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Howlader H, Suzol SH, Blanco K, Martin‐Rafa L, Laverde EE, Liu Y, Wnuk SF. Purine Nucleosides with a Reactive (
β
‐Iodovinyl)sulfone or a (
β
‐Keto)sulfone Group at the C8 Position and Their Polymerase‐Catalyzed Incorporation into DNA. ASIAN J ORG CHEM 2022. [DOI: 10.1002/ajoc.202100764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Hasan Howlader
- Department of Chemistry and Biochemistryan Florida International University Miami Florida 33199 U.S.A
| | - Sazzad H. Suzol
- Department of Chemistry and Biochemistryan Florida International University Miami Florida 33199 U.S.A
| | - Kevin Blanco
- Department of Chemistry and Biochemistryan Florida International University Miami Florida 33199 U.S.A
| | - Lilian Martin‐Rafa
- Department of Chemistry and Biochemistryan Florida International University Miami Florida 33199 U.S.A
| | - Eduardo E. Laverde
- Department of Chemistry and Biochemistryan Florida International University Miami Florida 33199 U.S.A
| | - Yuan Liu
- Department of Chemistry and Biochemistryan Florida International University Miami Florida 33199 U.S.A
- Biomolecular Sciences Institute Florida International University Miami Florida 33199 U.S.A
| | - Stanislaw F. Wnuk
- Department of Chemistry and Biochemistryan Florida International University Miami Florida 33199 U.S.A
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2
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Zhang Y, Vessally E. Direct halosulfonylation of alkynes: an overview. RSC Adv 2021; 11:33447-33460. [PMID: 35497552 PMCID: PMC9042254 DOI: 10.1039/d1ra03443j] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2021] [Accepted: 09/30/2021] [Indexed: 12/31/2022] Open
Abstract
The difunctionalization reactions of easily available and inexpensive alkynes have emerged as a reliable, powerful, and step-economical approach for the construction of highly substituted complex alkenes in a one-pot manner, without the need for isolation of intermediates. A wide variety of transformations based on this concept have been successfully achieved for the preparation of synthetically and biologically important β-halovinyl sulfone scaffolds. In this Review, we summarize the recent advances and developments in this field and present a comprehensive overview of halosulfonylation of alkyne substrates with emphasis on the mechanistic features of the reactions.
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Affiliation(s)
- Yujun Zhang
- School of Chemistry and Environmental Engineering, Hanshan Normal University Chaozhou 521041 Guangdong P. R. China
| | - Esmail Vessally
- Department of Chemistry, Payame Noor University P.O. Box 19395-3697 Tehran Iran
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3
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Min W, Guo G, Yang C, Huo C. Visible light promoted sulfonylation and sulfonylcarbonylation of alkenes. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.152029] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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Shanmugasundaram M, Senthilvelan A, Kore AR. C-5 Substituted Pyrimidine Nucleotides/Nucleosides: Recent Progress in Synthesis, Functionalization, and Applications. CURR ORG CHEM 2019. [DOI: 10.2174/1385272823666190809124310] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The chemistry of C5 substituted pyrimidine nucleotide serves as a versatile molecular
biology probe for the incorporation of DNA/RNA that has been involved in various
molecular biology applications such as gene expression, chromosome, and mRNA
fluorescence in situ hybridization (FISH) experiment, mutation detection on arrays and
microarrays, in situ RT-PCR, and PCR. In addition to C5 substituted pyrimidine nucleotide,
C5 substituted pyrimidine nucleoside displays a broad spectrum of biological applications
such as antibacterial, antiviral and anticancer activities. This review focusses on
the recent development in the synthesis of aminoallyl pyrimidine nucleotide, aminopropargyl
pyrimidine nucleotide, fluorescent probes containing C5 substituted pyrimidine nucleotide,
2′-deoxycytidine nucleoside containing vinylsulfonamide and acrylamide modification,
C5 alkenyl, C5 alkynyl, and C5 aryl pyrimidine nucleosides through palladium-catalyzed reaction,
pyrimidine nucleoside containing triazole moiety through Click reaction, 5-isoxazol-3-yl-pyrimidine nucleoside,
C5 azide modified pyrimidine nucleoside, 2′-deoxycytidine nucleotide containing photocleavable moiety,
and uridine nucleoside containing germane and their biological applications are outlined.
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Affiliation(s)
- Muthian Shanmugasundaram
- Life Sciences Solutions Group, Thermo Fisher Scientific, 2130 Woodward Street, Austin, TX 78744-1832, United States
| | - Annamalai Senthilvelan
- Life Sciences Solutions Group, Thermo Fisher Scientific, 2130 Woodward Street, Austin, TX 78744-1832, United States
| | - Anilkumar R. Kore
- Life Sciences Solutions Group, Thermo Fisher Scientific, 2130 Woodward Street, Austin, TX 78744-1832, United States
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5
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Wen Z, Tuttle PR, Howlader AH, Vasilyeva A, Gonzalez L, Tangar A, Lei R, Laverde EE, Liu Y, Miksovska J, Wnuk SF. Fluorescent 5-Pyrimidine and 8-Purine Nucleosides Modified with an N-Unsubstituted 1,2,3-Triazol-4-yl Moiety. J Org Chem 2019; 84:3624-3631. [PMID: 30806513 DOI: 10.1021/acs.joc.8b03135] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The Cu(I)- or Ag(I)-catalyzed cycloaddition between 8-ethynyladenine or guanine nucleosides and TMSN3 gave 8-(1- H-1,2,3-triazol-4-yl) nucleosides in good yields. On the other hand, reactions of 5-ethynyluracil or cytosine nucleosides with TMSN3 led to the chemoselective formation of triazoles via Cu(I)-catalyzed cycloaddition or vinyl azides via Ag(I)-catalyzed hydroazidation. These nucleosides with a minimalistic triazolyl modification showed excellent fluorescent properties with 8-(1- H-1,2,3-triazol-4-yl)-2'-deoxyadenosine (8-TrzdA), exhibiting a quantum yield of 44%. The 8-TrzdA 5'-triphosphate was incorporated into duplex DNA containing a one-nucleotide gap by DNA polymerase β.
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Affiliation(s)
- Zhiwei Wen
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Paloma R Tuttle
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - A Hasan Howlader
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Anna Vasilyeva
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Laura Gonzalez
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Antonija Tangar
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Ruipeng Lei
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Eduardo E Laverde
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Yuan Liu
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Jaroslava Miksovska
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
| | - Stanislaw F Wnuk
- Department of Chemistry and Biochemistry , Florida International University , Miami , Florida 33199 , United States
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Zhang J, Liang Z, Wang J, Guo Z, Liu C, Xie M. Metal-Free Synthesis of Functionalized Tetrasubstituted Alkenes by Three-Component Reaction of Alkynes, Iodine, and Sodium Sulfinates. ACS OMEGA 2018; 3:18002-18015. [PMID: 31458390 PMCID: PMC6643681 DOI: 10.1021/acsomega.8b02966] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2018] [Accepted: 12/03/2018] [Indexed: 05/15/2023]
Abstract
An operationally simple, efficient, and metal-/peroxide-free three-component reaction of alkynes, iodine, and sodium sulfinates has been developed for the construction of highly functionalized tetrasubstituted alkenes. Iodo- and sulfonyl-containing tetrasubstituted alkenes, such as vinyl ketones, allylic alcohols, and conjugated enynes, could be obtained regio- and stereoselectively in up to 96% yield.
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7
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Wen Z, Peng J, Tuttle PR, Ren Y, Garcia C, Debnath D, Rishi S, Hanson C, Ward S, Kumar A, Liu Y, Zhao W, Glazer PM, Liu Y, Sevilla MD, Adhikary A, Wnuk SF. Electron-Mediated Aminyl and Iminyl Radicals from C5 Azido-Modified Pyrimidine Nucleosides Augment Radiation Damage to Cancer Cells. Org Lett 2018; 20:7400-7404. [PMID: 30457873 PMCID: PMC6465127 DOI: 10.1021/acs.orglett.8b03035] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Two classes of azido-modified pyrimidine nucleosides were synthesized as potential radiosensitizers; one class is 5-azidomethyl-2'-deoxyuridine (AmdU) and cytidine (AmdC), while the second class is 5-(1-azidovinyl)-2'-deoxyuridine (AvdU) and cytidine (AvdC). The addition of radiation-produced electrons to C5-azido nucleosides leads to the formation of π-aminyl radicals followed by facile conversion to σ-iminyl radicals either via a bimolecular reaction involving intermediate α-azidoalkyl radicals in AmdU/AmdC or by tautomerization in AvdU/AvdC. AmdU demonstrates effective radiosensitization in EMT6 tumor cells.
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Affiliation(s)
- Zhiwei Wen
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
| | - Jufang Peng
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
| | - Paloma R. Tuttle
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
| | - Yaou Ren
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
| | - Carol Garcia
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
| | - Dipra Debnath
- Department of Chemistry, Oakland University, Rochester, Michigan 48309, United States
| | - Sunny Rishi
- Department of Chemistry, Oakland University, Rochester, Michigan 48309, United States
| | - Cameron Hanson
- Department of Chemistry, Oakland University, Rochester, Michigan 48309, United States
| | - Samuel Ward
- Department of Chemistry, Oakland University, Rochester, Michigan 48309, United States
| | - Anil Kumar
- Department of Chemistry, Oakland University, Rochester, Michigan 48309, United States
| | - Yanfeng Liu
- Department of Therapeutic Radiology, Yale University School of Medicine, New Haven, Connecticut 06520, United States
| | - Weixi Zhao
- Department of Therapeutic Radiology, Yale University School of Medicine, New Haven, Connecticut 06520, United States
| | - Peter M. Glazer
- Department of Therapeutic Radiology, Yale University School of Medicine, New Haven, Connecticut 06520, United States
| | - Yuan Liu
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
| | - Michael D. Sevilla
- Department of Chemistry, Oakland University, Rochester, Michigan 48309, United States
| | - Amitava Adhikary
- Department of Chemistry, Oakland University, Rochester, Michigan 48309, United States
| | - Stanislaw F. Wnuk
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
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