Local conformational switching of supramolecular networks at the solid/liquid interface

Novel mixed self-assembled monolayers of L-cysteine and methanol on gold surfaces under ambient conditions

In this work, we carried out an experimental and theoretical study on the formation of self-assembled monolayers of L-cysteine molecules on gold surfaces in the presence of methanol as a solvent. We report for the first time L-cysteine and methanol ordered structures forming a mixed self-assembled mono-layer on Au(100) surfaces under ambient conditions. Finger-like ordered structures with a relative height of 0.10-0.20 nm, average width of 2.0 nm and variable lengths were observed using scanning tunneling microscopy under room temperature and ambient pressure conditions. Using X-ray photoemission spectroscopy, it was determined that L-cysteine molecules bind to the gold surface through the sulfur atom of their thiol group in two molecular configurations: neutral and zwitterionic. We found that the finger-like structures are the result of complex interactions of L-cysteine molecules with gold surfaces and L-cysteine molecules with methanol molecules and among all three components of the system (L-cysteine + methanol + gold surfaces). These interactions were detected through attenuated total reflectance-Fourier transform infrared spectroscopy. Furthermore, adsorbate/substrate interactions were studied by employing ab initio calculations using density functional theory, resulting in molecular arrangements formed by chains of L-cysteine pairs surrounded by physisorbed methanol molecules.

Deciphering the factors influencing electric field mediated polymerization and depolymerization at the solution-solid interface

Strong and oriented electric fields are known to influence structure as well as reactivity. The strong electric field (EF) between the tip of a scanning tunneling microscope (STM) and graphite has been used to modulate two-dimensional (2D) polymerization of aryl boronic acids where switching the polarity of the substrate bias enabled reversible transition between self-assembled molecular networks of monomers and crystalline 2D polymer (2DP) domains. Here, we untangle the different factors influencing the EF-mediated (de)polymerization of a boroxine-based 2DP on graphite. The influence of the solvent was systematically studied by varying the nature from polar protic to polar aprotic to non-polar. The effect of monomer concentration was also investigated in detail with a special focus on the time-dependence of the transition. Our experimental observations indicate that while the nucleation of 2DP domains is not initiated by the applied electric field, their depolymerization and subsequent desorption, are a consequence of the change in the polarity of the substrate bias within the area scanned by the STM tip. We conclude that the reversible transition is intimately linked to the bias-induced adsorption and desorption of the monomers, which, in turn, could drive changes in the local concentration of the monomers.

Rational Design of 2D Supramolecular Networks Switchable by External Electric Fields

The reversible formation of hydrogen bonds is a ubiquitous mechanism for controlling molecular assembly in biological systems. However, achieving predictable reversibility in artificial two-dimensional (2D) materials remains a significant challenge. Here, we use an external electric field (EEF) at the solid/liquid interface to trigger the switching of H-bond-linked 2D networks using a scanning tunneling microscope. Assisted by density functional theory and molecular dynamics simulations, we systematically vary the molecule-to-molecule interactions, i.e., the hydrogen-bonding strength, as well as the molecule-to-substrate interactions to analyze the EEF switching effect. By tuning the building block's hydrogen-bonding ability (carboxylic acids vs aldehydes) and substrate nature and charge (graphite, graphene/Cu, graphene/SiO2), we induce or freeze the switching properties and control the final polymorphic output in the 2D network. Our results indicate that the switching ability is not inherent to any particular building block but instead relies on a synergistic combination of the relative adsorbate/adsorbate and absorbate/substrate energetic contributions under surface polarization. Furthermore, we describe the dynamics of the switching mechanism based on the rotation of carboxylic groups and proton exchange, which generate the polarizable species that are influenced by the EEF. This work provides insights into the design and control of reversible molecular assembly in 2D materials, with potential applications in a wide range of fields, including sensors and electronics.

Influence of core size on self-assembled molecular networks composed of C3h-symmetric building blocks through hydrogen bonding interactions: structural features and chirality

The effect of the core size on the structure and chirality of self-assembled molecular networks was investigated using two aromatic carboxylic acid derivatives with frameworks displaying C3h symmetry, triphenylene derivative H3TTCA and dehydrobenzo[12]annulene (DBA) derivative DBACOOH, each having three carboxy groups per molecule. Scanning tunneling microscopy observations at the 1-heptanoic acid/graphite interface revealed H3TTCA exclusively forming a chiral honeycomb structure, and DBACOOH forming three structures (type I, II, and III structures) depending on its concentration and whether the system is subjected to annealing treatment. Hydrogen bonding interaction patterns and chirality were carefully analyzed based on a modeling study using molecular mechanics simulations. Moreover, DBACOOH forms chiral honeycomb structures through the co-adsorption of guest molecules. Structural diversity observed for DBACOOH is attributed to its relatively large core size, with this feature modulating the balance between molecule-molecule and molecule-substrate interactions.

Kinetic versus thermodynamic polymorph stabilization of a tri-carboxylic acid derivative at the solid-liquid interface

The carboxylic acid moiety gives rise to structural variability in surface-supported self-assembly due to the common expression of various H-bonding motifs. Self-assembly of 3-fold symmetric tricarboxylic acid derivatives on surfaces typically results in monolayer structures that feature the common 2-fold cyclic R22(8) H-bond motif for at least one of the carboxylic acid groups. Polymorphs that are exclusively based on 3-fold cyclic R33(12) H-bonds were predicted but remained elusive. Here, we show the emergence of such a superflower (SF) structure purely based on R33(12) H-bonds for L-benzene-1,3,5-tricarbonyl phenylalanine (L-BTA), a molecule derived from the well-studied trimesic acid (TMA). In contrast to TMA, L-BTA is not completely planar and is also equipped with additional functional groups for the formation of secondary intermolecular bonds. At the heptanoic acid-graphite interface we transiently observe a SF structure, which is dynamically converted into a chicken-wire structure that only exhibits R22(8) H-bonds. Interestingly, when using nonanoic acid as a solvent the initially formed SF structure remained stable. This unexpected behaviour is rationalized by accompanying force field simulations and experimental determination of solvent-dependent L-BTA solubility.

Adaptive 2D and Pseudo-2D Systems: Molecular, Polymeric, and Colloidal Building Blocks for Tailored Complexity

Two-dimensional and pseudo-2D systems come in various forms. Membranes separating protocells from the environment were necessary for life to occur. Later, compartmentalization allowed for the development of more complex cellular structures. Nowadays, 2D materials (e.g., graphene, molybdenum disulfide) are revolutionizing the smart materials industry. Surface engineering allows for novel functionalities, as only a limited number of bulk materials have the desired surface properties. This is realized via physical treatment (e.g., plasma treatment, rubbing), chemical modifications, thin film deposition (using both chemical and physical methods), doping and formulation of composites, or coating. However, artificial systems are usually static. Nature creates dynamic and responsive structures, which facilitates the formation of complex systems. The challenge of nanotechnology, physical chemistry, and materials science is to develop artificial adaptive systems. Dynamic 2D and pseudo-2D designs are needed for future developments of life-like materials and networked chemical systems in which the sequences of the stimuli would control the consecutive stages of the given process. This is crucial to achieving versatility, improved performance, energy efficiency, and sustainability. Here, we review the advancements in studies on adaptive, responsive, dynamic, and out-of-equilibrium 2D and pseudo-2D systems composed of molecules, polymers, and nano/microparticles.

Surface supramolecular assemblies tailored by chemical/physical and synergistic stimuli: a scanning tunneling microscopy study

Supramolecular self-assemblies formed by various non-covalent interactions can produce diverse functional networks on solid surfaces. These networks have recently attracted much interest from both fundamental and application points of view. Unlike covalent organic frameworks (COFs), the properties of the assemblies differ from each other depending on the constituent motifs. These various motifs may find diverse applications such as in crystal engineering, surface modification, and molecular electronics. Significantly, these interactions between/among the molecular tectonics are relatively weak and reversible, which makes them responsive to external stimuli. Moreover, for a liquid-solid-interface environment, the dynamic processes are amenable to in situ observation using scanning tunneling microscopy (STM). In the literature, most review articles focus on supramolecular self-assembly interactions. This review summarizes the recent literature in which stimulation sources, including chemical, physical, and their combined stimuli, cooperatively tailor supramolecular assemblies on surfaces. The appropriate design and synthesis of functional molecules that can be integrated on different surfaces permits the use of nanostructured materials and devices for bottom-up nanotechnology. Finally, we discuss synergic effect on materials science.

Resonant Electron Tunneling Induces Isomerization of π-Expanded Oligothiophene Macrocycles in a 2D Crystal

Macrocyclic oligothiophenes and their π-expanded derivatives constitute versatile building blocks for the design of (supra)molecularly engineered active interfaces, owing to their structural, chemical, and optoelectronic properties. Here, it is demonstrated how resonant tunneling effect induces single molecular isomerization in a 2D crystal, self-assembled at solid-liquid interfaces under ambient conditions. Monolayers of a series of four π-expanded oligothiophene macrocycles are investigated by means of scanning tunneling microscopy and scanning tunneling spectroscopy (STS) at the interface between their octanoic acid solutions and the basal plane of highly oriented pyrolytic graphite. Current-voltage characteristics confirm the donor-type character of the macrocycles, with the highest occupied molecular orbital and the lowest unoccupied molecular orbital (LUMO) positions consistent with time-dependent density functional theory calculations. Cyclic STS measurements show the redox isomerization from Z,Z-8T6A to its isomer E,E-8T6A occurring in the 2D crystal, due to the formation of a negatively charged species when the tunneling current is in resonance with the LUMO of the macrocycle.

Bidirectional Phase Transformation of Supramolecular Networks Using Two Molecular Signals

Reversible control of molecular self-assembly is omnipresent in adaptive biological systems, yet its realization in artificial systems remains a major challenge. Using scanning tunneling microscopy and density functional theory calculations, we show that a 2D supramolecular network formed by terthienobenzenetricarboxylic acid (TTBTA) can undergo a reversible structural transition between a porous and dense phase in response to different molecular signals (trimethyltripyrazolotriazine (TMTPT) and C₆₀). TMTPT molecules can induce a phase transition from the TTBTA honeycomb to the dense phase, whereas a reverse transition can be triggered by introducing C₆₀ molecules. This response stems from the selective association between signal molecules and TTBTA polymorphs. The successful realization of reversible molecular transformation represents important progress in controlling supramolecular surface nanostructures and could be potentially applicable in various areas of nanotechnology, including phase control, molecular sensing, and "smart" switchable surfaces.

"Concentration-in-Control" self-assembly concept at the liquid-solid interface challenged

Self-assembled molecular networks (SAMNs) on surfaces evoke a lot of interest, both from a fundamental as well as application point of view. When formed at the liquid–solid interface, precise control over different polymorphs can be achieved by simply adjusting the concentration of molecular building blocks in solution. Significant influence of solute concentration on self-assembly behavior has been observed, whether the self-assembly behavior is controlled by either van der Waals forces or hydrogen bonding interactions. In both cases, high- and low-density supramolecular networks have been observed at high and low solute concentrations, respectively. In contrast to this “concentration-in-control” self-assembly concept here we report an atypical concentration dependent self-assembly behavior at a solution–solid interface. At the interface between heptanoic acid (HA) and highly oriented pyrolytic graphite (HOPG), we show, using scanning tunneling microscopy (STM), the formation of a low-density porous network at high solute concentrations, and a high-density compact network at low solute concentrations. This intriguing inverse concentration dependent self-assembly behavior has been attributed to the preaggregation of solute molecules in the heptanoic acid solution as revealed by UV-vis spectroscopy. The observed results have been correlated to the molecular density of self-assembled monolayers attained at the HA/HOPG interface.

Surprise! against expectations, increasing (decreasing) the solute concentration leads to the formation of a low-density (high-density) self-assembled molecular network at the liquid–solid interface.

Hydrogen and Halogen Bonding in Homogeneous External Electric Fields: Modulating the Bond Strengths

Recent years have witnessed various fascinating phenomena arising from the interactions of noncovalent bonds with homogeneous external electric fields (EEFs). Here we performed a computational study to interpret the sensitivity of intrinsic bond strengths to EEFs in terms of steric effect and orbital interactions. The block-localized wavefunction (BLW) method, which combines the advantages of both ab initio valence bond (VB) theory and molecular orbital (MO) theory, and the subsequent energy decomposition (BLW-ED) approach were adopted. The sensitivity was monitored and analyzed using the induced energy term, which is the variation in each energy component along the EEF strength. Systems with single or multiple hydrogen (H) or halogen (X) bond(s) were also examined. It was found that the X-bond strength change to EEFs mainly stems from the covalency change, while generally the steric effect rules the response of H-bonds to EEFs. Furthermore, X-bonds are more sensitive to EEFs, with the key difference between H- and X-bonds lying in the charge transfer interaction. Since phenylboronic acid has been experimentally used as a smart linker in EEFs, switchable sensitivity was scrutinized with the example of the phenylboronic acid dimer, which exhibits two conformations with either antiparallel or parallel H-bonds, thereby, opposite or consistent responses to EEFs. Among the studied systems, the quadruple X-bonds in molecular capsules exhibit remarkable sensitivity, with its interaction energy increased by -95.2 kJ mol^-1 at the EEF strength 0.005 a.u.

Detection and Stabilization of a Previously Unknown Two-Dimensional (Pseudo)polymorph using Lateral Nanoconfinement

We report on the detection and stabilization of a previously unknown two-dimensional (2D) pseudopolymorph of an alkoxy isophthalic acid using lateral nanoconfinement. The self-assembled molecular networks formed by the isophthalic acid derivative were studied at the interface between covalently modified graphite and an organic solvent. When self-assembled on graphite with moderate surface coverage of covalently bound aryl groups, a previously unknown metastable pseudopolymorph was detected. This pseudopolymorph, which was presumably "trapped" in between the surface bound aryl groups, underwent a time-dependent phase transition to the stable polymorph typically observed on pristine graphite. The stabilization of the pseudopolymorph was then achieved by using an alternative nanoconfinement strategy, where the domains of the pseudopolymorph could be formed and stabilized by restricting the self-assembly in nanometer-sized shallow compartments produced by STM-based nanolithography carried out on a graphite surface with a high density of covalently bound aryl groups. These experimental results are supported by molecular mechanics and molecular dynamics simulations, which not only provide important insight into the relative stabilities of the different structures, but also shed light onto the mechanism of the formation and stabilization of the pseudopolymorph under nanoscopic lateral confinement.

Supramolecular Chemistry: Host-Guest Molecular Complexes

In recent times, researchers have emphasized practical approaches for capturing coordinated and selective guest entrap. The physisorbed nanoporous supramolecular complexes have been widely used to restrain various guest species on compact supporting surfaces. The host-guest (HG) interactions in two-dimensional (2D) permeable porous linkages are growing expeditiously due to their future applications in biocatalysis, separation technology, or nanoscale patterning. The different crystal-like nanoporous network has been acquired to enclose and trap guest molecules of various dimensions and contours. The host centers have been lumped together via noncovalent interactions (such as hydrogen bonds, van der Waals (vdW) interactions, or coordinate bonds). In this review article, we enlighten and elucidate recent progress in HG chemistry, explored via scanning tunneling microscopy (STM). We summarize the synthesis, design, and characterization of typical HG structural design examined on various substrates, under ambient surroundings at the liquid-solid (LS) interface, or during ultrahigh vacuum (UHV). We emphasize isoreticular complexes, vibrant HG coordination, or hosts functional cavities responsive to the applied stimulus. Finally, we critically discuss the significant challenges in advancing this developing electrochemical field.

2D cocrystal engineering: switching the robust carboxylic acid–pyridine supramolecular heterosynthon via an oriented external electric field

The response of 2D cocrystals with the carboxylic acid–pyridine supramolecular heterosynthon to the oriented external electric field is identified on solid surfaces.

Two-dimensional co-crystallization of two carboxylic acid derivatives having dissimilar symmetries at the liquid/solid interface

By the co-assembly of two carboxylic acids with distinct symmetries and different numbers of carboxyl groups, we obtained two novel cocrystal structures at the n-octanoic acid/HOPG interface, one of which was sustained by unoptimized R22(8) hydrogen bonding. Benefiting from the bias-sensitivity of the BTB (1,3,5-tris(4-carboxyphenyl)benzene) molecule, a structure transition between the cocrystal network and a denser BTB lamella is achieved.

Growth of a self-assembled monolayer decoupled from the substrate: nucleation on-command using buffer layers

Structural polymorphism is ubiquitous in physisorbed self-assembled monolayers formed at the solution-solid interface. One of the ways to influence network formation at this interface is to physically decouple the self-assembled monolayer from the underlying substrate thereby removing the influence of the substrate lattice, if any. Here we show a systematic exploration of self-assembly of a typical building block, namely 4-tetradecyloxybenzoic acid at the 1-phenyloctane-graphite interface in the presence and in the absence of a buffer layer formed by a long chain alkane, namely n-pentacontane. Using scanning tunneling microscopy (STM), three different structural polymorphs were identified for 4-tetradecyloxybenzoic acid at the 1-phenyloctane-graphite interface. Surprisingly, the same three structures were formed on top of the buffer layer, albeit at different concentrations. Systematic variation of experimental parameters did not lead to any new network in the presence of the buffer layer. We discovered that the self-assembly on top of the buffer layer allows better control over the nanoscale manipulation of the self-assembled networks. Using the influence of the STM tip, we could initiate the nucleation of small isolated domains of the benzoic acid on-command in a reproducible fashion. Such controlled nucleation experiments hold promise for studying fundamental processes inherent to the assembly process on surfaces.

Nanoscale tailoring of supramolecular crystals via an oriented external electric field

The oriented external electric field of a scanning tunneling microscope (STM) has recently been adapted for controlling the chemical reaction and supramolecular phase transition at surfaces with molecular precision. However, to date, advance controls using such electric-fields for crystal engineering have not been achieved yet. Here, we present how the directional electric-field of an STM can be utilized to harness supramolecular crystallization on a solid surface. We show that a glass-like random-tiling assembly composed of p-terphenyl-3,5,3',5'-tetracarboxylic acid can transform into close-packed periodic assemblies under positive substrate bias conditions at the liquid/solid interface. Importantly, the nucleation and subsequent crystal growth for such field-induced products can be artificially tailored at the early stage in a real-time fashion. Through this method, we were able to produce a two-dimensional supramolecular single crystal. The as-prepared crystals with apparent brightness are ascribed to a spectroscopic feature linked to the electron density of states, which is thus strongly STM bias dependent.

Dynamic Supramolecular Template: Multiple Stimuli-Controlled Size Adjustment of Porous Networks

Dynamically switchable porous networks offer exciting potential in functionalizing surfaces. The structure and morphology of the networks can be controlled by applying external stimuli. Here, a dynamic supramolecular template assembled by 1,3,5-tris(4-carboxyphenyl)benzene (BTB) is successfully achieved at the liquid-solid interface by applying two external stimuli simultaneously. Upon varying the concentration of BTB solution together with switching the polarity of the sample bias, self-assembled monolayers (SAMs) undergo phase transitions twice: an immediate transition from a compact structure to a macroporous (honeycomb) structure as a response to the change in the electric field and a fast-changing transition from the macroporous to a microporous (oblique) structure. With saturated BTB solution, however, the initial compact structure can only transform into the oblique structure after switching the polarity of the sample bias without the appearance of a honeycomb structure. The different phase transitions suggest that the dynamic supramolecular template can only survive at a specific concentration range and is obtainable by performing multiple stimuli simultaneously. Interestingly, introducing a guest molecule to the system can adjust the phase transition process and effectively stabilize the honeycomb structure of BTB. The flexibility associated with the porous networks renders it a dynamic supramolecular template for guest binding.

Dynamic surface-assisted assembly behaviours mediated by external stimuli

Supramolecular self-assembly behaviors on solid substrates have been widely investigated in the last few decades. Owing to the complexity of interfacial assembly systems, the precise regulation of supramolecular nanostructures is still challenging and waits to be solved. The supramolecular nanostructures are governed by non-covalent bonds, so they can be disrupted and influenced by an external environment. In this review, the dynamic supramolecular nanostructures that are mediated by external stimuli containing guest species, light irradiation, temperature and electric field are discussed in detail. The research studies mentioned in this article are all accomplished by STM, and the effects of these external stimuli on the assembled nanostructures have been elucidated exhaustively here.

Electric-field-induced supramolecular phase transitions at the liquid/solid interface: cat-assembly from solvent additives

The electrically triggered phase transformations of trimesic acid can be efficiently promoted to occur in an environment where trace levels of a highly polar solvent additive are present at the liquid/solid interface, as revealed by STM and DFT simulations.

Tri-Stable Structural Switching in 2D Molecular Assembly at the Liquid/Solid Interface Triggered by External Electric Field

A tri-stable structural switching between different polymorphisms is presented in the 2D molecular assembly of a 5-(benzyloxy)isophthalic acid derivative (BIC-C12) at the liquid/solid interface. The assembled structure of BIC-C12 is sensitive to the applied voltage between the STM tip and the sample surface. A compact lamellar structure is exclusively observed at positive sample bias, while a porous honeycomb structure or a quadrangular structure is preferred at negative sample bias. Selective switching between the lamellar structure and the honeycomb structure or the quadrangular structure is realized by controlling the polarity and magnitude of the sample bias. The transition between the honeycomb structure and the quadrangular structure is, however, absent in the assembly. This tri-stable structural switching is closely related to the molecular concentration in the liquid phase. This result provides insights into the effect of external electric field on molecular assembly and benefits the design and construction of switchable molecular architectures on surfaces.

Chlorine-assisted fabrication of hybrid supramolecular structures via electrostatic interactions

Supramolecular self-assembly is a spontaneous process relying on non-covalent intermolecular interactions. Among them, electrostatic interactions generated by organic molecules interacting with alkali metals and/or halogens play an important role in structural formation. Herein, we choose cytosine and NaCl as a model system and, from the interplay of STM imaging and DFT calculations, a hybrid network composed of both metal-organic and pure organic motifs interlinked by Cl ions via electrostatic interactions is observed on the Au(111) surface. Moreover, the occasionally missing Cl ions in connections are accompanied by the absence of adjacent organic motifs resulting in defects of the network. This study successfully demonstrates the generality of salt providing both cations and anions simultaneously in the modulation of the structure and provides fundamental knowledge on the formation of hybrid structures as well as the function of halogens in affecting the self-assembly process.

Supramolecular Assemblies on Surfaces: Nanopatterning, Functionality, and Reactivity

Understanding how molecules interact to form large-scale hierarchical structures on surfaces holds promise for building designer nanoscale constructs with defined chemical and physical properties. Here, we describe early advances in this field and highlight upcoming opportunities and challenges. Both direct intermolecular interactions and those that are mediated by coordinated metal centers or substrates are discussed. These interactions can be additive, but they can also interfere with each other, leading to new assemblies in which electrical potentials vary at distances much larger than those of typical chemical interactions. Earlier spectroscopic and surface measurements have provided partial information on such interfacial effects. In the interim, scanning probe microscopies have assumed defining roles in the field of molecular organization on surfaces, delivering deeper understanding of interactions, structures, and local potentials. Self-assembly is a key strategy to form extended structures on surfaces, advancing nanolithography into the chemical dimension and providing simultaneous control at multiple scales. In parallel, the emergence of graphene and the resulting impetus to explore 2D materials have broadened the field, as surface-confined reactions of molecular building blocks provide access to such materials as 2D polymers and graphene nanoribbons. In this Review, we describe recent advances and point out promising directions that will lead to even greater and more robust capabilities to exploit designer surfaces.

Two-dimensional self-assembled nanostructures of nucleobases and their related derivatives on Au(111)

The construction of two-dimensional (2D) self-assembled nanostructures has been one of the considerably interesting areas of on-surface chemistry in the past few decades, and has benefited from the rapid development and improvement of scanning probe microscopy techniques. In this research field, many attempts have been made in the controllable fabrication of well-ordered and multifunctional surface nanostructures, which attracted interest because of the prospect for artificial design of functional molecular nanodevices. DNA and RNA are considered to be programmable self-assembly systems and it is possible to use their base sequences to encode instructions for assembly in a predetermined fashion at the nanometer scale. As important constituents of nucleic acids, nucleobases, with intrinsic functional groups for hydrogen bonding, coordination bonding, and electrostatic interactions, can be employed as a potential system for the versatile construction of various biomolecular nanostructures, which may be used to structure the self-assembly of DNA-based artificial molecular constructions and play an important role in novel biosensors based on surface functionalization. In this article, we will review the recent progress of on-surface self-assembly of nucleobases and their derivatives together with different reactants (e.g., metals, halogens, salts and water), and as a result, various 2D surface nanostructures are summarized.

Bias-induced conformational switching of supramolecular networks of trimesic acid at the solid-liquid interface

Using the tip of a scanning tunneling microscope, an electric field-induced reversible phase transition between two planar porous structures ("chickenwire" and "flower") of trimesic acid was accomplished at the nonanoic acid/highly oriented pyrolytic graphite interface. The chickenwire structure was exclusively observed for negative sample bias, while for positive sample bias only the more densely packed flower structure was found. We suggest that the slightly negatively charged carboxyl groups of the trimesic acid molecule are the determining factor for this observation: their adsorption behavior varies with the sample bias and is thus responsible for the switching behavior.

Surface Separation and in Situ Structural Regulation of Photosensitive Oligomer in a Flexible Template

Surface-selective adsorption and separation are very important for the application of surface functional materials. In this study, a photosensitive diazo-macrocycle has been synthesized by the solvent method with a very low yield, which can adsorb onto the substrate surface modified with a template molecule. By using this flexible template on the graphite surface, a simple separation strategy for the macrocyclic molecule with specific shape and size from reaction mixtures was developed. Additionally, one of the two azo units in this trapped photosensitive macrocycle could convert from trans to cis conformation under UV irradiation due to the steric effect. Our results provide a new way to construct functional nanodevices using a surface flexible template as the separation and regulation medium.

Chirality switching of the self-assembled CuPc domains induced by electric field

Chiral switching of the self-assembled domains of CuPc molecules on the Cd(0001) surface has been investigated by means of a low temperature scanning tunneling microscopy (STM). With the coverage increasing, the CuPc molecules show the structural evolutions from an initial gas-like state to a network phase, a square phase, and finally to a compact phase at full monolayer. In the network and square phases, the achiral CuPc molecules reveal both the point chirality and chiral domains. In particular, the chirality of network domain can be switched from one enantiomer to another driven by the electric filed from a STM tip, which can also lead to the lattice rotation of network phase. These results demonstrate that (i) there is strong interaction between the CuPc molecules and STM tip; (ii) the adsorbed CuPc molecules carry considerable net charge or polarizability due to the charge transfer; (iii) the network phase has a low barrier for the interconversion between right- and left-handed domains. Our findings are significant for the understanding and control of the domain's chirality in the self-assembled structures.

Host-guest chemistry in two-dimensional supramolecular networks

Nanoporous supramolecular networks physisorbed on solid surfaces have been extensively used to immobilize a variety of guest molecules. Host-guest chemistry in such two-dimensional (2D) porous networks is a rapidly expanding field due to potential applications in separation technology, catalysis and nanoscale patterning. Diverse structural topologies with high crystallinity have been obtained to capture molecular guests of different sizes and shapes. A range of non-covalent forces such as hydrogen bonds, van der Waals interactions, coordinate bonds have been employed to assemble the host networks. Recent years have witnessed a surge in the activity in this field with the implementation of rational design strategies for realizing controlled and selective guest capture. In this feature article, we review the development in the field of surface-supported host-guest chemistry as studied by scanning tunneling microscopy (STM). Typical host-guest architectures studied on solid surfaces, both under ambient conditions at the solution-solid interface as well as those formed at the ultrahigh vacuum (UHV)-solid interface, are described. We focus on isoreticular host networks, hosts functionalized pores and dynamic host-guest systems that respond to external stimuli.

Phase separation and selective guest–host binding in multi-component supramolecular self-assembly on Au(111)

We find a phase separation and selective guest–host inclusion in the self-assembly of trimesic acid, benzenetribenzoic acid and coronene on Au(111).

Nanoscale Control over the Mixing Behavior of Surface-Confined Bicomponent Supramolecular Networks Using an Oriented External Electric Field

Strong electric fields are known to influence the properties of molecules as well as materials. Here we show that by changing the orientation of an externally applied electric field, one can locally control the mixing behavior of two molecules physisorbed on a solid surface. Whether the starting two-component network evolves into an ordered two-dimensional (2D) cocrystal, yields an amorphous network where the two components phase separate, or shows preferential adsorption of only one component depends on the solution stoichiometry. The experiments are carried out by changing the orientation of the strong electric field that exists between the tip of a scanning tunneling microscope and a solid substrate. The structure of the two-component network typically changes from open porous at negative substrate bias to relatively compact when the polarity of the applied bias is reversed. The electric-field-induced mixing behavior is reversible, and the supramolecular system exhibits excellent stability and good response efficiency. When molecular guests are adsorbed in the porous networks, the field-induced switching behavior was found to be completely different. Plausible reasons behind the field-induced mixing behavior are discussed.

Electric-field-controlled phase transition in a 2D molecular layer

Self-assembly of organic molecules is a mechanism crucial for design of molecular nanodevices. We demonstrate unprecedented control over the self-assembly, which could allow switching and patterning at scales accessible by lithography techniques. We use the scanning tunneling microscope (STM) to induce a reversible 2D-gas-solid phase transition of copper phthalocyanine molecules on technologically important silicon surface functionalized by a metal monolayer. By means of ab-initio calculations we show that the charge transfer in the system results in a dipole moment carried by the molecules. The dipole moment interacts with a non-uniform electric field of the STM tip and the interaction changes the local density of molecules. To model the transition, we perform kinetic Monte Carlo simulations which reveal that the ordered molecular structures can form even without any attractive intermolecular interaction.

Host-Guest Chemistry in Integrated Porous Space Formed by Molecular Self-Assembly at Liquid-Solid Interfaces

Host-guest chemistry in two-dimensional (2D) space, that is, physisorbed monolayers of a single atom or a single molecular thickness on surfaces, has become a subject of intense current interest because of perspectives for various applications in molecular-scale electronics, selective sensors, and tailored catalysis. Scanning tunneling microscopy has been used as a powerful tool for the visualization of molecules in real space on a conducting substrate surface. For more than a decade, we have been investigating the self-assembly of a series of triangle-shaped phenylene-ethynylene macrocycles called dehydrobenzo[12]annulenes (DBAs). These molecules are substituted with six alkyl chains and are capable of forming hexagonal porous 2D molecular networks via van der Waals interactions between interdigitated alkyl chains at the interface of organic solvents and graphite. The dimension of the nanoporous space or nanowell formed by the self-assembly of DBAs can be controlled from 1.6 to 4.7 nm by simply changing the alkyl chain length from C₆ to C₂₀. Single molecules as well as homoclusters and heteroclusters are capable of coadsorbing within the host matrix using shape- and size-complementarity principles. Moreover, on the basis of the versatility of the DBA molecules that allows chemical modification of the alkyl chain terminals, we were able to decorate the interior space of the nanoporous networks with functional groups such as azobenzenedicarboxylic acid for photoresponsive guest adsorption/desorption or fluoroalkanes and tetraethylene glycol groups for selective guest binding by electrostatic interactions and zinc-porphyrin units for complexation with a guest by charge-transfer interactions. In this Feature Article, we describe the general aspects of molecular self-assembly at liquid/solid interfaces, followed by the formation of programmed porous molecular networks using rationally designed molecular building blocks. We focus on our own work involving host-guest chemistry in integrated nanoporous space that is modified for specific purposes.

Frontiers of supramolecular chemistry at solid surfaces

Supramolecular chemistry on solid surfaces represents an exciting field of research that continues to develop in new and unexpected directions.

Synthesis and self-assembly of a D3h symmetric polycyclic aromatic hydrocarbon into a rigid 2D honeycomb network

C ₃ symmetric hexa-peri-hexabenzocoronene carboxylic acid assembles into a rigid 2D honeycomb network at a solid–liquid interface.

The STM bias voltage-dependent polymorphism of a binary supramolecular network

We control complex multicomponent switches by tuning the local electric field at the liquid/solid interface.

1,3,5-Benzenetribenzoic Acid on Cu(111) and Graphene/Cu(111): A Comparative STM Study

The self-assembly of 1,3,5-benzenetribenzoic acid (BTB) molecules on both Cu(111) and epitaxial graphene grown on Cu(111) were studied by scanning tunneling microscopy (STM) and low-energy electron diffraction (LEED) under ultrahigh vacuum conditions. On Cu(111), the BTB molecules were found to mainly arrange in close-packed structures through H-bonding between the (partially) deprotonated carboxylic acid groups. In addition, porous structures formed by intact BTB molecules-and also based on H-bonding-were observed. On graphene grown on Cu(111) the BTB molecules mainly form porous structures accompanied by small patches of disordered close-packed structures. Upon annealing, BTB adsorbed on Cu(111) is fully deprotonated and arranges in the close-packed structure while in contrast on graphene/Cu(111) the porous network is exclusively formed. This shows that the molecular self-assembly behavior is highly dependent on the first substrate layer: one graphene layer is sufficient to considerably alter the interplay of molecule substrate and intermolecular interactions in favor of the latter interactions.

Reversible 2D Phase Transition Driven By an Electric Field: Visualization and Control on the Atomic Scale

We report on a reversible structural phase transition of a two-dimensional system that can be locally induced by an external electric field. Two different structural configurations may coexist within a CO monolayer on Cu(111). The balance between the two phases can be shifted by an external electric field, causing the domain boundaries to move, increasing the area of the favored phase controllable both in location and size. If the field is further enhanced new domains nucleate. The arrangement of the CO molecules on the Cu surface is observed in real time and real space with atomic resolution while the electric field driving the phase transition is easily varied over a broad range. Together with the well-known molecular manipulation of CO adlayers, our findings open exciting prospects for combining spontaneous long-range order with man-made CO structures such as "molecule cascades" or "molecular graphene". Our new manipulation mode permits us to bridge the gap between fundamental concepts and the fabrication of arbitrary atomic patterns in large scale, by providing unprecedented insight into the physics of structural phase transitions on the atomic scale.

Structural transition control between dipole–dipole and hydrogen bonds induced chirality and achirality

This study presents efficient strategies on manipulation of hydrogen bonds and dipole–dipole induced chiral and achiral self-assembly nanostructures.

Reversible Local and Global Switching in Multicomponent Supramolecular Networks: Controlled Guest Release and Capture at the Solution/Solid Interface

Dynamically switchable supramolecular systems offer exciting possibilities in building smart surfaces, the structure and thus the function of which can be controlled by using external stimuli. Here we demonstrate an elegant approach where the guest binding ability of a supramolecular surface can be controlled by inducing structural transitions in it. A physisorbed self-assembled network of a simple hydrogen bonding building block is used as a switching platform. We illustrate that the reversible transition between porous and nonporous networks can be accomplished using an electric field or applying a thermal stimulus. These transitions are used to achieve controlled guest release or capture at the solution-solid interface. The electric field and the temperature-mediated methods of guest release are operative at different length scales. While the former triggers the transition and thus guest release at the nanometer scale, the latter is effective over a much larger scale. The flexibility associated with physisorbed self-assembled networks renders this approach an attractive alternative to conventional switchable systems.

Side chain position, length and odd/even effects on the 2D self-assembly of mono-substituted anthraquinone derivatives at the liquid/solid interface

This work provides efficient methods for regulating self-assembled structures by changing the position, length and odd/even properties of the side chains.