Ma TM, Li XN, He SG. CO self-promoted oxidation by gas-phase cluster anions IrVO4−. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2021.139276] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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9
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Baz A, Dix ST, Holewinski A, Linic S. Microkinetic modeling in electrocatalysis: Applications, limitations, and recommendations for reliable mechanistic insights. J Catal 2021. [DOI: 10.1016/j.jcat.2021.08.043] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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10
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Duan C, Chen S, Taylor MG, Liu F, Kulik HJ. Machine learning to tame divergent density functional approximations: a new path to consensus materials design principles. Chem Sci 2021; 12:13021-13036. [PMID: 34745533 PMCID: PMC8513898 DOI: 10.1039/d1sc03701c] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Accepted: 09/01/2021] [Indexed: 01/17/2023] Open
Abstract
Virtual high-throughput screening (VHTS) with density functional theory (DFT) and machine-learning (ML)-acceleration is essential in rapid materials discovery. By necessity, efficient DFT-based workflows are carried out with a single density functional approximation (DFA). Nevertheless, properties evaluated with different DFAs can be expected to disagree for cases with challenging electronic structure (e.g., open-shell transition-metal complexes, TMCs) for which rapid screening is most needed and accurate benchmarks are often unavailable. To quantify the effect of DFA bias, we introduce an approach to rapidly obtain property predictions from 23 representative DFAs spanning multiple families, “rungs” (e.g., semi-local to double hybrid) and basis sets on over 2000 TMCs. Although computed property values (e.g., spin state splitting and frontier orbital gap) differ by DFA, high linear correlations persist across all DFAs. We train independent ML models for each DFA and observe convergent trends in feature importance, providing DFA-invariant, universal design rules. We devise a strategy to train artificial neural network (ANN) models informed by all 23 DFAs and use them to predict properties (e.g., spin-splitting energy) of over 187k TMCs. By requiring consensus of the ANN-predicted DFA properties, we improve correspondence of computational lead compounds with literature-mined, experimental compounds over the typically employed single-DFA approach. Machine learning (ML)-based feature analysis reveals universal design rules regardless of density functional choices. Using the consensus among multiple functionals, we identify robust lead complexes in ML-accelerated chemical discovery.![]()
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Affiliation(s)
- Chenru Duan
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA +1-617-253-4584.,Department of Chemistry, Massachusetts Institute of Technology Cambridge MA 02139 USA
| | - Shuxin Chen
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA +1-617-253-4584.,Department of Chemistry, Massachusetts Institute of Technology Cambridge MA 02139 USA
| | - Michael G Taylor
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA +1-617-253-4584
| | - Fang Liu
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA +1-617-253-4584
| | - Heather J Kulik
- Department of Chemical Engineering, Massachusetts Institute of Technology Cambridge MA 02139 USA +1-617-253-4584
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11
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Becerra A, Prabhu A, Rongali MS, Velpur SCS, Debusschere B, Walker EA. How a Quantum Computer Could Quantify Uncertainty in Microkinetic Models. J Phys Chem Lett 2021; 12:6955-6960. [PMID: 34283593 DOI: 10.1021/acs.jpclett.1c01917] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
A method of uncertainty quantification on a quantum circuit using three samples for the Rh(111)-catalyzed CO oxidation reaction is demonstrated. Three parametrized samples of a reduced, linearized microkinetic model populate a single block diagonal matrix for a quantum circuit. This approach leverages the logarithmic scaling of the number of qubits with respect to matrix size. The Harrow, Hassidim, and Lloyd (HHL) algorithm for solving linear systems is employed, and the results are compared with the classical results. This application area of uncertainty quantification in chemical kinetics can experience a quantum advantage using the method reported here, although issues related to larger systems are discussed.
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Affiliation(s)
- Alejandro Becerra
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Anand Prabhu
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Mary Sharmila Rongali
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Sri Charan Simha Velpur
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Bert Debusschere
- Sandia National Laboratories, P.O. Box 969, MS 9051, Livermore, California 94551, United States
| | - Eric A Walker
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
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12
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Xu J, Cao XM, Hu P. Perspective on computational reaction prediction using machine learning methods in heterogeneous catalysis. Phys Chem Chem Phys 2021; 23:11155-11179. [PMID: 33972971 DOI: 10.1039/d1cp01349a] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Heterogeneous catalysis plays a significant role in the modern chemical industry. Towards the rational design of novel catalysts, understanding reactions over surfaces is the most essential aspect. Typical industrial catalytic processes such as syngas conversion and methane utilisation can generate a large reaction network comprising thousands of intermediates and reaction pairs. This complexity not only arises from the permutation of transformations between species but also from the extra reaction channels offered by distinct surface sites. Despite the success in investigating surface reactions at the atomic scale, the huge computational expense of ab initio methods hinders the exploration of such complicated reaction networks. With the proliferation of catalysis studies, machine learning as an emerging tool can take advantage of the accumulated reaction data to emulate the output of ab initio methods towards swift reaction prediction. Here, we briefly summarise the conventional workflow of reaction prediction, including reaction network generation, ab initio thermodynamics and microkinetic modelling. An overview of the frequently used regression models in machine learning is presented. As a promising alternative to full ab initio calculations, machine learning interatomic potentials are highlighted. Furthermore, we survey applications assisted by these methods for accelerating reaction prediction, exploring reaction networks, and computational catalyst design. Finally, we envisage future directions in computationally investigating reactions and implementing machine learning algorithms in heterogeneous catalysis.
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Affiliation(s)
- Jiayan Xu
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Centre for Computational Chemistry and Research Institute of Industrial Catalysis, School of Chemistry and Molecular Engineering, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, P. R. China. and School of Chemistry and Chemical Engineering, Queen's University Belfast, Belfast BT9 5AG, UK
| | - Xiao-Ming Cao
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Centre for Computational Chemistry and Research Institute of Industrial Catalysis, School of Chemistry and Molecular Engineering, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, P. R. China.
| | - P Hu
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Centre for Computational Chemistry and Research Institute of Industrial Catalysis, School of Chemistry and Molecular Engineering, East China University of Science and Technology, 130 Meilong Road, Shanghai, 200237, P. R. China. and School of Chemistry and Chemical Engineering, Queen's University Belfast, Belfast BT9 5AG, UK
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13
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Walker EA, Pallathadka SA. How a Quantum Computer Could Solve a Microkinetic Model. J Phys Chem Lett 2021; 12:592-597. [PMID: 33382628 DOI: 10.1021/acs.jpclett.0c03363] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
A CO oxidation microkinetic model is set up for a quantum circuit. The CO oxidation microkinetic model, and microkinetic models in general, exhibit an advantage of not requiring an encoding step because of being a subclass of systems of equations. The microkinetic model is cast as a nonlinear set of equations at first. Then, a linearizing approximation is made, and the resulting linear set of equations may be iterated to converge to the solution to the nonlinear set of equations. In this CO oxidation, the linearized set of equations is realized to chemical accuracy with one iteration. Current limitations in executing the quantum circuit to obtain the solution are discussed.
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Affiliation(s)
- Eric A Walker
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Shreyas Addamane Pallathadka
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
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14
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Bayesian learning of chemisorption for bridging the complexity of electronic descriptors. Nat Commun 2020; 11:6132. [PMID: 33257689 PMCID: PMC7705683 DOI: 10.1038/s41467-020-19524-z] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Accepted: 10/12/2020] [Indexed: 11/21/2022] Open
Abstract
Building upon the d-band reactivity theory in surface chemistry and catalysis, we develop a Bayesian learning approach to probing chemisorption processes at atomically tailored metal sites. With representative species, e.g., *O and *OH, Bayesian models trained with ab initio adsorption properties of transition metals predict site reactivity at a diverse range of intermetallics and near-surface alloys while naturally providing uncertainty quantification from posterior sampling. More importantly, this conceptual framework sheds light on the orbitalwise nature of chemical bonding at adsorption sites with d-states characteristics ranging from bulk-like semi-elliptic bands to free-atom-like discrete energy levels, bridging the complexity of electronic descriptors for the prediction of novel catalytic materials. Developing a generalizable model to describe adsorption processes at metal surfaces can be extremely challenging due to complex phenomena involved. Here the authors introduce a Bayesian learning approach based on ab initio data and the d-band model to capture the essential physics of adsorbate–substrate interactions.
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15
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Savara A, Walker EA. CheKiPEUQ Intro 1: Bayesian Parameter Estimation Considering Uncertainty or Error from both Experiments and Theory**. ChemCatChem 2020. [DOI: 10.1002/cctc.202000953] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Aditya Savara
- Surface Chemistry and Catalysis group Oak Ridge National Laboratory 1 Bethel Valley Road Oak Ridge TN 37830 USA
| | - Eric A. Walker
- Institute for Computational and Data Sciences Chemical and Biological Engineering University at Buffalo Buffalo NY 14260 USA
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16
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Walker EA, Ravisankar K, Savara A. CheKiPEUQ Intro 2: Harnessing Uncertainties from Data Sets, Bayesian Design of Experiments in Chemical Kinetics**. ChemCatChem 2020. [DOI: 10.1002/cctc.202000976] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Affiliation(s)
- Eric A. Walker
- Institute for Computational and Data Sciences Chemical and Biological Engineering University at Buffalo Buffalo NY-14260 USA
| | - Kishore Ravisankar
- Institute for Computational and Data Sciences Chemical and Biological Engineering University at Buffalo Buffalo NY-14260 USA
| | - Aditya Savara
- Surface Chemistry and Catalysis group Oak Ridge National Laboratory 1 Bethel Valley Road Oak Ridge TN-37830 USA
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17
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Zhao GC, Wang JS, Qiu YQ, Liu CG. Ensemble effect of heterogeneous Cu atoms promoting water-gas shift reaction. MOLECULAR CATALYSIS 2020. [DOI: 10.1016/j.mcat.2020.111046] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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18
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Gu GH, Choi C, Lee Y, Situmorang AB, Noh J, Kim YH, Jung Y. Progress in Computational and Machine-Learning Methods for Heterogeneous Small-Molecule Activation. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2020; 32:e1907865. [PMID: 32196135 DOI: 10.1002/adma.201907865] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2019] [Revised: 01/18/2020] [Indexed: 06/10/2023]
Abstract
The chemical conversion of small molecules such as H2 , H2 O, O2 , N2 , CO2 , and CH4 to energy and chemicals is critical for a sustainable energy future. However, the high chemical stability of these molecules poses grand challenges to the practical implementation of these processes. In this regard, computational approaches such as density functional theory, microkinetic modeling, data science, and machine learning have guided the rational design of catalysts by elucidating mechanistic insights, identifying active sites, and predicting catalytic activity. Here, the theory and methodologies for heterogeneous catalysis and their applications for small-molecule activation are reviewed. An overview of fundamental theory and key computational methods for designing catalysts, including the emerging data science techniques in particular, is given. Applications of these methods for finding efficient heterogeneous catalysts for the activation of the aforementioned small molecules are then surveyed. Finally, promising directions of the computational catalysis field for further outlooks are discussed, focusing on the challenges and opportunities for new methods.
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Affiliation(s)
- Geun Ho Gu
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Changhyeok Choi
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Yeunhee Lee
- Department of Physics and Graduate School of Nanoscience and Technology, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Andres B Situmorang
- Department of Physics and Graduate School of Nanoscience and Technology, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Juhwan Noh
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Yong-Hyun Kim
- Department of Physics and Graduate School of Nanoscience and Technology, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
| | - Yousung Jung
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141, Republic of Korea
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Abstract
The water gas shift (WGS) is an equilibrium exothermic reaction, whose corresponding industrial process is normally carried out in two adiabatic stages, to overcome the thermodynamic and kinetic limitations. The high temperature stage makes use of iron/chromium-based catalysts, while the low temperature stage employs copper/zinc-based catalysts. Nevertheless, both these systems have several problems, mainly dealing with safety issues and process efficiency. Accordingly, in the last decade abundant researches have been focused on the study of alternative catalytic systems. The best performances have been obtained with noble metal-based catalysts, among which, platinum-based formulations showed a good compromise between performance and ease of preparation. These catalytic systems are extremely attractive, as they have numerous advantages, including the feasibility of intermediate temperature (250–400 °C) applications, the absence of pyrophoricity, and the high activity even at low loadings. The particle size plays a crucial role in determining their catalytic activity, enhancing the performance of the nanometric catalytic systems: the best activity and stability was reported for particle sizes < 1.7 nm. Moreover the optimal Pt loading seems to be located near 1 wt%, as well as the optimal Pt coverage was identified in 0.25 ML. Kinetics and mechanisms studies highlighted the low energy activation of Pt/Mo2C-based catalytic systems (Ea of 38 kJ·mol−1), the associative mechanism is the most encountered on the investigated studies. This review focuses on a selection of recent published articles, related to the preparation and use of unstructured platinum-based catalysts in water gas shift reaction, and is organized in five main sections: comparative studies, kinetics, reaction mechanisms, sour WGS and electrochemical promotion. Each section is divided in paragraphs, at the end of the section a summary and a summary table are provided.
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20
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Walker EA, Mohammadi MM, Swihart MT. Graph Theory Model of Dry Reforming of Methane Using Rh(111). J Phys Chem Lett 2020; 11:4917-4922. [PMID: 32459487 DOI: 10.1021/acs.jpclett.0c01038] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The adsorption energies of intermediates of the dry reforming of methane reaction (DRM CH4 + CO2 ⇔ 2CO + 2H2) using Rh(111) are approximated. Graph theory creates descriptors of the intermediates. The information recorded in these descriptors includes the elemental identities of each atom, its neighbors, and its next-nearest neighbors. Graph theory is employed because it is a rapid approximation of more expensive density functional theory (DFT) calculations and because the descriptors created by graph theory are both human and machine interpretable. DRM contains a significant number of adsorbates, and side reactions, including reverse water-gas shift, may occur simultaneously. Therefore, DRM is well-poised for analysis by a graph theory model to predict large numbers of adsorption energies. A portion of adsorbates were calculated with DFT. Then, predictions were reported for the remaining adsorption energies not calculated with DFT.
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Affiliation(s)
- Eric A Walker
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
- Institute for Computational and Data Sciences, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Mohammad Moein Mohammadi
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Mark T Swihart
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
- RENEW Institute (Research and Education in eNergy, Environment and Water), University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
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21
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Dynamic vs static behaviour of a supported nanoparticle with reaction-induced catalytic sites in a lattice model. Sci Rep 2020; 10:2882. [PMID: 32076083 PMCID: PMC7031362 DOI: 10.1038/s41598-020-59739-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2019] [Accepted: 02/03/2020] [Indexed: 11/08/2022] Open
Abstract
Modern literature shows a rapidly growing interest to the supported nanocatalysts with dynamic behaviour under reaction conditions. This new frontier of heterogeneous catalysis is recognized as one of the most challenging and worthy of consideration from all possible angles. In this context, a previously suggested lattice model is used to get an insight, by means of kinetic Monte Carlo, into the influence of the mobility of reaction-induced catalytic sites of a two-dimensional supported nanoparticle on the system behaviour. The results speak in favour of feasibility of dynamic nanocatalysts with self-organized structures capable of robust functioning. This approach, from the macroscopic end, is believed to be a useful complement to ever developing experimental and first principle approaches.
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22
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Yang W, Solomon RV, Lu J, Mamun O, Bond JQ, Heyden A. Unraveling the mechanism of the hydrodeoxygenation of propionic acid over a Pt (1 1 1) surface in vapor and liquid phases. J Catal 2020. [DOI: 10.1016/j.jcat.2019.11.036] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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23
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Brandt AJ, Maddumapatabandi TD, Shakya DM, Xie K, Seuser GS, Farzandh S, Chen DA. Water-gas shift activity on Pt-Re surfaces and the role of the support. J Chem Phys 2019; 151:234714. [DOI: 10.1063/1.5128735] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Amy J. Brandt
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, USA
| | | | - Deependra M. Shakya
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, USA
| | - Kangmin Xie
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, USA
| | - Grant S. Seuser
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, USA
| | - Sharfa Farzandh
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, USA
| | - Donna A. Chen
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, USA
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Wang X, van Bokhoven JA, Palagin D. Atomically dispersed platinum on low index and stepped ceria surfaces: phase diagrams and stability analysis. Phys Chem Chem Phys 2019; 22:28-38. [PMID: 31602438 DOI: 10.1039/c9cp04973h] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Through the combination of density functional theory calculations and ab initio atomistic thermodynamics modeling, we demonstrate that atomically dispersed platinum species on ceria can adopt a range of local coordination configurations and oxidation states that depend on the surface structure and environmental conditions. Unsaturated oxygen atoms on ceria surfaces play the leading role in stabilization of PtOx species. Any mono-dispersed Pt0 species are thermodynamically unstable compared to bulk platinum, and oxidation of Pt0 to Pt2+ or Pt4+ is necessary to stabilize mono-dispersed platinum atoms. Reduction to Pt0 leads to sintering. Both Pt2+ and Pt4+ prefer to form the square-planar [PtO4] configuration. The two most stable Pt2+ species on the (223) and (112) surfaces are thermodynamically favorable between 300 and 1200 K. The most stable Pt4+ species on the (100) surface tends to desorb from the surface as gas phase above 950 K. The resulting phase diagrams of the atomically dispersed platinum in PtOx clusters on various ceria surfaces under a range of experimentally relevant conditions can be used to predict dynamic restructuring of atomically dispersed platinum catalysts and design new catalysts with engineered properties.
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Affiliation(s)
- Xing Wang
- Institute for Chemical and Bioengineering, ETH Zurich, Vladimir Prelog Weg 1, 8093 Zurich, Switzerland
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25
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Ellaby T, Briquet L, Sarwar M, Thompsett D, Skylaris CK. Modification of O and CO binding on Pt nanoparticles due to electronic and structural effects of titania supports. J Chem Phys 2019; 151:114702. [DOI: 10.1063/1.5120571] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Tom Ellaby
- Department of Chemistry, University of Southampton, Southampton, United Kingdom
| | - Ludovic Briquet
- Johnson Matthey Technology Centre,
Blounts Court, Sonning Common, Reading RG4 9NH, United Kingdom
| | - Misbah Sarwar
- Johnson Matthey Technology Centre,
Blounts Court, Sonning Common, Reading RG4 9NH, United Kingdom
| | - David Thompsett
- Johnson Matthey Technology Centre,
Blounts Court, Sonning Common, Reading RG4 9NH, United Kingdom
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Ammal SC, Heyden A. Understanding the Nature and Activity of Supported Platinum Catalysts for the Water–Gas Shift Reaction: From Metallic Nanoclusters to Alkali-Stabilized Single-Atom Cations. ACS Catal 2019. [DOI: 10.1021/acscatal.9b01560] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Salai Cheettu Ammal
- Department of Chemical Engineering, University of South Carolina, 301 South Main Street, Columbia, South Carolina 29208, United States
| | - Andreas Heyden
- Department of Chemical Engineering, University of South Carolina, 301 South Main Street, Columbia, South Carolina 29208, United States
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27
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Quaglio M, Bezzo F, Gavriilidis A, Cao E, Al‐Rifai N, Galvanin F. Identification of kinetic models of methanol oxidation on silver in the presence of uncertain catalyst behavior. AIChE J 2019. [DOI: 10.1002/aic.16707] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Marco Quaglio
- Department of Chemical EngineeringUniversity College London (UCL) London UK
| | - Fabrizio Bezzo
- CAPE‐Lab (Computer‐Aided Process Engineering Laboratory), Department of Industrial EngineeringUniversity of Padova (UNIPD) Padova Italy
| | | | - Enhong Cao
- Department of Chemical EngineeringUniversity College London (UCL) London UK
| | - Noor Al‐Rifai
- Department of Chemical EngineeringUniversity College London (UCL) London UK
| | - Federico Galvanin
- Department of Chemical EngineeringUniversity College London (UCL) London UK
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28
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Matera S, Schneider WF, Heyden A, Savara A. Progress in Accurate Chemical Kinetic Modeling, Simulations, and Parameter Estimation for Heterogeneous Catalysis. ACS Catal 2019. [DOI: 10.1021/acscatal.9b01234] [Citation(s) in RCA: 94] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Sebastian Matera
- Fachbereich Mathematik and Informatik, Freie Universität, 14195 Berlin, Germany
| | - William F. Schneider
- Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Andreas Heyden
- Department of Chemical Engineering, University of South Carolina, Columbia, South Carolina 29208, United States
| | - Aditya Savara
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
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29
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Wang LN, Li XN, He SG. Catalytic CO Oxidation by Noble-Metal-Free Ni 2VO 4,5- Clusters: A CO Self-Promoted Mechanism. J Phys Chem Lett 2019; 10:1133-1138. [PMID: 30802062 DOI: 10.1021/acs.jpclett.9b00047] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Catalytic CO oxidation is an important model reaction in gas-phase studies to provide a clear structure-reactivity understanding in related heterogeneous catalysis, whereas CO oxidation catalyzed by noble-metal (NM) free species has been scarcely reported, and the fundamental aspects are elusive. Herein a CO self-promoted mechanism of catalytic CO oxidation by O2 mediated with the Ni2VO4,5- clusters was experimentally identified and theoretically rationalized. The catalysis was characterized by mass spectrometry and quantum chemistry calculations. Ni2VO5- can oxidize CO to generate an oxygen-deficient product Ni2VO4-, which can only adsorb CO to give rise to Ni2VO4CO-, and the oxidative reactivity of Ni2VO4- can be boosted by the adsorbed CO. This finding reinforces the significance that the attached CO can modify the electronic structure of the Ni2 unit in Ni2VO4CO- and make the Ni2 unit behave like NM atoms to store the released electrons in an oxygen atom transfer process.
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Affiliation(s)
- Li-Na Wang
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species , Institute of Chemistry, Chinese Academy of Sciences , Beijing 100190 , P. R. China
- University of Chinese Academy of Sciences , Beijing 100049 , P. R. China
- Beijing National Laboratory for Molecular Sciences , CAS Research/Education Center for Excellence in Molecular Sciences , Beijing 100190 , P. R. China
| | - Xiao-Na Li
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species , Institute of Chemistry, Chinese Academy of Sciences , Beijing 100190 , P. R. China
- Beijing National Laboratory for Molecular Sciences , CAS Research/Education Center for Excellence in Molecular Sciences , Beijing 100190 , P. R. China
| | - Sheng-Gui He
- State Key Laboratory for Structural Chemistry of Unstable and Stable Species , Institute of Chemistry, Chinese Academy of Sciences , Beijing 100190 , P. R. China
- University of Chinese Academy of Sciences , Beijing 100049 , P. R. China
- Beijing National Laboratory for Molecular Sciences , CAS Research/Education Center for Excellence in Molecular Sciences , Beijing 100190 , P. R. China
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