1
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Rather IA, Ahmad M, Talukdar P, Ali R. Probing and evaluating transmembrane chloride ion transport in double walled trifluorophenyl/phthalimide extended calix[4]pyrrole-based supramolecular receptors. J Mater Chem B 2024; 12:5950-5956. [PMID: 38804847 DOI: 10.1039/d3tb02880a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/29/2024]
Abstract
Therapeutic applications have sparked increased interest in the use of synthetic anion receptors for ion transport across lipid membranes. In this context, the construction of synthetic transmembrane transporters for the physiologically important chloride ion is currently of enormous interest. As a result, considerable effort is being devoted to the design and synthesis of artificial transmembrane chloride ion transporters. However, only inadequate progress has been made in developing macrocyclic chloride ion transporters using the fundamental principles of supramolecular chemistry, and hence this field entails fostering investigations. In this investigation, the synthesis of two new double walled trifluorophenyl/phthalimide extended calix[4]pyrrole (C4P) receptors (3 and 7) has been successfully reported. 1H-NMR titration and HRMS studies confirmed the 1 : 1 binding stoichiometry of the chloride ion with these receptors in the solution phase (only receptor 3b was studied by 1H-NMR). Regarding ion transport of 3b and 7, when studied in the HPTS-based vesicular system, 3b showed better activity with an EC50 value of 0.39 μM. The detailed ion transport studies on 3b have revealed that ion transport occurs through the Cl-/NO3- antiport mode.
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Affiliation(s)
- Ishfaq Ahmad Rather
- Organic and Supramolecular Functional Materials Research Laboratory, Department of Chemistry, Jamia Millia Islamia, Jamia Nagar, Okhla, New Delhi 110025, India.
| | - Manzoor Ahmad
- Department of Chemistry, Indian Institute of Science Education and Research Pune, Pune 411008, Maharashtra, India.
| | - Pinaki Talukdar
- Department of Chemistry, Indian Institute of Science Education and Research Pune, Pune 411008, Maharashtra, India.
| | - Rashid Ali
- Organic and Supramolecular Functional Materials Research Laboratory, Department of Chemistry, Jamia Millia Islamia, Jamia Nagar, Okhla, New Delhi 110025, India.
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2
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Patrick SC, Beer PD, Davis JJ. Solvent effects in anion recognition. Nat Rev Chem 2024; 8:256-276. [PMID: 38448686 DOI: 10.1038/s41570-024-00584-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/25/2024] [Indexed: 03/08/2024]
Abstract
Anion recognition is pertinent to a range of environmental, medicinal and industrial applications. Recent progress in the field has relied on advances in synthetic host design to afford a broad range of potent recognition motifs and novel supramolecular structures capable of effective binding both in solution and at derived molecular films. However, performance in aqueous media remains a critical challenge. Understanding the effects of bulk and local solvent on anion recognition by host scaffolds is imperative if effective and selective detection in real-world media is to be viable. This Review seeks to provide a framework within which these effects can be considered both experimentally and theoretically. We highlight proposed models for solvation effects on anion binding and discuss approaches to retain strong anion binding in highly competitive (polar) solvents. The synthetic design principles for exploiting the aforementioned solvent effects are explored.
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Affiliation(s)
| | - Paul D Beer
- Department of Chemistry, University of Oxford, Oxford, UK
| | - Jason J Davis
- Department of Chemistry, University of Oxford, Oxford, UK.
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3
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Giri M, Dash Y, Guchhait T. Does Larger Cavity-Size Really Help Bigger Anions to Bind? A Scrutiny on Core-Expanded Calix[4]pyrroles and Their Properties. Chempluschem 2024; 89:e202300427. [PMID: 37830245 DOI: 10.1002/cplu.202300427] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Revised: 10/13/2023] [Accepted: 10/13/2023] [Indexed: 10/14/2023]
Abstract
Calix[4]pyrroles are an important class of oligopyrrolic macrocycles and have found applications in many diverse fields including anion recognition. To modulate the properties of the calix[4]pyrrole, several structural modifications are realized. The core-expansion has attracted extra attention as it provides larger cavity-size compared to parent calix[4]pyrrole(s). This review highlights the synthetic development of various core-expanded calix[4]pyrroles and their applications in anion-binding properties. Emphasis is given to the changes in the binding properties observed with expanded versions of calix[4]pyrrole(s) in both solution and the solid states. The expanded versions of calix[4]pyrrole do not always show higher binding affinities for larger anions as anticipated. Rather, they display reduced affinities with the anions. The truncated form or asymmetric nature of the expanded versions of calix[4]pyrrole does not probably allow to access all the available binding sites for the anions and hence reduced binding affinities are observed. The receptors which contain a greater number of binding sites and are somehow rigid or preorganized apparently show enhanced binding affinities for anions. The relative binding constants for halide series indicate that the enlarged molecules are more beneficial for largest iodide among others. However, most of the receptors show selectivity towards smallest fluoride over other anions studied.
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Affiliation(s)
- Monalisa Giri
- Department of Chemistry, C. V. Raman Global University, Bhubaneswar, Odisha 752054, India
| | - Yashaswini Dash
- Department of Chemistry, C. V. Raman Global University, Bhubaneswar, Odisha 752054, India
| | - Tapas Guchhait
- Department of Chemistry, C. V. Raman Global University, Bhubaneswar, Odisha 752054, India
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4
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Ben Toumia I, Bachetti T, Chekir-Ghedira L, Profumo A, Ponassi M, Di Domizio A, Izzotti A, Sciacca S, Puglisi C, Forte S, Giuffrida R, Colarossi C, Milardi D, Grasso G, Lanza V, Fiordoro S, Drago G, Tkachenko K, Cardinali B, Romano P, Iervasi E, Vargas GC, Barboro P, Kohnke FH, Rosano C. Fraisinib: a calixpyrrole derivative reducing A549 cell-derived NSCLC tumor in vivo acts as a ligand of the glycine-tRNA synthase, a new molecular target in oncology. Front Pharmacol 2024; 14:1258108. [PMID: 38235113 PMCID: PMC10791888 DOI: 10.3389/fphar.2023.1258108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 11/17/2023] [Indexed: 01/19/2024] Open
Abstract
Background and purpose: Lung cancer is the leading cause of death in both men and women, constituting a major public health problem worldwide. Non-small-cell lung cancer accounts for 85%-90% of all lung cancers. We propose a compound that successfully fights tumor growth in vivo by targeting the enzyme GARS1. Experimental approach: We present an in-depth investigation of the mechanism through which Fraisinib [meso-(p-acetamidophenyl)-calix(4)pyrrole] affects the human lung adenocarcinoma A549 cell line. In a xenografted model of non-small-cell lung cancer, Fraisinib was found to reduce tumor mass volume without affecting the vital parameters or body weight of mice. Through a computational approach, we uncovered that glycyl-tRNA synthetase is its molecular target. Differential proteomics analysis further confirmed that pathways regulated by Fraisinib are consistent with glycyl-tRNA synthetase inhibition. Key results: Fraisinib displays a strong anti-tumoral potential coupled with limited toxicity in mice. Glycyl-tRNA synthetase has been identified and validated as a protein target of this compound. By inhibiting GARS1, Fraisinib modulates different key biological processes involved in tumoral growth, aggressiveness, and invasiveness. Conclusion and implications: The overall results indicate that Fraisinib is a powerful inhibitor of non-small-cell lung cancer growth by exerting its action on the enzyme GARS1 while displaying marginal toxicity in animal models. Together with the proven ability of this compound to cross the blood-brain barrier, we can assess that Fraisinib can kill two birds with one stone: targeting the primary tumor and its metastases "in one shot." Taken together, we suggest that inhibiting GARS1 expression and/or GARS1 enzymatic activity may be innovative molecular targets for cancer treatment.
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Affiliation(s)
| | | | - Leila Chekir-Ghedira
- Unit of Bioactive Natural Substances and Biotechnology, Faculty of Dental Medicine of Monastir, University of Monastir, Monastir, Tunisia
| | - Aldo Profumo
- IRCCS Ospedale Policlinico San Martino, Genova, Italy
| | - Marco Ponassi
- IRCCS Ospedale Policlinico San Martino, Genova, Italy
| | | | - Alberto Izzotti
- IRCCS Ospedale Policlinico San Martino, Genova, Italy
- Department of Experimental Medicine, University of Genova, Genova, Italy
| | | | | | - Stefano Forte
- Istituto Oncologico del Mediterraneo, Viagrande, Italy
| | | | | | - Danilo Milardi
- Istituto di Cristallografia, Consiglio Nazionale delle Ricerche, Catania, Italy
| | - Giuseppe Grasso
- Department of Chemical Sciences, University of Catania, Catania, Italy
| | - Valeria Lanza
- Istituto di Cristallografia, Consiglio Nazionale delle Ricerche, Catania, Italy
| | - Stefano Fiordoro
- Department of Experimental Medicine, University of Genova, Genova, Italy
| | - Giacomo Drago
- Department of Experimental Medicine, University of Genova, Genova, Italy
| | | | | | - Paolo Romano
- IRCCS Ospedale Policlinico San Martino, Genova, Italy
| | - Erika Iervasi
- IRCCS Ospedale Policlinico San Martino, Genova, Italy
| | | | - Paola Barboro
- IRCCS Ospedale Policlinico San Martino, Genova, Italy
| | - Franz Heinrich Kohnke
- Dipartimento di Scienze Chimiche, Farmaceutiche ed Ambientali (CHIBIOFARAM), University of Messina, Messina, Italy
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5
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Fan Y, He J, Guo S, Jiang H. Host-Guest Chemistry in Binary and Ternary Complexes Utilizing π-Conjugated Carbon Nanorings. Chempluschem 2023:e202300536. [PMID: 38123532 DOI: 10.1002/cplu.202300536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2023] [Revised: 12/12/2023] [Accepted: 12/20/2023] [Indexed: 12/23/2023]
Abstract
The carbon nanorings, possessing a radial π system, have garnered significant attention primarily due to their size-dependent photophysical properties and the presence of a unique curved π-conjugated cavity. This is evidenced by the rapid proliferation of publications. Furthermore, the integration of building blocks into CPP skeletons can confer [n]CPPs with novel and exceptional photophysical and electronic characteristics, as well as chiral properties and host-guest interactions, thereby augmenting the diversity of [n]CPPs. Notably, the curved π surface structures and concave cavity of carbon nanorings enable them to host aromatic or non-aromatic guests with a complementarily curved surface, resulting in interesting binary or ternary complexes. This review provides a comprehensive treatment of literature reports on binary and ternary complexes, focusing on both their host-guest interactions and properties. It is important to note that the scope of this review is limited to host-guest chemistry in binary and ternary complexes based on π-conjugated carbon nanorings.
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Affiliation(s)
- Yanqing Fan
- College of Chemistry, Beijing Normal University, Beijing, 100875, P. R. China
| | - Jing He
- College of Chemistry, Beijing Normal University, Beijing, 100875, P. R. China
| | - Shengzhu Guo
- College of Chemistry, Beijing Normal University, Beijing, 100875, P. R. China
| | - Hua Jiang
- College of Chemistry, Beijing Normal University, Beijing, 100875, P. R. China
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6
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Zhou D, Zhang F, Wang B, He J, Bai Y, Bian H. Anion Recognition in Solution: Insights from Thermodynamics and Ultrafast Structural Dynamics. J Phys Chem Lett 2023:11183-11189. [PMID: 38055627 DOI: 10.1021/acs.jpclett.3c02996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2023]
Abstract
Anion recognition through noncovalent interactions stands as an emerging field in supramolecular chemistry, exerting a profound influence on the regulation of biological functions. Herein, the thermodynamics of complexation between sodium cyanate (NaOCN) and calix[4]pyrrole was systematically investigated by linear and nonlinear IR spectroscopy, highlighting enthalpy changes as the dominant driving force. The overall orientational relaxation of bound anion can be described by an Arrhenius-type activated process, yielding an activation energy of 15.0 ± 1.0 kJ mol-1. The structural dynamics of contact ion pairs (CIPs) formed between Na+ and OCN- in solution showed a negligible temperature effect, suggesting entropy changes as the principal governing factor. Further analysis revealed that anion recognition in solution is mediated by conformational changes of the receptor and collective rearrangement of hydrogen bond dynamics. This study, framed within the paradigms of thermodynamics and ultrafast structural dynamics, substantially advances our comprehension of the microscopic mechanisms underlying anion recognition in the realm of supramolecular chemistry.
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Affiliation(s)
- Dexia Zhou
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, China
| | - Fang Zhang
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, China
| | - Baihui Wang
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, China
| | - Jiman He
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, China
| | - Yimin Bai
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, China
| | - Hongtao Bian
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, China
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7
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Plais R, Gouarin G, Bournier A, Zayene O, Mussard V, Bourdreux F, Marrot J, Brosseau A, Gaucher A, Clavier G, Salpin JY, Prim D. Chloride Binding Modulated by Anion Receptors Bearing Tetrazine and Urea. Chemphyschem 2023; 24:e202200524. [PMID: 36111796 PMCID: PMC10091995 DOI: 10.1002/cphc.202200524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2022] [Revised: 09/15/2022] [Indexed: 01/20/2023]
Abstract
Modulation and fine-tuning of the strength of weak interactions to bind anions are described in a series of synthetic receptors. The general design of the receptors includes both a urea motif and a tetrazine motif. The synthetic sequence towards three receptors is detailed. Impacts of H-bond strength and linker length between urea and tetrazine on chloride complexation are studied. Binding properties of the chloride anion are examined in both the ground and excited states using a panel of analytical methods (NMR spectroscopy, mass spectrometry, UV/Visible spectroscopies, and fluorescence). A ranking of the receptors by complexation strength has been determined, allowing a better understanding of the structure-properties relationship on these compounds.
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Affiliation(s)
- Romain Plais
- Institut Lavoisier de Versailles, Université Paris-Saclay, UVSQ, CNRS, 78000, Versailles, France
| | - Guy Gouarin
- Institut Lavoisier de Versailles, Université Paris-Saclay, UVSQ, CNRS, 78000, Versailles, France
| | - Amélie Bournier
- LAMBE, Université Paris-Saclay, Univ Evry, CNRS, 91025, Evry-Courcouronnes, France.,LAMBE, CY Cergy Paris Université, CNRS, 95000, Cergy, France
| | - Olfa Zayene
- Institut Lavoisier de Versailles, Université Paris-Saclay, UVSQ, CNRS, 78000, Versailles, France
| | - Vanessa Mussard
- Institut Lavoisier de Versailles, Université Paris-Saclay, UVSQ, CNRS, 78000, Versailles, France
| | - Flavien Bourdreux
- Institut Lavoisier de Versailles, Université Paris-Saclay, UVSQ, CNRS, 78000, Versailles, France
| | - Jérome Marrot
- Institut Lavoisier de Versailles, Université Paris-Saclay, UVSQ, CNRS, 78000, Versailles, France
| | - Arnaud Brosseau
- PPSM, Université Paris-Saclay, ENS Paris-Saclay, CNRS, 91190, Gif-sur-Yvette, France
| | - Anne Gaucher
- Institut Lavoisier de Versailles, Université Paris-Saclay, UVSQ, CNRS, 78000, Versailles, France
| | - Gilles Clavier
- PPSM, Université Paris-Saclay, ENS Paris-Saclay, CNRS, 91190, Gif-sur-Yvette, France
| | - Jean-Yves Salpin
- LAMBE, Université Paris-Saclay, Univ Evry, CNRS, 91025, Evry-Courcouronnes, France.,LAMBE, CY Cergy Paris Université, CNRS, 95000, Cergy, France
| | - Damien Prim
- Institut Lavoisier de Versailles, Université Paris-Saclay, UVSQ, CNRS, 78000, Versailles, France
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8
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Zhang W, Zhao J, Yang D. Anion-Coordination-Driven Assembly: From Discrete Supramolecular Self-Assemblies to Functional Soft Materials. Chempluschem 2022; 87:e202200294. [PMID: 36410745 DOI: 10.1002/cplu.202200294] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Revised: 10/18/2022] [Indexed: 01/31/2023]
Abstract
Anion templated assembly of supramolecular systems has been extensively explored in previous reports, whereas anions serve only as an auxiliary and spectator role. With the development of anion coordination chemistry in recent years, anion coordination-driven assembly (ACDA) has emerged as a new strategy for the construction of supramolecular self-assemblies. Anions are proved to exist as the main actors in the construction of supramolecular architectures, i. e., serve as the coordination center. This Review will focus on the recent progress in anion-coordination-driven assembly of discrete supramolecular architectures, such as helicates, polyhedrons and polygons, and the various applications of 'aniono'-systems. At the end of this Review, we highlight current challenges and opportunities for future research of anion-coordination-driven self-assembly.
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Affiliation(s)
- Wenyao Zhang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China.,Key Laboratory of Magnetic Molecules and Magnetic Information Materials (Ministry of Education), School of Chemistry and Material Science, Shanxi Normal University, Taiyuan, 030006, P. R. China
| | - Jie Zhao
- School of Chemistry and Chemical Engineering, Xi'an University of Architecture and Technology, Xi'an, 710055, P. R. China
| | - Dong Yang
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an, 710069, P. R. China
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9
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K N, Singh A, Shetty AN, Trivedi DR. Chromogenic detection of fluoride, dihydrogen phosphate, and arsenite anions based on 2,4-dinitrophenyl hydrazine receptors: spectral and electrochemical study. Supramol Chem 2022. [DOI: 10.1080/10610278.2022.2087524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Nagaraj K
- Material Science Laboratory, Department of Chemistry, National Institute of Technology Karnataka (NITK) Surathkal, Srinivasnagar, India
- Supramolecular Chemistry Laboratory, Department of Chemistry, National Institute of Technology Karnataka (NITK) Surathkal, Srinivasnagar, India
| | - Archana Singh
- Supramolecular Chemistry Laboratory, Department of Chemistry, National Institute of Technology Karnataka (NITK) Surathkal, Srinivasnagar, India
| | - A. Nityananda Shetty
- Material Science Laboratory, Department of Chemistry, National Institute of Technology Karnataka (NITK) Surathkal, Srinivasnagar, India
| | - Darshak R. Trivedi
- Supramolecular Chemistry Laboratory, Department of Chemistry, National Institute of Technology Karnataka (NITK) Surathkal, Srinivasnagar, India
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10
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Reek JNH, de Bruin B, Pullen S, Mooibroek TJ, Kluwer AM, Caumes X. Transition Metal Catalysis Controlled by Hydrogen Bonding in the Second Coordination Sphere. Chem Rev 2022; 122:12308-12369. [PMID: 35593647 PMCID: PMC9335700 DOI: 10.1021/acs.chemrev.1c00862] [Citation(s) in RCA: 28] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Transition metal catalysis is of utmost importance for the development of sustainable processes in academia and industry. The activity and selectivity of metal complexes are typically the result of the interplay between ligand and metal properties. As the ligand can be chemically altered, a large research focus has been on ligand development. More recently, it has been recognized that further control over activity and selectivity can be achieved by using the "second coordination sphere", which can be seen as the region beyond the direct coordination sphere of the metal center. Hydrogen bonds appear to be very useful interactions in this context as they typically have sufficient strength and directionality to exert control of the second coordination sphere, yet hydrogen bonds are typically very dynamic, allowing fast turnover. In this review we have highlighted several key features of hydrogen bonding interactions and have summarized the use of hydrogen bonding to program the second coordination sphere. Such control can be achieved by bridging two ligands that are coordinated to a metal center to effectively lead to supramolecular bidentate ligands. In addition, hydrogen bonding can be used to preorganize a substrate that is coordinated to the metal center. Both strategies lead to catalysts with superior properties in a variety of metal catalyzed transformations, including (asymmetric) hydrogenation, hydroformylation, C-H activation, oxidation, radical-type transformations, and photochemical reactions.
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Affiliation(s)
- Joost N H Reek
- Homogeneous and Supramolecular Catalysis, Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands.,InCatT B.V., Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Bas de Bruin
- Homogeneous and Supramolecular Catalysis, Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Sonja Pullen
- Homogeneous and Supramolecular Catalysis, Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Tiddo J Mooibroek
- Homogeneous and Supramolecular Catalysis, Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | | | - Xavier Caumes
- InCatT B.V., Science Park 904, 1098 XH Amsterdam, The Netherlands
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11
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Zhang Z, Chen G, Pan W, Bi Y, Shen S, Cao X, Pang X, Zhu Y. Novel indoleoxazine derivative cyanide ion probe: Detection applications and cell-imaging studies. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.131893] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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12
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K N, Shetty AN, Trivedi DR. Recent advances in the fluorescent and colorimetric detection of dihydrogen phosphate. Supramol Chem 2022. [DOI: 10.1080/10610278.2022.2035387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Nagaraj K
- Material Science Laboratory, National Institute of Technology Karnataka (NITK) Surathkal, Mangalore, India
- Supramolecular Chemistry Laboratory, Department of Chemistry, National Institute of Technology Karnataka (NITK) Surathkal, - Mangalore, India
| | - A. Nityananda Shetty
- Material Science Laboratory, National Institute of Technology Karnataka (NITK) Surathkal, Mangalore, India
| | - Darshak R. Trivedi
- Supramolecular Chemistry Laboratory, Department of Chemistry, National Institute of Technology Karnataka (NITK) Surathkal, - Mangalore, India
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13
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Arafa WAA, Ghoneim AA, Mourad AK. N-Naphthoyl Thiourea Derivatives: An Efficient Ultrasonic-Assisted Synthesis, Reaction, and In Vitro Anticancer Evaluations. ACS OMEGA 2022; 7:6210-6222. [PMID: 35224384 PMCID: PMC8867804 DOI: 10.1021/acsomega.1c06718] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 01/28/2022] [Indexed: 05/13/2023]
Abstract
This work demonstrates the optimization of an efficient, mild, and environmentally friendly synthetic approach to access a diverse library of N-naphthoyl thioureas. These derivatives could be exploited as precursor scaffolds for designing valuable heterocycles with anticipated biological activities. Additionally, the utilization of a copper complex derived from the newly synthesized N-naphthoyl thiourea ligand in the photodegradation of methyl orange (MO) dye was explored. The antiproliferative effect of the synthesized derivatives was examined against MCF-7, HCT116, and A549 cancer cell lines. Most of the assembled derivatives revealed a significant cytotoxic effect, in some cases, greater than doxorubicin. Of these, the copper complex demonstrated significant antitumor activities (IC50 < 1.3 μM) and lesser cytotoxic impact (IC50 > 76 μM), indicating its possibility as a pioneering candidate for future carcinogenic pharmaceutics. Relations between the structure and activity also have been addressed.
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Affiliation(s)
- Wael Abdelgayed Ahmed Arafa
- Chemistry
Department, College of Science, Jouf University, P. O. Box 2014, Sakaka 2014 Jouf, Kingdom
of Saudi Arabia
| | - Amira Atef Ghoneim
- Chemistry
Department, College of Science, Jouf University, P. O. Box 2014, Sakaka 2014 Jouf, Kingdom
of Saudi Arabia
| | - Asmaa K. Mourad
- Chemistry
Department, Faculty of Science, Fayoum University, P.O. Box 63514, Fayoum 63514, Egypt
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14
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Zhou D, Zhao B, Bai Y, Mukherjee S, Liu J, Bian H, Fang Y. Exploring the Structure and Complexation Dynamics of Azide Anion Recognition by Calix[4]pyrroles in Solution. J Phys Chem Lett 2022; 13:669-675. [PMID: 35023744 DOI: 10.1021/acs.jpclett.1c03962] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
The structure and anion recognition dynamics between calix[4]pyrroles and azide (N3-) anions in the form of its TBA+ and Na+ salts were investigated in dimethyl sulfoxide solutions by Fourier transform infrared (FTIR) spectroscopy and ultrafast IR spectroscopy. Vibrational energy redistribution of the N3- anion in the complex is accelerated through hydrogen bonding interactions with the N-H proton of the receptor. Rotational dynamics of the bound N3- is greatly restricted, demonstrating a distinct countercation effect. The detailed binding modes of N3- with the receptor were further evaluated by the density functional theoretical (DFT) calculations and nuclear magnetic resonance (NMR) spectroscopy. All of these measurements support the notion that the calix[4]pyrroles are capable of capturing the azide anion in solution. However, the calix[4]pyrroles may not necessarily undergo a conformational change to a cone-like geometry when they bind to the azide anion in the solution.
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Affiliation(s)
- Dexia Zhou
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Boxu Zhao
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Yimin Bai
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Somnath Mukherjee
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Jing Liu
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Hongtao Bian
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Yu Fang
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
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15
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Zaleskaya-Hernik M, Dobrzycki Ł, Karbarz M, Romański J. Fluorescence Recognition of Anions Using a Heteroditopic Receptor: Homogenous and Two-Phase Sensing. Int J Mol Sci 2021; 22:13396. [PMID: 34948192 PMCID: PMC8703701 DOI: 10.3390/ijms222413396] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Revised: 12/07/2021] [Accepted: 12/08/2021] [Indexed: 11/17/2022] Open
Abstract
In contrast to monotopic receptor 3, the anthracene functionalized squaramide dual-host receptor 1 is capable of selectively extracting sulfate salts, as was evidenced unambiguously by DOSY, mass spectrometry, fluorescent and ion chromatography measurements. The receptors were investigated in terms of anion and ion pair binding using the UV-vis and 1H NMR titrations method in acetonitrile. The reference anion receptor 3, lacking a crown ether unit, was found to lose the enhancement in anion binding induced by the presence of cations. Besides the ability to bind anions in an enhanced manner exhibited by ion pair receptors 2 and 4, changing the 1-aminoanthracene substituent resulted in their exhibiting a lower anion affinity than receptor 1. By using receptor 1 and adjusting the water content in organic phase it was possible to selectively detect sulfates both by "turn-off" and "turn-on" fluorescence, and to do so homogenously and under interfacial conditions. Such properties of receptor 1 have allowed the development of a new type of sensor capable of recognizing and extracting potassium sulfate from the aqueous medium across a phase boundary, resulting in an appropriate fluorescent response in the organic solution.
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Affiliation(s)
| | | | | | - Jan Romański
- Faculty of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warsaw, Poland; (M.Z.-H.); (Ł.D.); (M.K.)
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16
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Prabha D, Singh D, Kumar P, Gupta R. Selective Detection of Picric Acid and Pyrosulfate Ion by Nickel Complexes Offering a Hydrogen-Bonding-Based Cavity. Inorg Chem 2021; 60:17889-17899. [PMID: 34809423 DOI: 10.1021/acs.inorgchem.1c02479] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
This work describes the synthesis and characterization of three mononuclear nickel complexes supported with amide-based pincer ligands. All three complexes presented an H-bonding-based cavity due to the migration of amidic protons to the appended heterocyclic rings that formed H-bonds with the metal-ligated solvent molecule(s). These complexes functioned as the nanomolar chemosensors for the detection of picric acid and pyrosulfate ion as inferred by the detailed absorption and emission spectral studies while further supported with FTIR, NMR, and mass spectra of the isolated products. We also illustrate a few practical detection methods for the sensing of picric acid in the solution state as the naked-eye colorimetric methods and in the solid state by employing polystyrene films.
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Affiliation(s)
- Divya Prabha
- Department of Chemistry, University of Delhi, Delhi 110007, India
| | - Devender Singh
- Department of Chemistry, University of Delhi, Delhi 110007, India
| | - Pramod Kumar
- Department of Chemistry, University of Delhi, Delhi 110007, India
| | - Rajeev Gupta
- Department of Chemistry, University of Delhi, Delhi 110007, India
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17
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Sandler I, Sharma S, Chan B, Ho J. Accurate Quantum Chemical Prediction of Gas-Phase Anion Binding Affinities and Their Structure-Binding Relationships. J Phys Chem A 2021; 125:9838-9851. [PMID: 34739245 DOI: 10.1021/acs.jpca.1c06648] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
This paper systematically examines the performance of contemporary wavefunction and density functional theory methods to identify robust and cost-efficient methods for predicting gas-phase anion binding energies. This includes the local coupled cluster LNO-CCSD(T) and DLPNO-CCSD(T), as well as double-hybrid DSD-PBEP86-D3(BJ) and various hybrid functionals M06-2X, B3LYP-D3(BJ), ωB97M-V, and ωB97X-V. The focus is on dual-hydrogen-bonding anion receptors that are commonly found in supramolecular chemistry and organocatalysis, namely, (thio)ureas, deltamides, (thio)squaramides, and croconamides as well as the yet-to-be-explored rhodizonamides. Of the methods examined, M06-2X emerged as the overall best performing method as the other functionals including DSD-PBEP86-D3(BJ) and the local coupled cluster DLPNO-CCSD(T) method displayed systematic errors that increase with the degree of carbonylation of the receptors. Hybrid ONIOM models that employed semiempirical methods (PM7, GFN1-xTB, and GFN2-xTB) and "threefold"-corrected small-basis set potentials (HF-3c, B97-3c, and PBEh-3c) were explored, and the best models resulted in 50- to 500-fold reduction in CPU time compared to W1-local. These calculations provide important insight into the structure-binding relationships where there is a direct correlation between Brønsted acidity and anion binding affinity, though the strength of the correlation also depends on other factors such as hydrogen-bonding geometry and the geometrical distortion that the receptor needs to undergo to bind the anion.
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Affiliation(s)
- Isolde Sandler
- School of Chemistry, The University of New South Wales, Sydney, New South Wales 2052, Australia
| | - Shaleen Sharma
- School of Chemistry, The University of New South Wales, Sydney, New South Wales 2052, Australia
| | - Bun Chan
- Graduate School of Engineering, Nagasaki University, Bukyo-Machi 1-14, Nagasaki 852-8521, Japan
| | - Junming Ho
- School of Chemistry, The University of New South Wales, Sydney, New South Wales 2052, Australia
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18
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Bunchuay T, Boonpalit K, Docker A, Ruengsuk A, Tantirungrotechai J, Sukwattanasinitt M, Surawatanawong P, Beer PD. Charge neutral halogen bonding tetradentate-iodotriazole macrocycles capable of anion recognition and sensing in highly competitive aqueous media. Chem Commun (Camb) 2021; 57:11976-11979. [PMID: 34708850 DOI: 10.1039/d1cc05037k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
A series of neutral tetradentate halogen bonding (XB) macrocycles, comprising of two bis-iodotriazole XB donors were synthesised in 60-70% yields via a stepwise CuAAC-mediated cyclisation strategy. Extensive 1H NMR anion titration experiments reveal halide binding affinities are critically dependent on the substitution pattern of the xylyl spacer unit. The meta-substituted macrocycle remarkably displays cooperative tetradentate XB-halide anion recognition in highly competitive 40% aqueous-organic D2O/acetone-d6 (40 : 60, v/v) solvent mixtures. Integration of para-xylyl and naphthyl spacer units generates extended macrocyclic cavities, capable of selective oxalate recognition. Furthermore, preliminary fluorescence exeperiments reveal dicarboxylate specific sensing can be achieved through monitoring of the naphthylene centred emission.
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Affiliation(s)
- Thanthapatra Bunchuay
- Department of Chemistry and Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Bangkok, 10400, Thailand.
| | - Kajjana Boonpalit
- Department of Chemistry and Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Bangkok, 10400, Thailand.
| | - Andrew Docker
- Department of Chemistry, University of Oxford Chemistry Research Laboratory Mansfield Road, Oxford OX1 3TA, UK.
| | - Araya Ruengsuk
- Department of Chemistry and Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Bangkok, 10400, Thailand.
| | - Jonggol Tantirungrotechai
- Department of Chemistry and Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Bangkok, 10400, Thailand.
| | | | - Panida Surawatanawong
- Department of Chemistry and Center of Excellence for Innovation in Chemistry (PERCH-CIC), Faculty of Science, Mahidol University, Bangkok, 10400, Thailand.
| | - Paul D Beer
- Department of Chemistry, University of Oxford Chemistry Research Laboratory Mansfield Road, Oxford OX1 3TA, UK.
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19
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Parman E, Lõkov M, Järviste R, Tshepelevitsh S, Semenov NA, Chulanova EA, Salnikov GE, Prima DO, Slizhov YG, Leito I, Zibarev AV. Acid-Base and Anion Binding Properties of Tetrafluorinated 1,3-Benzodiazole, 1,2,3-Benzotriazole and 2,1,3-Benzoselenadiazole. Chemphyschem 2021; 22:2329-2335. [PMID: 34397136 DOI: 10.1002/cphc.202100475] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Revised: 07/30/2021] [Indexed: 11/06/2022]
Abstract
The influence of fluorination on the acid-base properties and the capacity of structurally related 6-5 bicyclic compounds - 1,3-benzodiazole 1, 1,2,3-benzotriazole 2 and 2,1,3-benzoselenadiazole 3 to σ-hole interactions, i. e. hydrogen (1 and 2) and chalcogen (3) bondings, is studied experimentally and computationally. The tetrafluorination increases the Brønsted acidity of the diazole and triazole scaffolds and the Lewis acidity of selenadiazole scaffold decreases the basicity. Increased Brønsted acidity facilitates anion binding via the formation of hydrogen bonds; particularly, tetrafluorinated derivative of 1 (compound 4) binds Cl- . Increased Lewis acidity of tetrafluorinated derivative of 3 (compound 10), however, is not enough for binding with Cl- and F- via chalcogen bonds in contrast to previously studied Te analog of 10. It is suggested that the maximum positive values of molecular electrostatic potential at the σ-holes, VS,max , can be a reasonable metric for design and synthesis of new anion receptors with selenadiazole-diazole/triazole hybrids as a special target. Related chlorinated compounds are also discussed.
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Affiliation(s)
- Elisabeth Parman
- Institute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia
| | - Märt Lõkov
- Institute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia
| | - Robert Järviste
- Institute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia
| | - Sofja Tshepelevitsh
- Institute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia
| | - Nikolay A Semenov
- Institute of Organic Chemistry, Siberian Branch, Russian Academy of Sciences, 9 Lavrentiev Avenue, 630090, Novosibirsk, Russia
| | - Elena A Chulanova
- Institute of Organic Chemistry, Siberian Branch, Russian Academy of Sciences, 9 Lavrentiev Avenue, 630090, Novosibirsk, Russia
| | - Georgy E Salnikov
- Institute of Organic Chemistry, Siberian Branch, Russian Academy of Sciences, 9 Lavrentiev Avenue, 630090, Novosibirsk, Russia
| | - Darya O Prima
- Institute of Organic Chemistry, Siberian Branch, Russian Academy of Sciences, 9 Lavrentiev Avenue, 630090, Novosibirsk, Russia.,Present address: Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Avenue, 119991, Moscow, Russia
| | - Yuri G Slizhov
- Department of Chemistry, National Research University - Tomsk State University, 36 Lenin Avenue, 634050, Tomsk, Russia
| | - Ivo Leito
- Institute of Chemistry, University of Tartu, Ravila 14a, 50411, Tartu, Estonia
| | - Andrey V Zibarev
- Institute of Organic Chemistry, Siberian Branch, Russian Academy of Sciences, 9 Lavrentiev Avenue, 630090, Novosibirsk, Russia
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20
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Ousaka N, Yamamoto S, Iida H, Iwata T, Ito S, Souza R, Hijikata Y, Irle S, Yashima E. Encapsulation of Aromatic Guests in the Bisporphyrin Cavity of a Double-Stranded Spiroborate Helicate: Thermodynamic and Kinetic Studies and the Encapsulation Mechanism. J Org Chem 2021; 86:10501-10516. [PMID: 34282918 DOI: 10.1021/acs.joc.1c01155] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
A double-stranded spiroborate helicate bearing a bisporphyrin unit in the middle forms an inclusion complex with electron-deficient aromatic guests that are sandwiched between the porphyrins. In the present study, we systematically investigated the effects of size, electron density, and substituents of a series of aromatic guests on inclusion complex formations within the bisporphyrin. The thermodynamic and kinetic behaviors during the guest-encapsulation process were also investigated in detail. The guest-encapsulation abilities in the helicate increased with the increasing core sizes of the electron-deficient aromatic guests and decreased with the increasing bulkiness and number of substituents of the guests. Among the naphthalenediimide derivatives, those with bulky N-substituents at both ends hardly formed an inclusion complex. Instead, they formed a [2]rotaxane-like inclusion complex through the water-mediated dynamic B-O bond cleavage/reformation of the spiroborate groups of the helicate, which enhanced the conformational flexibility of the helicate to enlarge the bisporphyrin cavity and form an inclusion complex. Based on the X-ray crystal structure of a unique pacman-like 1:1 inclusion complex between the helicate and an ammonium cation as well as the molecular dynamics simulation results, a plausible mechanism for the inclusion of a planar aromatic guest within the helicate is also proposed.
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Affiliation(s)
- Naoki Ousaka
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.,Department of Molecular and Macromolecular Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan
| | - Shinya Yamamoto
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan
| | - Hiroki Iida
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan
| | - Takuya Iwata
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan
| | - Shingo Ito
- Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan
| | - Rafael Souza
- Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan
| | - Yuh Hijikata
- Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.,Institute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Nagoya 464-8601, Japan
| | - Stephan Irle
- Department of Chemistry, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.,Institute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Nagoya 464-8601, Japan
| | - Eiji Yashima
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan.,Department of Molecular and Macromolecular Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8603, Japan
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21
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Wang T, Liu J, Cao X. Revealing the Dynamic Process of Ion Pair Recognition by Calix[4]pyrrole: A Case Study of Cesium Chloride. J Phys Chem Lett 2021; 12:3253-3259. [PMID: 33764069 DOI: 10.1021/acs.jpclett.1c00628] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Ion pair receptors based on meso-octamethylcalix[4]pyrrole (CP) have been extensively investigated over recent years. However, the nature of their ion pair recognition has barely been reported, even for CP itself. Herein, cesium chloride was used as a guest ion pair to investigate the dynamic process of ion pair recognition by CP, and the "capture-bind" mechanism for this process is proposed for the first time. The results reveal that Cs+ can be first captured by Cl- at long distances, and then it is bound to the cavity through almost equal contributions of Cl- and CP. Although the effective charge of Cl- is obviously reduced by charge-transfer, the electrostatic interactions between Cl- and Cs+ are still strong even at long distances in the presence of CP.
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Affiliation(s)
- Teng Wang
- School of Chemistry and Pharmaceutical Engineering, Shandong First Medical University & Shandong Academy of Medical Sciences, Taian, 271016, P. R. China
| | - Jingjing Liu
- School of Chemistry and Chemical Engineering, Taishan University, Taian, 271021, P. R. China
| | - Xiaoqun Cao
- School of Chemistry and Pharmaceutical Engineering, Shandong First Medical University & Shandong Academy of Medical Sciences, Taian, 271016, P. R. China
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22
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Zaleskaya M, Jagleniec D, Romański J. Macrocyclic squaramides as ion pair receptors and fluorescent sensors selective towards sulfates. Dalton Trans 2021; 50:3904-3915. [PMID: 33635308 DOI: 10.1039/d0dt04273k] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Through the high dilution technique, we obtained macrocyclic ion pair receptors R1 and R2, an anion receptor R3, and a fluorescent sensor R4 using a combination of particular members of simple libraries consisting of synthesized diamines and methyl squarates, respectively. The receptors were investigated in terms of anion and ion pair binding using the 1H NMR titration method in DMSO-d6. We found that the major contribution to the anion binding comes from the interaction with the squaramide protons rather than with the amide functions of the receptors. The receptors demonstrated the highest affinity towards benzoates and sulfates over the anions tested, and in the case of sulfate binding more complex equilibria in solution were observed. Unlike the anion receptor R3, the ion pair receptor R1 was found to recognize anions in an enhanced manner with the assistance of sodium or potassium cations. Tethering of a simple fluorophore in close proximity to the amide function of receptor R4 resulted in an optical ion pair sensor selective towards sulfates. DFT calculations carried out for the 1 : 1 complexes of R3 with the anions helped clarify this selectivity, showing more effective participation of tetrahedral sulfate anions in binding with the amide function than in the case of benzoates or chlorides.
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Affiliation(s)
- Marta Zaleskaya
- Faculty of Chemistry, University of Warsaw, Pasteura 1, PL 02-093 Warsaw, Poland.
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23
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Saha P, Kumari Agarwala P, Dadhich R, Adhyapak P, Kapoor S, Madhavan N. Ligand Induced Cu II Transport Restricts Cancer and Mycobacterial Growth: Towards a Plug-and-Select Ion Channel Scaffold. Chembiochem 2021; 22:1424-1429. [PMID: 33347676 DOI: 10.1002/cbic.202000731] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2020] [Revised: 12/01/2020] [Indexed: 11/09/2022]
Abstract
Synthetic channels with high ion selectivity are attractive drug targets for diseases involving ion dysregulation. Achieving selective transport of divalent ions is highly challenging due their high hydration energies. A small tripeptide amphiphilic scaffold installed with a pybox ligand selectively transports CuII ions across membranes. The peptide forms stable dimeric pores in the membrane and transports ions by a Cu2+ /H+ antiport mechanism. The ligand-induced excellent CuII selectivity as well as high membrane permeability of the peptide is exploited to promote cancer cell death. The peptide's ability to restrict mycobacterial growth serves as seeds to evolve antibacterial strategies centred on selectively modulating ion homeostasis in pathogens. This simple peptide can potentially function as a universal, yet versatile, scaffold wherein the ion selectivity can be precisely controlled by modifying the ligand at the C terminus.
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Affiliation(s)
- Parichita Saha
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Prema Kumari Agarwala
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Ruchika Dadhich
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Pranav Adhyapak
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Shobhna Kapoor
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Nandita Madhavan
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
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24
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Highly Efficient, Tripodal Ion-Pair Receptors for Switching Selectivity between Acetates and Sulfates Using Solid-Liquid and Liquid-Liquid Extractions. Int J Mol Sci 2020; 21:ijms21249465. [PMID: 33322738 PMCID: PMC7764408 DOI: 10.3390/ijms21249465] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Revised: 12/07/2020] [Accepted: 12/09/2020] [Indexed: 11/18/2022] Open
Abstract
A tripodal, squaramide-based ion-pair receptor 1 was synthesized in a modular fashion, and 1H NMR and UV-vis studies revealed its ability to interact more efficiently with anions with the assistance of cations. The reference tripodal anion receptor 2, lacking a crown ether unit, was found to lose the enhancement in anion binding induced by presence of cations. Besides the ability to bind anions in enhanced manner by the “single armed” ion-pair receptor 3, the lack of multiple and prearranged binding sites resulted in its much lower affinity towards anions than in the case of tripodal receptors. Unlike with receptors 2 or 3, the high affinity of 1 towards salts opens up the possibility of extracting extremely hydrophilic sulfate anions from aqueous to organic phase. The disparity in receptor 1 binding modes towards monovalent anions and divalent sulfates assures its selectivity towards sulfates over other lipophilic salts upon liquid–liquid extraction (LLE) and enables the Hofmeister bias to be overcome. By changing the extraction conditions from LLE to SLE (solid–liquid extraction), a switch of selectivity from sulfates to acetates was achieved. X-ray measurements support the ability of anion binding by cooperation of the arms of receptor 1 together with simultaneous binding of cations.
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25
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New tripodal ligand on the triphenylphosphine oxide platform with 1,2,3-triazole side arms: synthesis, structure, coordination, and extraction properties. MONATSHEFTE FUR CHEMIE 2020. [DOI: 10.1007/s00706-020-02702-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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26
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Facilitated Diffusion of Proline across Membranes of Liposomes and Living Cells by a Calix[4]pyrrole Cavitand. Chem 2020. [DOI: 10.1016/j.chempr.2020.08.018] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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27
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Baulina TV, Kudryavtsev IY, Artem’ev AV, Bagryanskaya IY, Pasechnik MP, Brel VK. Synthesis, Molecular, and Crystal Structure of Tris(2-carbamoylmethoxyphenyl)phosphine Oxide. RUSS J GEN CHEM+ 2020. [DOI: 10.1134/s1070363220100059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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28
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Kutus B, Zhu J, Luo J, Wang Q, Lupan A, Attia AAA, Wang D, Hunger J. Enhancement of Ion Pairing of Sr(II) and Ba(II) Salts by a Tritopic Ion-Pair Receptor in Solution. Chemphyschem 2020; 21:1957-1965. [PMID: 32643260 PMCID: PMC7540308 DOI: 10.1002/cphc.202000507] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 07/04/2020] [Indexed: 12/12/2022]
Abstract
Tritopic ion-pair receptors can bind bivalent salts in solution; yet, these salts have a tendency to form ion-pairs even in the absence of receptors. The extent to which such receptors can enhance ion pairing has however remained elusive. Here, we study ion pairing of M2+ (Ba2+ , Sr2+ ) and X- (I- , ClO4- ) in acetonitrile with and without a dichlorooxacalix[2]arene[2]triazine-related receptor containing a pentaethylene-glycol moiety. We find marked ion association already in receptor-free solutions. When present, most of the MX+ ion-pairs are bound to the receptor and the overall degree of ion association is enhanced due to coordinative, hydrogen-bonding, and anion-π interactions. The receptor shows higher selectivity for iodides but also stabilizes perchlorates, despite the latter are often considered as weakly coordinating anions. Our results show that ion-pair binding is strongly correlated to ion pairing in these solutions, thereby highlighting the importance of taking ion association in organic solvents into account.
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Affiliation(s)
- Bence Kutus
- Department of Molecular SpectroscopyMax Planck Institute for Polymer Research55128MainzGermany
| | - Jun Zhu
- Beijing National Laboratory for Molecular SciencesCAS Key Laboratory of Molecular Recognition and FunctionInstitute of ChemistryUniversity of Chinese Academy of SciencesChinese Academy of SciencesBeijing100190China
| | - Jian Luo
- Beijing National Laboratory for Molecular SciencesCAS Key Laboratory of Molecular Recognition and FunctionInstitute of ChemistryUniversity of Chinese Academy of SciencesChinese Academy of SciencesBeijing100190China
| | - Qi‐Qiang Wang
- Beijing National Laboratory for Molecular SciencesCAS Key Laboratory of Molecular Recognition and FunctionInstitute of ChemistryUniversity of Chinese Academy of SciencesChinese Academy of SciencesBeijing100190China
| | - Alexandru Lupan
- Faculty of Chemistry and Chemical EngineeringBabeş-Bolyai University400028Cluj-NapocaRomania
| | - Amr A. A. Attia
- Faculty of Chemistry and Chemical EngineeringBabeş-Bolyai University400028Cluj-NapocaRomania
| | - De‐Xian Wang
- Beijing National Laboratory for Molecular SciencesCAS Key Laboratory of Molecular Recognition and FunctionInstitute of ChemistryUniversity of Chinese Academy of SciencesChinese Academy of SciencesBeijing100190China
| | - Johannes Hunger
- Department of Molecular SpectroscopyMax Planck Institute for Polymer Research55128MainzGermany
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29
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Haider A, Ahmed M, Faisal M, Naseer MM. Isatin as a simple, highly selective and sensitive colorimetric sensor for fluoride anion. HETEROCYCL COMMUN 2020. [DOI: 10.1515/hc-2020-0003] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
AbstractHerein, we report the fluoride anion sensing properties of a commercially available and inexpensive organic compound, isatin, which is found to be a highly selective and sensitive sensor. In naked-eye experiments, by addition of fluoride anions, isatin shows a dramatic color change from pale yellow to violet at room temperature, while the addition of other anions, i.e. $\mathrm{Cl}^-,$$\mathrm{Br}^-,\mathrm I^-,\mathrm{ClO}_4^-,{\mathrm H}_2\mathrm{PO}_4^-\,\mathrm{and}\,\mathrm{PF}_6^-,$did not induce any colour change. Additionally, recognition and titration studies have also been done through UV/Vis spectroscopy. Isatin displayed a new absorption band at 533 nm after the addition of fluoride anions, which is presumably due to acid-base interaction between isatin and fluoride anions, while other anions did not trigger noticeable spectral changes. The detection limit was observed to be 0.367 ppm. DFT calculations were also performed to further explain the behavior of receptor 1 towards the Fˉ anion. Owing to high sensitivity and selectivity, isatin can be useful in the detection of biologically or environmentally important fluoride anions at very low concentration.
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Affiliation(s)
- Azeem Haider
- Department of Chemistry, Quaid-i-Azam University-45320, Islamabad, Pakistan
| | - Mukhtiar Ahmed
- Department of Chemistry, Quaid-i-Azam University-45320, Islamabad, Pakistan
| | - Muhammad Faisal
- Department of Chemistry, Quaid-i-Azam University-45320, Islamabad, Pakistan
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30
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Plajer AJ, Lee S, Bond AD, Goodman JM, Wright DS. Charge-assisted phosph(v)azane anion receptors. Dalton Trans 2020; 49:3403-3407. [PMID: 32129399 DOI: 10.1039/d0dt00489h] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Coordination of Cu(i) or Pd(ii) to seleno-cyclodiphosph(v)azanes of the type [RNH(Se)P(μ-NtBu)]2 results in positively charged anion receptor units which have increased anion affinity over the neutral seleno-phosph(v)azanes, due to the increase in electrostatic interactions between the receptor and the guest anions. The same effect is produced by replacement of one of the P[double bond, length as m-dash]Se units by a P-Me+ unit.
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Affiliation(s)
- Alex J Plajer
- Chemistry Department, Cambridge University, Lensfield Road, Cambridge CB2 1EW, UK.
| | - Sanha Lee
- Chemistry Department, Cambridge University, Lensfield Road, Cambridge CB2 1EW, UK.
| | - Andrew D Bond
- Chemistry Department, Cambridge University, Lensfield Road, Cambridge CB2 1EW, UK.
| | - Jonathan M Goodman
- Chemistry Department, Cambridge University, Lensfield Road, Cambridge CB2 1EW, UK.
| | - Dominic S Wright
- Chemistry Department, Cambridge University, Lensfield Road, Cambridge CB2 1EW, UK.
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31
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Plajer AJ, Zhu J, Pröhm P, Rizzuto FJ, Keyser UF, Wright DS. Conformational Control in Main Group Phosphazane Anion Receptors and Transporters. J Am Chem Soc 2020; 142:1029-1037. [PMID: 31877039 DOI: 10.1021/jacs.9b11347] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Anion binding by receptor molecules is a central field of modern chemistry which impacts areas of catalysis as well as biological and materials chemistry. As binding often requires high chemical stability under aerobic and aqueous conditions for practical applications, carbon-based anion receptors have dominated this field, with main group element analogues receiving far less attention. The recent observation that the air- and moisture-stable amino-cyclophosph(V)azanes of the type [RN(E)P(μ-NR)]2 (E = O, S, Se) can exhibit halide binding that is competitive with topologically related organic receptors (such as squaramides and thioureas) has motivated us here to explore how the binding properties of phosphazane receptors can be enhanced further. Coordination of transition metals by the two P,N metal coordination sites of the phosph(III)azane dimer [(2-py)NHP(μ-NtBu)]2 not only activates the receptor for anion binding (by fixing the optimum exo-exo conformation and polarizing the endocyclic N-H substituents) but also stabilizes the P2N2 ring to hydrolysis and oxidation. We show how the binding properties of these receptors can be modulated by the coordinated metal fragments and that they can bind chloride 1 to 2 orders of magnitude stronger than the related squaramides and thioureas. These features can be utilized in anion transport through phospholipid bilayers under aqueous conditions for which transport can be improved by 1 order of magnitude compared to the previous best phosphazane and thiourea transporters. This study demonstrates how careful design of inorganic systems can result in potent supramolecular functionality, beyond that observed for organic counterparts.
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Affiliation(s)
- Alex J Plajer
- Chemistry Department , Cambridge University , Lensfield Road , Cambridge CB2 1EW , U.K
| | - Jinbo Zhu
- Cavendish Laboratory, Department of Physics , Cambridge University , J. J. Thomson Avenue , Cambridge CB3 0HE , U.K
| | - Patrick Pröhm
- Institut für Chemie und Biochemie , Freie Universitaet Berlin Fabeckstr , 34-36 14159 Berlin , Germany
| | - Felix J Rizzuto
- Department of Chemistry , McGill University , 801 Sherbrooke Street W , Montreal , Quebec H3A 0B8 , Canada
| | - Ulrich F Keyser
- Cavendish Laboratory, Department of Physics , Cambridge University , J. J. Thomson Avenue , Cambridge CB3 0HE , U.K
| | - Dominic S Wright
- Chemistry Department , Cambridge University , Lensfield Road , Cambridge CB2 1EW , U.K
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32
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Fan L, Xu T, Feng J, Ji Z, Li L, Shi X, Tian C, Qin Y. Tripodal Squaramide Derivative as a Neutral Chloride Ionophore for Whole Blood and Sweat Chloride Measurement. ELECTROANAL 2020. [DOI: 10.1002/elan.201900693] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Lingling Fan
- Eaglenos, Inc.5th Floor, Building 8 No 11 Yaogu Avenue, Nanjing Jiangbei New Area Nanjing China 210063
| | - Tingting Xu
- Eaglenos, Inc.5th Floor, Building 8 No 11 Yaogu Avenue, Nanjing Jiangbei New Area Nanjing China 210063
| | - Junjun Feng
- Eaglenos, Inc.5th Floor, Building 8 No 11 Yaogu Avenue, Nanjing Jiangbei New Area Nanjing China 210063
| | - Zihan Ji
- Eaglenos, Inc.5th Floor, Building 8 No 11 Yaogu Avenue, Nanjing Jiangbei New Area Nanjing China 210063
| | - Le Li
- Eaglenos, Inc.5th Floor, Building 8 No 11 Yaogu Avenue, Nanjing Jiangbei New Area Nanjing China 210063
| | - Xinhao Shi
- Eaglenos, Inc.5th Floor, Building 8 No 11 Yaogu Avenue, Nanjing Jiangbei New Area Nanjing China 210063
| | - Chunxiu Tian
- Eaglenos, Inc.5th Floor, Building 8 No 11 Yaogu Avenue, Nanjing Jiangbei New Area Nanjing China 210063
| | - Yu Qin
- Eaglenos, Inc.5th Floor, Building 8 No 11 Yaogu Avenue, Nanjing Jiangbei New Area Nanjing China 210063
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33
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Koohgard M, Hosseini-Sarvari M. Black TiO2 nanoparticles with efficient photocatalytic activity under visible light at low temperature: regioselective C–N bond cleavage toward the synthesis of thioureas, sulfonamides, and propargylamines. Catal Sci Technol 2020. [DOI: 10.1039/d0cy01256d] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Several different colored forms of TiO2 were prepared through the easy treatment of white TiO2 and NaBH4 as a safe hydrogen source. Then, tertiary amines were harnessed toward the regioselective synthesis of three prominent scaffolds.
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Affiliation(s)
- Mehdi Koohgard
- Department of Chemistry
- Faculty of Science
- Shiraz University
- Shiraz
- 7194684795 I.R. Iran
| | - Mona Hosseini-Sarvari
- Department of Chemistry
- Faculty of Science
- Shiraz University
- Shiraz
- 7194684795 I.R. Iran
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34
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Orenha RP, Nagurniak GR, Colaço MC, Caramori GF, Piotrowski MJ, de Araújo Batista KE, Muñoz-Castro A, de Almeida Silva B, Esteves BJ, Parreira RLT. The simultaneous recognition mechanism of cations and anions using macrocyclic–iodine structures: insights from dispersion-corrected DFT calculations. Phys Chem Chem Phys 2020; 22:23795-23803. [DOI: 10.1039/d0cp04291a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The design of structures to recognize ions is growing in recent years. Here, the simultaneous recognition of cations and anions by a macrocycle comprising a simple crown ether and an iodine-triazole unit has been investigated using DFT calculations.
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Affiliation(s)
- Renato Pereira Orenha
- Núcleo de Pesquisas em Ciências Exatas e Tecnológicas
- Universidade de Franca
- Franca
- Brazil
| | - Glaucio Régis Nagurniak
- Universidade Federal de Santa Catarina
- Departamento de Ciências Exatas e da Educação
- Blumenau
- Brazil
| | - Matheus Cachoeira Colaço
- Departamento de Química
- Universidade Federal de Santa Catarina, Campus Universitário Trindade
- Florianópolis
- Brazil
| | - Giovanni Finoto Caramori
- Departamento de Química
- Universidade Federal de Santa Catarina, Campus Universitário Trindade
- Florianópolis
- Brazil
| | | | | | - Alvaro Muñoz-Castro
- Laboratorio de Química Inorgánica y Materiales Moleculares
- Facultad de Ingenieria
- Universidad Autonoma de Chile
- Llano Subercaceaux
- San Miguel
| | | | - Benjamim José Esteves
- Núcleo de Pesquisas em Ciências Exatas e Tecnológicas
- Universidade de Franca
- Franca
- Brazil
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35
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Koohgard M, Sarvestani AM, Hosseini-Sarvari M. Photocatalytic synthesis of unsymmetrical thiourea derivatives via visible-light irradiation using nitrogen-doped ZnO nanorods. NEW J CHEM 2020. [DOI: 10.1039/d0nj02197k] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
N-ZnO as a photocatalyst under visible-light irradiation promoted an environmentally friendly route for the synthesis of unsymmetrical thiourea derivatives.
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Affiliation(s)
- Mehdi Koohgard
- Department of Chemistry
- Faculty of Science
- Shiraz University
- Shiraz, I.R
- Iran
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36
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Development of a Library of Thiophene‐Based Drug‐Like Lego Molecules: Evaluation of Their Anion Binding, Transport Properties, and Cytotoxicity. Chemistry 2019; 26:888-899. [DOI: 10.1002/chem.201904255] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Indexed: 12/15/2022]
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37
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Burade SS, Pawar SV, Saha T, Kumbhar N, Kotmale AS, Ahmad M, Talukdar P, Dhavale DD. Sugar-derived oxazolone pseudotetrapeptide as γ-turn inducer and anion-selective transporter. Beilstein J Org Chem 2019; 15:2419-2427. [PMID: 31666876 PMCID: PMC6808195 DOI: 10.3762/bjoc.15.234] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2019] [Accepted: 09/23/2019] [Indexed: 12/02/2022] Open
Abstract
The intramolecular cyclization of a C-3-tetrasubstituted furanoid sugar amino acid-derived linear tetrapeptide afforded an oxazolone pseudo-peptide with the formation of an oxazole ring at the C-terminus. A conformational study of the oxazolone pseudo-peptide showed intramolecular C=O···HN(II) hydrogen bonding in a seven-membered ring leading to a γ-turn conformation. This fact was supported by a solution-state NMR and molecular modeling studies. The oxazolone pseudotetrapeptide was found to be a better Cl−-selective transporter for which an anion–anion antiport mechanism was established.
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Affiliation(s)
- Sachin S Burade
- Garware Research Center, Department of Chemistry, Savitribai Phule Pune University (formerly University of Pune), Pune 411007, India
| | - Sushil V Pawar
- Garware Research Center, Department of Chemistry, Savitribai Phule Pune University (formerly University of Pune), Pune 411007, India
| | - Tanmoy Saha
- Indian Institute of Science Education and Research, Pune, Pune 411008, India
| | - Navanath Kumbhar
- Garware Research Center, Department of Chemistry, Savitribai Phule Pune University (formerly University of Pune), Pune 411007, India
| | - Amol S Kotmale
- Garware Research Center, Department of Chemistry, Savitribai Phule Pune University (formerly University of Pune), Pune 411007, India
| | - Manzoor Ahmad
- Indian Institute of Science Education and Research, Pune, Pune 411008, India
| | - Pinaki Talukdar
- Indian Institute of Science Education and Research, Pune, Pune 411008, India
| | - Dilip D Dhavale
- Garware Research Center, Department of Chemistry, Savitribai Phule Pune University (formerly University of Pune), Pune 411007, India
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38
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Ding Y, Williams NH, Hunter CA. A Synthetic Vesicle-to-Vesicle Communication System. J Am Chem Soc 2019; 141:17847-17853. [PMID: 31642667 DOI: 10.1021/jacs.9b09102] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A molecular signal displayed on the external surface of one population of vesicles was used to trigger a catalytic process on the inside of a second population of vesicles. The key recognition event is the transfer of a protein (NeutrAvidin) bound to vesicles displaying desthiobiotin to vesicles displaying biotin. The desthiobiotin-protein complex was used to anchor a synthetic transducer in the outer leaflet of the vesicles, and when the protein was displaced, the transducer translocated across the bilayer to expose a catalytic headgroup to the internal vesicle solution. As a result, an ester substrate encapsulated on the inside of this second population of vesicles was hydrolyzed to give a fluorescence output signal. The protein has four binding sites, which leads to multivalent interactions with membrane-anchored ligands and very high binding affinities. Thus, biotin, which has a dissociation constant 3 orders of magnitude higher than desthiobiotin, did not displace the protein from the membrane-anchored transducer, and membrane-anchored biotin displayed on the surface of a second population of vesicles was required to generate an effective input signal.
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Affiliation(s)
- Yudi Ding
- Department of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom
| | - Nicholas H Williams
- Department of Chemistry , University of Sheffield , Sheffield S3 7HF , United Kingdom
| | - Christopher A Hunter
- Department of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom
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39
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Plajer AJ, Zhu J, Proehm P, Bond AD, Keyser UF, Wright DS. Tailoring the Binding Properties of Phosphazane Anion Receptors and Transporters. J Am Chem Soc 2019; 141:8807-8815. [DOI: 10.1021/jacs.9b00504] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Alex J. Plajer
- Chemistry Department, Cambridge University, Lensfield Road, Cambridge CB2 1EW, U.K
| | - Jinbo Zhu
- Cavendish Laboratory, Department of Physics, Cambridge University, J. J. Thomson Avenue, Cambridge CB3 0HE, U.K
| | - Patrick Proehm
- Institut fuer Chemie und Biochemie, Freie Universitaet Berlin, Fabeckstraße 34-36 14159 Berlin, Germany
| | - Andrew D. Bond
- Chemistry Department, Cambridge University, Lensfield Road, Cambridge CB2 1EW, U.K
| | - Ulrich F. Keyser
- Cavendish Laboratory, Department of Physics, Cambridge University, J. J. Thomson Avenue, Cambridge CB3 0HE, U.K
| | - Dominic S. Wright
- Chemistry Department, Cambridge University, Lensfield Road, Cambridge CB2 1EW, U.K
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40
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Dey SK, Hernández BG, D'Souza M, Mhaldar SN, Gobre VV, Dhuri SN. Anion Selective Disruption of Strong Intramolecular –NH⋅⋅⋅O=C Hydrogen Bonds in a Nonchromogenic Tripodal Benzoylthiourea Receptor to Display Colorimetric Response. ChemistrySelect 2019. [DOI: 10.1002/slct.201803577] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Sandeep Kumar Dey
- Department of ChemistryGoa University, Taleigao Plateau Goa 403206 India
| | - Beatriz Gil Hernández
- Departmento de QuímicaFacultad de Ciencias, Sección QuímicaUniversidad de La Laguna 38206 La Laguna, Tenerife Spain
| | - Milagrina D'Souza
- Department of ChemistryGoa University, Taleigao Plateau Goa 403206 India
| | | | | | - Sunder N. Dhuri
- Department of ChemistryGoa University, Taleigao Plateau Goa 403206 India
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41
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Guo Z, Niu Q, Yang Q, Li T, Chi H. A highly selective and sensitive dual-mode sensor for colorimetric and turn-on fluorescent detection of cyanide in water, agro-products and living cells. Anal Chim Acta 2019; 1065:113-123. [PMID: 31005143 DOI: 10.1016/j.aca.2019.03.024] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2018] [Revised: 03/09/2019] [Accepted: 03/12/2019] [Indexed: 12/27/2022]
Abstract
A new highly selective and sensitive dual-mode sensor 3TD based on the conjugate of oligothiophene and barbituric acid moiety was developed for colorimetric and turn-on fluorescent detection of CN─. The sensor 3TD exhibited high specificity towards CN─ by interrupting its own ICT producing thereupon a large blue-shift in UV-Vis spectrum and remarkable "turn-on" fluorescence emission. The detection limit was 2.26 × 10─7 M, which is quite lower than the permissible level of CN─ in drinking water according to the WHO. The fluorescent detection of CN─ was well demonstrated by filter paper strips and silica coated TLC plates. Moreover, the sensor was also used to detect CN─ in environmental water and agro-products with satisfactory results. Most importantly, in terms of these advantages of colorimetric and turn-on fluorescent dual-mode, immediate response, excellent selectivity, high sensitivity, low cytotoxicity, and good biocompatibility, the sensor 3TD was successfully applied into CN- imaging in living cells, demonstrating its excellent value in practical application.
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Affiliation(s)
- Zongrang Guo
- Shandong Provincial Key Laboratory of Molecular Engineering, School of Chemistry and Pharmaceutical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, People's Republic of China
| | - Qingfen Niu
- Shandong Provincial Key Laboratory of Molecular Engineering, School of Chemistry and Pharmaceutical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, People's Republic of China.
| | - Qingxin Yang
- Shandong Provincial Key Laboratory of Molecular Engineering, School of Chemistry and Pharmaceutical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, People's Republic of China
| | - Tianduo Li
- Shandong Provincial Key Laboratory of Molecular Engineering, School of Chemistry and Pharmaceutical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, People's Republic of China
| | - Hong Chi
- Shandong Provincial Key Laboratory of Molecular Engineering, School of Chemistry and Pharmaceutical Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, People's Republic of China
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42
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Martínez-Crespo L, Sun-Wang JL, Ferreira P, Mirabella CFM, Aragay G, Ballester P. Influence of the Insertion Method of Aryl-Extended Calix[4]pyrroles into Liposomal Membranes on Their Properties as Anion Carriers. Chemistry 2019; 25:4775-4781. [PMID: 30830693 PMCID: PMC6593748 DOI: 10.1002/chem.201806169] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Indexed: 01/02/2023]
Abstract
We disclose the results of our investigations on the influence that the insertion method of aryl-extended calix[4]pyrrole into liposomal membranes exerts on their properties as anion carriers. We use the standard HPTS assay to assess the transport properties of the carriers. We show that the post-insertion of the carrier, as DMSO solution, assigns better transport activities to the "two-wall" α,α-aryl-extended calix[4]pyrrole 1 compared to the "four-wall" α,α,α,α-counterpart 2. Notably, opposite results were obtained when the carriers were pre-inserted into the liposomal membranes. We assign this difference to an improved incorporation of carrier 2 into the membrane when delivered by the pre-insertion method. On the other hand, carrier 1 shows comparable levels of transport independently of the method used for its incorporation. Thus, an accurate comparison of the chloride transport activities featured by these two carriers demands their pre-incorporation in the liposomal membranes. In contrast, using the lucigenin assay with the pre-insertion method both carriers displayed similar transport efficiencies.
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Affiliation(s)
- Luis Martínez-Crespo
- Institute of Chemical Research of Catalonia (ICIQ), The Barcelona Institute of Science and Technology, Avgda. Països Catalans 16, 43007, Tarragona, Spain
| | - Jia Liang Sun-Wang
- Institute of Chemical Research of Catalonia (ICIQ), The Barcelona Institute of Science and Technology, Avgda. Països Catalans 16, 43007, Tarragona, Spain
| | - Pedro Ferreira
- Institute of Chemical Research of Catalonia (ICIQ), The Barcelona Institute of Science and Technology, Avgda. Països Catalans 16, 43007, Tarragona, Spain.,Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili, c/Marcel⋅lí Domingo, 1, 43007, Tarragona, Spain
| | - Chiara F M Mirabella
- Institute of Chemical Research of Catalonia (ICIQ), The Barcelona Institute of Science and Technology, Avgda. Països Catalans 16, 43007, Tarragona, Spain.,Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili, c/Marcel⋅lí Domingo, 1, 43007, Tarragona, Spain
| | - Gemma Aragay
- Institute of Chemical Research of Catalonia (ICIQ), The Barcelona Institute of Science and Technology, Avgda. Països Catalans 16, 43007, Tarragona, Spain
| | - Pablo Ballester
- Institute of Chemical Research of Catalonia (ICIQ), The Barcelona Institute of Science and Technology, Avgda. Països Catalans 16, 43007, Tarragona, Spain.,ICREA, Pg. Lluís Companys, 23, 08018, Barcelona, Spain
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43
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Bąk KM, Chabuda K, Montes H, Quesada R, Chmielewski MJ. 1,8-Diamidocarbazoles: an easily tuneable family of fluorescent anion sensors and transporters. Org Biomol Chem 2019; 16:5188-5196. [PMID: 29971303 DOI: 10.1039/c8ob01031e] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
The synthesis, structure and anion recognition properties of an extensive, rationally designed series of bisamide derivatives of 1,8-diaminocarbazole and 1,8-diamino-3,6-dichlorocarbazole are described. Despite simple structures and the presence of only three hydrogen bond donors, such compounds are remarkably strong and selective receptors for oxyanions in DMSO + 0.5%H2O. Owing to their carbazole fluorophore, they are also sensitive turn-on fluorescent sensors for H2PO4- and AcO-, with a more than 15-fold increase in fluorescence intensity upon binding. Despite relatively weak chloride affinity, some of the diamidocarbazoles have also been shown, for the first time, to be very active chloride transporters through lipid bilayers. The binding, sensing and transport properties of these receptors can be easily modulated by the usually overlooked variations in the length and degree of branching of their alkyl side arms. Overall, this study demonstrates that the 1,8-diamidocarbazole binding unit is a very promising and synthetically versatile platform for the development of fluorescent sensors and transporters for anions.
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Affiliation(s)
- Krzysztof M Bąk
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089 Warszawa, Poland.
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44
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Rather IA, Wagay SA, Hasnain MS, Ali R. New dimensions in calix[4]pyrrole: the land of opportunity in supramolecular chemistry. RSC Adv 2019; 9:38309-38344. [PMID: 35540221 PMCID: PMC9076024 DOI: 10.1039/c9ra07399j] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2019] [Accepted: 11/06/2019] [Indexed: 01/05/2023] Open
Abstract
The quest for receptors endowed with the selective complexation and detection of negatively charged species continues to receive substantial consideration within the scientific community worldwide. This study is encouraged by the utilization of anions in nature in a plethora of biological systems such as chloride channels and proteins and as polyanions for genetic information. The molecular recognition of anionic species is greatly interesting in terms of their favourable interactions. In this comprehensive review, in addition to giving accounts of some selected syntheses, we illustrated diverse applications ranging from molecular containers to ion transporters and drug carriers of a supramolecular receptor named calix[4]pyrrole. We believe that the present review may act as a catalyst in enhancing the novel applications of calix[4]pyrrole and its congeners in the other dimensions of science and technology. The quest for receptors endowed with the selective complexation and detection of negatively charged species continues to receive substantial consideration within the scientific community worldwide.![]()
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Affiliation(s)
| | | | | | - Rashid Ali
- Department of Chemistry
- Jamia Millia Islamia
- New Delhi-110025
- India
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45
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Dutta S, Mondal M, Ghosh T, Saha A. Unprecedented thiocarbamidation of nitroarenes: a facile one-pot route to unsymmetrical thioureas. Org Chem Front 2019. [DOI: 10.1039/c8qo00752g] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
A one-pot synthesis of unsymmetrical thiourea compounds was achieved by the reaction of nitroarenes with in situ generated dithiocarbamate anions.
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Affiliation(s)
- Soumya Dutta
- Department of Chemistry
- Jadavpur University
- Kolkata 700032
- India
| | - Manas Mondal
- Department of Chemistry
- Jadavpur University
- Kolkata 700032
- India
| | - Tubai Ghosh
- Department of Organic Chemistry
- Indian Association for the Cultivation of Science
- Kolkata 700032
- India
| | - Amit Saha
- Department of Chemistry
- Jadavpur University
- Kolkata 700032
- India
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46
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Baulina TV, Kudryavtsev IY, Smolyakov AF, Pasechnik MP, Brel VK. Synthesis and molecular structure of functionalized tris[2-(4′-substituted butoxyphenyl)]phosphine oxides as precursors of tripodal ligands. HETEROATOM CHEMISTRY 2018. [DOI: 10.1002/hc.21454] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Tat'yana V. Baulina
- Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
| | - Igor Yu. Kudryavtsev
- Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
| | - Alexander F. Smolyakov
- Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
- Faculty of Science; RUDN University; Moscow Russia
| | - Margarita P. Pasechnik
- Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
| | - Valery K. Brel
- Nesmeyanov Institute of Organoelement Compounds; Russian Academy of Sciences; Moscow Russia
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47
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Kokan Z, Chmielewski MJ. A Photoswitchable Heteroditopic Ion-Pair Receptor. J Am Chem Soc 2018; 140:16010-16014. [DOI: 10.1021/jacs.8b08689] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Zoran Kokan
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089 Warszawa, Poland
- Division of Materials Chemistry, Rud̵er Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia
| | - Michał J. Chmielewski
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Żwirki i Wigury 101, 02-089 Warszawa, Poland
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48
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Zhan YY, Kojima T, Nakamura T, Takahashi T, Takahashi S, Haketa Y, Shoji Y, Maeda H, Fukushima T, Hiraoka S. Induced-fit expansion and contraction of a self-assembled nanocube finely responding to neutral and anionic guests. Nat Commun 2018; 9:4530. [PMID: 30382098 PMCID: PMC6208372 DOI: 10.1038/s41467-018-06874-y] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Accepted: 09/27/2018] [Indexed: 01/03/2023] Open
Abstract
Induced-fit or conformational selection is of profound significance in biological regulation. Biological receptors alter their conformation to respond to the shape and electrostatic surfaces of guest molecules. Here we report a water-soluble artificial molecular host that can sensitively respond to the size, shape, and charged state of guest molecules. The molecular host, i.e. nanocube, is an assembled structure consisting of six gear-shaped amphiphiles (GSAs). This nanocube can expand or contract its size upon the encapsulation of neutral and anionic guest molecules with a volume ranging from 74 to 535 Å3 by induced-fit. The responding property of this nanocube, reminiscent of a feature of biological molecules, arises from the fact that the GSAs in the nanocubes are connected to each other only through the hydrophobic effect and very weak intermolecular interactions such as van der Waals and cation-π interactions.
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Affiliation(s)
- Yi-Yang Zhan
- Department of Basic Science, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo, 153-8902, Japan
| | - Tatsuo Kojima
- Department of Basic Science, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo, 153-8902, Japan
| | - Takashi Nakamura
- Department of Basic Science, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo, 153-8902, Japan
- Division of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8571, Japan
| | - Toshihiro Takahashi
- Department of Basic Science, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo, 153-8902, Japan
| | - Satoshi Takahashi
- Department of Basic Science, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo, 153-8902, Japan
| | - Yohei Haketa
- Department of Applied Chemistry, College of Life Sciences, Ritsumeikan University, 1-1-1 Noji-higashi, Kusatsu, Shiga, 525-8577, Japan
| | - Yoshiaki Shoji
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 226-8503, Japan
| | - Hiromitsu Maeda
- Department of Applied Chemistry, College of Life Sciences, Ritsumeikan University, 1-1-1 Noji-higashi, Kusatsu, Shiga, 525-8577, Japan
| | - Takanori Fukushima
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 226-8503, Japan
| | - Shuichi Hiraoka
- Department of Basic Science, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo, 153-8902, Japan.
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49
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Yang JH, Lynch VM, Sessler JL, Kim SK. Cesium Halide Ion Pair Recognition by a Pyrrole Strapped Calix[4]pyrrole. Supramol Chem 2018; 31:203-210. [PMID: 32523324 PMCID: PMC7286541 DOI: 10.1080/10610278.2018.1535711] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Accepted: 10/05/2018] [Indexed: 10/28/2022]
Abstract
The binding properties of the pyrrole-strapped calix[4]pyrrole 2 for cesium halide ion pairs were studied via 1H NMR spectroscopic and single crystal X-ray diffraction analyses. Receptor 2 was found to bind CsF, CsCl, and CsBr in the solid state and in chloroform/methanol (4/1, v/v) solution with relatively high affinity as compared with the parent calix[4]pyrrole 1. It was also revealed by solid-liquid extraction experiments that receptor 2 was capable of solubilizing CsF in CDCl3, a medium in which this salt is otherwise insoluble. Single crystal X-ray diffraction analyses and 1H NMR spectroscopic data recorded in 20% CD3OD in CDCl3 provide support for the suggestion that the strap pyrrolic NH proton of 2, as well as those of the calix[4]pyrrole framework, contribute to anion recognition, thus increasing affinity for cesium halide salts relative to the parent system 1. In the solid state, receptor 2 interacts with CsF to form a two dimensional coordination polymer in the presence of methanol. A linear coordination polymer is observed in the case of CsCl and CsBr. Receptor 2 was also found to form a complex with CsF in chloroform/methanol (4/1, v/v) solution, albeit with a different binding mode than is seen in the solid state.
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Affiliation(s)
- Ju Ho Yang
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju, 660-701, Korea
| | - Vincent M Lynch
- Department of Chemistry, The University of Texas at Austin, 105 E. 24, Street-Stop A5300, Austin, Texas 78712-1224
| | - Jonathan L Sessler
- Department of Chemistry, The University of Texas at Austin, 105 E. 24, Street-Stop A5300, Austin, Texas 78712-1224
| | - Sung Kuk Kim
- Department of Chemistry and Research Institute of Natural Science, Gyeongsang National University, Jinju, 660-701, Korea
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50
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Chi X, Peters GM, Brockman C, Lynch VM, Sessler JL. Controlling Structure Beyond the Initial Coordination Sphere: Complexation-Induced Reversed Micelle Formation in Calix[4]pyrrole-Containing Diblock Copolymers. J Am Chem Soc 2018; 140:13219-13222. [DOI: 10.1021/jacs.8b09620] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xiaodong Chi
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street−A5300, Austin, Texas 78712-1224, United States
| | - Gretchen M. Peters
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street−A5300, Austin, Texas 78712-1224, United States
| | - Chandler Brockman
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street−A5300, Austin, Texas 78712-1224, United States
| | - Vincent M. Lynch
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street−A5300, Austin, Texas 78712-1224, United States
| | - Jonathan L. Sessler
- Department of Chemistry, The University of Texas at Austin, 105 East 24th Street−A5300, Austin, Texas 78712-1224, United States
- Center for Supramolecular Chemistry and Catalysis, Shanghai University, Shanghai 200444, China
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